mRNA_L-elsbetiae_contig1363.2763.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1363.2763.1
Unique NamemRNA_L-elsbetiae_contig1363.2763.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: D8LEW1_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW1_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 5.380e-164
Identity = 241/292 (82.53%), Postives = 255/292 (87.33%), Query Frame = 2 
Query:  152 WVAP-HRCAARCSYPRRGLSRYRAQPSAVIGGESTS---AGGGVGTQLIAKPPLKVIRGRAGPADATPTYDDTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQQDQPAVARCHQIDIDEDSG 1015
            W+AP HRC+ RC          RA+ S+ IGG +      G G+     AKPPLKVIRGRAGP DATPTYDDTRPLDR+LLGLFRSKLAEEVGG+GD +EPGYDGLM+MIKVLNEK PSKR+TQEASRRVLKSLFPSWLPA FAVMFSKPFPAFSSRLNAWVTL+ASQWLMGPS+LNDIE D GTVG GHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQ +QPAVARCHQIDIDED  
Sbjct:   36 WIAPPHRCSTRC----------RARSSSTIGGSTALDPVGGAGIEPADAAKPPLKVIRGRAGPTDATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDEDDS 317
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A0A6H5K8Y9_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y9_9PHAE)

HSP 1 Score: 300 bits (767), Expect = 8.490e-87
Identity = 158/237 (66.67%), Postives = 172/237 (72.57%), Query Frame = 2 
Query:  161 PHRCAARCSYPRRGLSRYRAQPSAVIGGESTS---AGGGVGTQLIAKPPLKVIRGRAGPADATPTYDDTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQ 862
            PHRC+ RC          RA+ S+ IGG + S    G G+     AKPPLKVIRGRAGP  ATPTYDDTRPLDR+LLGLFRSKLAEEVG +GD +EPGYDGLM+MIKVLNEK PSKR+TQEASRRVLKSLFP+WLPA FAVMFSKPFPAFSSRLNAWVTL+ASQWLMGPS+LND+E                                  VPTEEFFAKDMGLALEMTPNYEDFSCQ
Sbjct:   40 PHRCSTRC----------RARSSSTIGGSTASDSVGGAGIEPADAAKPPLKVIRGRAGPTAATPTYDDTRPLDRILLGLFRSKLAEEVGEDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPAWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDVE----------------------------------VPTEEFFAKDMGLALEMTPNYEDFSCQ 232
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A0A835ZDY9_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY9_9STRA)

HSP 1 Score: 283 bits (725), Expect = 1.180e-86
Identity = 132/213 (61.97%), Postives = 169/213 (79.34%), Query Frame = 2 
Query:  374 VLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEK--HPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQQDQPAVARCHQIDIDE 1006
            +LLGLFR KLA E+  +G   +PGY GL+EMI+ LN+   +P+   TQ+A+R+VL+SLFP WLP  FAVMFSKPFP FS R+NAWVTL+ASQWLMGPS++ND+E DGG +G GHGLLV+RCR+LE AGCASVC+NTCK+PT+EFF KDMGL L+MTP+Y+DFSCQFSF K PL  + DE F VACFEQCP++ + ++        CH++ ++E
Sbjct:    1 MLLGLFRKKLAAELQYDGS--DPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRL-------CHKVGLEE 204
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A0A8J4BT63_9CHLO (D27-like_C domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BT63_9CHLO)

HSP 1 Score: 268 bits (686), Expect = 3.830e-80
