mRNA_L-elsbetiae_contig1367.2790.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1367.2790.1
Unique NamemRNA_L-elsbetiae_contig1367.2790.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 2.060e-41
Identity = 228/424 (53.77%), Postives = 273/424 (64.39%), Query Frame = 2
Query:   35 PRGPCNNLHGAVMHGSAELTAAIIASGSVNIDQGDPMGSTPLMYCSLKGYTPVARVLLDRGADVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDHAGVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAAGKRAYVN-TRNTAGITPLIGTIWGGCPGAPRVARLLIDAGADTEACASVPGM---VYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAPSA--PLARMLPTLRRRAGNRGVLLADLFRYVKK 1288
            PRGP N LH A  HGSA+   A++++GSV+I+QG+P G TPLM  + KG++ VA+ LL++GA+VS     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                +   GV+GCGG S G ++LRLAA EQ++DIM IL   GVVDTG  AL  AA+Y    SVK L    AGG      YVN T +  G TPL+ TI      +PR+AR LID GADT++   V        SR TPL F    L   K+ G+ ATE+QLR+L+A+ RLL ++ AVHAVSWLW   D P     AV   ++R +  +A   L RM   LR   G RGV+L  ++R  ++
Sbjct:   29 PRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKSLLEKGANVSVAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQHGHSEVVREL------------------IQQLGVRGCGGVSAGVESLRLAATEQYVDIMGILTVGGVVDTGR-ALVVAAEYSREESVKFLLQHQAGGGTW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDDGADTKSTVLVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNATEEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTP--IGHAVGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYRAAEE 428          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 150 bits (379), Expect = 2.810e-35
Identity = 226/431 (52.44%), Postives = 272/431 (63.11%), Query Frame = 2
Query:   38 RGPCNNLHGAVMHGSAELTAAIIAS-GSVNIDQGDPMGSTPLMYCSLKGYTPVARVLLDRGADVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----VDHAGVKGCGGDSCGAQALRLAAEEQHIDIMIILV-AAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAAGKRAYVN-TRNTAGITPLIGTIWGGCPG--APRVARLLIDAGADTEACASV----PGMVYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAV-AEGATREQAPSAPLARMLPTLRRRAGNRGVLLADLFRYVKK 1288
            RGP N LH A   GS E+T AI++S G+ +ID G+P  +T LM  ++KGY  V   LL +GA+VSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                       +   G++GCGG S G +ALR AA+E+H++ M +L+ A GVVDTG  AL  AA+ G   +VK L  +     A   AYVN TR+  G TP++  +  G     +P++ RLL+DAGA+T     V    P    +  TPL F   LL   ++ GE AT++QL+ L+  R LL R  AVHAVSWLWA  + PRIA+ A   +  T   A + PL  M P LRR+ G RGVLL  LFRY +K
Sbjct:    9 RGPMNALHKAAWDGSVEMTGAILSSRGAPDIDLGNPSAATALMIATVKGYAGVVNALLSKGANVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLLRAKANPLLCSHTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADEEHLEFMAVLLDAGGVVDTGP-ALILAAENGRAVAVKFLLRRRQ---ADADAYVNGTRDPYGRTPVMCAVDVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDGEAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAGDTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYSRK 435          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.240e-34
