mRNA_L-elsbetiae_contig13621.2759.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13621.2759.1
Unique NamemRNA_L-elsbetiae_contig13621.2759.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: A0A4S4M162_9AGAM (Uncharacterized protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4M162_9AGAM)

HSP 1 Score: 166 bits (420), Expect = 6.120e-47
Identity = 74/108 (68.52%), Postives = 90/108 (83.33%), Query Frame = 1 
Query:    1 VKGMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            ++GMQHKYRET LFF TE QYCHS+CTYCFRWAQFTAVGS QQF SKD ++L DY++ANRD++D+LFTGGDPMVM+AQQ S Y+D +L DP  + ++TIR GTK   Y
Sbjct:  162 IEGMQHKYRETCLFFPTEGQYCHSYCTYCFRWAQFTAVGSDQQFQSKDVQQLVDYIKANRDITDLLFTGGDPMVMHAQQFSRYIDALLADPGTEVLSTIRIGTKSLSY 269
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: A0A0W0G5T7_9AGAR (Uncharacterized protein n=2 Tax=Moniliophthora roreri TaxID=221103 RepID=A0A0W0G5T7_9AGAR)

HSP 1 Score: 164 bits (415), Expect = 3.880e-46
Identity = 75/108 (69.44%), Postives = 88/108 (81.48%), Query Frame = 1 
Query:    1 VKGMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            V+GMQHKYRET LFF TE QYCHS+CTYCFRWAQFTAVGS QQF SKD  +L DYL+ANRDV+D+LFTGGDPMVM+ QQ + YVD +L  P  +++ATIR G+K   Y
Sbjct:  173 VEGMQHKYRETCLFFPTEGQYCHSYCTYCFRWAQFTAVGSDQQFQSKDVTQLVDYLKANRDVTDILFTGGDPMVMHTQQFARYVDALLSSPGTENLATIRIGSKSLSY 280
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: UPI000C04B65E (LOW QUALITY PROTEIN: uncharacterized protein LOC111321303 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C04B65E)

HSP 1 Score: 160 bits (405), Expect = 9.000e-46
Identity = 71/106 (66.98%), Postives = 86/106 (81.13%), Query Frame = 1 
Query:    7 GMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            GMQHKYRET+LFF TE Q+CH+FCTYCFRWAQFT+VGS Q F S D+EKL  Y+R ++ + DVLFTGGDPMVM  +QL  Y++P+LQDP+LDH+ TIR GTK   Y
Sbjct:   56 GMQHKYRETVLFFPTEGQWCHTFCTYCFRWAQFTSVGSQQAFQSYDTEKLACYIRKHKGIKDVLFTGGDPMVMTTKQLERYINPLLQDPTLDHLRTIRIGTKSLAY 161
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: UPI00077AA6B7 (putative L-lysine 2,3-aminomutase aq_1632 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077AA6B7)

HSP 1 Score: 160 bits (404), Expect = 1.210e-45
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    7 GMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            GMQHKYRET+LFF  E Q+CH+FCTYCFRWAQFTAVGS Q F S D+ KL +YLR ++  +DVLFTGGDPMVM ++QL  Y+DP+LQDP LDH+ TIR GTK   Y
Sbjct:   56 GMQHKYRETVLFFPAEGQWCHTFCTYCFRWAQFTAVGSPQAFQSYDTVKLTNYLREHKGTTDVLFTGGDPMVMTSKQLQRYIDPLLQDPGLDHLRTIRIGTKSLAY 161
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: UPI001CF19DE2 (putative L-lysine 2,3-aminomutase aq_1632 n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF19DE2)

