mRNA_L-elsbetiae_contig136.2742.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig136.2742.1
Unique NamemRNA_L-elsbetiae_contig136.2742.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: D8LFG9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFG9_ECTSI)

HSP 1 Score: 580 bits (1494), Expect = 1.860e-206
Identity = 303/370 (81.89%), Postives = 326/370 (88.11%), Query Frame = 1 
Query:    7 MWSTLPA-VVRPASNKGRVGRLLPVIIFRSFFPDLSGVMPTGNRRTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKVKENACLRHAGCGSGEGREGGGGGDVQDHGLTATQFQAACADLAREEDFGEFKKLADNEGLSSAVFSSLKFLMRRRLSRGLTSLRGPAGEEAKACLAIKTNGVPEGAMLEFAISVYMMVQASPEDRALYIFSILDTNGNKQLDRLELQAALLLYMKSLARVIPTVVAHELKDMGELVDIDSNQVQEEIVSVVDELMHEVTADIPRAVEQIFEELGVIEAGCISEDEWEGAWENFPELLDMMSLRGLGKTAHWAVIVLDQVVANQRGDAQG 1113
            MWS   A  VR  +   RVGRLLP I++RSFFPDLSGV+P GNRRTHRERRVVPY PEQFF VVADVD+YK FVPFCVDSRVVKVID+ TMEA+MSVGFKV  +ACLRHAG G G G E        D GLTA QFQAACADLA+E+DF EFKKLADN+GLSSAV+SSLK+LMRRRL RGLTSL+G AGEEAKACLA++T GVPEGA+LEFAISVYMMVQAS EDRALYIFSILDTNGNKQLDR ELQAALLLYMKSLARVIPTVVAHEL+DMG L+DIDS QVQEEIVSVVDELMHEVTA+IPRAVEQIFEELGVIEAGCISEDEWEGAW+NFPELLDMMSLRGLGKTAHWA IVLDQVVANQ+ +  G
Sbjct:    1 MWSKHVARPVRRGAGLHRVGRLLPAILYRSFFPDLSGVIPNGNRRTHRERRVVPYLPEQFFGVVADVDNYKNFVPFCVDSRVVKVIDDNTMEAEMSVGFKVVRDACLRHAGRGRGGGAE--------DDGLTAAQFQAACADLAKEDDFAEFKKLADNDGLSSAVYSSLKYLMRRRLRRGLTSLKGSAGEEAKACLAMETRGVPEGALLEFAISVYMMVQASAEDRALYIFSILDTNGNKQLDRQELQAALLLYMKSLARVIPTVVAHELEDMGRLIDIDSEQVQEEIVSVVDELMHEVTAEIPRAVEQIFEELGVIEAGCISEDEWEGAWQNFPELLDMMSLRGLGKTAHWAAIVLDQVVANQQREGDG 362
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A6H5KIH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIH8_9PHAE)

HSP 1 Score: 528 bits (1360), Expect = 4.110e-184
Identity = 305/497 (61.37%), Postives = 326/497 (65.59%), Query Frame = 1 
Query:    7 MWSTLPA-VVRPASNKGRVGRLLPVIIFRSFFPDLSGVMPTGNRRTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFK-------------------------------------------------------------------------------------------------------------------------------VKENACLRHAGCGSGEGREGGGGGDVQDHGLTATQFQAACADLAREEDFGEFKKLADNEGLSSAVFSSLKFLMRRRLSRGLTSLRGPAGEEAKACLAIKTNGVPEGAMLEFAISVYMMVQASPEDRALYIFSILDTNGNKQLDRLELQAALLLYMKSLARVIPTVVAHELKDMGELVDIDSNQVQEEIVSVVDELMHEVTADIPRAVEQIFEELGVIEAGCISEDEWEGAWENFPELLDMMSLRGLGKTAHWAVIVLDQVVANQRGDAQG 1113
            MWST  A  VR  +   RVGRLLP I+ RSFFPDLSGV+  GNRRTHRERRVVPY PEQF+ VVADVD+YK FVPFCVDSRVVKVIDE TMEA+MSVGFK                                                                                                                               V  +ACLRHAG G G G EGGG        LTA QFQAACADLA+E+DF EFKKLADN+GLSSAV+SSLK+LMRRRL RGLTSL+G AGEEAKACLAIKT GVPEGA+LEFAISVYMMVQAS EDRALYIFSILDTNGNKQLDR ELQAALLLYMKSLARVIPTVVAHEL+DMG L+DIDS QVQEEIVSVVDELMHEVTA+IPRAVEQIFEELGVIEAGCISEDEWEGAW+NFPELLDMMSLRGLGKTAHWA IVLD+VVANQ+ +  G
Sbjct:    1 MWSTNAARPVRRGAGLHRVGRLLPAIVCRSFFPDLSGVITNGNRRTHRERRVVPYLPEQFYGVVADVDNYKNFVPFCVDSRVVKVIDENTMEAEMSVGFKLFTEKYTSRVVTKPPSEVAVKAMHSRLFSSLDSTWRFRPGTAPNTTVIDFSVEFEVKNLLAAQAMDMFFDEVKAFERRCRHLYGTSPSAKRKRAAQEAAAQAAGISNPCGGFLFQVKDALAVETHVKVVRDACLRHAGRGRGGGAEGGG--------LTAAQFQAACADLAKEDDFAEFKKLADNDGLSSAVYSSLKYLMRRRLRRGLTSLKGSAGEEAKACLAIKTRGVPEGALLEFAISVYMMVQASAEDRALYIFSILDTNGNKQLDRQELQAALLLYMKSLARVIPTVVAHELEDMGRLIDIDSEQVQEEIVSVVDELMHEVTAEIPRAVEQIFEELGVIEAGCISEDEWEGAWQNFPELLDMMSLRGLGKTAHWAAIVLDEVVANQQREGDG 489