Identity = 189/432 (43.75%), Postives = 231/432 (53.47%), Query Frame = 2
Query:   29 RRPRGPCNNLHGAVMHGSAELTAAIIASGSVNIDQGDPMGSTPLMYCSLKGYTPVARVLLDRGADVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------VDHAGVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQC-AGGAAGKRAYVNTRNTAGITPLIGTIWGGCPGAPRVARLLIDAGADTEACASVPGMVYSRG---TPLIFVITLLHMK-KIKGE-PATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAPSAPLARMLPTLRRRAGNRGVLLADLFRYVKK 1288
            +RPRGP N LH A   GS E TA ++ASG+ +IDQG+  G T LM  S  GY  +  ++L++GA VS  XXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXXXXXXXXXXXXXXXXXX                                                                  +   G+ GCGG S G +AL+ AA+ ++++IM+IL  AGVVDTG +AL  AA YG    +K L +Q  A     + AYVNTR+  G+TPL+   WG     PRV RLL++AGADT +  +V   +       TPL   +  +  K K+ G  PA+ +QL  LEA+RRLLLRV AVHAVSWLW  D +     RA A G  R  A S  +   +   RRRA  R V LA L RY  K
Sbjct:    9 QRPRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXXXXNLNSRRSDGATPLYTAAWKGNVDAARLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTG-LALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLL---WGIQHYRPRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLWPSDIST--ITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSK 434          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 3.030e-34
Identity = 151/426 (35.45%), Postives = 185/426 (43.43%), Query Frame = 2
Query:   50 NNLHGAVMHGSAELTAAIIASGSVNIDQGDPMGSTPLMYCSLKGYTPVARVLLDRGADVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVD-------HAGVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQC--AGGAAGKRAYVNTRNTAGITPLIGTIWGGCPGAPRVARLLIDAGADTEACASV---PGMVYSRGTPLIFVITLLHMKKIK-GEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAPSAPLARMLPTLRRRAGNRGVLLADLFRYVKK 1288
            N LH AV+ GSAELT A++A G+V IDQ +  G+TPLM     G++ +A++L+ +GA+VS                                                    XXXXXXXXXXXXX                                                            D         G++GC   S GA AL  AA  QH+DIM IL  AGVVDTG  AL  AA  G   SVK L       GG   + AY+N R+  G TPL+    G    APR+ R+L+DAGADT +   V    G V    TPL F    L  K +  G+PAT++ L+ LEA+ RLLLRV AVHAVSWLW    AP I R       T  + P   L  MLP L+RR   R  L+A L RY  K
Sbjct:  107 NQLHRAVLVGSAELTQAVLAGGTVEIDQRNSYGATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGK-ALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQAPRIVRMLVDAGADTTSPVQVMNLKGGVVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLWP-SGAPFIGRATE----TDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYSVK 526          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 141 bits (356), Expect = 3.130e-32
