mRNA_L-elsbetiae_contig1362.2755.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: D7G4R3_ECTSI (PH domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R3_ECTSI) HSP 1 Score: 305 bits (780), Expect = 1.230e-101 Identity = 153/162 (94.44%), Postives = 159/162 (98.15%), Query Frame = 3 Query: 192 METGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPSASMMRNVPGSTPVTPGTASRSAEAWSKEPACCGLCACFSAN 677 ME+GGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDD+SYEE+NDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDP+ASMMRN GS PVTPGTA+RSA+AWSKEPACCGLCACFSAN Sbjct: 1 MESGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDESYEEDNDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPTASMMRNAQGSIPVTPGTATRSADAWSKEPACCGLCACFSAN 162
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A835ZL19_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL19_9STRA) HSP 1 Score: 183 bits (464), Expect = 5.470e-54 Identity = 97/162 (59.88%), Postives = 122/162 (75.31%), Query Frame = 3 Query: 192 METGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPSASMMRNVPGSTPVTPGTASRSAEAWSKEPACCGLCACFSAN 677 M SPPQ+SGYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEIRL+D +D +EEN+G+LF+IELN R+Y M+A++REEAARWVEVLK LQ ++ E+S+ E P A+M+R G + G W K+ C GLC CF A+ Sbjct: 1 MAAARSPPQMSGYLYKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIRLMD--EDPSDEENNGALFSIELNTRIYVMRAASREEAARWVEVLKALQALDAEDSRGHESPHAAMVRAPDG---IGSGEG-----YWKKDDKCFGLCGCFQAS 152
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A836CJC0_9STRA (PH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJC0_9STRA) HSP 1 Score: 178 bits (451), Expect = 5.060e-52 Identity = 98/158 (62.03%), Postives = 120/158 (75.95%), Query Frame = 3 Query: 207 SPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTT--EDPSASMMRNVPGSTPVTPGTASRSAEAWSKEPACCGLCACFSA 674 +PPQ+SGYL KKAKTGKWQ+RWFETNAH+LTYYK++K+EKLLAALNLPQVGEI+LVDPD + + EN+G+LFTIELN RVYTMKA TREEAARWVEVLK LQ M+ ++++ E P AS++R G+ P + W K+ CCG CF A Sbjct: 7 APPQMSGYLHKKAKTGKWQRRWFETNAHFLTYYKTRKVEKLLAALNLPQVGEIKLVDPDPN--DPENNGALFTIELNTRVYTMKAGTREEAARWVEVLKALQAMDVDDARHAGAESPHASIVRTGEGTDAPGPDS------YWRKDSKCCG---CFRA 153
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A4D9CUK8_9STRA (PH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CUK8_9STRA) HSP 1 Score: 122 bits (306), Expect = 1.940e-30 Identity = 78/163 (47.85%), Postives = 100/163 (61.35%), Query Frame = 3 Query: 201 GGSPP----QISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTTEDPSASMMRNVPGSTPVTPGTASRSAEA------WSKEPACCGLC 659 GG+ P +SGYL KK + G+WQKRWFETN +LTYYKSKKM KLLAAL+L QVG I+L + + +EE+ GSLF+IELN+RVYT+KA EAA+WVEVL L+ + +M G+T T+S EA W K+ CCG+C Sbjct: 7 GGTVPGDVVMVSGYLHKKTRDGRWQKRWFETNGCFLTYYKSKKMTKLLAALDLVQVGTIKLTEVPEPG-DEEDLGSLFSIELNERVYTLKAGNDVEAAKWVEVLNQLKVG-----------GSDVMPTCAGNTV----TSSMEIEAGGGETEWKKKLQCCGIC 153
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A6U4KSE8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KSE8_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.180e-30 Identity = 61/99 (61.62%), Postives = 79/99 (79.80%), Query Frame = 3 Query: 219 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQT 515 I GYL K+ K +WQKRWFETN +LTYYKS+KM+K+LAALNLPQVGEI+L+ + + + +NDG+LFTIEL RVYT++A R+ AA+WVEVL L+T Sbjct: 25 IQGYLHKRTKDMRWQKRWFETNGCFLTYYKSRKMDKILAALNLPQVGEIKLLP--ESAADPDNDGTLFTIELKARVYTLRAPNRKNAAKWVEVLNELKT 121
