mRNA_L-elsbetiae_contig13529.2699.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A6H5L7F0_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F0_9PHAE) HSP 1 Score: 131 bits (330), Expect = 1.080e-29 Identity = 70/104 (67.31%), Postives = 83/104 (79.81%), Query Frame = 1 Query: 400 REATFNR--LSCSKRNNGDDNRLN-GDG-DAALSITTFNVLAPIFKRVGTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQRCVYRERM 699 R +TF+ + C K + DDNR++ GDG D LSITTFNVLAPIFKRVG GRESEFRE YLERH AI++H+K VGSDV+CLQELW+AEQEMVDMY+R + RM Sbjct: 86 RSSTFSDSFVRCDKES--DDNRVDRGDGGDETLSITTFNVLAPIFKRVGNGRESEFRETYLERHKAILKHIKGVGSDVVCLQELWVAEQEMVDMYRRGLRGYRM 187
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: D7G0H3_ECTSI (Carbon catabolite repressor protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0H3_ECTSI) HSP 1 Score: 127 bits (319), Expect = 2.310e-28 Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1 Query: 448 DDNRLN-GDG-DAALSITTFNVLAPIFKRVGTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQRCVYRERM 699 DD R++ GDG D LSITTFNVLAPIFKRVG GRESEFRE YLERH AI++H+K VGSDV+CLQELW+AEQEMVDMY+R + RM Sbjct: 60 DDKRVDCGDGGDETLSITTFNVLAPIFKRVGNGRESEFRETYLERHKAILKHIKGVGSDVVCLQELWVAEQEMVDMYRRGLRGYRM 145
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: UPI00053F6FC4 (uncharacterized calcium-binding protein At1g02270-like n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053F6FC4) HSP 1 Score: 81.3 bits (199), Expect = 5.900e-13 Identity = 37/66 (56.06%), Postives = 52/66 (78.79%), Query Frame = 1 Query: 484 LSITTFNVLAPIFKRVGTG-RESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 678 +S TTFN+LAPI+KR+G G RESEFREA+L R+ +I++ L + S VICLQE W+ +E+V MY++ Sbjct: 60 ISCTTFNILAPIYKRLGGGVRESEFREAWLSRNQSILDRLLHLKSSVICLQEFWVDNEELVGMYEK 125
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A7C9A3V8_OPUST (EF-hand domain-containing protein n=2 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9A3V8_OPUST) HSP 1 Score: 77.4 bits (189), Expect = 9.710e-12 Identity = 35/66 (53.03%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 484 LSITTFNVLAPIFKRVGTG-RESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 678 +S TTFN+LAPI+KR+G G RESEFRE++ R+ +I++ L + S VICLQE W+ +E+ MYQ+ Sbjct: 22 ISCTTFNILAPIYKRLGGGVRESEFRESWRSRNESILDTLLRLKSSVICLQEFWVGNEELAGMYQK 87
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A1U7Z2P5_NELNU (uncharacterized calcium-binding protein At1g02270-like isoform X4 n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7Z2P5_NELNU) HSP 1 Score: 76.3 bits (186), Expect = 1.000e-11 Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 448 DDNRLNGDGDAALSITTFNVLAPIFKRVGTGR-ESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 678 ++ LN + +S TTFN+LAPI+KR+ + R ES+FRE +L R+ I+E L + S +ICLQE W+ +E+V MY++ Sbjct: 17 EEQHLNANHLGDISCTTFNILAPIYKRLNSERRESDFREYWLSRNECILERLLHLKSSIICLQEFWVGNEELVGMYEK 94
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: UPI001929ED3E (uncharacterized calcium-binding protein At1g02270-like isoform X1 n=3 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929ED3E) HSP 1 Score: 77.0 bits (188), Expect = 1.350e-11 Identity = 37/78 (47.44%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 457 RLNGDGDAALSITTFNVLAPIFKRVGTG----RESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 678 R G G+ +S TTFN+LAPI+KR+ T RESE R +L R+ +II+ L S +ICLQE+W+ +E+VDMY++ Sbjct: 17 RTMGGGERCVSCTTFNILAPIYKRLDTEDQSLRESEHRAYWLSRNESIIDRLLCDRSSIICLQEVWLGNEELVDMYEK 94