Identity = 207/435 (47.59%), Postives = 250/435 (57.47%), Query Frame = 2
Query:   20 LQRRRPRGPCNNLHGAVMHGSAELTAAIIASGSVNIDQGDPMGSTPLMYCSLKGYTPVARVLLDRGADVSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVD---HAGVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAAGKRAYVNT-RNTAGITPLIGTIWGGCPGA--PRVARLLIDAGADTEACASV---PGMVYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAPS--APLAR-MLPTLRRRAGNRGVLLADLFRYVKK 1288
            L ++ PR   N LH A   GS  LTAAI+++GS++ID GD  G TPLM+     +  V  +LL +GA VS                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                ++     G++GCGG + G  AL+LAA + H+D+M+ L  AGVVDTG +AL  A  +G +  VK L  Q  G  + K AYV+  R+  G TPLI  I  G   +  P+V RLL+DAGADT +       PG +    TPL      L +K    +   ++ LR LE +RRLLLRV AVHA SWLW  +  PR+   A    AT  ++ S  AP  R +LP LRRRA  RG + A L RY  K
Sbjct:    6 LLQQSPRVVINKLHEAARDGSTWLTAAILSTGSIDIDGGDSSGGTPLMHAICNDHPSVVSILLSKGASVSAINDEGNTALHLSAFAGYVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTRVNLAWQHLPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAMKPHMDVMLALTTAGVVDTG-IALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNIDVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVCTPLSLATEALRIKIAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQ-NGVPRVGLPAGGTAATETESSSTTAPQLRTVLPILRRRARGRGFVSASLCRYAVK 438          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 2.300e-30
Identity = 103/224 (45.98%), Postives = 128/224 (57.14%), Query Frame = 2
Query:  614 GVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAAGKRAYVN-TRNTAGITPLIGTIWGGCPGAPRVARLLIDAGADTEACASVPGM---VYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAP---SAPLARMLPT-LRRRAGNRGVLL 1261
            GV+GCGG S G ++LRLA  EQ +DIM IL   GVVDTG  AL  AA+     SVK L    AGG A    YVN T +  G TPL+ TI      +PR+AR LIDA ADT++   V        SR TPL F    L   K+  + ATE+QLR+L+A+ RLL +V AVHAVSWLW   D     R + A GA   +     + PL + +PT LR   G RGV++
Sbjct:  194 GVRGCGGVSGGVESLRLATTEQDVDIMGILTVGGVVDTGR-ALVVAAENSREESVKFLLQHQAGGGAW---YVNNTLDPFGRTPLVCTIEACGSSSPRIARFLIDAEADTKSTVLVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNATEEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDT----RNSYAVGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI)

HSP 1 Score: 124 bits (311), Expect = 3.340e-28
Identity = 90/204 (44.12%), Postives = 111/204 (54.41%), Query Frame = 2
Query:  677 QHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAA-GKRAYVNTRNTAGITPLIGTIWGGCPGAPRVARLLIDAGADTEACASVP---GMVYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAPSAPLARMLPTLRRRAGNRGVLLADLFR 1276
            QH+DIM IL  AGV D     L G A  G   SV+ L  Q    +     AY N+ + +G+TPL  +I     G PR+ RLL+DAGADT +   V    G V    TPL    +LL  K + G+PATE+QL  L+A+RRLLLRV AVHAVSWLW   DAP I            + P  PL+  LP L+RRA    V +A L R