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A0W8D9X4_PHYNI (EF-hand domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D9X4_PHYNI)

HSP 1 Score: 130 bits (328), Expect = 3.620e-31
Identity = 97/337 (28.78%), Postives = 167/337 (49.55%), Query Frame = 1 
Query:  136 RTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKVKENA------CLRHAGCGSGEGREGGGGGDV------QDHGLTATQFQAACADLAREED-FGEFKKLADNEGLSSAVFSSLKFLMRRRLSRGLTSLRGPAGEEAKACLAIKTNGVPEG--AMLEFAISVYMMVQASPEDRALYIFSILDTNGNKQLDRLELQAALLLYMKSLARVIPTVVAHELKDMGELVDIDSNQVQE----------EIVSVVDELMHEVTADIPRAVEQIFEELGVIEAGCISEDEWEGAWENFPELLDMMSLRGLGKTAHWAVIV 1071
            ++H E RVVP+S  + FDVVADV  Y +F+PFCV+SRV++  +E  MEA + VGFK+   +       +R                D+      +D  L    F AAC  L+ E D + + K ++++  L+ AVFSS +                             T+  P+   ++ EF + VY+M + + E +A  +F I++  G+ ++ R EL  A+   ++++ ++ P ++  +++     + + + QV+E            V  ++ELM EV  +IP AV QIF E  + +   I E EW  AW+  PE ++++++ G+ K A WA +V
Sbjct:   38 KSHTETRVVPFSCAEMFDVVADVQRYSEFLPFCVESRVLRRPNENVMEAALRVGFKLFTESYTSRVLMIRDLA-------------DIFTDYADKDGKLYYGGFTAACLALSEEYDEYEDMKDISESAALAGAVFSSFE-----------------------------THTTPKDWLSLDEFVVGVYLMTKGTFEQKAHSLFEIVNKTGDGKITREELTQAMQRRIRAVKKLFPKLLRDQVQ-----IQMANEQVEELSSVQDAAMASSVQAIEELMEEVEKEIPLAVNQIFREADLDQDDYICEQEWMFAWQAHPEFVELLTIDGMKKMAQWASVV 327
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A3F2S237_9STRA (EF-hand domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S237_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.990e-21
Identity = 93/372 (25.00%), Postives = 167/372 (44.89%), Query Frame = 1 
Query:  136 RTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKVKENA----------------------------------CLRHAGCGSGEGREGGGGGDVQDHGLT--------ATQFQAACADLAREEDFGEFKKLADNEGLSSAVFSSLKFLMRRRLSRGLTSLRGPAGEEAK-----ACLA------IKTNGVPEG--AMLEFAISVYMMVQASPEDRALYIFSILDTNGNKQLDRLELQAALLLYMKSLARVIPTVVAHELK-----DMGELVDIDSNQVQEEIVSVVDELMHEVTADIPRAVEQIFEELGVIEAGCISEDEWEGAWENFPELLDMMSLRGLGKTAHWAVIV 1071
            ++H+E RVVP++  + FDVVADVD Y++F+PFCV+SRV++  ++  MEA + VGF +   +                                  C +   C               D  +T        A   Q    D+A         +L    G +  ++ S    + +   + +   +G   E+ K     A LA       +T+  P+   +M EF + VY+M + + E +AL +F I+++ G+ ++ R EL  A+   + ++ ++ P ++  +++     +  E +    +      V  ++ LM EV  +IP AV QIF E  + +   I E EW  AW+  PE ++++++ G+ K A WA +V
Sbjct:   40 KSHKETRVVPFTCSEMFDVVADVDRYREFLPFCVESRVLQRPNDNVMEAALRVGFNIFTESYTSRVLMIRPNKIVTKAIDSPTFKRIESEWIFKPCSKPGSC-------------EIDFKVTFEVSSILHANAIQLFFDDVA-------LSQLNAFIGRARKLYESTPRPVSKAPKQPVPVTQGEEYEDLKDISESAALAGAVFSSFETSATPKEWLSMDEFVVGVYLMTKGTFEQKALSLFEIVNSTGDGKITREELTCAMQRRICAVKKLFPKLLHDQVQIQMANEQVEALSSSQDAAVARGVQAIEGLMEEVEKEIPLAVNQIFREADLDQDDYIREQEWLFAWQAHPEFVELLTIDGMKKMAQWASVV 391
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A485LQK2_9STRA (Aste57867_24214 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQK2_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 1.440e-15
