|
Homology
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: D8LDX3_ECTSI (Exocyst subunit Exo70 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDX3_ECTSI) HSP 1 Score: 510 bits (1313), Expect = 2.560e-172 Identity = 264/312 (84.62%), Postives = 286/312 (91.67%), Query Frame = 1
Query: 4 GDRGSRGSKHSTGPEGGRTAAANSCPRFTALVNHLIKTLFVNLTEKSASYPTATLPGAALRDLFILNNTEYVLANARTPFAGLTLNTPGTAPSPTPAEEFRSIFGEAPSAASASDGARSPRGGGVRPKSPRRWGFGGSKSKDAVTRAAAARSAAEGLVGPDAGDDELQGLSIADFMTDNMSSLLKRLVHEKKTGYMETLLTPLVAAAKDDVGELKYQRGKLLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFSG 939
GDR SRGSK+S E G T+A+N+CPRFT LVNHLIKTLFVNLTEKS SYPTATLPGAALR+LF+LNN EYVLANA+ PF+GL LN+PGTAPSP+PAEEFRSIFGEAPS SA+DGARSPRGGGV+P+SPR+WGFGG KSKDAV RAAAARS AEGLVGPDAGDDELQGLSIADFMT++MSSLLKRLV EKKTGYM+TL+ PL AAKDDVGELKYQRGKLLTLDCGR+LKAKFTAFNESWEEVYHSQL VSVVDP RRVKLKEEAK RCLVPYRELY KY+ VQFSKKHQ+QYLKY+PDAIDQGI QLFSG
Sbjct: 521 GDRTSRGSKNSPVRERGATSASNACPRFTTLVNHLIKTLFVNLTEKSGSYPTATLPGAALRELFLLNNAEYVLANAKMPFSGLALNSPGTAPSPSPAEEFRSIFGEAPSV-SAADGARSPRGGGVKPRSPRKWGFGGFKSKDAVKRAAAARSLAEGLVGPDAGDDELQGLSIADFMTESMSSLLKRLVQEKKTGYMDTLMRPLTEAAKDDVGELKYQRGKLLTLDCGRLLKAKFTAFNESWEEVYHSQLPVSVVDPSRRVKLKEEAKARCLVPYRELYCKYQDVQFSKKHQEQYLKYSPDAIDQGIGQLFSG 831
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A835YN31_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN31_9STRA) HSP 1 Score: 178 bits (452), Expect = 2.130e-46 Identity = 129/329 (39.21%), Postives = 167/329 (50.76%), Query Frame = 1
Query: 64 AANSCPRFTALVNHLIKTLFVNLTEKSASYPTATLPGAALRDLFILNNTEYVLANARTPFAGLTLNTPGTA--PSPTPAEEFRSIFGEAPSAASASDGARSPRGGGVRPKSPR-----RWGFGGSK----SKDAVTRAAAARSAA----------EGLVGPDAGDDELQGLSIADFMTDNMSSLLKRLVHEK---------KTG------YMETLLTPLVAAAKDDVGELKYQ-RGKLLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFSG 939
AA CPRF A VNHL+ L NL EK+ +YPT A R LF+LNN Y+L NAR A + + P S A+ +IF RP SPR R G G + D ++ R+ A +GL DDE LS+A F+T L L+ EK +TG Y TL PL A DDVG L+Y RGKLL+L+CGR++K KF+ FNE+W++++ SQ ++V DP R L EEA+ R L PYR+LY Y+ V FSKKHQ +YLKY P+A+D+GI LF G
Sbjct: 444 AARQCPRFAAFVNHLVARLLENLLEKAKAYPTGRADEAR-RQLFLLNNANYLLTNARAANAPQSSSGPAGVLHSSSARADAIVTIF---------------------RPDSPRSSAHARLGSGXXXXXXXAHDVLSPRTLRRNIAVDTFFSGSHRQGL------DDEGPPLSVAHFLTSATQRTLDNLIREKASTQSAARLRTGGRGVMTYCATLFDPLAEAVADDVGALEYGGRGKLLSLECGRLIKTKFSTFNEAWDQLHTSQRGLNVSDPDIRTLLMEEARDRVLGPYRKLYDTYKDVPFSKKHQSEYLKYPPEAVDRGIEGLFQG 744
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A1E7FU14_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FU14_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.960e-17 Identity = 48/121 (39.67%), Postives = 74/121 (61.16%), Query Frame = 1
Query: 574 KKTGYMETLLTPLVAAAKDDVGELKYQRGK-LLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLF 933
K G E L T L + D EL+YQ+ +L+LD GR++K++F+ FNE +E ++ + VVDP R L++E L YR Y KY ++FSKKHQ++Y KY+P I++ ++QL+
Sbjct: 92 KYLGQWEALNTHLTSVEHD---ELEYQKNDTILSLDSGRLIKSRFSGFNEDFERIFEEHKDLCVVDPRLRDLLQKEVAGVFLPNYRRFYDKYSKIRFSKKHQNEYTKYSPYKIEELLNQLY 209
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A448ZQ03_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ03_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 2.100e-16 Identity = 48/121 (39.67%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 574 KKTGYMETLLTPLVAAAKDDVGELKYQRGK-LLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLF 933