Identity = 122/210 (58.10%), Postives = 159/210 (75.71%), Query Frame = 2 
Query:  320 AGPADATPTYDD--TRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR 943
            AGP D  P+Y D  ++P++ V++ LFR K+   +G + ++Y  GYD ++++ + LN K  +  +TQEA+R +L +LFPSWLP  F VMFSKPFP FS RLNA  T +  QWLMGP ++ND+E DGG VG GHG+LVERCR+LE AGCASVC+N+CK+PT+ FF+KDMGL L MTPNYEDFSCQF+F KTP+  +MDEAF   CF QCPS+
Sbjct:   42 AGPTDPAPSYRDIDSQPVNVVVMALFRRKMVAALGSDSELY--GYDAIIDLTRRLNSKFRTGAETQEATRAILNALFPSWLPGAFKVMFSKPFPEFSCRLNALATALTCQWLMGPCKVNDVEIDGGIVGKGHGVLVERCRYLEQAGCASVCINSCKIPTQTFFSKDMGLQLTMTPNYEDFSCQFAFGKTPMLAEMDEAFTTPCFRQCPSK 249
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO)

HSP 1 Score: 268 bits (684), Expect = 1.740e-79
Identity = 145/286 (50.70%), Postives = 180/286 (62.94%), Query Frame = 2 
Query:  167 RCAARCSYPRRGLSRYRAQPSAVIGGESTSA------GGGVGTQLIAKPPLKVIRGRAGPADATPTYD--DTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR-------GALRQQDQPAVA 979
            R AA  S PRRG +  R  P A      T A       G   TQL           +AGP    P+Y   D +PL+RV++ LFR K+ E +G +  +   GY  ++++ + LN ++ + R TQ A+RR+L SLFPSWLP  F VMFS P PAFS RLNA  T +  QWLMGP ++ND+E D G VG+G G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGL L MTPNYEDFSCQF+F KTPL +  DEAF   CF QCPS+       GA R  D P VA
Sbjct:   18 RLAASPSAPRRGAASSRPCPRAPRRPRLTLARAAGPLDGAAATQLR----------QAGPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIGSDSQLQ--GYPAIIDLTRRLNRQYQTARDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSKKRTFSDGGAGRPGDCPNVA 291
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: I0YX40_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX40_COCSC)

HSP 1 Score: 263 bits (673), Expect = 9.860e-79
Identity = 119/211 (56.40%), Postives = 156/211 (73.93%), Query Frame = 2 
Query:  317 RAGPADATPTYD--DTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR 943
            +AGP    P+Y+  D++PL+R ++ LFR K+   +G   D  + GYD ++++ ++LN K  + R TQ  +R++L SLFPSWLP  F VMFSKP P  S +LNAWVT++  QWLMGP ++ND+E DGG +G+G G+LVERCR+LE  GCASVC+N+CK+PT+EFFAKDMGL L MTPNYEDFSCQFSF  TP    +DEAF   CF QCPS+
Sbjct:    7 KAGPETPAPSYESIDSQPLNRAIMSLFRQKMVAAIGKNSD--KEGYDAIVDLTRLLNSKSSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSK 215
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO)

HSP 1 Score: 261 bits (666), Expect = 1.160e-77
Identity = 119/213 (55.87%), Postives = 157/213 (73.71%), Query Frame = 2 
Query:  317 RAGPADATPTYD--DTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGA 949
            +AGP +  P Y   D++PL++V++ LFR K+   +G +  +   GY+ ++++ + LN  +   RQ Q  +R++LKSLFPSWLP  FAVMFSKP P FS +LNA  T +  QWLMGP ++ND+E D G+VG G G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGL L MTPNYEDFSCQF+F K PL + +DEAF   CF+QCPSR A
Sbjct:    1 QAGPVEPVPDYTAIDSQPLNQVVMALFRRKMVAAIGSDSQL--SGYEAIIDLTRRLNASYSEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVELDDGSVGQGMGVLVERCRYLEQAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFTFGKAPLPQQLDEAFSTPCFQQCPSRAA 211