Identity = 114/492 (23.17%), Postives = 186/492 (37.80%), Query Frame = 1 
Query:   31 VRPASNKGRVGRLLPVIIFRSFFPDLSGVMPTGNRRTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGF-------------------------------------------------------------------------------------------KVKENACLRHA-------------------GCGSGEGRE------------------------GGGGGDVQDHGLTATQFQAACADLAREEDF-------GEFKKLAD--NEGLSSAVFSSLKFLMRRRLSRGLTSLRGPAGEEAKACLAIKTNGVPEGAMLEFAI----SVYMMVQASPEDRALYIFSILDTNGNKQLDRLELQAALLLYMKSLARVIPTVVAHELK-DMGE-LVDIDSNQVQEEIVSV----VDELMHEVTADIPRAVEQIFEELGVIEAGCISEDEWEGAWENFPELLDMMSLRGLGK 1047
            +R A    R G ++P    R+F      +  +  R+ H+E+RVVP+S +  +DVVA+VD Y  F+PFCV SRV++    G MEAD++VGF                                                                                           KV+ NA ++ A                   G  S  GR                         G  GG  Q   L    F AAC DL    ++       G+ +K++   N  L+SAVF+S               +      +    L+ +          EFA+     +YM +  SP+++A+Y+F I+D+ G+  L   E++ AL   ++ +  + P ++  +L+  +G+     +  ++ EE + V    ++ LM +V  DIP AV Q+F    +     IS DEW G W+  PEL+++M++ G+ K
Sbjct:    1 MRVAVFARRQGTIMPRPARRTFLTVPKFMESSSLRKEHKEKRVVPFSCQDMYDVVANVDGYVSFLPFCVSSRVIRRPSAGVMEADLTVGFQIFTETYRSRVLLDAPRRILITSIESPTFKSIERSVCRLFLRGLTTIVCSSSEWAFRELSPTSCEVNFRVAFEVSSILHSHALRLFFDDVAKVQLNAFIKQATKLQLSRPAKTTSEFALLDGATSPCGRAALESKVPPSALAHLEAIFATHAQVGRDGGASQ---LYLNGFGAACTDLLDTSEWAQTSTNLGDLRKISGEHNSALASAVFASY-------------IVHDDKAGQTSDWLSFE----------EFAVRARMGLYMTLFGSPDEKAVYLFQIVDSTGDGVLSPDEVRRALERRIRVVKDIFPMLLQEQLEYHLGDDATTAEQARLNEECMKVGLMAIESLMAQVETDIPLAVNQVFLSTPLSTPNRISLDEWRGLWQGHPELVELMTIDGMKK 466
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A8K1FBG8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBG8_PYTOL)

HSP 1 Score: 79.3 bits (194), Expect = 1.610e-12
Identity = 38/72 (52.78%), Postives = 53/72 (73.61%), Query Frame = 1 
Query:   91 SFFPDLSGVMPTGNRRTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKV 306
            SFF   S V P    ++H+E ++VP+SPE+ +DVVADVD Y +F+PFCVDS+V++  +E  MEA + VGFKV
Sbjct:   17 SFF---SFVNPQSLVKSHQESKIVPFSPEEMYDVVADVDQYHEFLPFCVDSKVLRRPNENVMEAALRVGFKV 85
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A2D4BX41_PYTIN (EF-hand domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX41_PYTIN)

HSP 1 Score: 79.3 bits (194), Expect = 2.460e-12
Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 1 
Query:   64 RLLPVIIFRSFFPDLSGVM--PTGNRRTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKV 306
            RL P  + R  F   +  +  P    ++HRE +VVP+SPE+ +DVVADVD Y +F+PFCVDSRV++  ++  MEA + +GFKV
Sbjct:   36 RLPPAALSRRAFFAFANPLSNPDALIKSHRETKVVPFSPEEMYDVVADVDKYHEFLPFCVDSRVLRRPNDNVMEAVLRIGFKV 118
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BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A6G0XM93_9STRA (EF-hand domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XM93_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 3.630e-12
Identity = 35/73 (47.95%), Postives = 52/73 (71.23%), Query Frame = 1 
Query:   88 RSFFPDLSGVMPTGNRRTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKV 306