K G E L T L D EL+YQ+ +L+LD GR++K++F+ FNE +E+++ Q +SVVDP R L++E + YR+ Y KY ++FSKKHQ++Y KY+P I + + +L+
Sbjct: 665 KYLGQWEALNTHLTIVEHD---ELEYQKNDTILSLDSGRLIKSRFSGFNEDFEQIFEEQKELSVVDPRLRDLLQKEVAGVFIPNYRKFYEKYTKIRFSKKHQNEYTKYSPQKIGELLKELY 782
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A6T6EQI4_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6EQI4_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.590e-15 Identity = 46/122 (37.70%), Postives = 73/122 (59.84%), Query Frame = 1
Query: 574 KKTGYMETLLTPLVAAAKDDVGELKYQRGK--LLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLF 933
K G+ E L T L + D EL+YQ+ +L+LD GR++K +F+ FNE +E ++ + VVDP R L++E L Y + Y KY ++FSKKHQD+Y K++P I++ + +L+
Sbjct: 167 KYLGHWEVLNTHLTSVEHD---ELEYQKKNDTILSLDSGRLIKNRFSGFNEDFERLWEDHRDLCVVDPRLRDTLQKEVAGVFLPLYSKFYDKYSQIRFSKKHQDEYTKFSPYKIEEMLDKLY 285
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A7S3V6M8_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V6M8_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 5.830e-15 Identity = 44/116 (37.93%), Postives = 71/116 (61.21%), Query Frame = 1
Query: 592 ETLLTPLVAAAKDDVGELKYQRGKLLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFSG 939
E L L ++ D+ ++ KLLTLD GR+LKA+F+ FNES+E+ Y + ++++D R +L ++ KT L Y++ Y Y QFSKK+ + YLKY P I++ ++ +FS
Sbjct: 881 EVLNEHLTLVSESDLNYSNAEQ-KLLTLDSGRLLKARFSGFNESFEKTYATHKELTIIDRNLRARLLDDVKTVFLPRYKKFYTNYSKYQFSKKNMEDYLKYPPAKIEKMMADMFSS 995
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: B7G2Z1_PHATC (Exocyst subunit Exo70 family protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2Z1_PHATC) HSP 1 Score: 84.0 bits (206), Expect = 7.300e-14 Identity = 43/124 (34.68%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 574 KKTGYMETLLTPLVAAAKDDVGELKYQRG--KLLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFSG 939
K G+ E L T L A D+ +YQ+ +L+L+ GR++K +F+ FNE +E + + V+D R++L+ + + L YR+ Y KY ++FSKKHQ++Y KY+PD I + + +L++
Sbjct: 660 KYLGHWEALNTHLTAVGTTDI---EYQKNDENVLSLESGRLIKQRFSGFNEDFERTFALHKKLCVIDNRLRLQLQGDVASLFLPRYRKFYDKYTKLRFSKKHQEEYTKYSPDTIAKMLGELYTS 780
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A7S1GNU5_CYCTE (Exocyst subunit Exo70 family protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNU5_CYCTE) HSP 1 Score: 82.4 bits (202), Expect = 1.350e-13 Identity = 42/104 (40.38%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 631 DVGELKYQRGK-LLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFSG 939
D L+YQ+ K LL+L+ GR+ K +F F E +E +Y +SV+DPG R ++ + K LV Y + Y KY +FSKK+Q +YLKY P +D I+ ++ G
Sbjct: 324 DSNGLEYQKNKNLLSLESGRLFKDRFKGFIEEFELMYAVHNRLSVIDPGLRRDMQTQVKKVFLVRYEKFYEKYSRFRFSKKNQQEYLKYPPKKVDSMINMMYGG 427
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A0P1AJX7_PLAHL (Exocyst subunit Exo70 family protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJX7_PLAHL) HSP 1 Score: 82.4 bits (202), Expect = 2.000e-13 Identity = 46/133 (34.59%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 544 SSLLKRLVHEKKTGYMETLLTPLVAAAKDDVGELKYQRG-KLLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFSG 939