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A4S4DTX4_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis var. sinensis TaxID=542762 RepID=A0A4S4DTX4_CAMSI) HSP 1 Score: 75.1 bits (183), Expect = 1.550e-11 Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 484 LSITTFNVLAPIFKRV-GTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 678 +S TTFN+LAPI+KR+ G ESEFRE +L R+ +I++ L ++ S +ICLQE W+ +E+V MY++ Sbjct: 24 VSCTTFNILAPIYKRLNGQNCESEFRELWLSRNESILDRLLTLSSSIICLQEFWVHNEELVTMYEK 89
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A7J6VXI7_THATH (Calcium-binding endonuclease/exonuclease/phosphatase family n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6VXI7_THATH) HSP 1 Score: 70.1 bits (170), Expect = 2.280e-11 Identity = 31/71 (43.66%), Postives = 49/71 (69.01%), Query Frame = 1 Query: 475 DAALSITTFNVLAPIFKRVG----TGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQ 675 D +S TTFN+LAPI+KR+ + RESE++ +L R+ +I++ L S +ICLQE W+ +E+VD+Y+ Sbjct: 3 DPCISCTTFNILAPIYKRLDKENQSSRESEYKAYWLSRNQSILDRLLYDRSSIICLQEFWVGNEELVDIYE 73
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: A0A1U7Z070_NELNU (uncharacterized calcium-binding protein At1g02270-like isoform X1 n=3 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7Z070_NELNU) HSP 1 Score: 76.3 bits (186), Expect = 2.430e-11 Identity = 35/78 (44.87%), Postives = 54/78 (69.23%), Query Frame = 1 Query: 448 DDNRLNGDGDAALSITTFNVLAPIFKRVGTGR-ESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 678 ++ LN + +S TTFN+LAPI+KR+ + R ES+FRE +L R+ I+E L + S +ICLQE W+ +E+V MY++ Sbjct: 17 EEQHLNANHLGDISCTTFNILAPIYKRLNSERRESDFREYWLSRNECILERLLHLKSSIICLQEFWVGNEELVGMYEK 94
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Match: UPI0010360AE3 (uncharacterized calcium-binding protein At1g02270-like isoform X1 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010360AE3) HSP 1 Score: 75.1 bits (183), Expect = 3.610e-11 Identity = 33/66 (50.00%), Postives = 50/66 (75.76%), Query Frame = 1 Query: 484 LSITTFNVLAPIFKRV-GTGRESEFREAYLERHTAIIEHLKSVGSDVICLQELWIAEQEMVDMYQR 678 +S TTFN+LAPI+KR+ G ESEFRE +L R+ +I++ L ++ S +ICLQE W+ +E+V MY++ Sbjct: 24 VSCTTFNILAPIYKRLNGQNCESEFRELWLSRNESILDRLLTLSSSIICLQEFWVHNEELVTMYEK 89 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13529.2699.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13529.2699.1 >prot_L-elsbetiae_contig13529.2699.1 ID=prot_L-elsbetiae_contig13529.2699.1|Name=mRNA_L-elsbetiae_contig13529.2699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=198bp MPRMTLRRRLRPGVPKLVSGLVVLVMQLFTCCDAFFGMSGGAAFSSSCWRback to top mRNA from alignment at L-elsbetiae_contig13529:450..2904- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13529.2699.1 ID=mRNA_L-elsbetiae_contig13529.2699.1|Name=mRNA_L-elsbetiae_contig13529.2699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2455bp|location=Sequence derived from alignment at L-elsbetiae_contig13529:450..2904- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13529:450..2904- >mRNA_L-elsbetiae_contig13529.2699.1 ID=mRNA_L-elsbetiae_contig13529.2699.1|Name=mRNA_L-elsbetiae_contig13529.2699.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1188bp|location=Sequence derived from alignment at L-elsbetiae_contig13529:450..2904- (Laminarionema elsbetiae ELsaHSoW15)back to top |