            R F      + P+  R+ HRE++VVP+S ++ FDVVA+VD+Y  F+PFCV SRVV+    G MEAD+++GF++
Sbjct:   17 RGFLSMPEFMQPSNLRKVHREKKVVPFSCQEMFDVVANVDAYTDFLPFCVASRVVRRPAAGVMEADLTIGFQI 89
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: K3WIA0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIA0_GLOUD)

HSP 1 Score: 77.8 bits (190), Expect = 5.580e-12
Identity = 32/57 (56.14%), Postives = 47/57 (82.46%), Query Frame = 1 
Query:  136 RTHRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKV 306
            ++H+E +VVP+SPE+ +DVVADVD Y +F+PFCV+SRV++  +E  MEA + +GFKV
Sbjct:   52 KSHKETKVVPFSPEEMYDVVADVDKYHEFLPFCVESRVLRQPNENVMEAALKIGFKV 108
[Close]
BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Match: A0A5J6ML23_9PROT (Ubiquinone-binding protein n=1 Tax=Hypericibacter terrae TaxID=2602015 RepID=A0A5J6ML23_9PROT)

HSP 1 Score: 73.2 bits (178), Expect = 5.580e-12
Identity = 30/56 (53.57%), Postives = 45/56 (80.36%), Query Frame = 1 
Query:  139 THRERRVVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKV 306
            TH E+RV+PYS  Q FD+VAD++ Y +F+P+CV +R+ K + +GTMEAD+ +GFK+
Sbjct:    3 THAEQRVLPYSQAQLFDLVADIERYPEFLPWCVGARIRKRLPDGTMEADLVIGFKM 58
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig136.2742.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFG9_ECTSI1.860e-20681.89EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KIH8_9PHAE4.110e-18461.37EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0W8D9X4_PHYNI3.620e-3128.78EF-hand domain-containing protein n=1 Tax=Phytopht... [more]
A0A3F2S237_9STRA1.990e-2125.00EF-hand domain-containing protein n=3 Tax=Phytopht... [more]
A0A485LQK2_9STRA1.440e-1523.17Aste57867_24214 protein n=1 Tax=Aphanomyces stella... [more]
A0A8K1FBG8_PYTOL1.610e-1252.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BX41_PYTIN2.460e-1246.99EF-hand domain-containing protein n=1 Tax=Pythium ... [more]
A0A6G0XM93_9STRA3.630e-1247.95EF-hand domain-containing protein n=1 Tax=Aphanomy... [more]
K3WIA0_GLOUD5.580e-1256.14Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5J6ML23_9PROT5.580e-1253.57Ubiquinone-binding protein n=1 Tax=Hypericibacter ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig136contigL-elsbetiae_contig136:48626..54965 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score578.9
Seed ortholog evalue1.6e-162
Seed eggNOG ortholog2880.D8LFG9
Preferred namecoq10
KEGG koko:K18588
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006091,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0015980,GO:0016020,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.ubiquinone binding
EggNOG OGsCOG2867@1,KOG3177@2759
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-04_002220.1
Exons6
Model size1113
Cds size1107
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.2514331-UTR-L-elsbetiae_contig136:48625..486311622815527.2514331-UTR-L-elsbetiae_contig136:48625..48631Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig136 48626..48631 +
1691682941.3067267-UTR-L-elsbetiae_contig136:48625..486311691682941.3067267-UTR-L-elsbetiae_contig136:48625..48631Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig136 48626..48631 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815527.2652323-CDS-L-elsbetiae_contig136:48631..487351622815527.2652323-CDS-L-elsbetiae_contig136:48631..48735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 48632..48735 +