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A8IC34_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IC34_CHLRE)

HSP 1 Score: 259 bits (662), Expect = 1.750e-76
Identity = 121/211 (57.35%), Postives = 154/211 (72.99%), Query Frame = 2 
Query:  317 RAGPADATPTYD--DTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR 943
            +AGP DA P Y   D++PL+ +++ LFR K+ E +G +  +   GYD ++++ + LN K  +  +TQEA+R +L +LFPSWLP  F VMFS+P P FS RLNA  T +  QWLMGP ++ND+E DGG VG GHG+LVERCR+LE AGCASVC+N+CKVPT+ FF KDMGL L MTPNY+DFSCQFSF KTP   D D AF   CF QCPS+
Sbjct:   50 QAGPVDAAPDYKPIDSQPLNIIVMALFRRKMVEALGSDSKL--SGYDAIIDLTRKLNTKFRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSK 258
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A0A2V0P122_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P122_9CHLO)

HSP 1 Score: 260 bits (665), Expect = 2.620e-76
Identity = 121/211 (57.35%), Postives = 155/211 (73.46%), Query Frame = 2 
Query:  317 RAGPADATPTYD--DTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSR 943
            +AGPA A P Y   D +PL+RV++ LFR K+AE +G +  +   GY  ++++ + LN ++P+ R TQ  +R +L SLFP WLP  F  MFS+P PA S RLNA+ T +  QWLMGP ++ND+E DGG VGAG G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGL L MTPNY+DFSCQF+F KTP  +  DEAF   CF QCPSR
Sbjct:   21 QAGPAAAAPDYAGVDAQPLNRVVMALFRRKMAEAIGSDSQLQ--GYPAIIDLTRRLNRQYPTARDTQLTTRAILNSLFPGWLPGAFRAMFSRPLPALSCRLNAFATALTCQWLMGPCKVNDVEIDGGQVGAGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYDDFSCQFAFGKTPQPQAEDEAFSTPCFTQCPSR 229
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BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Match: A0A2J8AIV6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AIV6_9CHLO)

HSP 1 Score: 256 bits (655), Expect = 5.170e-74
Identity = 118/210 (56.19%), Postives = 156/210 (74.29%), Query Frame = 2 
Query:  338 TPTYD--DTRPLDRVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEASRRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLNDIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQQ 961
            TP+Y   D +PL+++++ LFR K+   VG +  +   GYD ++++ + LN K  +  +TQEA+R +L +LFPSWLP  F VMF++P P  S R+NA  T +  QWLMGP ++ND+ETD GTVG GHG+LVERCR+LE AGCA+VC+N+CKVPT+ FFAKDMGLAL MTPNY+DFSCQF+F KTPL    DEA+  +CF QCPS+ A R Q
Sbjct:  171 TPSYAAIDVQPLNKIVMALFRRKMVAAVGSDSPL--SGYDAIIDLTRRLNNKFRTAAETQEATRSILIALFPSWLPGAFKVMFARPLPELSCRMNALATALTCQWLMGPCKVNDVETDDGTVGEGHGVLVERCRYLEQAGCAAVCINSCKVPTQSFFAKDMGLALTMTPNYDDFSCQFAFGKTPLPVSADEAYTTSCFAQCPSKKARRNQ 378
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1363.2763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEW1_ECTSI5.380e-16482.53D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5K8Y9_9PHAE8.490e-8766.67PROTEASOME_ALPHA_1 domain-containing protein n=1 T... [more]
