mRNA_L-elsbetiae_contig1365.2777.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: D8LK66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK66_ECTSI) HSP 1 Score: 311 bits (798), Expect = 4.160e-104 Identity = 156/174 (89.66%), Postives = 165/174 (94.83%), Query Frame = 1 Query: 1 QVTDTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVNPTGEGDKQAGLLDGFRMITTLLQRW 522 +VTDTAWRGQAGLD+TDA DGSR W DLSARKGLA GD ALT+FAYVGRASHGMASFDLGVL TALPFL+GWLAV+PLLGA+TRSAT TPGGAAKALLPAWG+S+PV IFLRALSKGGEVPPVPFAVTSM+FTLAALMAWRQLYTAVNPTGEGDKQAGLLDGFRMITTLLQRW Sbjct: 189 EVTDTAWRGQAGLDVTDAADGSRDWSDLSARKGLAVGDAVALTMFAYVGRASHGMASFDLGVLLTALPFLIGWLAVSPLLGAYTRSATETPGGAAKALLPAWGISIPVGIFLRALSKGGEVPPVPFAVTSMIFTLAALMAWRQLYTAVNPTGEGDKQAGLLDGFRMITTLLQRW 362
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: A0A835ZDH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDH1_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.800e-54 Identity = 94/175 (53.71%), Postives = 124/175 (70.86%), Query Frame = 1 Query: 1 QVTDTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVNPTGEGD-KQAGLLDGFRMITTLLQRW 522 +V DTAW GQAG+D+T GS++W D+S R GLAAGD+ ALT+FA +GR H + D+ V TALPF +GWL ++PLLGA+T ATAT L+PAW +S+PVA+ +R KG +VPPVPF + S++ T + L AWR LY +NPT + K+ G+LDGFRMITTLL+RW Sbjct: 101 EVLDTAWSGQAGMDVTVV--GSKTWADISKRLGLAAGDVIALTVFASIGRGVHTGSGIDVEVFKTALPFYIGWLGLSPLLGAYTNQATATQKDMISTLVPAWAVSIPVALAIRGAVKG-DVPPVPFIIVSLIATGSLLAAWRGLYVVINPTSTAETKRGGILDGFRMITTLLRRW 272
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: A0A7S2UZN6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN6_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.330e-52 Identity = 91/176 (51.70%), Postives = 118/176 (67.05%), Query Frame = 1 Query: 4 VTDTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVNPTGEGDKQ---AGLLDGFRMITTLLQRW 522 + T W GQAGLD+++ G+R+W DL+ R L GD+A L LF+Y+GRASHG D G+LGTA PFL GWL +APL GA+TR A G +AK++ AW S+P IF RAL+KGGE+PP F SM TL L+ WR ++ VN G DK+ G++DGFRMITTL++RW Sbjct: 110 IEKTQWSGQAGLDVSEP--GNRNWSDLATRPLLTLGDMATLVLFSYIGRASHGNPQVDWGLLGTAAPFLAGWLLLAPLAGAYTRQAVTDQGSSAKSVAVAWVASIPAGIFARALTKGGEIPPTSFIAVSMTATLVLLLTWRAIFVKVN--GSPDKEFRDGGIIDGFRMITTLIKRW 281
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: W7TIG6_9STRA (Uncharacterized protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TIG6_9STRA) HSP 1 Score: 147 bits (371), Expect = 3.170e-40 Identity = 87/178 (48.88%), Postives = 112/178 (62.92%), Query Frame = 1 Query: 4 VTDTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASH-GMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVN----PTGEGDKQAGLLDGFRMITTLLQRW 522 V +TAW GQAGLD+ G +W D+ AR LA GD+ LFA VGR+ H G S D+ V+ TA PF++ WL +APLLGA+T A+ + G A K +L AW L++P + R L KG EVPPVPF +MV TL L AWR AV GEG+K++GL D F+M+TTL+ RW Sbjct: 146 VAETAWSGQAGLDVRRV--GENNWKDVGARPLLALGDVLMFLLFASVGRSIHTGGLSLDVQVVQTAAPFILAWLGLAPLLGAYTPEASRSTGNAVKTVLKAWALAVPGGLVGRGLLKG-EVPPVPFMAVTMVTTLVLLTAWRVAVVAVAGGEVEGGEGNKRSGLFDVFKMVTTLIGRW 320