1691682941.3171237-CDS-L-elsbetiae_contig136:48631..487351691682941.3171237-CDS-L-elsbetiae_contig136:48631..48735Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 48632..48735 +
1622815527.2767773-CDS-L-elsbetiae_contig136:49306..495091622815527.2767773-CDS-L-elsbetiae_contig136:49306..49509Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 49307..49509 +
1691682941.3253908-CDS-L-elsbetiae_contig136:49306..495091691682941.3253908-CDS-L-elsbetiae_contig136:49306..49509Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 49307..49509 +
1622815527.2894194-CDS-L-elsbetiae_contig136:52679..528721622815527.2894194-CDS-L-elsbetiae_contig136:52679..52872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 52680..52872 +
1691682941.3337352-CDS-L-elsbetiae_contig136:52679..528721691682941.3337352-CDS-L-elsbetiae_contig136:52679..52872Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 52680..52872 +
1622815527.2994597-CDS-L-elsbetiae_contig136:53339..535591622815527.2994597-CDS-L-elsbetiae_contig136:53339..53559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 53340..53559 +
1691682941.3440912-CDS-L-elsbetiae_contig136:53339..535591691682941.3440912-CDS-L-elsbetiae_contig136:53339..53559Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 53340..53559 +
1622815527.3110156-CDS-L-elsbetiae_contig136:54053..542121622815527.3110156-CDS-L-elsbetiae_contig136:54053..54212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 54054..54212 +
1691682941.3522089-CDS-L-elsbetiae_contig136:54053..542121691682941.3522089-CDS-L-elsbetiae_contig136:54053..54212Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 54054..54212 +
1622815527.3223557-CDS-L-elsbetiae_contig136:54737..549651622815527.3223557-CDS-L-elsbetiae_contig136:54737..54965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 54738..54965 +
1691682941.361123-CDS-L-elsbetiae_contig136:54737..549651691682941.361123-CDS-L-elsbetiae_contig136:54737..54965Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig136 54738..54965 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig136.2742.1prot_L-elsbetiae_contig136.2742.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig136 48632..54965 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig136.2742.1

>prot_L-elsbetiae_contig136.2742.1 ID=prot_L-elsbetiae_contig136.2742.1|Name=mRNA_L-elsbetiae_contig136.2742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=369bp
MWSTLPAVVRPASNKGRVGRLLPVIIFRSFFPDLSGVMPTGNRRTHRERR
VVPYSPEQFFDVVADVDSYKKFVPFCVDSRVVKVIDEGTMEADMSVGFKV
KENACLRHAGCGSGEGREGGGGGDVQDHGLTATQFQAACADLAREEDFGE
FKKLADNEGLSSAVFSSLKFLMRRRLSRGLTSLRGPAGEEAKACLAIKTN
GVPEGAMLEFAISVYMMVQASPEDRALYIFSILDTNGNKQLDRLELQAAL
LLYMKSLARVIPTVVAHELKDMGELVDIDSNQVQEEIVSVVDELMHEVTA
DIPRAVEQIFEELGVIEAGCISEDEWEGAWENFPELLDMMSLRGLGKTAH
WAVIVLDQVVANQRGDAQG