A0A835ZDY9_9STRA1.180e-8661.97D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
A0A8J4BT63_9CHLO3.830e-8058.10D27-like_C domain-containing protein n=2 Tax=Volvo... [more]
A0A0D2MYG1_9CHLO1.740e-7950.70D27-like_C domain-containing protein n=1 Tax=Monor... [more]
I0YX40_COCSC9.860e-7956.40D27-like_C domain-containing protein n=1 Tax=Cocco... [more]
A0A7J7QQS2_9CHLO1.160e-7755.87D27-like_C domain-containing protein n=1 Tax=Scene... [more]
A8IC34_CHLRE1.750e-7657.35Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
A0A2V0P122_9CHLO2.620e-7657.35D27-like_C domain-containing protein n=1 Tax=Raphi... [more]
A0A2J8AIV6_9CHLO5.170e-7456.19D27-like_C domain-containing protein n=1 Tax=Tetra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1363contigL-elsbetiae_contig1363:7770..14030 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score497.7
Seed ortholog evalue4.1e-138
Seed eggNOG ortholog2880.D8LEW1
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Domain of unknown function (DUF4033)
EggNOG OGs28YJ7@1,2R5D2@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionDomain of unknown function DUF4033
Ec32 orthologEc-21_005770.1
Exons6
Model size2555
Cds size951
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1363.2763.1prot_L-elsbetiae_contig1363.2763.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1363 9304..13960 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815529.4499307-UTR-L-elsbetiae_contig1363:7769..93031622815529.4499307-UTR-L-elsbetiae_contig1363:7769..9303Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1363 7770..9303 -
1691682942.5673797-UTR-L-elsbetiae_contig1363:7769..93031691682942.5673797-UTR-L-elsbetiae_contig1363:7769..9303Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1363 7770..9303 -
1622815529.5583105-UTR-L-elsbetiae_contig1363:13960..140301622815529.5583105-UTR-L-elsbetiae_contig1363:13960..14030Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1363 13961..14030 -
1691682942.6420407-UTR-L-elsbetiae_contig1363:13960..140301691682942.6420407-UTR-L-elsbetiae_contig1363:13960..14030Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1363 13961..14030 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815529.4655786-CDS-L-elsbetiae_contig1363:9303..94621622815529.4655786-CDS-L-elsbetiae_contig1363:9303..9462Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 9304..9462 -
1691682942.5861287-CDS-L-elsbetiae_contig1363:9303..94621691682942.5861287-CDS-L-elsbetiae_contig1363:9303..9462Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 9304..9462 -
1622815529.481672-CDS-L-elsbetiae_contig1363:9924..100051622815529.481672-CDS-L-elsbetiae_contig1363:9924..10005Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 9925..10005 -