++ LK +H + E L D +L+Y +G +LTL+ GR++K KF FN+ EE++ +Q +VD R + A + Y+ Y KY +QFSKKH +YLKYTP A + +LF+G
Sbjct: 467 NNALKAFIHVSYASFTEYL--------HDPKEKLQYTKGGNMLTLESGRLIKEKFLKFNDQLEELHKAQKMYVIVDVPMRQHVIRTAIDTIMPAYKPFYEKYSAIQFSKKHASRYLKYTPQAAQSLLKELFTG 591
BLAST of mRNA_L-elsbetiae_contig1359.2729.1 vs. uniprot
Match: A0A7S2UES4_9STRA (Exocyst subunit Exo70 family protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UES4_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 2.060e-13 Identity = 39/102 (38.24%), Postives = 61/102 (59.80%), Query Frame = 1
Query: 631 DVGELKYQRGKLLTLDCGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYRELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFS 936
D G+L +Q LL+LD GR++K +FT F E +E++Y+ ++ DP R L EE K + Y+ + Y + FSKK+Q+QYLKY P ++ I L++
Sbjct: 365 DKGDLSFQSANLLSLDSGRIIKGRFTGFIEDFEKIYYVHKRLTTNDPKLRQTLIEEVKEIFVPRYKTFFDTYSKINFSKKNQEQYLKYPPMRVESMIGGLYA 466
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 84.0 |
Seed ortholog evalue | 6.2e-14 |
Seed eggNOG ortholog | 112098.XP_008620451.1 |
Preferred name | EXOC7 |
KEGG ko | ko:K02865,ko:K07195 |
KEGG Pathway | ko03010,ko04910,map03010,map04910 |
KEGG Module | M00177 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000131,GO:0000145,GO:0000920,GO:0001411,GO:0001505,GO:0001927,GO:0003674,GO:0005488,GO:0005515,GO:0005543,GO:0005546,GO:0005575,GO:0005622,GO:0005623,GO:0005628,GO:0005737,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0005886,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0005938,GO:0006810,GO:0006836,GO:0006886,GO:0006887,GO:0006892,GO:0006893,GO:0006903,GO:0006904,GO:0007154,GO:0007165,GO:0007264,GO:0007265,GO:0007266,GO:0007267,GO:0007268,GO:0007269,GO:0008013,GO:0008104,GO:0008150,GO:0008289,GO:0009894,GO:0009987,GO:0010506,GO:0015031,GO:0015630,GO:0015833,GO:0016020,GO:0016043,GO:0016079,GO:0016080,GO:0016081,GO:0016192,GO:0016241,GO:0017016,GO:0017048,GO:0017049,GO:0017156,GO:0019222,GO:0019899,GO:0022406,GO:0022607,GO:0023052,GO:0023061,GO:0030424,GO:0030426,GO:0030427,GO:0031267,GO:0031323,GO:0031329,GO:0031503,GO:0032153,GO:0032584,GO:0032940,GO:0032991,GO:0033036,GO:0033267,GO:0034451,GO:0034613,GO:0034622,GO:0034629,GO:0035091,GO:0035556,GO:0042763,GO:0042764,GO:0042886,GO:0042995,GO:0043005,GO:0043167,GO:0043168,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043332,GO:0043900,GO:0043903,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044459,GO:0044463,GO:0044464,GO:0045055,GO:0045184,GO:0046903,GO:0046907,GO:0048193,GO:0048278,GO:0048489,GO:0050789,GO:0050794,GO:0050896,GO:0051020,GO:0051179,GO:0051234,GO:0051285,GO:0051286,GO:0051301,GO:0051601,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051716,GO:0065003,GO:0065007,GO:0065008,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0090522,GO:0090723,GO:0097458,GO:0097479,GO:0097480,GO:0098876,GO:0098916,GO:0099003,GO:0099022,GO:0099023,GO:0099504,GO:0099536,GO:0099537,GO:0099568,GO:0099643,GO:0099738,GO:0120025,GO:0120038,GO:0140029,GO:0140056,GO:0150034,GO:1901981,GO:1902936,GO:2000535 |
EggNOG free text desc. | exocytosis |