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mRNA from alignment at L-elsbetiae_contig136:48626..54965+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig136.2742.1 ID=mRNA_L-elsbetiae_contig136.2742.1|Name=mRNA_L-elsbetiae_contig136.2742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6340bp|location=Sequence derived from alignment at L-elsbetiae_contig136:48626..54965+ (Laminarionema elsbetiae ELsaHSoW15)
GAGATAATGTGGTCTACGTTACCAGCAGTAGTAAGACCCGCAAGCAATAA
AGGTCGGGTGGGGCGGCTTCTCCCGGTCATCATTTTTCGATCGTTCTTCC
CTGACTTGAGGTGGGTGACGCATTCGGAGCCCTTGCGCGTGCAATTGACG
TACATACAACACACACCGAGAGTAGTACTCTGTACTTCTTTTTCAACGCT
TTCTCCCTGCGCGTTCTGTTCGCTGCGTTAATTGAGGAGTGGTTCGGTAG
GACCGCAAGCGATTTCGTCCCAGGTTCTTGTATACAAGTGCCCCGCTGCA
TACAGGGGCCTGGGCCTGTTTGGATACGAATACTTAAGAGAGAGAACTAC
CAGTGCACCCTGTAAATGTAAATGACAGTGTATGTGAGTGTTTATTTCGC
ATTGTACATACATATAAGAAGGTTGATGGAGGTGGGAGCTACCGCGCTAC
CGCCGTACATAGATAGATACACATGCCGCATTTTTCATTTTTCGAAACAT
GAACTAATTGTCTCGGCGTGATCTTTCCGCGTAGGTCTACATTACATGTT
CTGTTGTATTGTAGCAGGTATCCCTCGGATACTTGTATTTGGTGTTGTGC
CTTCGCGCTTCTGCTCTAATCCCCTTCTCCGTGGTGCTGCGGCTCAACTC
AAACTTCAAACACGGCCTTCGGCACGACCAGCGGGGTGATGCCCACCGGC
AATCGGCGAACGCACCGTGAGAGACGAGTAGTGCCATACTCGCCCGAGCA
ATTTTTCGATGTGGTCGCGGACGTTGACAGCTACAAGAAGTTCGTTCCGT
TCTGCGTGGACTCTCGCGTCGTCAAGGTCATCGACGAGGGAACTATGGAG
GCAGACATGAGCGTGGGCTTCAAGGTGAAAGAAAGTGCACACCGCAAGAA
TGGCGCCAAAGACGGGGGGTAAAGAACAAAGTCCGTTCTGTGTTGTAGTA
CAAAAGCTGCTAGAAATCCTGTTGCGATGACACTGAGCAAAGCGCCCCAC
TGGCAACCGCTGTAAGCGAGAAGTCAGGCAGCCCTAGGGGAGAGCAAGGT
GGCACTACTGCTGTTGTACTCTCTCCCGTGGTTTTTTTACGTGACTCCAT
ACTCCAGGAGTGTCCCGTCTCTAGTCGTATTTGAGTGTCTCACTCCCTTT
CCTTCCGTTTGCCGTTGCTCCGCATTGCTGTCGTTGCTCCGCATTGTCTC
CCTTTCCTTTCCTTTCCTTCTCTTTCAGTTGTTCACCGAGCAGTACACCT
CTCGAGTGGTGATGCGGCGGCCGAAGGAAGTGGCCGTGAAGGCGGTAAAC
TCAAGGCTCTTCTCCTCGCTCGACAGCACGTGGCGGTTTCGTCCAGGGAA
CTCCCCCAACACCACCCTGATCGACTTTTCGGTCGAGTTTGAGGTGAAGA
ACCTCTTGGCGGCGCAGGCGATGGACGTCTTTTTTGACGAGGTAGCGTTG
CAGCAGGTGAGAGACGGAGGGAGAAAGAGCGAGCGAAAGAGAGAGTGTCG
TTTCTTGTGGAACTTTTTAATCAGGGTTTCGATAAGAACTCTAAGGCTTT
CGGATGGGATCGGCGCAGAGCAGCGCTGACCTTGGCGGTATGTAGGAGGC
AACAAGCAGTGCGCAGTCATTTTGGTGGAATCTTGCTTGAAGTATTCTCG
AATGCCCTGCCAATCGATTTGTCCTCTTGGCTAGTCTGTGCTCTTCACCA
TCCATATTTGTTTGCTCGAAAGGAGATGTGCACCTGCGAATCTTGAAAAC
GGGCACTCAAAAGTTCACCATCCATATTTGTTTGCTCGAAAGGAGATGTG
CACCTGCGAATCTTGAAAACGGGCACTCGAAAGTTCAAATAGACAGATAG
ACGTCTTGGCGTCCGGTCGAGTCTTGAGCGGAGTGCTGCATAAAAGAGGG
TCAAGAGCGTCCAGGCGTGTGCATGGGGTTCGACGAGGTGCCTTCGCAAG
GGTGTGTGTGTAACCCAGTTTCAACACTGGTGTGCCGTTAAAACTATGGA
AGCAAGCACGCGCCCTAATCTATCTCCGTGCACGGGTTTCCTTGTGTGAG
AATATATATATATATTGTATATATAAACAAGATCCCCCTTCGGAGCGAGC
TCATGAGAGCACAGCGGCAGGGGGTGATGCAAGACCAAAGCAAACAGGCG
AAGGCATCAGCAGAAGTACTCCTAAATTTACAACTGAAAAATACAGCATC
TGCTGGCTGTGCAACTGCTTGTTCTTTTCTGTGCTGCCGCTCCCTTGAAC
CAAACAGAGCTGTGCCGATCTGTGCTCACCAGGAACAAAAGCTGTCCAGT
CTACTGGCATGTGCTGCCATGCTCAAAACATCTGCTGTCTTACTGGCGTG
TTTTTGGACTAGTGGAGGCCGATAGCCTACTGATTCAGATTTCGGAACAG
AAGTTCCCAGAGACCAATATATAGTGTGTGTTTTTTTTAATTAATTAATT
AATTATTTGGTTTTGGGCAGGCAATATGGAGGGAATTGTAATTAATTCGG
GGGATTACCGTCGCTGTTCACCGCTTGCTGCACGGAAAAAACGGCATGTT
AATCGCCAGCAAGGATGATCGAACTCCAGTCGGGCAAACGAAAGAGTTGA
TAGTTATCCCCTACACCACGCGCACGTAGCGTGAAAAACTCTCTTCTAAT
ACCAAAAAAAGACAGAAATCCCTGCATCCAGGCCCCATATAGCAGTGCAG
CCCGGCGGGTGCGTACTGGCATTTTTTGTGACCTGCGCTGAGGAACATTT
CGATCTGGGTTCCTCTCACTTGCCAACCATGGTTTCCAACAGTTGCACGC