1691682942.5999327-CDS-L-elsbetiae_contig1363:9924..100051691682942.5999327-CDS-L-elsbetiae_contig1363:9924..10005Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 9925..10005 -
1622815529.4934847-CDS-L-elsbetiae_contig1363:10209..103111622815529.4934847-CDS-L-elsbetiae_contig1363:10209..10311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 10210..10311 -
1691682942.6083114-CDS-L-elsbetiae_contig1363:10209..103111691682942.6083114-CDS-L-elsbetiae_contig1363:10209..10311Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 10210..10311 -
1622815529.5101843-CDS-L-elsbetiae_contig1363:11795..119521622815529.5101843-CDS-L-elsbetiae_contig1363:11795..11952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 11796..11952 -
1691682942.616259-CDS-L-elsbetiae_contig1363:11795..119521691682942.616259-CDS-L-elsbetiae_contig1363:11795..11952Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 11796..11952 -
1622815529.5291238-CDS-L-elsbetiae_contig1363:12241..124591622815529.5291238-CDS-L-elsbetiae_contig1363:12241..12459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 12242..12459 -
1691682942.6244621-CDS-L-elsbetiae_contig1363:12241..124591691682942.6244621-CDS-L-elsbetiae_contig1363:12241..12459Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 12242..12459 -
1622815529.544934-CDS-L-elsbetiae_contig1363:13726..139601622815529.544934-CDS-L-elsbetiae_contig1363:13726..13960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 13727..13960 -
1691682942.6330097-CDS-L-elsbetiae_contig1363:13726..139601691682942.6330097-CDS-L-elsbetiae_contig1363:13726..13960Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1363 13727..13960 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1363.2763.1

>prot_L-elsbetiae_contig1363.2763.1 ID=prot_L-elsbetiae_contig1363.2763.1|Name=mRNA_L-elsbetiae_contig1363.2763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=317bp
MRSRAVAVLAVARLASGYVSTSWTTSTWVAPHRCAARCSYPRRGLSRYRA
QPSAVIGGESTSAGGGVGTQLIAKPPLKVIRGRAGPADATPTYDDTRPLD
RVLLGLFRSKLAEEVGGEGDVYEPGYDGLMEMIKVLNEKHPSKRQTQEAS
RRVLKSLFPSWLPARFAVMFSKPFPAFSSRLNAWVTLIASQWLMGPSQLN
DIETDGGTVGAGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGL
ALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQQDQP
AVARCHQIDIDEDSGP*
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mRNA from alignment at L-elsbetiae_contig1363:7770..14030-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1363.2763.1 ID=mRNA_L-elsbetiae_contig1363.2763.1|Name=mRNA_L-elsbetiae_contig1363.2763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6261bp|location=Sequence derived from alignment at L-elsbetiae_contig1363:7770..14030- (Laminarionema elsbetiae ELsaHSoW15)
TGACTGTGACGCCAACCGGCTCGTAGCAGCTCGACGCCGCCAGCCTACAC
CCATAACCAAGGGTAGATCTATGAGGTCGAGAGCTGTTGCAGTGCTCGCG
GTAGCTCGACTAGCTTCTGGCTACGTTTCCACCTCGTGGACAACATCAAC
ATGGGTTGCACCGCACCGATGCGCCGCAAGATGTAGCTATCCGCGGCGTG
