mRNA_L-elsbetiae_contig13652.2778.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: D7FVK5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK5_ECTSI) HSP 1 Score: 198 bits (503), Expect = 1.330e-60 Identity = 104/116 (89.66%), Postives = 108/116 (93.10%), Query Frame = 2 Query: 2 VIMQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPR--KGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQIIKK 343 VIMQVDGKEGLAVMK+RIA RGP+A YDGALAFAGGSLMGHYPWYLTYNLLEQ LPR KGEGR+RRARSAFIGAAASIVSA ASNA RVLKVYRQSHDRPDGLSY +SIKQIIKK Sbjct: 199 VIMQVDGKEGLAVMKKRIATRGPVAVYDGALAFAGGSLMGHYPWYLTYNLLEQSLPRTRKGEGRSRRARSAFIGAAASIVSAAASNAFRVLKVYRQSHDRPDGLSYAKSIKQIIKK 314
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: D8LEK6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEK6_ECTSI) HSP 1 Score: 109 bits (272), Expect = 1.550e-26 Identity = 51/113 (45.13%), Postives = 80/113 (70.80%), Query Frame = 2 Query: 5 IMQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQIIKK 343 IMQV+GKEG + +++ V GP Y GALA + +L+GHYPW+ TYN L++R+P++ G + AR+ IG +S+VS SN++RV+KVY+QSH +G++Y Q+++ +I K Sbjct: 141 IMQVEGKEGFPALVKKVKVGGPTVLYHGALAASSATLVGHYPWFFTYNYLQERIPKQDSGIKKLARNGIIGFCSSVVSDTCSNSIRVVKVYKQSHT--EGVTYVQAVRDVIAK 251
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0A835ZPC0_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPC0_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.270e-23 Identity = 48/111 (43.24%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 5 IMQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQII 337 IMQV+GK G +K++ GP Y GA+A + + +GHYPW+ TYN L++R+P++ + AR+A IG A+S+VS SN++RV+KVY+QS P ++Y Q+ K +I Sbjct: 141 IMQVEGKNGFPALKKKFKANGPSVLYHGAIAASAATFVGHYPWFFTYNYLQERIPKETATLRKLARNAVIGFASSLVSDTCSNSIRVIKVYKQSSTEP--VTYLQAAKNVI 249
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0A7S4B640_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B640_CHRCT) HSP 1 Score: 98.6 bits (244), Expect = 1.980e-22 Identity = 53/110 (48.18%), Postives = 76/110 (69.09%), Query Frame = 2 Query: 8 MQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQII 337 +QV G EG+AV++RR+ +G Y GAL + +L+GHYPW+LT+N L+ R+P K G R+ RSA IG A+S S V SN++RV+K +Q+H PDG+SY +I+ II Sbjct: 159 LQVQGAEGMAVLRRRVTSQGLSTLYAGALGSSAATLVGHYPWFLTHNYLDARIP-KAAGAARQIRSAAIGLASSFNSDVISNSVRVVKTAKQTH--PDGISYLATIQMII 265
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0CUY1_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0CUY1_PARTE) HSP 1 Score: 97.1 bits (240), Expect = 5.190e-22 Identity = 46/113 (40.71%), Postives = 79/113 (69.91%), Query Frame = 2 Query: 5 IMQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQIIKK 343 I+QV+GK GL +++ +I V+G A Y GALA A +++GHYPW+ T+NLL ++LP + + + AR AFIG +S++S SN+LRV+K +Q+ P ++Y++++ +++K Sbjct: 144 ILQVEGKNGLTILQSKIKVKGVPALYHGALATASATIVGHYPWFATFNLLNEKLPDYTDKKKKLARRAFIGFCSSVISDSISNSLRVIKTTKQTSQNP--ITYKEAVNLVLEK 254
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0A8J1ZCX4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZCX4_9DINO) HSP 1 Score: 94.7 bits (234), Expect = 4.210e-21 Identity = 47/113 (41.59%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 5 IMQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQIIKK 343 IMQV+GK GL ++ + +GP + GA+A + + +GHYPW+ TYN L++ +P+ E + AR+A IG +S++S SN+LRV+K YRQ++ PD +SY +++K+I+ K Sbjct: 146 IMQVEGKPGLDILFAKSRAKGPTVFWHGAVAASAATFVGHYPWFATYNTLQEVIPQYDELPKKLARNAGIGFVSSVISDTISNSLRVVKTYRQTN--PDPISYSETVKKIVDK 256