AGAGCCAAATTTAATGAATCCATACAAATCCAAGTCAATAAGCATTTTCC
GACTTTGAGGCCGTTTCTTACGGGTGATAGTTTTATCAGCCAGGTCTGCT
CCAGCTTATATTTTGGCCGAATATATCACTGGGCGACTGGATTCCTAGGA
ATATTTCCCCATCTCATAATTTCTGAGCTGATATTTGCCCAAATTATTAC
CCGTAAGAAGCCTCCGTTTTTTATTTCCAGTCAAATGTACCCCCCCCCCC
CAAATAAAACCTGGAAATTATCAACCGTATGAATCGGCCTGAGGAGACGA
TATATATAGGGTGTTTTTGTTTTTAATTAATTATTTGGTTTTGGGCAGGC
AATATGGAGGGTATTGTAATTAATTCGGGGGAGTGCCGTCGCTCGTCTCC
GCTTGCACGGAAAAAACGGCATGTAAGGAGCTAACAAGGATATTCGAACT
CCAGTCGGGCAAACGAAAGAGTTCATAGTTATCCCCTATACCACGCGCAC
TTCGTTACAGAGTAGCGTGAAAAACTCTCTTCTAGTACCAAAAAAGACAG
AAATCCCTGCATCCAGGCCCCATATAGCAGTGCAGCCCGGCGGGTGCGTA
CTGGCATTTTCTGTAACCTGCGCTGAGGAACATTTCGATCTGGGTTCCTC
TCACTTGCCAACCATGGTTTCCCGGTTTCCAGCAGTTGCACGCGGAGCCA
AATTTAATTAATCCATACAAATCCAAGTCAATAAGCATTTTCCGACTGTT
AGGAGACGATATTGTCTACGTATCTATATGTATGCATATGCCACGCTGCA
TGTTGCATGTTGCACGTTGCACACCACAGGTGAAAGCGTTTGAGCGCCGG
TGTCGGCATTTATACGGGGCGTCTCCGGTAGCAAAAAGGAAGAGGGCCTC
CGAGGAAGCGGCTGCGCAGGCGGCCGGAGTGTCGTACCCTTGCGGAGGCT
TTCTCTTCCCAGGTGTGTTTTATGTTGAGAAATTGTTGCACCCAACAGCA
GTGGCCGGTTTTTAGCGCTTCTTGGTACATAGCTCTTTTCCCGGCGGAAG
CTTCCTCCCCCTAGCGGGACGATACGTACCCACTCACATCATACCAAATC
CGCACGCCAACCAGTCACCGACGGCTTGTGTCACCGCGTCCGTTCTCCCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGGTTCAACT
GCTTTCCAGTCAAGGACGCCTTGGCCGTAGAAACCCACGTTAACGTTGTG
CGAGATGCATGTCTACGGCACGCGGGCTGCGGTAGCGGGGAAGGGCGGGA
GGGTGGTGGGGGTGGTGATGTGCAGGACCACGGCCTGACGGCGACTCAGT
TCCAAGCGGCGTGCGCGGACCTAGCGAGGGAGGAGGACTTTGGGGAGTTT
AAAAAGCTGGCCGACAACGAGGGTCTTTCGTCGGCGGTCTTTTCCAGGTT
GTTTGTGTACGTAATTGGGTGTGCCCGTAATTAGCATCAACTCAACTCGC
TTTTTGCTCTCCGCGCCTCTTTACATACCGCCAACATGCACCCGTCCAAC
CCGACGTGAGCACCGCGTTGGCAAATTGCCCACAAAACAAACAAACGAAC
CCCGGACGCGGCGTGCTTGGCCGGATGTTGTCACCACCAGCCTGTCCCCA
CATTACATTAATGTACATTACGTTGTGAGAGATCAGCTCTATCCCGAAAT
CACCCATTGCTACTGGTTCCTGCTACTGGTTCCAGTTGAATCAATTACAA
AACATGCACTCCGTATACGATGTACATCTATACCGTACCTAACTGCGTAG
CCGCCGCCACACAGCCTCGCCCGCGCTACATACGCCCCCTTCACCGTACC
CAGTCAAGGTTACGTCCGATTAAACGCGACCTCTGCACACCCCCAAAAAC
ACAAAAATGAACAGTTTGAAGTTCCTCATGCGACGGCGCTTGAGCCGCGG
CCTCACTAGCCTGAGGGGCCCGGCGGGAGAAGAGGCCAAGGCGTGCCTGG
CGATCAAGACCAACGGTGTACCCGAGGGAGCGATGCTGGAGTTTGCGATC
TCGGTGTACATGATGGTGCAGGCCTCTCCGGAAGACCGAGCGCTGTACAT
CTTCTCTATCCTGGACACCAATGGCAACAAGCAGGTCAGTGAACCACCCT
CCCTCGACGAAGCGATATTGGCCATGCCTCTCACTATCGATAGCAGCGGT
AACTGTAAATAATGCCATAATTTTGTTTTGTGCGTAATTTGCACCGGGTG
TGGATTCATCGTTTATATCTTGAGCGCTTTACACAAGTGTTGTCTTGAAT
TGTGTGTAGGAGCCTGACGGTGTTCATGTCTTTGTGGTTCACCGCATATA
ACTCTGCTATATTTTACAGGTGAGATGGGTCAATAGTAGCTGTACGTACT
CGCGTATGAACTTCAGCCTATCTTCGCGTGCGTCCGTTTATAATTGCGTA
AGCCCCCACCCACCCGCGTAGTGGTGTTTTGCAGCGTTATTGCACGTCTT
TCGTTTGCCAATTGTTGCTATTTTACTGCATGCTTCTTGTCGCCAAACGC
CTCTCACAACCATCTCGCATCGCTCGTTCGCCATGCAACCCATTCCACTC
CATTCTACTCTATTCCACTTGTGGTCAGCTGGACCGGCTGGAGCTGCAGG
CGGCCCTCCTCTTGTACATGAAGAGCCTCGCCCGTGTCATCCCCACCGTG
GTGGCGCACGAGCTGAAGGACATGGGCGAGCTGGTCGACATCGACAGCAA
CCAGGTCCAGGAGGAGATTGTCTCGGTTGTGGACGAGGTGGGTGCGTGCT
ATCGCAGGCACAAGTACGTACACTTTAGCGTGGTGGCTGTACTTCCAGGT
TCCCATTTCAGCCTCGGCACGCTTCCTCTGGACGGTTTGTTTATTCTCTC
TAGTGGCACTCGCGATGGCTTGACTGGGGGCAAGTTAGCGTAAAGCAAGG
CAGACAATTATTCAACCGAGCTTCGGAGGTCCCACCGAGCAAGAATGTCG
GTGTGGTTGCCGAGGTGCTCGACAGAGGTTTTTGAATACGCGGACTTTAC
ATCGGGTGCTCAGGCTCGCTCCTAAGGTAAGTTCATGGTGGTTTTGCACA