HSP 1 Score: 160 bits (404), Expect = 1.460e-44
Identity = 72/106 (67.92%), Postives = 85/106 (80.19%), Query Frame = 1 
Query:    7 GMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            GMQHKYRET+LFF  E Q+CH+FCTYCFRWAQFTAVGS Q F S D+ KL +YLR ++  +DVLFTGGDPMVM ++QL  Y+DP+LQDP LDH+ TIR GTK   Y
Sbjct:  189 GMQHKYRETVLFFPAEGQWCHTFCTYCFRWAQFTAVGSPQAFQSYDTVKLTNYLREHKGTTDVLFTGGDPMVMTSKQLQRYIDPLLQDPGLDHLRTIRIGTKSLAY 294
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: E6ZUE4_SPORE (Uncharacterized protein n=3 Tax=Sporisorium TaxID=63265 RepID=E6ZUE4_SPORE)

HSP 1 Score: 157 bits (397), Expect = 8.920e-44
Identity = 73/106 (68.87%), Postives = 83/106 (78.30%), Query Frame = 1 
Query:    7 GMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            G+QHKYRET+LFF TE QYCHSFCTYCFRWAQFTAVGS Q F SKD+ +L +YL  +RDVSD+LFTGGDPMVM  +    Y+ PILQD  L H+ATIR GTK   Y
Sbjct:  122 GIQHKYRETVLFFPTEGQYCHSFCTYCFRWAQFTAVGSEQAFQSKDAHRLVEYLARSRDVSDLLFTGGDPMVMKTKHWQNYLLPILQDKRLGHIATIRIGTKSLAY 227
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: A0A4U7KTR9_9BASI (Uncharacterized protein n=1 Tax=Sporisorium graminicola TaxID=280036 RepID=A0A4U7KTR9_9BASI)

HSP 1 Score: 157 bits (397), Expect = 1.070e-43
Identity = 73/106 (68.87%), Postives = 82/106 (77.36%), Query Frame = 1 
Query:    7 GMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            G+QHKYRET+LFF  E Q+CHSFCTYCFRWAQFTAVGS Q F SKD EKL ++L A+ DVSD+LFTGGDPMVM       Y+DPIL DP L H+ATIR GTK   Y
Sbjct:  120 GVQHKYRETVLFFPMEGQFCHSFCTYCFRWAQFTAVGSGQGFQSKDVEKLTNHLAASPDVSDLLFTGGDPMVMKTHHWENYLDPILNDPRLGHIATIRIGTKSLAY 225
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: A0A6A4I950_9AGAR (Uncharacterized protein n=1 Tax=Gymnopus androsaceus JB14 TaxID=1447944 RepID=A0A6A4I950_9AGAR)

HSP 1 Score: 157 bits (397), Expect = 1.620e-43
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = 1 
Query:    1 VKGMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            ++GMQHKYRET LFF TE QYCHS+CTYCFRWAQFTAVGS QQF SK++ +L DY+  NRD++D+LFTGGDPMVM+A+Q   Y+D +L  P  +++AT+R GTK   Y
Sbjct:  174 IEGMQHKYRETCLFFPTEGQYCHSYCTYCFRWAQFTAVGSDQQFQSKEAGQLIDYISTNRDITDLLFTGGDPMVMHARQFGRYIDALLFGPGTENLATVRIGTKSLSY 281
[Close]
BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: A0A1S3J7I0_LINUN (uncharacterized protein LOC106170480 isoform X2 n=5 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3J7I0_LINUN)

HSP 1 Score: 157 bits (396), Expect = 3.880e-43
Identity = 71/102 (69.61%), Postives = 84/102 (82.35%), Query Frame = 1 
Query:    7 GMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTK 312
            GMQHKYRET+LFF +E Q+C +FCTYCFRWAQFT+VGS QQF S D + LR YLR N+ VSDVLFTGGDPMVM A+Q   Y+ P++ DP+LDHVAT+R GTK
Sbjct:  220 GMQHKYRETVLFFPSEGQFCQAFCTYCFRWAQFTSVGSQQQFQSTDGDLLRAYLRTNKCVSDVLFTGGDPMVMTARQWQRYLLPLINDPTLDHVATVRIGTK 321
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BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Match: A0A6V1NMA6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NMA6_HETAK)