EggNOG OGs | KOG2344@1,KOG2344@2759 |
COG Functional cat. | S |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | br01610,ko00000,ko00001,ko00002,ko03011,ko03036,ko04131 |
Ec32 ortholog description | Exocyst complex protein Exo70 |
Ec32 ortholog | Ec-23_003470.1 |
Exons | 10 |
Model size | 1120 |
Cds size | 414 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815525.766475-UTR-L-elsbetiae_contig1359:2913..2997 | 1622815525.766475-UTR-L-elsbetiae_contig1359:2913..2997 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 2914..2997 - |
1691682940.3647506-UTR-L-elsbetiae_contig1359:2913..2997 | 1691682940.3647506-UTR-L-elsbetiae_contig1359:2913..2997 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 2914..2997 - |
1622815525.7765315-UTR-L-elsbetiae_contig1359:5037..5131 | 1622815525.7765315-UTR-L-elsbetiae_contig1359:5037..5131 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 5038..5131 - |
1691682940.3778095-UTR-L-elsbetiae_contig1359:5037..5131 | 1691682940.3778095-UTR-L-elsbetiae_contig1359:5037..5131 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 5038..5131 - |
1622815525.8955667-UTR-L-elsbetiae_contig1359:7504..7577 | 1622815525.8955667-UTR-L-elsbetiae_contig1359:7504..7577 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 7505..7577 - |
1691682940.4427466-UTR-L-elsbetiae_contig1359:7504..7577 | 1691682940.4427466-UTR-L-elsbetiae_contig1359:7504..7577 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 7505..7577 - |
1622815525.90769-UTR-L-elsbetiae_contig1359:7922..7997 | 1622815525.90769-UTR-L-elsbetiae_contig1359:7922..7997 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 7923..7997 - |
1691682940.4516912-UTR-L-elsbetiae_contig1359:7922..7997 | 1691682940.4516912-UTR-L-elsbetiae_contig1359:7922..7997 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 7923..7997 - |
1622815525.9200242-UTR-L-elsbetiae_contig1359:9439..9585 | 1622815525.9200242-UTR-L-elsbetiae_contig1359:9439..9585 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 9440..9585 - |
1691682940.460706-UTR-L-elsbetiae_contig1359:9439..9585 | 1691682940.460706-UTR-L-elsbetiae_contig1359:9439..9585 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 9440..9585 - |
1622815525.9340281-UTR-L-elsbetiae_contig1359:10655..10730 | 1622815525.9340281-UTR-L-elsbetiae_contig1359:10655..10730 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 10656..10730 - |
1691682940.4696188-UTR-L-elsbetiae_contig1359:10655..10730 | 1691682940.4696188-UTR-L-elsbetiae_contig1359:10655..10730 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 10656..10730 - |
1622815525.9434347-UTR-L-elsbetiae_contig1359:11384..11543 | 1622815525.9434347-UTR-L-elsbetiae_contig1359:11384..11543 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 11385..11543 - |
1691682940.478693-UTR-L-elsbetiae_contig1359:11384..11543 | 1691682940.478693-UTR-L-elsbetiae_contig1359:11384..11543 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig1359 11385..11543 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815525.7859166-CDS-L-elsbetiae_contig1359:5131..5246 | 1622815525.7859166-CDS-L-elsbetiae_contig1359:5131..5246 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 5132..5246 - |