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: R7QL50_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL50_CHOCR) HSP 1 Score: 144 bits (362), Expect = 1.940e-37 Identity = 81/173 (46.82%), Postives = 110/173 (63.58%), Query Frame = 1 Query: 10 DTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAV--NPTGEGDKQAGLLDGFRMITTLLQRW 522 D W GQAG+D T G+ ++ DL R LA GD AA LFAY+G+ASHG S + GV+ TA PF+V WLA +PLLGA+TR+ATA K +W +++P+ I LR + VPP FAV ++V T A + WR LYT + + T E ++ G+LDGF M++TLL+RW Sbjct: 337 DVNWSGQAGVD-TPGSSGTSNYSDLGKRLDLALGDTAAFLLFAYIGKASHGDKSLNFGVVQTATPFIVAWLATSPLLGAYTRAATANVAATVKTFAKSWAIAVPMGIGLRGVLTD-HVPPAVFAVVTLVSTFAIVGGWRVLYTKIRGDETDEA-RRGGILDGFNMVSTLLRRW 506
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: A0A2V3IEJ3_9FLOR (Adenylate kinase, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEJ3_9FLOR) HSP 1 Score: 128 bits (321), Expect = 9.350e-32 Identity = 75/172 (43.60%), Postives = 105/172 (61.05%), Query Frame = 1 Query: 10 DTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVN-PTGEGDKQAGLLDGFRMITTLLQRW 522 D W GQA D ++ G+ S+ DL+ R L GD+ AL FAY+GR SHG S D VL TA PF+ WL +PLLGA+TR+ATA K + AW +++P+ I LR + VPPV FAV S+V TL + +WR LY + + ++ G+++ F+M+TTLL+RW Sbjct: 300 DVNWSGQATADTPESA-GTSSYADLARRLDLVLGDVLALVSFAYIGRYSHGNKSLDFEVLKTAAPFISAWLISSPLLGAYTRAATANIPATLKYFVRAWAVAVPMGIGLRGVVTD-HVPPVVFAVISLVATLLLMGSWRTLYVLIRGDETDSARRGGVVETFKMVTTLLRRW 469
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: A0A0G4HX28_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HX28_9ALVE) HSP 1 Score: 125 bits (313), Expect = 1.810e-31 Identity = 79/180 (43.89%), Postives = 108/180 (60.00%), Query Frame = 1 Query: 1 QVTDTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGM----ASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVN--PTGEGDKQAGLLDGFRMITTLLQRW 522 + +T+W GQAG+D + DG+ W L RK L AGDL AL LFA++GRASHG +L V TA PF+ GWLA+AP LGA TR +T T AA A LSMP+ + +RA KG E+PP F S++ T L+ WR LYT + +G+++ L+D +M+ TL++RW Sbjct: 162 EARETSWSGQAGMDEVENFDGA--WAALPKRKLLLAGDLLALYLFAFIGRASHGEDVSGGLLNLEVWQTAAPFIAGWLALAPPLGAFTRGSTMTVQMAAMEGAKAAALSMPLGVCIRAGLKG-ELPPPVFVGVSILTTFTFLVGWRALYTKIRGQEDEDGNREENLVDTVKMVLTLIKRW 338
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: A0A1X6P744_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P744_PORUM) HSP 1 Score: 120 bits (301), Expect = 4.700e-29 Identity = 76/170 (44.71%), Postives = 99/170 (58.24%), Query Frame = 1 Query: 19 WRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVN--PTGEGDKQAGLLDGFRMITTLLQRW 522 W GQAG+D+ S+ D++A LAAGD+A FA +G ASH + L V TA PF+V WLAVAPL+GA+TR A T GAA AW + +P + LR + +PP FAV +++ T L WR Y + EG K+ G+LDGFRMITTLL+RW Sbjct: 272 WSGQAGVDVN-TPAAPPSYADMAAHPLLAAGDVAVFLAFATIGAASHAANANPLSVTLTAAPFIVAWLAVAPLMGAYTRRAVGTYQGAAVTTARAWLVGVPSGLALRGVVTS-HLPPPSFAVVTLLSTAVLLGVWRGSYVKLRGAEVAEG-KRGGVLDGFRMITTLLRRW 438