GGCTCTCACGATATCGCGCACAGCCTTCGGCTGTGATTGGTGGCGAAAGC
ACGTCTGCGGGTGGTGGTGTCGGCACTCAGCTTATTGCGAAGCCTCCTCT
CAAGGTAATCAACGGCGGTGGGGGGGGAGGGGGCAGGGATCATGTGTATT
ACAAGATGTTGTACTGCGCCTACGGATTCTTGCCTTACCAGCCAGCTGGT
ATCACGATCATTGTAGATACATAACTGCATATTTACGACTTGACAGAGAA
ACAGCCCCCCTGAATTATTCGCACAACGACGTGAAAAAATCGCGGTACCC
ACCCATGGCAACGATTCGAACAAATCCGACCCCGCTCGGGTTGTATTCAT
GTAATTTAGAGCATGGTGTAAGCTAAAACGGTACTAGTTGTTGGTGGTAT
TCGGAGCCCCACAGTCGGGGTACGGACTCCTCGTAACTGCTTCAAGCTGT
GTGCAATGCAACACGTGTGTGTGTGTCCCGTGCGCTAGCGGTGTGAGACC
AACCCCCAGTTGACACCCCCGGCCGCATCCCACTTGTCAGTTGGTCCCCC
CGTCCGCTCTCGCCAACCCCCTGTCCTTTTTGTTGTCCGCATCCGCGGAT
TCGCGTGAACACCATAGCAGCGTGCTCTCGGCGCAGGGTAAAGCCATACC
TCTCGAGAGTTGGCCCGACACCGGCAGTGTTACGTGCAATGGGAGATATG
CTGGATGGTATTGTAGCCACGATGAAAGCGTGGAGCAAAGCCGCTCGTAC
TGTTTTTGCTCTAGAACGGAGAGCGGCAACAGCCTTCAAGGGGAGGGGGT
CGTTATTGGACGTTTATTGCACCTTACAGAGCGAGGAGATGGCGGCGTGA
AATGAAACAGAGAGCATTCGATCGGTCTTGCATGCAGCTTTCGCGGAACG
CCTTGGTGATGCTGATATGCTGGTGCGTGCTGAGCTCGTCGCACGAGTTG
AAAAACGAGGTTCTGCCACGAGCAGATCCAAACACGACTCGTCCCGGTGT
ACGACACAGCAAGTACCAACAGGTCTGCCCTATTTTGCGCTTTGGTGCAA
GCCCTTGGTGGTCGCGACCTGGGCCGAAACGATTACACAAGGCGTACAAC
ACGCCGTCTAGAAAAAAACGCAAGACACAGACAGACAGACACCATCAACA
TCATTTTTTTTTAAACGCAGCCCTCAGCATATACTTTTTCACGAAATCCG
ACCTGCTATATTCTAGGAACCTGTTCGTTGCCGGGCTCCTCATTAAAATG
GGCATCTCCGGAGACCCGAAGGGCCTTCCGATCTTGCAGAGGCTGCCCTC
CATCCGTGTGCACCTCTGCTGCCGAAAAGCAAAATCGCTGTTCACGTCCC
GTTTATGCATGCATGCATCAGGTAATCCGGGGCCGAGCAGGTCCCGCCGA
CGCAACCCCCACCTACGACGACACGCGACCCTTGGATCGCGTGCTGCTGG
GCCTCTTTCGGTCGAAGCTGGCGGAAGAGGTCGGCGGGGAAGGCGATGTC
TACGAGCCCGGTTACGACGGCCTGATGGAGATGATCAAGGTGCTGAACGA
GAAACATCCTTCCAAAAGGCAGACGCAGGAAGCGTCCCGGTGCGTTTGTT
TGTCGGGAGATATGTAGTAATAGTAGGCTAATACGCAGGGTCATGGAAGC
GGCGGACGAGCGGGTTTTGGGAACCGGTGGTGGCTGAAACGTCCAGCGCA
AAGTGTGGAGAGAGAGGCCAATAAGCTTCTTAGCCAAGGCTCGTAAGTGC
TCTCTCTCTCATAAATATATAGAAGTATAGAAGTATATATATCTCCTTTC
CCCCTCCAAACCATTCCTACACCCCCCCCCCCCCACGCGTCACCCGTCCC
CCTTGGTCGCCTGTCTCTTTCGACAAAGGCGGGTGCTGAAGTCCCTCTTC
CCGTCCTGGTTGCCGGCGCGCTTCGCGGTGATGTTCTCCAAACCCTTCCC
GGCTTTCTCGTCCCGCTTGAACGCTTGGGTCACCCTCATCGCGTCTCAGT
GGCTCATGGGGCCGTCGCAGCTGAACGATATCGAGGTGTGTATATCTATT
ACCTGCTATTTTTGAGAGGAACCGCACTGACCACTGCTGTGGAGATAATT
TGGAAAATGACACGGAGTACTTCTATTAATTTTGGGGGTCTGACACCGGT
GTTTATAGAAGCATATAGCATTTCTTTCACGAAAATCTTGATCTTTTGGT
CAAGGTTTTCCTGTCAATATTCGGCAAAATAAGATTTTGTGCCAGCTACG
TATATATGTATAGGGGAAGTATCTTTGATTTGCTCGAACTTTTGCCGACC
GCGGTGGAAATTGGTCTCGCCGGTTGTCACACGATTTATGCTGACTTACC
ACCAATGCGCCACGAAACTAGAACGTAGCGAGCTCGAAAAAGAGCCCCGG
CCAAACGAAAAGCTTCGGTGTTGAGCTGTTGGCCGTCGAATCGTACCAAA
GGTTCCTTCCTCTCAGGCATACAAACACATTTTTTAGGGGTAGCGTCAAG
TAGCGTCGGTGCATTTCACGCCCCAGCGGCCAAAACAATCGCCGGCCGAG
AGAGCTCACTACATTGCACTCCAGCTCTCGCCCGCTACATAGACCATTTA
TTTATGTGAAAGCTTCTTGGCTGTCACCTCGACAAACGTATCTCGTCCGG
GTGGGCGGGGGTTGGTAGTGGGCGTCTTCAGTCGGCAGCAAATCACATCG
CCGTGGACACGAGTGTGCAACACGTGAGCAATCCGGCGTTTGTTTTTTAC
TGAGTACAGACGACTTATTCACCCGCAAAAAGAAAGAACACGCAGAACAC