1691682940.3878074-CDS-L-elsbetiae_contig1359:5131..5246 | 1691682940.3878074-CDS-L-elsbetiae_contig1359:5131..5246 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 5132..5246 - |
1622815525.8225024-CDS-L-elsbetiae_contig1359:6242..6337 | 1622815525.8225024-CDS-L-elsbetiae_contig1359:6242..6337 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 6243..6337 - |
1691682940.3979855-CDS-L-elsbetiae_contig1359:6242..6337 | 1691682940.3979855-CDS-L-elsbetiae_contig1359:6242..6337 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 6243..6337 - |
1622815525.8631828-CDS-L-elsbetiae_contig1359:6751..6836 | 1622815525.8631828-CDS-L-elsbetiae_contig1359:6751..6836 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 6752..6836 - |
1691682940.4125774-CDS-L-elsbetiae_contig1359:6751..6836 | 1691682940.4125774-CDS-L-elsbetiae_contig1359:6751..6836 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 6752..6836 - |
1622815525.873988-CDS-L-elsbetiae_contig1359:7152..7239 | 1622815525.873988-CDS-L-elsbetiae_contig1359:7152..7239 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 7153..7239 - |
1691682940.424945-CDS-L-elsbetiae_contig1359:7152..7239 | 1691682940.424945-CDS-L-elsbetiae_contig1359:7152..7239 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 7153..7239 - |
1622815525.886016-CDS-L-elsbetiae_contig1359:7472..7504 | 1622815525.886016-CDS-L-elsbetiae_contig1359:7472..7504 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 7473..7504 - |
1691682940.433999-CDS-L-elsbetiae_contig1359:7472..7504 | 1691682940.433999-CDS-L-elsbetiae_contig1359:7472..7504 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1359 7473..7504 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1359.2729.1 >prot_L-elsbetiae_contig1359.2729.1 ID=prot_L-elsbetiae_contig1359.2729.1|Name=mRNA_L-elsbetiae_contig1359.2729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=138bp
MTDNMSSLLKRLVHEKKTGYMETLLTPLVAAAKDDVGELKYQRGKLLTLD CGRVLKAKFTAFNESWEEVYHSQLSVSVVDPGRRVKLKEEAKTRCLVPYR ELYFKYEGVQFSKKHQDQYLKYTPDAIDQGISQLFSG* back to topmRNA from alignment at L-elsbetiae_contig1359:2914..11543- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1359.2729.1 ID=mRNA_L-elsbetiae_contig1359.2729.1|Name=mRNA_L-elsbetiae_contig1359.2729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8630bp|location=Sequence derived from alignment at L-elsbetiae_contig1359:2914..11543- (Laminarionema elsbetiae ELsaHSoW15) GCCGGAGACCGCGGCAGCCGAGGCTCGAAGCACAGCACCGGGCCGGAGGG
AGGGCGCACCGCCGCTGCCAACTCGTGCCCGAGGTTCACCGCCCTCGTAA
ACCACCTCATCAAGACGCTCTTCGTCAATCTTACCGAGAAGTCCGCGTCC
TACCCCACGGTGTGTATTAGACACAAACCGACGCGTAGCTGCATGCGCAT
ACTCTATTTGTGTGTCCGTTCCCAAGCAAGGTGTGGTTGTGTTTAGTATA
CATACATACCGCGGCGGATGGGTGGATGGAAGAAATGCGAGTCGATGTGC
GAGTCGAGGGCGCGGTGAGAGCATTTCTCCGTGTGCCCCGAGGCGCAGTC
GGCGTTTCGTGTCTGCTTGCTGCTTACGTGACGCTGTACCCACATACATA
TGACCCATTTGCACGCTTCAGCGCCCCCCCCCCCCCCCAAGTACCGTTCA
CCACAGTTTTATTCAATGTATACAAATGTCAGCAATCTACTTCCAGTCTG
CGAAGAAGTCGTTCCAGAGGCACTGTTTTGGGAACATGCTGAAATTAGTA
CGTTTGCAGGTACGGGACCCCGCGTGTGGGCGGGTGCTAGCGGTACGCAC
GTCCTGATTTGTCCGCGGGGACCCCTCAATTTCGTGTATATGGTTTTAAT