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A482RVG4_9ARCH (PH domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RVG4_9ARCH) HSP 1 Score: 115 bits (289), Expect = 1.790e-28 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 219 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 509 ISGYL K+ + G+WQKRWFETN YLTYYKS+KMEKLLAAL+LPQVGEI++V P+ D+ ++E LF+IELN RVY ++A + EA +WV L L Sbjct: 9 ISGYLYKRTRDGRWQKRWFETNGVYLTYYKSRKMEKLLAALSLPQVGEIKVVLPEQDAEKQEG---LFSIELNTRVYILRAKSSAEADQWVSTLNKL 102
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A7S2DE48_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DE48_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.920e-28 Identity = 64/118 (54.24%), Postives = 81/118 (68.64%), Query Frame = 3 Query: 189 TMETGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVLQTMEEEESKTT 542 T G P +GYLQKK K GKWQKRWFETN +LTYYK++KM+KLLAA+ LP+VGEI L+DP D+ + G LF+I+LN R Y +KA + EA WV K+L ++E ESK T Sbjct: 4 TEPKSGKEPYKNGYLQKKTKQGKWQKRWFETNGIFLTYYKNQKMKKLLAAVKLPEVGEISLIDPHPDNDDTVEPG-LFSIQLNSREYILKAESHPEAVEWV---KILTKLKESESKDT 117
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A7S2WTC5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTC5_9STRA) HSP 1 Score: 115 bits (289), Expect = 3.150e-27 Identity = 60/97 (61.86%), Postives = 75/97 (77.32%), Query Frame = 3 Query: 219 ISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVLKVL 509 I GYLQKK + G+WQKRWFETN +LTYYK+KKM KLLAALNLPQVGEI+L+D S + ++ G+LF+I LNDR Y +KA+ RE+A WV L +L Sbjct: 46 IHGYLQKKTRDGRWQKRWFETNGCFLTYYKNKKMAKLLAALNLPQVGEIKLLDTGH-SDDVDSSGALFSIALNDREYMLKAAKREDAEVWVTKLNLL 141
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A7S2G8J6_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G8J6_9STRA) HSP 1 Score: 114 bits (284), Expect = 6.910e-27 Identity = 55/92 (59.78%), Postives = 74/92 (80.43%), Query Frame = 3 Query: 225 GYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDGSLFTIELNDRVYTMKASTREEAARWVEVL 500 GYLQKK K+G+WQ+RWFETN +LTYYK+KKM KLLAA+NLPQVG+I +++PD ++ ++ DG F+I+LN R Y +KA+ EEA WV+VL Sbjct: 32 GYLQKKTKSGQWQRRWFETNGVFLTYYKNKKMSKLLAAVNLPQVGDIAVMEPDAEN-DDTVDGGCFSIQLNSREYILKAADHEEALAWVKVL 122
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Match: A0A1W0A4A7_9STRA (PH domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4A7_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.140e-25 Identity = 60/96 (62.50%), Postives = 71/96 (73.96%), Query Frame = 3 Query: 216 QISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALNLPQVGEIRLVDPDDDSYEEENDG-SLFTIELNDRVYTMKASTREEAARWVEVL 500 ++ GYL KK + GKWQKRWFETN +LTYYK K+ +KLLAALNLPQVGEI L+ E DG LFTIELNDR+YT+KA +E+AA WVE L Sbjct: 5 ELRGYLLKKTRNGKWQKRWFETNRCFLTYYK-KQGQKLLAALNLPQVGEITLLP------ENTEDGPGLFTIELNDRIYTIKAKNQEDAALWVEAL 93 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1362.2755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1362.2755.1 >prot_L-elsbetiae_contig1362.2755.1 ID=prot_L-elsbetiae_contig1362.2755.1|Name=mRNA_L-elsbetiae_contig1362.2755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=163bp METGGSPPQISGYLQKKAKTGKWQKRWFETNAHYLTYYKSKKMEKLLAALback to top mRNA from alignment at L-elsbetiae_contig1362:14053..21750+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1362.2755.1 ID=mRNA_L-elsbetiae_contig1362.2755.1|Name=mRNA_L-elsbetiae_contig1362.2755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7698bp|location=Sequence derived from alignment at L-elsbetiae_contig1362:14053..21750+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1362:14053..21750+ >mRNA_L-elsbetiae_contig1362.2755.1 ID=mRNA_L-elsbetiae_contig1362.2755.1|Name=mRNA_L-elsbetiae_contig1362.2755.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=978bp|location=Sequence derived from alignment at L-elsbetiae_contig1362:14053..21750+ (Laminarionema elsbetiae ELsaHSoW15)back to top |