TCGTGTCCACGGCGATGCGATTTGCTGCCGGCTGAAGGCGCCCATTGCCA
ACCCACGCCCACTCCGATGAGACGCATTTGTGGAGGTGACGCCAAGAAGT
TATCGATTTTTTCGCAGGCCGGACGTAGACTGCTGACATTTGTAACATTA
ATTATAAATATACGGTCTTTAGCGGGCGAGAGCTGGACTGCGACGTCGTT
TGCCCCTCACGCAGCAGGCGGATTTTCTGCTGTTTCAAGGCGCAAGCGTT
GCTTCCTCCAGACACTCTGCACAAACCTTTTTTCCCACACGACCTACGGG
CTTCCGCCATATACCAGCGGCTAGGGTTATCCGGAGCAGCTTACAAATTC
TTCACGTTCAGTATTGAGGGCGCAGTGGTCGGTGCTGGCGACTGGAGTCT
GCAGGAGAAATAATCTCGCCGCCTCCGGGCAAGATTTTGTCGAGCTGCCA
GATGATCAAATGTTAATGTTGGGCCAACGTTTGCTCGAAAGCCAACATTT
TGGCCGGAAATCAAATCTCGGGCAAGGTTTTGTCAAACATGTTCTCCCAT
AAAACAACGAAATAAAAACCTCTTGCTCAAAGATCAAGATTTTTGTCAAA
GGTTTTTCTACGTATAAATAAACACCGGTGTGAAACTAAACTTTCGACCA
CTCGACTTGTTGTTGAATGATGGTGGGCGATCCGTGTGTCACTTGCCGCA
CCACCATTCCCCTCCGCAGACCGACGGCGGGACTGTTGGTGCCGGCCACG
GTCTCCTAGTGGAGCGCTGCAGGTTCCTGGAGGCGGCCGGGTGCGCCTCG
GTGTGTATGAACACGTGCAAGGTGAGCCAAAACATGTGCATCTGGTGACC
GAATATTTATTAGCGGGTTGCAGCTTTTTGGTGTGCTTGTTTTCCTCCCT
TTTGGTGGTGGCGCCTGTGGAAACTGGTGGCCGTGCGGCGAATTGTTGCA
GGCGTTTTCGCCCGCCCTTGTCGTGGCACGACTGCAACGTGGTTTCCCTG
CGCTTATGCTTGTGAACACCCCCAGGTACCCACGGAAGAATTCTTTGCGA
AGGACATGGGATTGGCGCTCGAGATGACACCAAATTACGAGGACTTTAGT
TGCCAGGTACGTACACATGTACATGAGTAGCGTCAGGTCGTTTCCCGAAG
CGACAGGGCAAGAAATCAAGTAATGAAACCAACGAACTACACCGACGCCA
ACACGCAGAATCCACAAGAAAAGTGGGCGTTGTTTCATGTTCTGTTCATG
CAAACATCGAATCGAAAAATGCGATCCTCAGAGGACATAAAGAGGGGGTG
GTTAGAACAGCTTTATCAATTGCAACTCACTCGTAACTATTGTTTTACCG
AAACATTTCCTGTTGTGGCCGCTGATGGGTGTTTTCGGAACGGTTTGCCC
CGACGCGTGCTTCCCATCCATTCTGACTGTGTCTTGGCTCAGTCTGAAAC
AACTCCCGCTTTTGGACACCCAATGCTTGACCTCTTTACCTATACTACGA
CTTGTTAGTCACCGCTGTCGGCGCGTTTCGGCCTGTTTGAATTATTTTTT
GCCCTCCGATCACCGCAGTTTTCGTTCAACAAGACTCCGCTGGCAAGGGA
TATGGATGAGGCGTTCCGGGTTGCGTGTTTCGAGCAGTGCCCGTCCAGGG
GAGCGCTTAGACAGCAGGATCAGCCGGCTGTTGCGCGGTGCCACCAAATC
GATATCGATGAAGACAGCGGCCCGTAAATGCATTGGATTCTATAATTGAT
AATTTGCATTTTTTTTTTAGTATAGGCGGGACTCGAATGTTTCGTATTTG
TGTTGCGCCAATCACAAGAGTTTCGATTTTCGTGGCGCAAATAGTGTTAT
GATGGGTGTTTTAAGACGTCGGGGGAAACCGCAAAACCCTTGGCAGCGGA
TACGACCTGTTAGTTCGTGGACAAGTAGTCAACAACCACGCGCCTCCGAT
ATCGATGAGGACGGTAGCGCATAGCTGTAGTTGATCCAGGGACCCGTGAT
AACTAGCGCCACCGTCAAAATAGTTTTCGAGAGCAGCAGGCTTCATCCGG
TCCGTGCACAACAATTTGGCCAATACTTTCCTCAGCACCCGCGGGTACAC
TTTTGTCCAGACAGGGGTGGTTGTTCGGAAATCTGAAAGTACTGGCAAAC
GCCCTGTCTCCAGGCGCAGCTCGTGACGGAGTTTTGTTTTGTCCTTCCTA
GTCTTTTTATCAGAGAAAAACCGGGAAAACTTGTATTCTTTTTCCTGAGG
TGTGGTGTACGCCGATTCGAAACAGCTCAACGGATTTGAGCGTATCTCGA
AATTTGCCAGACTTGTTTTTTTTATAAATTAATTGAAATTGACGGAGATA
TCGGGGATAAACTGGATTTAGAGGGTCAACTTGTAAGCTTTTATACAAGA
TAACTAACCAACCGATTTAAAAATAGAGTGCGGCAAACGATTCCTCTCAT
CAATCCCCAGACCTGTTTTTTTTAAGTTTTCGGGAAAACTCTGGTTGTCG
AGAAAATCCACCTTTTTGTTTTGCAGTCATTTTTCAGTATAGTGTGGGGG
TGCAGCAAATGTCTGCGGGGCTCCGTGGTGTATAAGGGGGCTCCGTGGCG
CGGAAATTTGGTCAAAAATAATGCATTTTCTCGAAATGAAAAAACTCTGC
TGCAATCGACGCAGCTCGACGAGGCGGTCACGATTATCGTTGTTTCACGT
TCCAAATATTTCTCTGACAAAAGTTATCGCACAAAACGCGATTGGCCAAA
TTGTTGTGCACGGACCATATGTAGAGTTTGAGACGAGAAGGGTAAGAGAG