ATCTTGGGGGGAGCGTGCGCACCTGCTTGAAATTGCTCTGCTGCTGTTTT
TTGTCACCCCTACTTGCATCCACTTTATCTGGTCTAAATGCTGTCGCCTG
CCTGCCCTCGCTGCCTACCACCCCCCCCCCCCCGCCCCCCGCCCCCCGCC
CCCCGCCCCCCAGGCAACGTTACCAGGCGCGGCTTTGAGAGACCTCTTCA
TTCTCAACAACACCGAGTACGTCCTGGCGAACGCTAGGGTGCGAACTGTG
TTTGTTGTTTGTGGCACGTTGTTGTTTTTATTTGTCGGGTGTTGGTGGTG
TCACCGTCGATGTTTTTTCAAAGGTGTCGTCGGTGTTTTCCTCGAAGTGG
GGTGTCGAGGGTGTGAGCTTCTTAGAGGGACATCCTTTAGATGTGTTGAA
CCTTGGAATAGATACCTGGTATGCATGGGGGGCGTTTTAAAAATTAGGAA
GGCACTGTTCCACAAAGTCCGACCCCCGGTTCTCTCCAAAAGTCTGGATT
TTTCTCGTTTGAATACTCCGTACTTCTCTGGGGCGCCGCAAATCGCCGAT
CCGTGTTTTTGTGGTTCCAAAAATTTGGAAAATTTGGAAGAAAAAGCGCC
GCGTCTCCCCATAGCCATCTTTCGGGGCGCAAAAACAAAACATAATGAAT
GTCCAGGTTGGGTAGAGGCCGTCCTCGGCTTTCGATTTATCCGACTGGCG
AGACTTGGCTGTTGTCACGCACAAACGCTTGGTCGGCCAGCTCAGGCTTC
CCGCCAGTGATGCGGCAGCCGAATGCAGTGCAAATCGATGCCACGGCAAC
GCAACCCTCGCGTTTTCCCCGCTCTCTCTTCCCCCTGATTCATTTTGCTC
TCCCCGTTGGTTTGGGGCTCTGCTTTCCCGTGCACGACAACAACGACATC
GGCAACAACAACGTCGACAACAACAACGGCATCGGCAACAACAACGTCGA
CAACATCGACCACGACGACAACATCGGCAACGACAACATCGACCACAACG
ATGTCATCGGCAACAACGACGTCGACCACAACGATATCATCGGCAACAAC
GTCGACAACATCGACCACAACGATGTCATCCGCAACAACGACGTCGACCA
CAACGATATCATCGGCAACAACGACATCGACCACAACGATATCATCGGCA
ACAACGACGTCGATCACAACGATATCATCGACAACAACGATATACTCGAC
AACAACGATATACTCGACCACAACGATATCATCGACCACAACGATATCAT
CGGCACCAAACGGCGTCGACGTCGGTAACATCGACACCGACAACAACGGC
AACCGCAGACGCCGTTTGCGGGTCTGACACTCAACACTCCCGGTACGGCC
CCGTCGCCGACTCCCGCAGAGGAGTTCCGGTCCATCTTCGGCGAGGCCCC
TTCTGCGGCCAGCGCCTCCGACGGAGCCCGGAGCCCGCGGGGCGGTGGGG
TGAGGTAAGTCGACTCTGTTTTGGCTTTGGGGTTGGTTTCTGCTGCGAGA
GCCCCAGAGTCTGTTTAGCTTCTGGCTCTGGATCATGGTTTGTGCTGGAG
CGGGTGCCACATATGCTTTGCGTACGGTGTGTGTGTGTGTGTGTGTGTGA
CGTGTGTGTCTCTCTCTGTGTGTTGTGTTGTGTGTTTTATTTCAACGTCG
TGAAAGACAAACCCCAGTTGTGCTGGTTGGATTGCGCATATTATCGGTCG
TTGTACATAATATGGCCCGTCCAGGGCAAAATGTCCATTCTCGCTTTTTC
GCGATAACTTGTGAAAACAATCGAGTTAAGACAGTTTTTTCAGCCACGAT
AGTGATTGATCCCCACATGAAGGGGAAGAAAATACAGGGAAAAAAGTCTG
GGTTTTGGACAAAATGTTGAATATCTCGCGAACCAGATCAAAAATCGGAA
ACAATTTTTACCCCTGGGGTATATCGACAGGAATCAATGCCGTGGTCTAT
TTGAAAAGGTTTTAGGTTCGATTATCGCAGGAAAAAGCGAACAAAATGGC
CTCTAAAATACAGTGTCGCCCGATAACTTATTTGATTCTTACTCAAATAA
AAAAACACGCCCCAGGAAAAAGCGAACAAGAATTCGGAGTTATTTGCGGA
TAGAACGCGAGCGGAGAAAAAAAAAACTCTCCACAGGATCATGCGCCTGG
AGACAGTGCGTTTGCCGGTACTTTCGGTTTTCGGAACAACCATATATGTG
CAGAAAAACAAATACCTGAGTACAGGACGGAATTGTGGAAAGTTTGGTCT
GGACGGACCATACTTCGTTTACACACTTCGAAGTACATATGTACAAACGT
GTTGTTTTTCCTGTTGTCGTTGAGTTGCAGCAGCTGTTGGCGGCTGTTGC
CCCCGTTCGGGTTCAGCACTTTCCACGGCTGATCGGCTTCATGACATCAT
TTTCACTCTAGGTAGATATGTGTCTATATTCAAGACGCTTTTGTGAATCC
GTCGTTTGGTGTCGATTTCGGAGCTGCGGCGCTTGGATCTCGCGCACCCT
GGGAACATTACATGGGTCGTTAAGGCAGCACTGCAATTATCCGCCTCCTC
CTTGTCGGCGGGGGGGCCGCCGTGTTTCCCGTGAGCTGGGTGGGGTCTTG
CGGCAGTCGGACCGGACCCGCCTTCGCGAAGAAATTAACTATTTTATCTA
GGAAATAGAGACAGGGGAGGGGTTCCGCAACCCTAACCCAAACCCTCACC
CCCAAACCCCGACCCCCCTTTCCCGATCTCCTATAACTTTTATCCTATAC
GAAGTGTGTTAGCTTCAGAGAAAGCCTTCGTATTGTATAGGCTAGCTATT
TACCTGCGAAGGCCATTCCTCGCGATCCCGAACACCCAGGCCTGACAACG
CCCGAAACCTCCCCACCTACCCACCCTTGTTCCGAGTGCCGACTAGGCCG
AAATCGCCCAGGCGATGGGGCTTCGGGGGTTCCAAGAGCAAGGATGCCGT
CACAAGGGCGGCGGCGGCGCGGTGAGTAACTATTGGTCCCCCACGTAGGT
AGAAAAGTGCCTCAGTTATTTATTTTATTCTTGCACAAAGTCATGCGAAT
GTGGCAGTTTCTCGTCAGCGGTTGCCATGCTCACGCCCGGAGCATCTGTA