Sbjct:    3 QHMDIMAILTGAGVRDAMGYVLLGTAGLGREASVQFLLRQRRKESEMSVHAYANSSDGSGMTPLSCSIEWCSSGNPRIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQAIRRLLLRVDAVHAVSWLWP-SDAPSIVHAVERSCGPEPRRP--PLSLTLPILKRRAKTCHVFVATLLR 203          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.410e-27
Identity = 101/240 (42.08%), Postives = 129/240 (53.75%), Query Frame = 2
Query:  602 VDHAGVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAAGKRAYVNTRNTAGITPLIGTIWGGC-----PGAPRVARLLIDAGADTEA---CASVPGMVYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAI---DDAPRIARRAVAEGATREQAPSAPLARMLPTLRRRAGNRGVLLADLFRYVKK 1288
            +   G++GCGG S G  AL +A E + +  M +L  AGVVDTG  AL  +A  G   SVK L    A    G  AYVN R+  G TPL+ +I+  C        PRVARLL++AGADT       +  G+V    TPL   + +L  KK+ G   ++Q+L  LE +RRLLL+V AVHA SWLW     D   R    A    AT   AP   L R+LP LRRRA   GV+   L R+ +K
Sbjct:  189 IQRVGIEGCGGQSRGEVALLMAGEGRRVAAMALLTHAGVVDTGQ-ALTISAGLGREASVKYLLQNHAK-HYGPGAYVNVRDRNGTTPLLSSIYV-CGVDEQSSFPRVARLLVEAGADTTTELRRTNSMGVVLFSCTPLKLTVHILQDKKVDGTYISKQRLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRPDNAAEVTTATNAAAPK--LGRVLPILRRRARRPGVVWTALCRHQRK 423          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE)

HSP 1 Score: 127 bits (318), Expect = 2.050e-26
Identity = 93/244 (38.11%), Postives = 133/244 (54.51%), Query Frame = 2
Query:  602 VDHAGVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAAGKRAYVNTRNTAGITPLIGTIWGGC-PGAPRVARLLIDAGADTEACASVP---GMVYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAP---SAPLARMLPTLRRRAGNRGVLLADLFRYVKKR*PSRDMR 1312
            +   G++GCGG S GA A R A + Q  DI+++L   G +DTG V +  AA +G    VK+L  Q  G       YVN +   G TP++  I      G+PRV RL +DAGADT +   +    G+   RGTPL +   LL  ++ +G  +T+ +  +LEAVRR+LL++ A+ AVSW W  D    I  RAV +G  R ++      PL   LP  RR+A  R VL+  + RY +K   SR+ +
Sbjct:  366 IQQLGIQGCGGASAGADASRWAVQTQQYDIVVMLADTGEIDTGRVLID-AAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGRTPVVCRIGRALRSGSPRVLRLFLDAGADTASTVRITNKEGVQLFRGTPLAYTTWLLRDQQARGIDSTKGEPCSLEAVRRMLLQLEAIRAVSWCWQSDALSSI-ERAVQDGRPRAKSRLTVDTPLGLTLPR-RRKARARRVLVMAMSRYSRKPMSSREYK 606          
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 9.180e-26
Identity = 97/231 (41.99%), Postives = 128/231 (55.41%), Query Frame = 2
Query:  614 GVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYGLVRSVKLLFDQCAGGAAGKRAYVN-TRNTAGITPLIGTIWGGC--PGAPRVARLLIDAGADTEACASVPGM---VYSRGTPLIFVITLLHMKKIKGEPATEQQLRALEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAPSAPLARMLPTLRRRAGNRGVLLADLFRYVKK 1288
            G++ CGG S G  ALR+AA    +DIM +L+ AGVVD   +AL  A   G   +V  L  Q       + +YVN  R+  G+T L+ +  G    P  PR+ R L+DAGADT +   +           TPL +V      +     PAT++QL  LEA RR+LLRV AVHAVSW+W   DAP +AR A +   T + +P+  L  +LP LRRRAG R +L   LFRY KK