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0A507ETL8_9FUNG (Methionine--tRNA ligase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507ETL8_9FUNG) HSP 1 Score: 96.3 bits (238), Expect = 7.660e-21 Identity = 48/112 (42.86%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 8 MQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQIIKK 343 MQ G EG A+++ R+ G + GA A A + +GHYPW+ TYN+L++ +P++ + AR+A IG +ASIVS SN+LRV+K YRQ+H+ P +SYRQ++++++ K Sbjct: 943 MQTKGTEGTALLRSRVKAHGVGTLWYGAGASAAATFVGHYPWFATYNMLQEYIPKQSTTGKKLARNAVIGFSASIVSDCISNSLRVIKTYRQTHEVP--ISYRQAVQEVVAK 1052
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0A507FEX8_9FUNG (Methionine--tRNA ligase n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FEX8_9FUNG) HSP 1 Score: 95.9 bits (237), Expect = 1.060e-20 Identity = 48/112 (42.86%), Postives = 76/112 (67.86%), Query Frame = 2 Query: 8 MQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQIIKK 343 MQ G EG A+++ R+ G + GA A A + +GHYPW+ TYN+L++ +P++ + AR+A IG +ASIVS SN+LRV+K YRQ+H+ P +SYRQ++++++ K Sbjct: 1455 MQTKGAEGTALLRSRVKAHGVGTLWYGAGASAAATFVGHYPWFATYNMLQEYIPKQSTTGKKLARNAAIGFSASIVSDCISNSLRVIKTYRQTHEVP--ISYRQAVQEVVAK 1564
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0A1Y2CNN8_9FUNG (Mitochondrial carrier n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2CNN8_9FUNG) HSP 1 Score: 90.5 bits (223), Expect = 1.330e-19 Identity = 45/112 (40.18%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 8 MQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQIIKK 343 MQ G G +++ R+ G + G++A A + +GHYPW+ TYN+L++ +P++ + AR+A IG +ASIVS SN+LRV+K YRQ+H+ +SYRQ+++++I K Sbjct: 134 MQTQGATGTKLLRERVRAHGVGTLWYGSVATAAATFVGHYPWFATYNMLQEYIPKQTTTGKKLARNAVIGFSASIVSDCISNSLRVIKTYRQTHETK--VSYRQAVQEVIAK 243
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Match: A0A4D9D3X0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D3X0_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 3.270e-19 Identity = 43/111 (38.74%), Postives = 74/111 (66.67%), Query Frame = 2 Query: 5 IMQVDGKEGLAVMKRRIAVRGPIAAYDGALAFAGGSLMGHYPWYLTYNLLEQRLPRKGEGRNRRARSAFIGAAASIVSAVASNALRVLKVYRQSHDRPDGLSYRQSIKQII 337 I QV+GK+G V+ ++ GP Y GALA +L+GHYPW+ TYN L++ LP+ + + + R+A IG ++S +S SN++RV+KVY+Q++ + ++Y ++++II Sbjct: 150 IKQVEGKDGFKVLMAKMKTHGPGVMYHGALAAFAANLLGHYPWFATYNYLQENLPKTDDFKMKLCRNALIGFSSSAISDTVSNSVRVVKVYKQANS--EHIAYPDAVRRII 258 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13652.2778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13652.2778.1 >prot_L-elsbetiae_contig13652.2778.1 ID=prot_L-elsbetiae_contig13652.2778.1|Name=mRNA_L-elsbetiae_contig13652.2778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=115bp GDHAGGRQGGAGRDEEANSGARPDRGVRRRAGVRGGFADGPLSLVFNVQLback to top mRNA from alignment at L-elsbetiae_contig13652:938..3298- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13652.2778.1 ID=mRNA_L-elsbetiae_contig13652.2778.1|Name=mRNA_L-elsbetiae_contig13652.2778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2361bp|location=Sequence derived from alignment at L-elsbetiae_contig13652:938..3298- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13652:938..3298- >mRNA_L-elsbetiae_contig13652.2778.1 ID=mRNA_L-elsbetiae_contig13652.2778.1|Name=mRNA_L-elsbetiae_contig13652.2778.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=690bp|location=Sequence derived from alignment at L-elsbetiae_contig13652:938..3298- (Laminarionema elsbetiae ELsaHSoW15)back to top |