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: A0A5J4YRR5_PORPP (Adenylate kinase 8 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YRR5_PORPP) HSP 1 Score: 108 bits (269), Expect = 4.380e-24 Identity = 68/175 (38.86%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 1 QVTDTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSATATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVNPTGEG--DKQAGLLDGFRMITTLLQR 519 + +T + GQAG D+ A GS S+GD+ R LAAGDL+ +FA +G+ +H + L L A PF +GW+ +P+LGA+T +AT++ + + +++P+ + +R L VPP FA +M+ L L AWR Y +V T + +K+ GLLDGF+MITTLL+R Sbjct: 572 EAKNTNYSGQAGADLAIAT-GSSSYGDILNRPVLAAGDLSMFLVFASIGQMNHKESVDLLSTLQVAFPFALGWVLGSPVLGAYTAAATSSQSAVLACVARSALVALPLGLAIRGLETS-HVPPPSFAGIAMITNLILLSAWRSAYISVAGTSDPGPEKRGGLLDGFKMITTLLRR 744
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Match: A0A835T3W3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835T3W3_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 3.250e-22 Identity = 70/180 (38.89%), Postives = 90/180 (50.00%), Query Frame = 1 Query: 10 DTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRASHGMASFDLGVLGTALPFLVGWLAVAPLLGAHTRSAT--ATPGGAAKALLPAWGLSMPVAIFLRALSKGGEVPPVPFAVTSMVFTLAALMAWRQLYTAVNPTGEGD-------KQAGLLDGFRMITTLLQRW 522 D AW G A +D GS DL + LAAGD AAL LFA GR++HG A+ + LGTALPF++GW A AP LG A P AA A W +P+ + +R LS+G VPPVPF SM T L+ WR A E D K+ + ++ +L +RW Sbjct: 114 DDAWAGVARVDR-----GSTDAFDLQSALVLAAGDAAALLLFAAAGRSNHGEATQAVDALGTALPFIIGWFATAPFLGGFGAEARKKGVPAAAATAA-KCWAAGVPLGLVIRGLSRG-YVPPVPFIGVSMAVTGVLLVGWRSALAAATKPDEPDSLKARKDKRGNPFEFLELLMSLTKRW 286 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1365.2777.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1365.2777.1 >prot_L-elsbetiae_contig1365.2777.1 ID=prot_L-elsbetiae_contig1365.2777.1|Name=mRNA_L-elsbetiae_contig1365.2777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=175bp QVTDTAWRGQAGLDITDADDGSRSWGDLSARKGLAAGDLAALTLFAYVGRback to top mRNA from alignment at L-elsbetiae_contig1365:24191..25172- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1365.2777.1 ID=mRNA_L-elsbetiae_contig1365.2777.1|Name=mRNA_L-elsbetiae_contig1365.2777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=982bp|location=Sequence derived from alignment at L-elsbetiae_contig1365:24191..25172- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1365:24191..25172- >mRNA_L-elsbetiae_contig1365.2777.1 ID=mRNA_L-elsbetiae_contig1365.2777.1|Name=mRNA_L-elsbetiae_contig1365.2777.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1050bp|location=Sequence derived from alignment at L-elsbetiae_contig1365:24191..25172- (Laminarionema elsbetiae ELsaHSoW15)back to top |