GGGAATTGTGTCGCTACGTGTGTGTTCTGCCGTCTACTCTCGCATGCCTC
CGGATCCGGGACTGGGTATATGCCGGGGTGTTTGCCGATCCGGCGAGCAT
CCATCATAACCACCAGGTGTTCGAGAAGGGGCAGTAGTGGGAGGGCGTAA
GGGTGCTGCACCAGATTAGACACGTACAATCTACAATCGTTGTCGAGCGA
TGTCCACTCTGTTGCGGGTACTTCTTATTGTAGCACGGTACTCCTGCAGG
TTCGCACGGACGGTACCACAAGTGGTCCGTTTTTAGGTACGAGAGTGGCC
GATGACGGGGGGAGAAACAATGAGGACGAGCGCATGTGGTGGGTTTTTCA
AGCCGCACAAACTGGGGCTAGTAGTGAAGCCGAGACAGCCGGCAACGGGG
TTGGACACCAAGTCAAGGACTGCAGTAGTTGGAGTGTTTATCGCAGAACA
GAGAGCCGCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1363:7770..14030-

>mRNA_L-elsbetiae_contig1363.2763.1 ID=mRNA_L-elsbetiae_contig1363.2763.1|Name=mRNA_L-elsbetiae_contig1363.2763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1902bp|location=Sequence derived from alignment at L-elsbetiae_contig1363:7770..14030- (Laminarionema elsbetiae ELsaHSoW15)
ATGAGGTCGAGAGCTGTTGCAGTGCTCGCGGTAGCTCGACTAGCTTCTGG
CTACGTTTCCACCTCGTGGACAACATCAACATGGGTTGCACCGCACCGAT
GCGCCGCAAGATGTAGCTATCCGCGGCGTGGGCTCTCACGATATCGCGCA
CAGCCTTCGGCTGTGATTGGTGGCGAAAGCACGTCTGCGGGTGGTGGTGT
CGGCACTCAGCTTATTGCGAAGCCTCCTCTCAAGATGAGGTCGAGAGCTG
TTGCAGTGCTCGCGGTAGCTCGACTAGCTTCTGGCTACGTTTCCACCTCG
TGGACAACATCAACATGGGTTGCACCGCACCGATGCGCCGCAAGATGTAG
CTATCCGCGGCGTGGGCTCTCACGATATCGCGCACAGCCTTCGGCTGTGA
TTGGTGGCGAAAGCACGTCTGCGGGTGGTGGTGTCGGCACTCAGCTTATT
GCGAAGCCTCCTCTCAAGGTAATCCGGGGCCGAGCAGGTCCCGCCGACGC
AACCCCCACCTACGACGACACGCGACCCTTGGATCGCGTGCTGCTGGGCC
TCTTTCGGTCGAAGCTGGCGGAAGAGGTCGGCGGGGAAGGCGATGTCTAC
GAGCCCGGTTACGACGGCCTGATGGAGATGATCAAGGTGCTGAACGAGAA
ACATCCTTCCAAAAGGCAGACGCAGGAAGCGTCCCGGTAATCCGGGGCCG
AGCAGGTCCCGCCGACGCAACCCCCACCTACGACGACACGCGACCCTTGG
ATCGCGTGCTGCTGGGCCTCTTTCGGTCGAAGCTGGCGGAAGAGGTCGGC
GGGGAAGGCGATGTCTACGAGCCCGGTTACGACGGCCTGATGGAGATGAT
CAAGGTGCTGAACGAGAAACATCCTTCCAAAAGGCAGACGCAGGAAGCGT
CCCGGCGGGTGCTGAAGTCCCTCTTCCCGTCCTGGTTGCCGGCGCGCTTC
GCGGTGATGTTCTCCAAACCCTTCCCGGCTTTCTCGTCCCGCTTGAACGC
TTGGGTCACCCTCATCGCGTCTCAGTGGCTCATGGGGCCGTCGCAGCTGA
ACGATATCGAGGCGGGTGCTGAAGTCCCTCTTCCCGTCCTGGTTGCCGGC
GCGCTTCGCGGTGATGTTCTCCAAACCCTTCCCGGCTTTCTCGTCCCGCT
TGAACGCTTGGGTCACCCTCATCGCGTCTCAGTGGCTCATGGGGCCGTCG
CAGCTGAACGATATCGAGACCGACGGCGGGACTGTTGGTGCCGGCCACGG
TCTCCTAGTGGAGCGCTGCAGGTTCCTGGAGGCGGCCGGGTGCGCCTCGG
TGTGTATGAACACGTGCAAGACCGACGGCGGGACTGTTGGTGCCGGCCAC
GGTCTCCTAGTGGAGCGCTGCAGGTTCCTGGAGGCGGCCGGGTGCGCCTC
GGTGTGTATGAACACGTGCAAGGTACCCACGGAAGAATTCTTTGCGAAGG
ACATGGGATTGGCGCTCGAGATGACACCAAATTACGAGGACTTTAGTTGC
CAGGTACCCACGGAAGAATTCTTTGCGAAGGACATGGGATTGGCGCTCGA
GATGACACCAAATTACGAGGACTTTAGTTGCCAGTTTTCGTTCAACAAGA
CTCCGCTGGCAAGGGATATGGATGAGGCGTTCCGGGTTGCGTGTTTCGAG
CAGTGCCCGTCCAGGGGAGCGCTTAGACAGCAGGATCAGCCGGCTGTTGC
GCGGTGCCACCAAATCGATATCGATGAAGACAGCGGCCCGTAATTTTCGT
TCAACAAGACTCCGCTGGCAAGGGATATGGATGAGGCGTTCCGGGTTGCG
TGTTTCGAGCAGTGCCCGTCCAGGGGAGCGCTTAGACAGCAGGATCAGCC
GGCTGTTGCGCGGTGCCACCAAATCGATATCGATGAAGACAGCGGCCCGT
AA
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