HSP 1 Score: 157 bits (396), Expect = 4.350e-43
Identity = 71/106 (66.98%), Postives = 82/106 (77.36%), Query Frame = 1 
Query:    7 GMQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLRDYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGTKVCLY 324
            G+QHKYRET LFF  EAQYC SFCTYCFRWAQFT+VGS QQF+ K+   +  YL+ANR++SDVLFTGGDPMVM A     Y+DPIL DP +D +ATIR GTK   Y
Sbjct:  225 GLQHKYRETALFFPMEAQYCQSFCTYCFRWAQFTSVGSKQQFSCKEENVIHKYLKANRNISDVLFTGGDPMVMKAHHFRKYLDPILADPDMDQLATIRIGTKSLAY 330
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13621.2759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4S4M162_9AGAM6.120e-4768.52Uncharacterized protein n=1 Tax=Bondarzewia mesent... [more]
A0A0W0G5T7_9AGAR3.880e-4669.44Uncharacterized protein n=2 Tax=Moniliophthora ror... [more]
UPI000C04B65E9.000e-4666.98LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
UPI00077AA6B71.210e-4567.92putative L-lysine 2,3-aminomutase aq_1632 n=1 Tax=... [more]
UPI001CF19DE21.460e-4467.92putative L-lysine 2,3-aminomutase aq_1632 n=2 Tax=... [more]
E6ZUE4_SPORE8.920e-4468.87Uncharacterized protein n=3 Tax=Sporisorium TaxID=... [more]
A0A4U7KTR9_9BASI1.070e-4368.87Uncharacterized protein n=1 Tax=Sporisorium gramin... [more]
A0A6A4I950_9AGAR1.620e-4363.89Uncharacterized protein n=1 Tax=Gymnopus androsace... [more]
A0A1S3J7I0_LINUN3.880e-4369.61uncharacterized protein LOC106170480 isoform X2 n=... [more]
A0A6V1NMA6_HETAK4.350e-4366.98Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13621contigL-elsbetiae_contig13621:217..811 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score154.1
Seed ortholog evalue3.8e-35
Seed eggNOG ortholog72558.CBQ70851
KEGG rclassRC00303
KEGG koko:K01843
KEGG ReactionR00461
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
EggNOG free text desc.lysine 2,3-aminomutase activity
EggNOG OGs2S4VX@2759,38HTV@33154,3P09K@4751,COG1509@1
EC5.4.3.2
COG Functional cat.E
Best tax levelFungi
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons2
Model size330
Cds size321
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13621.2759.1prot_L-elsbetiae_contig13621.2759.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13621 217..802 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815529.141104-CDS-L-elsbetiae_contig13621:216..3671622815529.141104-CDS-L-elsbetiae_contig13621:216..367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13621 217..367 -
1691682942.4205103-CDS-L-elsbetiae_contig13621:216..3671691682942.4205103-CDS-L-elsbetiae_contig13621:216..367Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13621 217..367 -
1622815529.1550384-CDS-L-elsbetiae_contig13621:632..8021622815529.1550384-CDS-L-elsbetiae_contig13621:632..802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13621 633..802 -
1691682942.433564-CDS-L-elsbetiae_contig13621:632..8021691682942.433564-CDS-L-elsbetiae_contig13621:632..802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13621 633..802 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815529.166207-UTR-L-elsbetiae_contig13621:802..8111622815529.166207-UTR-L-elsbetiae_contig13621:802..811Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13621 803..811 -
1691682942.4537058-UTR-L-elsbetiae_contig13621:802..8111691682942.4537058-UTR-L-elsbetiae_contig13621:802..811Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13621 803..811 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13621.2759.1