Sbjct:  180 GIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQE--ERWQTSYVNIARDDDGLTALLWSFRGNKNKPCNPRITRRLVDAGADTTSAVQLRAKRSRTCVNVTPLEYVNDWALRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWP-SDAPLLARPANSPR-TAKHSPTQ-LTTVLPVLRRRAGRRALLWDTLFRYSKK 405          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1367.2790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U9_ECTSI2.060e-4153.77EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI2.810e-3552.44EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5KJA9_9PHAE1.240e-3443.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI3.030e-3435.45EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVK3_ECTSI3.130e-3247.59EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE2.300e-3045.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSC5_ECTSI3.340e-2844.12EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D8LJF9_ECTSI1.410e-2742.08EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KSA9_9PHAE2.050e-2638.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI9.180e-2641.99EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1367contigL-elsbetiae_contig1367:8852..12543 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score174.1
Seed ortholog evalue1.4e-40
Seed eggNOG ortholog2880.D7G1U9
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size2915
Cds size1281
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1367.2790.1prot_L-elsbetiae_contig1367.2790.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1367 10473..12530 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815531.65272-UTR-L-elsbetiae_contig1367:8851..104721622815531.65272-UTR-L-elsbetiae_contig1367:8851..10472Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1367 8852..10472 -
1691682943.887136-UTR-L-elsbetiae_contig1367:8851..104721691682943.887136-UTR-L-elsbetiae_contig1367:8851..10472Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1367 8852..10472 -
1622815531.6974642-UTR-L-elsbetiae_contig1367:12530..125431622815531.6974642-UTR-L-elsbetiae_contig1367:12530..12543Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1367 12531..12543 -
1691682943.9254835-UTR-L-elsbetiae_contig1367:12530..125431691682943.9254835-UTR-L-elsbetiae_contig1367:12530..12543Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1367 12531..12543 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815531.6682727-CDS-L-elsbetiae_contig1367:10472..104911622815531.6682727-CDS-L-elsbetiae_contig1367:10472..10491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1367 10473..10491 -
1691682943.8970535-CDS-L-elsbetiae_contig1367:10472..104911691682943.8970535-CDS-L-elsbetiae_contig1367:10472..10491Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1367 10473..10491 -