TTTGGAAATTTGAAATTTTGGATGAGAGTACGCACCCGGATCGGATCGTA
CATACAGCGGGCCTCCATATGACTGCATGGGGGGAGAGCGCTTGACTCTA
CCCTCTCAGCATAACGCTGACCCTGCTACCTGTCCTGCCCCTGCCGCCCC
TGCTGCTACCCCTGCATCCGAAACGACCCTCGGATAACAACGCACAACCG
CACGCGCGCCAGCTGATGCACGAGGTGACAGCGGACATTCCGCGGGCAGT
GGAGCAGATCTTCGAGGAGCTCGGCGTGATCGAGGCCGGCTGCATCTCTG
AGGACGAGTGGGAGGGGGCCTGGGAAAACTTTCCGGAGCTGCTGGACATG
ATGAGCCTGCGCGGCCTGGGCAAGACGGCGCACTGGGCCGTGATAGTTCT
TGACCAGGTAGTGGCTAACCAGCGAGGAGACGCACAAGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig136:48626..54965+

>mRNA_L-elsbetiae_contig136.2742.1 ID=mRNA_L-elsbetiae_contig136.2742.1|Name=mRNA_L-elsbetiae_contig136.2742.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2214bp|location=Sequence derived from alignment at L-elsbetiae_contig136:48626..54965+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGGTCTACGTTACCAGCAGTAGTAAGACCCGCAAGCAATAAAGGTCG
GGTGGGGCGGCTTCTCCCGGTCATCATTTTTCGATCGTTCTTCCCTGACT
TGAGATGTGGTCTACGTTACCAGCAGTAGTAAGACCCGCAAGCAATAAAG
GTCGGGTGGGGCGGCTTCTCCCGGTCATCATTTTTCGATCGTTCTTCCCT
GACTTGAGCGGGGTGATGCCCACCGGCAATCGGCGAACGCACCGTGAGAG
ACGAGTAGTGCCATACTCGCCCGAGCAATTTTTCGATGTGGTCGCGGACG
TTGACAGCTACAAGAAGTTCGTTCCGTTCTGCGTGGACTCTCGCGTCGTC
AAGGTCATCGACGAGGGAACTATGGAGGCAGACATGAGCGTGGGCTTCAA
GGTGAAAGAAACGGGGTGATGCCCACCGGCAATCGGCGAACGCACCGTGA
GAGACGAGTAGTGCCATACTCGCCCGAGCAATTTTTCGATGTGGTCGCGG
ACGTTGACAGCTACAAGAAGTTCGTTCCGTTCTGCGTGGACTCTCGCGTC
GTCAAGGTCATCGACGAGGGAACTATGGAGGCAGACATGAGCGTGGGCTT
CAAGGTGAAAGAAAATGCATGTCTACGGCACGCGGGCTGCGGTAGCGGGG
AAGGGCGGGAGGGTGGTGGGGGTGGTGATGTGCAGGACCACGGCCTGACG
GCGACTCAGTTCCAAGCGGCGTGCGCGGACCTAGCGAGGGAGGAGGACTT
TGGGGAGTTTAAAAAGCTGGCCGACAACGAGGGTCTTTCGTCGGCGGTCT
TTTCCAGATGCATGTCTACGGCACGCGGGCTGCGGTAGCGGGGAAGGGCG
GGAGGGTGGTGGGGGTGGTGATGTGCAGGACCACGGCCTGACGGCGACTC
AGTTCCAAGCGGCGTGCGCGGACCTAGCGAGGGAGGAGGACTTTGGGGAG
TTTAAAAAGCTGGCCGACAACGAGGGTCTTTCGTCGGCGGTCTTTTCCAG
TTTGAAGTTCCTCATGCGACGGCGCTTGAGCCGCGGCCTCACTAGCCTGA
GGGGCCCGGCGGGAGAAGAGGCCAAGGCGTGCCTGGCGATCAAGACCAAC
GGTGTACCCGAGGGAGCGATGCTGGAGTTTGCGATCTCGGTGTACATGAT
GGTGCAGGCCTCTCCGGAAGACCGAGCGCTGTACATCTTCTCTATCCTGG
ACACCAATGGCAACAAGCAGTTTGAAGTTCCTCATGCGACGGCGCTTGAG
CCGCGGCCTCACTAGCCTGAGGGGCCCGGCGGGAGAAGAGGCCAAGGCGT
GCCTGGCGATCAAGACCAACGGTGTACCCGAGGGAGCGATGCTGGAGTTT
GCGATCTCGGTGTACATGATGGTGCAGGCCTCTCCGGAAGACCGAGCGCT
GTACATCTTCTCTATCCTGGACACCAATGGCAACAAGCAGCTGGACCGGC
TGGAGCTGCAGGCGGCCCTCCTCTTGTACATGAAGAGCCTCGCCCGTGTC
ATCCCCACCGTGGTGGCGCACGAGCTGAAGGACATGGGCGAGCTGGTCGA
CATCGACAGCAACCAGGTCCAGGAGGAGATTGTCTCGGTTGTGGACGAGC
TGGACCGGCTGGAGCTGCAGGCGGCCCTCCTCTTGTACATGAAGAGCCTC
GCCCGTGTCATCCCCACCGTGGTGGCGCACGAGCTGAAGGACATGGGCGA
GCTGGTCGACATCGACAGCAACCAGGTCCAGGAGGAGATTGTCTCGGTTG
TGGACGAGCTGATGCACGAGGTGACAGCGGACATTCCGCGGGCAGTGGAG
CAGATCTTCGAGGAGCTCGGCGTGATCGAGGCCGGCTGCATCTCTGAGGA
CGAGTGGGAGGGGGCCTGGGAAAACTTTCCGGAGCTGCTGGACATGATGA
GCCTGCGCGGCCTGGGCAAGACGGCGCACTGGGCCGTGATAGTTCTTGAC
CAGGTAGTGGCTAACCAGCGAGGAGACGCACAAGGGCTGATGCACGAGGT
GACAGCGGACATTCCGCGGGCAGTGGAGCAGATCTTCGAGGAGCTCGGCG
TGATCGAGGCCGGCTGCATCTCTGAGGACGAGTGGGAGGGGGCCTGGGAA
AACTTTCCGGAGCTGCTGGACATGATGAGCCTGCGCGGCCTGGGCAAGAC
GGCGCACTGGGCCGTGATAGTTCTTGACCAGGTAGTGGCTAACCAGCGAG
GAGACGCACAAGGG
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