GGGCTTTTCTTTGCTTAATATACCATGCATGCTTCGCCGGCGGTTTTTCT
TTTCTCAAAAAGCTCGATAAAACCACATGTCGGGTTCCGAGGTAATACCC
AAGCTTGCTTTTACGTCCCCCTGCATAGGCACCCCAGCTCTGAATAGCGA
TAAATGTCAAATCTCTTGGTACTCTCCAAACGCGTGCCAATTGTTTCTCG
TTGTTTTCTTGTTTAGGTCGGCGGCGGAAGGGCTTGTCGGGCCCGATGCC
GGGGACGACGAGCTGCAGGGCCTCAGCATCGCCGACTTCATGACGGACAA
CATGTCGTCCCTTCTCAAGAGGCAAGGTTTTTGTTCTGTCCAGCTTTTGT
TTTGTATTTTTGTTTTCGCAGCTAGGTGTGTAGATATCCACGGTCAACGT
ATATTTAGGAGGTACATATTTAGTGAGATTTCAAGCTCGAAATAATGTCC
TCCTCACTTGGGCGTTGTCGAGAGCTATGTGCCTTAGAGCCCTACCTCCC
AGGACAACGTGCCATCGTTGAGCCCCGGCCTTCTGTTCTCTTGTTTCTCA
CCAGGTTGGTACATGAGAAGAAGACGGGCTACATGGAGACCCTCCTGACC
CCTCTGGTCGCGGCGGCTAAGGATGACGTTGGGGAGCTAAAGTGAGCAAA
AACTTGTGTATGTAGCTCCGTAAATCTTTTTTATTTTTGCCCTCCGCGCA
CTAATAGTTTTTTGCGGCTTGTGGTGGTCGTGGTGGTATGGGTGTTGCCC
TCACGATCGTCAGTTTTGGTGTCGTTAGATACGTTTGGTTAGCGGTGCTG
TCCCTAGATCGATGCTGTCCCCAGATCGACCTTTCTCGAGAATCTGAAGC
ACCCCGTGCCCCTTTGGAGAAGAACACACACAGATCGCAGAAACGACGGT
TCTTCGGTGAATGAAACTTGATCGCAATGTTTTCATGGTTTTCCTTCTGT
CTGTCAGGTACCAGCGGGGCAAGCTGCTCACGTTGGATTGCGGCCGGGTG
CTGAAAGCAAAATTCACCGCCTTCAACGAGAGCTGGGAGGAGGTGCGGTT
GCCGCACGCACTTGTTGGAGGGGGGTGTCCAGTGCCAAATCAGTGTTTTG
TTTTTTGAAGCGGAGCGCATCGAGTGTTCTACCCAAAAGTATGTGTTTGG
TGTGTGGTATGTAAATAGTAGCGGTTGTTGTTGGCCTTTTTGTCGTCCCT
GGTCTTGTTTTTTTGTCACTCCTCCGGTGTCGCTCGCGTTGAATGAAGGA
CGAAAGGGGGTGGGCCAACGCTCTCCTGTTGTTGATCACGTGGCAGCAGG
GATCAGCCTGCGCTTCCTATCCCGAACACTGGAGCCCACTTTTCGTAAAT
ATAACTTGTCGACTTGTCTCGACGAATAAAGTTTCGTCCCGGGCCCGGCT
TGTGTTCCTTTTGCGTTCGTTTGTGCGCGCTCTCCACTCCTGTTTTGAAC
CACCAGGTGTACCACTCGCAGCTGTCCGTGTCCGTGGTGGACCCCGGCCG
GAGGGTCAAGCTGAAGGAGGAAGCCAAGACGAGGTGTCTTGTGCCCTACA
GGTAAAAACAAAACGGACAGCCTTCGCGAAGAATGAAGAATTCCTTCCTC
TATATAGGCCGTAACCGTAACCGTAACCCCAAACCGACCCCCCATTAGCC
ATTTCCATACTTTATATCCCATATAATTTCTTCCAGTAAAAGCCTGCGAA
GGCTACTGAAGATAACACACACACATATTACATAACGTTTTGTCGGGCAC
ACTATCTGTGAGTTATAAATACATAAATCTCCGTAAATGTGTCGAATATC
ATACTTCTACAAAGAAGGGTCCCGCTCGCTGTACACCCCTCTTCTCCTTC
CTCAGCAAGATTTCTCGGGGCGTTTGTTGGTATATAGATACCCCGTAAAG
GTAGTCTCTCTCAAGTTTGTTGGTATATAAGATACTCCGTAAAAGGTAGT
CTTATTGTAAGAGACATTGTTATTTCTCCGTAGATAAGGTAGTATTTCTC
AAGTTTGAGGGTATTGTCGTATCTGCTGCGGCGGCATGAGTGTATATACC
AGTTTCTCGATATGAGGCCGTTCGAGGACGCTACTACTTCTCCAACCGGA
AGCAGGTTCCGGTTAAACCCACAACGGCTCTTCGTAGAATTGCGTGGTGT
GTACCGCATAGACCGCTCCCCCGCCGTATGTATTGTGTATCAAGATACGA
GCCTGTTTTGTTTACCGGGATAACCCGCAACGGTTGCCCCCACAGGCCCG
CTCTTCCACTCCCTCATAACAGCTTCAAATGGGCTACACATTTACCCTTA
TATATCCTCGCGACAAATGATCTGAGGCAAGCACCGCAGAAGGTGGGAGT
GGGGGGGGCTCGCGGAGAGGCCCCCTCCTGTGTGACCACGGTTCAGTACT
CTGGCAAGATGCCCTGGTGGCAAGGAGCCCGCCGAGTACTGAAGTAAATG
CAAATAAAGAAAAATAATGCACCCACTTGCACACGATAGTAGGAACCAAA
CGCGCGCGCCTTCTCCGCCGCCCCCAACACCTCCACGTTCTCGGCAGAGA
GCTGTACTTCAAGTACGAGGGCGTCCAATTTAGCAAGAAGCACCAGGACC
AGTATCTCAAGTATACCCCGGACGCGATCGACCAGGGCATCAGCCAGCTC
TTCTCGGGGTAAAGCATCTTGATCAGGATCTTCTTTATCTTCATCTTCAT
CTTCATCTTGAACTTGTACGATGTAGGCAACTACAGCAGTCTACTGTAGC
AGGATCCTGCAGAAAAGGGACAGGTAGAGAAAGCGGAGGTGTAGGGACAT
AGATGTGCACGAGTGCGGGTCACGTTTTTGTGTCCAGCAGAGGGAGTTTT
GGGTTCGGTAGAGGAGGTTTTGGGCCGGGGCATTGCGCTGTGTGGGTGCG
GAACGGAGCCTACTTCGGAACGCCACTTGAATTGACTGCCCGGCTGAGTC
ACACTCGCTGCCTCGAATTTGGGTGCGGCCCGGAACTTGTATGCGGTGGT
GGGTGTGTAGAGGAGATAAAACCACCGAACAGGCTTGGGCAAAGCCACGA