1622815531.6843407-CDS-L-elsbetiae_contig1367:11268..125301622815531.6843407-CDS-L-elsbetiae_contig1367:11268..12530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1367 11269..12530 -
1691682943.908059-CDS-L-elsbetiae_contig1367:11268..125301691682943.908059-CDS-L-elsbetiae_contig1367:11268..12530Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1367 11269..12530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1367.2790.1

>prot_L-elsbetiae_contig1367.2790.1 ID=prot_L-elsbetiae_contig1367.2790.1|Name=mRNA_L-elsbetiae_contig1367.2790.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=427bp
MSLQRRRPRGPCNNLHGAVMHGSAELTAAIIASGSVNIDQGDPMGSTPLM
YCSLKGYTPVARVLLDRGADVSPADDDGVTALHISAQAGHVEICKLLLKA
GASLKAKTSDGSTPLHLSGQKGNCGVMRVLIEAGANVNSRMHTGATPLYL
AAEEGELMAIRELLRAKADPLLPSNGVFVPLDMATQNGDVAVVRELVDHA
GVKGCGGDSCGAQALRLAAEEQHIDIMIILVAAGVVDTGAVALGGAADYG
LVRSVKLLFDQCAGGAAGKRAYVNTRNTAGITPLIGTIWGGCPGAPRVAR
LLIDAGADTEACASVPGMVYSRGTPLIFVITLLHMKKIKGEPATEQQLRA
LEAVRRLLLRVGAVHAVSWLWAIDDAPRIARRAVAEGATREQAPSAPLAR
MLPTLRRRAGNRGVLLADLFRYVKKR*
back to top

mRNA from alignment at L-elsbetiae_contig1367:8852..12543-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1367.2790.1 ID=mRNA_L-elsbetiae_contig1367.2790.1|Name=mRNA_L-elsbetiae_contig1367.2790.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3692bp|location=Sequence derived from alignment at L-elsbetiae_contig1367:8852..12543- (Laminarionema elsbetiae ELsaHSoW15)
TTCAGGAACCACGATGTCTCTTCAACGGCGGCGTCCTCGAGGCCCTTGTA ATAATCTCCACGGAGCTGTAATGCATGGCTCAGCGGAACTCACCGCAGCC ATCATTGCGAGTGGGTCGGTCAACATAGACCAAGGAGACCCTATGGGATC CACCCCTCTCATGTACTGCTCCCTCAAGGGCTACACGCCTGTTGCCAGGG TCCTGCTGGACAGGGGGGCAGATGTGTCCCCGGCAGATGATGACGGAGTA ACCGCCTTGCATATTTCAGCTCAAGCCGGACATGTTGAAATATGCAAGCT TCTGCTGAAGGCCGGCGCATCCCTCAAAGCGAAAACCTCCGATGGCTCCA CGCCGCTCCACCTTTCCGGCCAGAAAGGCAACTGTGGCGTGATGAGAGTG CTGATCGAGGCCGGCGCAAACGTCAATAGCCGCATGCATACCGGTGCGAC ACCGTTGTACCTTGCGGCTGAAGAAGGCGAACTCATGGCCATCAGGGAGC TCCTTCGTGCGAAGGCAGACCCGCTGCTGCCGTCGAATGGCGTGTTCGTC CCGCTGGACATGGCCACGCAGAACGGGGACGTGGCGGTTGTGCGCGAGCT TGTCGATCACGCTGGGGTCAAGGGGTGCGGTGGCGACAGCTGCGGTGCGC AAGCTCTCCGTCTCGCCGCCGAGGAGCAGCACATCGACATCATGATAATC TTGGTGGCCGCCGGAGTAGTGGACACGGGCGCGGTAGCCCTGGGCGGCGC CGCCGATTATGGGCTCGTGAGATCCGTGAAGCTGCTGTTCGATCAGTGCG CAGGGGGGGCGGCCGGTAAAAGGGCCTACGTCAACACTCGCAATACCGCT GGTATTACTCCCTTGATCGGGACGATTTGGGGTGGCTGCCCAGGAGCACC CAGGGTAGCGCGGTTACTCATCGACGCCGGAGCGGACACGGAAGCGTGCG CGTCTGTGCCAGGGATGGTTTACTCGCGCGGCACACCCCTGATTTTCGTC ATCACTCTTCTGCATATGAAGAAAATCAAGGGCGAGCCCGCCACGGAGCA GCAGCTGCGCGCGCTGGAGGCCGTCCGACGCTTGCTGTTGAGGGTGGGGG CGGTGCACGCGGTCTCTTGGTTGTGGGCGATCGATGATGCGCCTCGTATC GCCCGCCGTGCGGTTGCAGAAGGCGCAACCAGGGAGCAGGCGCCTTCGGC CCCGCTGGCGCGGATGTTGCCGACGCTGAGGCGAAGGGCCGGAAATCGCG