>prot_L-elsbetiae_contig13621.2759.1 ID=prot_L-elsbetiae_contig13621.2759.1|Name=mRNA_L-elsbetiae_contig13621.2759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=107bp
MQHKYRETLLFFATEAQYCHSFCTYCFRWAQFTAVGSSQQFASKDSEKLR
DYLRANRDVSDVLFTGGDPMVMNAQQLSTYVDPILQDPSLDHVATIRFGT
KVCLYR*
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mRNA from alignment at L-elsbetiae_contig13621:217..811-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13621.2759.1 ID=mRNA_L-elsbetiae_contig13621.2759.1|Name=mRNA_L-elsbetiae_contig13621.2759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=595bp|location=Sequence derived from alignment at L-elsbetiae_contig13621:217..811- (Laminarionema elsbetiae ELsaHSoW15)
GTGAAAGGGATGCAGCACAAGTACCGCGAGACGCTTCTCTTCTTCGCGAC
GGAGGCGCAGTACTGCCACAGCTTCTGCACCTACTGCTTCCGGTGGGCGC
AGTTCACCGCGGTCGGATCGAGCCAGCAGTTCGCCTCGAAGGACTCCGAG
AAGCTCCGGGACTACCTGCGAGCGAACAGGTAATGTGCGTAGGTATGATT
CCCATCGTCATCGTCGTCGTCCCCCCCCCCACTGTCTCCCTTGGTCAAGG
CGCCAGCCAATGAAACACCTTGTGCGGTCTCTCTCTCTTTGACCCATGAT
TCCCGTCGTCGCCCCCCCCCCCACTGTCTCCCTTGGTCAAGGCGCCAGCC
AATGAAAACACCTTGTGCGGTCTCTCTCTCTTTGACTCGACCCGACGCTC
GGCCCCCCAACGGGCGGGTCGTAAACCGCGCGCGCCTCTCGCAGAGACGT
CAGCGACGTCCTCTTCACCGGAGGGGACCCGATGGTCATGAACGCGCAGC
AGCTCTCCACCTACGTGGACCCCATCCTGCAGGACCCCTCCCTCGACCAC
GTCGCCACCATCCGGTTCGGCACCAAGGTATGTTTGTACCGGTAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13621:217..811-

>mRNA_L-elsbetiae_contig13621.2759.1 ID=mRNA_L-elsbetiae_contig13621.2759.1|Name=mRNA_L-elsbetiae_contig13621.2759.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=642bp|location=Sequence derived from alignment at L-elsbetiae_contig13621:217..811- (Laminarionema elsbetiae ELsaHSoW15)
ATGCAGCACAAGTACCGCGAGACGCTTCTCTTCTTCGCGACGGAGGCGCA
GTACTGCCACAGCTTCTGCACCTACTGCTTCCGGTGGGCGCAGTTCACCG
CGGTCGGATCGAGCCAGCAGTTCGCCTCGAAGGACTCCGAGAAGCTCCGG
GACTACCTGCGAGCGAACAGATGCAGCACAAGTACCGCGAGACGCTTCTC
TTCTTCGCGACGGAGGCGCAGTACTGCCACAGCTTCTGCACCTACTGCTT
CCGGTGGGCGCAGTTCACCGCGGTCGGATCGAGCCAGCAGTTCGCCTCGA
AGGACTCCGAGAAGCTCCGGGACTACCTGCGAGCGAACAGAGACGTCAGC
GACGTCCTCTTCACCGGAGGGGACCCGATGGTCATGAACGCGCAGCAGCT
CTCCACCTACGTGGACCCCATCCTGCAGGACCCCTCCCTCGACCACGTCG
CCACCATCCGGTTCGGCACCAAGGTATGTTTGTACCGGTAGAGACGTCAG
CGACGTCCTCTTCACCGGAGGGGACCCGATGGTCATGAACGCGCAGCAGC
TCTCCACCTACGTGGACCCCATCCTGCAGGACCCCTCCCTCGACCACGTC
GCCACCATCCGGTTCGGCACCAAGGTATGTTTGTACCGGTAG
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