CCAACACGGCTTTCTTTTTTTCACGCCGTCACCGAGTTATGTACGCGAAT
GTTGTGCTAAAGTTTGCGGGGCTGCCCGTGTGCTGCCTGCGGATCGAGAG
CGGTGCTGCGAGGCCTGCGGTTTTTTCAATTCATCAGAACGCTTTACTCG
GGGGGTGAGCTTCACCGCTAGGTGCATTATCTTATGCAATTGAAGTGCAT
TTGCTACATACATATGGAGTAGTGCTGGTCTGGTAGACACAGCTTCGTGA
AGCTGGAGGCTGCGCTTGTATTTTTGGCAACGGTGTATGCACCGCCTCCA
CAAACTGCTCCGAGTAAATACCTGTGTGTACATGGTAGATTTCATCCTGG
CCATGTGTCGTACATACGCTGTTCACAAACTCGACCTTGGTGCTCAGTTC
TGAGCGTATTGCTCTCGCTCATAAGTGTTTACGTAGTGTCGGGCCACACC
AGACATACGCCCGGCGGTCACCAAAGCCGACGAGAAATAGTTCGTGCATA
CCACACCCCATTTCTCCTCACACACAGCGAATGCCCCCGAGGCAAGAATA
AAGTGGGCACCTCATCAGCCGTTACAGCAGGATAAATACCACGAATGCAC
ACATGACTGCGCAACTCGCCAAAGCTCTCGGTTCCCACCGTACTCGCCTT
ACTACTAGCTGTAACACCGTTGCAACAATGTACGCCTTTTCTCTTTAGGT
TGAGACGCCCACTCTTATCTCGGCTGCAGCCTCCGACTGCGGGGAAGAGC
TTTCCACGGCGGGGATGGCCGCCCGTTTACGTGTTTCCTCTGCTTTGACT
GCAACCTGGGGGGTGAATCCGGCCGGGCGAAGTCGCTTGCTGGGCCCTGC
GCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGGGAAGAGGGCTTG
CCGCCGAGTCATGTTCGTCTTCTGCCTTGACCGCGACAGAAACTGGAAGG
CCTGCGCCGGCATGCGAGGCTCGCTTCTTCTCCGGCCCGCGGACGAGGAC
ATTAACACCAGGTTCGTCACGCCCACGCTGCTTCCCGCTGCTTCCCTCAA
CACACCCGGCATCACTACCGACTCCCCCCACGCCCCCGGCATCACCGCCG
ACTCCCTCAACACCCTCGCCACCGACACCCTCTGCATCATCATTGGCATC
ATCGTCATTGATTTCATTCGCAAACATCGGGGTGGCGAAGATGCGGTTCG
CCATGGGGAGCGTCTGATCGACATCGATCGCTATCATCCACTCGTACGCC
TTCTTGGCATCTCCCTCGTCTTTGAACACATCGAGTAGGCACAGTCCAGC
ATCACTCCGTACAGCAACATCAAGCACCCCCCCCCAGAACTCCCGGTTCT
CTACCCATCTCTCGGCAACGGGAGAGCGAGTGTACAGAAACAAGGCTTTG
AGTGTCAGGTGGGCGTTCTGCAACGATGGCTCCTTGCTGATGATACCCTG
CCCGAATGTGTGCTGCATCTCTAGTTCTGCTGCCGCTACCAGGTCCCCCG
CGGTCTTAAAGCCCTCGCCAAGAAGAGACGCCTCGATGAACATGTCAATC
ATCTCTCCGCGAGAGAATAGCCTGAATTCGAGCATTCTGCCAGGCTGTGG
TGTAATAACAACAAATCGGTGAGGCAACAAACGAACAAGGTCTAGTCAGC
ACTTCCATACAAAAGAATGACGCTGATGAACAGGATGGCTATTGTGTGGA
TACGATGTTCGGCGACGCTCCGCTGCGACCAACTTGTAGTACTCACATCT
ACTCCCCGCTCTTTCGCTTCTGCCCTGAACACTCGACGCCCCTTGACGTT
CTGTTTGCCAGCTATCGTCTTGCCCGCGTC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1359:2914..11543- >mRNA_L-elsbetiae_contig1359.2729.1 ID=mRNA_L-elsbetiae_contig1359.2729.1|Name=mRNA_L-elsbetiae_contig1359.2729.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=828bp|location=Sequence derived from alignment at L-elsbetiae_contig1359:2914..11543- (Laminarionema elsbetiae ELsaHSoW15) ATGACGGACAACATGTCGTCCCTTCTCAAGAGATGACGGACAACATGTCG TCCCTTCTCAAGAGGTTGGTACATGAGAAGAAGACGGGCTACATGGAGAC CCTCCTGACCCCTCTGGTCGCGGCGGCTAAGGATGACGTTGGGGAGCTAA AGTTGGTACATGAGAAGAAGACGGGCTACATGGAGACCCTCCTGACCCCT CTGGTCGCGGCGGCTAAGGATGACGTTGGGGAGCTAAAGTACCAGCGGGG CAAGCTGCTCACGTTGGATTGCGGCCGGGTGCTGAAAGCAAAATTCACCG CCTTCAACGAGAGCTGGGAGGAGGTACCAGCGGGGCAAGCTGCTCACGTT GGATTGCGGCCGGGTGCTGAAAGCAAAATTCACCGCCTTCAACGAGAGCT GGGAGGAGGTGTACCACTCGCAGCTGTCCGTGTCCGTGGTGGACCCCGGC CGGAGGGTCAAGCTGAAGGAGGAAGCCAAGACGAGGTGTCTTGTGCCCTA CAGGTGTACCACTCGCAGCTGTCCGTGTCCGTGGTGGACCCCGGCCGGAG GGTCAAGCTGAAGGAGGAAGCCAAGACGAGGTGTCTTGTGCCCTACAGAG AGCTGTACTTCAAGTACGAGGGCGTCCAATTTAGCAAGAAGCACCAGGAC CAGTATCTCAAGTATACCCCGGACGCGATCGACCAGGGCATCAGCCAGCT CTTCTCGGGGTAAAGAGCTGTACTTCAAGTACGAGGGCGTCCAATTTAGC AAGAAGCACCAGGACCAGTATCTCAAGTATACCCCGGACGCGATCGACCA GGGCATCAGCCAGCTCTTCTCGGGGTAA back to top
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