GTGTGCTCCTGGCGGACCTGTTCCGGTGAGAGATTACTTCTGCGCCACCA TGCAGATCAGTTACCCCCTCTCTGTTGCAACGTTTGTTGATGTCGGGGCT TCTCGTGCTGAATCCTGCGGCGGTGGCGGCCTGTGACGCCATTCCGTTCA ATTGATAACCGTGACATCGCAGTCTCTCTCGACACGGCTCGTCGGGGCTG CTCCACGTCCTGATACTTCGCGTGTATGCAATCAGTCAGAGTTAGTCGGG TAGAAGACGCGGCACTTTTGTGCAGATTATGAGTATTTTTCGAGAAACGA GATAAATATAGGGCGCACGCAAACACACAGCAATATCTACCCGGATGTGT GTGTGTGTCAGAGCACGGCGTGAGCACCGCTCAAGCACGTAAATGCTCAA ACAAAAGCATGCAGTTAGTTACCCCAATGGTTGTTGTGGTCGTCTTTGTG GGGTATGTCAGTATTCGCGCCGAGCTTGGCGAGCGCGAGGTTTGCGACTT TTGGGTACCCGAAGAGGCCTGCAGCCCGAAGTCGGGGCCCTGTGACTCGT GTTCGAGCTTGGTCGATATAGAAAGTGTGGTTGCCTCGAATTTACAAAAG AGGCCCCGCTTGCGCTGCTCGGCACTTCGCGCGACGACCTTTTTTTGGTT CGGACTCTTTTTGCCTGGGAGCTCGTGGTTCGAAGATTTAATATGTACCT AGGATAAATATGGAAGAGCACAGAAAGCAAGCAGCCTCATGCCCTCACAC TAACCCTACTTGTGTTTGCTGCTGTCTTGTTGCACTTGTTTCCTTTCAAT AGGTATGTGAAGAAGCGTTGACCGTCTCGCGACATGCGAACAGCGATAGC GGTATCTGTCGGTCTCTAGAACTTGGCGACTGGACGGAGGAGCGTGGAGG GCGGTAGCTGCAGCGGTAACAACTTTATCGCTGGCGGTCTTTGCGTAGGA GATGTCGGTTGTTGCGGAGGTGCACGGCAGAGAAGGCCCTTGTCCGCACC TGGCGTTAGGTTGGTGAGCTGTTGTACATACAGGTACGAAGTTTGCCTAG AGGACACGTATAGAGTTGAACGCCCGGCGGAAAAGCAATGGCGTCAAGCT AGCTGTGTGTAAGCAAACGGTGTGGTTATGTTGCCGATGTGATATACAAG GCACTTGAGGCTACTACTACTGTGAGGCACCGTGTATGTACAGGTACCTT TCTTCTTAACTCGAGAGCGAATAACGTAAAAAAATATCGCTCAGGCTGTA GATCACCGGTACGTTTGTTCTGTGCGTTCAGAATATATTTAGGGGTCCTC GTTGAGATGACGGTGTTGGTGATTGGTGGTCAAGCCGGCTTTGACTTGCG TCAGACTTGGATAGGGTGGGTTTGGCTTACTGGTGTTGCGGTCATTCTGA GCGACTAAAAGCCTTTTAGTTCAATATGTAGCTTGTGGGTGAGCACCCCA AAAGCCTGCTGCCTATTGTTGACCAGTGCAATCGCACTTGTTCCTTGTCC GACGAAAATTGTCGTTGTTGTGTTAGCTACAGGGGTCTTCCCCCGAGCCT GAGGAACCTACGTACCTTTTTGCTCTGGCGTGGCTCGGGCTTGGTTCGCT GCTCCGAGGGGGCACAACAAGGCGGAGACGGGGGGGGGTGCGGTTTTCAT CCGTAGAAAGAACACCTGGTGCATAGACACCCACGGTGTGCCTGTTTGTG TTCCCGTCTTTTTGCCGTCCTACACACTGTAGACCCAGAACTCTCTCGTG AAGTTGCCGGACAAGAGAGCGCGTCGAGCAAAGGCTTTCTTCATTAAATA GCTGTTTTACTTGAGCTTTTGAGTGTTGTGGGCAATTTTGCCAGTCCCTC TCGACCCCTCCTGGCGTCTATCTGGGCGCGCGGACCTGCCTCTCAGTTCG CCGTCGTGCTCTCGGCTTCGCAGGAGAGGTTTATCGTGTTGTATTCGAAG GGAGACAGACGGCGTTATTCTTGTTTCCCCGTCAGGTAGTAGATGCTTTA TCTCGTTGCTGCCGCACGCTACAGAGTACAGCAGCTTGTCTCCGGTTCCT TTGGTGTTTGCTGCCGCTGATGGTGCATTTCTTGAGGTTGTGTCTCGCCT GTCCCGGGCGTATGCGGAGTATTAAATCTGGTGCATCGATTGTACCGGCC TTGACGTATTTTGTCTCAGCCGTCGCCTTGGTGTCGACGTAACGGGTTGC GTGGTCGGTGCTAGATTATCTGCGGGAGGGGGGGGCTTGACCCCGATGCG CAGTTTTTTTTTACGTGCAACAACAACAGCAGTTCGCGACCATACGCGAT GAAGACATGAAATACGGATTTTCAAGCTACACAAACAGATGGGAGATGTA CGGTATTTTTGAGTTGCCACCACGGTAATATATCTGTTGTGTGTTTTTTA GTTACACTCTTCTCTGGTTTATGGAAGGGTGTATCGACGCGG
back to top

Coding sequence (CDS) from alignment at L-elsbetiae_contig1367:8852..12543-

>mRNA_L-elsbetiae_contig1367.2790.1 ID=mRNA_L-elsbetiae_contig1367.2790.1|Name=mRNA_L-elsbetiae_contig1367.2790.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2562bp|location=Sequence derived from alignment at L-elsbetiae_contig1367:8852..12543- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCTCTTCAACGGCGGCGTCCTCGAGGCCCTTGTAATAATCTCCACGG
AGCTGTAATGCATGGCTCAGCGGAACTCACCGCAGCCATCATTGCGAGTG
GGTCGGTCAACATAGACCAAGGAGACCCTATGGGATCCACCCCTCTCATG
TACTGCTCCCTCAAGGGCTACACGCCTGTTGCCAGGGTCCTGCTGGACAG
GGGGGCAGATGTGTCCCCGGCAGATGATGACGGAGTAACCGCCTTGCATA
TTTCAGCTCAAGCCGGACATGTTGAAATATGCAAGCTTCTGCTGAAGGCC
GGCGCATCCCTCAAAGCGAAAACCTCCGATGGCTCCACGCCGCTCCACCT
TTCCGGCCAGAAAGGCAACTGTGGCGTGATGAGAGTGCTGATCGAGGCCG
GCGCAAACGTCAATAGCCGCATGCATACCGGTGCGACACCGTTGTACCTT
GCGGCTGAAGAAGGCGAACTCATGGCCATCAGGGAGCTCCTTCGTGCGAA
GGCAGACCCGCTGCTGCCGTCGAATGGCGTGTTCGTCCCGCTGGACATGG
CCACGCAGAACGGGGACGTGGCGGTTGTGCGCGAGCTTGTCGATCACGCT
GGGGTCAAGGGGTGCGGTGGCGACAGCTGCGGTGCGCAAGCTCTCCGTCT
CGCCGCCGAGGAGCAGCACATCGACATCATGATAATCTTGGTGGCCGCCG
GAGTAGTGGACACGGGCGCGGTAGCCCTGGGCGGCGCCGCCGATTATGGG
CTCGTGAGATCCGTGAAGCTGCTGTTCGATCAGTGCGCAGGGGGGGCGGC
CGGTAAAAGGGCCTACGTCAACACTCGCAATACCGCTGGTATTACTCCCT
TGATCGGGACGATTTGGGGTGGCTGCCCAGGAGCACCCAGGGTAGCGCGG
TTACTCATCGACGCCGGAGCGGACACGGAAGCGTGCGCGTCTGTGCCAGG
GATGGTTTACTCGCGCGGCACACCCCTGATTTTCGTCATCACTCTTCTGC
ATATGAAGAAAATCAAGGGCGAGCCCGCCACGGAGCAGCAGCTGCGCGCG
CTGGAGGCCGTCCGACGCTTGCTGTTGAGGGTGGGGGCGGTGCACGCGGT
CTCTTGGTTGTGGGCGATCGATGATGCGCCTCGTATCGCCCGCCGTGCGG
TTGCAGAAGGCGCAACCAGGGAGCAGGCGCCTTCGGCCCCGCTGGCGCGG
ATGTTGCCGACGCTGAGGCGAAGGGCCGGAAATCGCGGTGTGCTCCTGGC
GGACCTGTTCCGATGTCTCTTCAACGGCGGCGTCCTCGAGGCCCTTGTAA
TAATCTCCACGGAGCTGTAATGCATGGCTCAGCGGAACTCACCGCAGCCA
TCATTGCGAGTGGGTCGGTCAACATAGACCAAGGAGACCCTATGGGATCC
ACCCCTCTCATGTACTGCTCCCTCAAGGGCTACACGCCTGTTGCCAGGGT
CCTGCTGGACAGGGGGGCAGATGTGTCCCCGGCAGATGATGACGGAGTAA
CCGCCTTGCATATTTCAGCTCAAGCCGGACATGTTGAAATATGCAAGCTT
CTGCTGAAGGCCGGCGCATCCCTCAAAGCGAAAACCTCCGATGGCTCCAC
GCCGCTCCACCTTTCCGGCCAGAAAGGCAACTGTGGCGTGATGAGAGTGC
TGATCGAGGCCGGCGCAAACGTCAATAGCCGCATGCATACCGGTGCGACA
CCGTTGTACCTTGCGGCTGAAGAAGGCGAACTCATGGCCATCAGGGAGCT
CCTTCGTGCGAAGGCAGACCCGCTGCTGCCGTCGAATGGCGTGTTCGTCC
CGCTGGACATGGCCACGCAGAACGGGGACGTGGCGGTTGTGCGCGAGCTT
GTCGATCACGCTGGGGTCAAGGGGTGCGGTGGCGACAGCTGCGGTGCGCA
AGCTCTCCGTCTCGCCGCCGAGGAGCAGCACATCGACATCATGATAATCT
TGGTGGCCGCCGGAGTAGTGGACACGGGCGCGGTAGCCCTGGGCGGCGCC
GCCGATTATGGGCTCGTGAGATCCGTGAAGCTGCTGTTCGATCAGTGCGC
AGGGGGGGCGGCCGGTAAAAGGGCCTACGTCAACACTCGCAATACCGCTG
GTATTACTCCCTTGATCGGGACGATTTGGGGTGGCTGCCCAGGAGCACCC
AGGGTAGCGCGGTTACTCATCGACGCCGGAGCGGACACGGAAGCGTGCGC
GTCTGTGCCAGGGATGGTTTACTCGCGCGGCACACCCCTGATTTTCGTCA
TCACTCTTCTGCATATGAAGAAAATCAAGGGCGAGCCCGCCACGGAGCAG
CAGCTGCGCGCGCTGGAGGCCGTCCGACGCTTGCTGTTGAGGGTGGGGGC
GGTGCACGCGGTCTCTTGGTTGTGGGCGATCGATGATGCGCCTCGTATCG
CCCGCCGTGCGGTTGCAGAAGGCGCAACCAGGGAGCAGGCGCCTTCGGCC
CCGCTGGCGCGGATGTTGCCGACGCTGAGGCGAAGGGCCGGAAATCGCGG
TGTGCTCCTGGCGGACCTGTTCCGGTATGTGAAGAAGCGTTGAGTATGTG
AAGAAGCGTTGA
back to top