mRNA_L-elsbetiae_contig1347.2667.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1347.2667.1
Unique NamemRNA_L-elsbetiae_contig1347.2667.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE)

HSP 1 Score: 455 bits (1171), Expect = 6.260e-151
Identity = 255/384 (66.41%), Postives = 285/384 (74.22%), Query Frame = 3
Query:  792 MISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKG--------------ISKYPTKDLLIQCLTRLWESAGIGDGDRCSKIFIGKPSGATAGVEGLFSNDGIQYGGVFQVARESAADAVDILAHRQVQPCLLITDIPC-RIEPIAERLHAGLLQ-----GGGALPRNAEGQVCLKELQHVGARAHEFPDLHEVKVPPKEFPSPTVDSASEGDC-----LFTVYMAFAAGEPAPSVQAHLDFRALLQRAGDVVESNREIQAAERAAAEEGASGVSDWSSSPKRISNEAETTLKSLHKKGWHAMTLFEVVLVYWLWFGAAGSAAPAEEAQGPAP 1868
            MISKMVF  RLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEG PERGDAG+LLRALGDGAI+DLS KT DDL+NIYRLCYPP  +               + ++P  +LLIQCLTR WESAGIGD +RCS+IFIGKPSG T GVEGLF  DG+ Y  VFQVARESAAD VDI++HRQ       T +P     P+ +  H          GGGALPRNAE QVCLKELQHVGARA+EFPDL+EV+VPP EFPSPT  +AS  D      + TVY A+A G+P P VQ HLDFRALLQRA DVVE NRE+ A E       ASGV DWSSS KRI++ AE+TLKSLHK+GWHAMTLFEVVL+Y LWF AA  AAP +E QGPAP
Sbjct:    1 MISKMVFDRRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGAPERGDAGDLLRALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESAGIGDRERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISHRQSS-----TTMPADHGYPMHDCTHCREASPRSTPGGGALPRNAELQVCLKELQHVGARAYEFPDLNEVRVPPMEFPSPTT-TASASDAHPAQSVPTVYAAYAVGQPMPGVQPHLDFRALLQRACDVVERNREVHATEG-----NASGV-DWSSSAKRIADLAESTLKSLHKQGWHAMTLFEVVLMYMLWFQAAAHAAPEDEEQGPAP 372          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 2.200e-137
Identity = 236/429 (55.01%), Postives = 289/429 (67.37%), Query Frame = 3
Query:  552 RSIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESA-GIGDGDRCSKIFIGKPSGATAGVEGLFSNDGIQYGGVFQVARESAADAVDILAHRQVQPCLLITDIPCRIEPIAERLHAGLLQGGGALPRNAEGQVCLKELQHVGARAHEFPDLHEVKVPPKEFPSPTVDSASEGDCLFTVYMAFAAGEPAPSVQAHLDFRALLQRAGDVVESNREIQAAERAAAEEGASGVSDWSSSPKRISNEAETTLKSLHKKGWHAMTLFEVVLVYWLWFGAAGSA 1835
            RSI DHNF + + E Y+AFEALT+H ++F SY  GR+PEI+ IDGCAKI TD+  T  F++AR ER VDTD Q  LLK+SMISKMVF  R+R+V+EAAPT    NRISN+M RTARGK+A  G P+ GD GEL++ALGD AI+DLS K+  DLKNIY LC+  G KGIS++  KD L+QC   LW S  G G G+RCSK+FIGK  G TAGVEG F+ DG+ Y  VFQ+A ESAADAVD+ AH  V P L+ITDIPC + PIAERLH  LL+  G LPR+A+G V L  LQH+GA AHEFPD H VK P + FPSP   SA++   +  +Y  +A    +   Q H++F ALLQR+            A  A AE     V D SS  KR    AE  L SLH++G +AMTLFEVV V+  W   A +A
Sbjct:   34 RSIADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFA-GRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDV-VVDNIYAVYADANFSLPAQPHVNFGALLQRS------------ARSATAE-----VGDTSSLSKRFCTLAENQLISLHQQGCYAMTLFEVVAVFSAWLHRAVNA 443          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 1.960e-107
Identity = 171/259 (66.02%), Postives = 203/259 (78.38%), Query Frame = 3
Query:  531 LMTVPCCRSIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESAGI-GDGDRCSKIFIGKPSGATAG-VEGLFSNDGIQYGGVFQVARESAADAVDILAHRQVQPCLL 1301
            L  VP  RSI+DHNFH +I +AYFAFEAL +    FVS++ GR+ EI CIDGCAKICTDDVS E F++AR ERDVD DL   +LK+S+ISKM F  RLRWV+EAAP   PHNR+SNVM+RTARG++AP G PE GDAGEL+RALGDGAI+DLS K V DL+NIYRLC+   GKGIS YPTK+LL+QCL +LWESAG  G+G+RCSK+FIGKPSG+TAG VEGLF+ D +    VFQ+  ES ADAVD+L H  V  C L
Sbjct:   53 LPRVPSSRSIEDHNFHALIKQAYFAFEALVQPF-GFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFI-DGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLVTYCTL 309          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 8.480e-97
Identity = 158/252 (62.70%), Postives = 184/252 (73.02%), Query Frame = 3
Query:  552 RSIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESAGIGDGDRCSKIFIGKPSGATAGVEGLFSNDGIQYGGVFQVARESAADAVDILAHRQVQPCLLIT 1307
             SI+DH FH +I EAYFAFEAL +H   FVS++HGR+PEI CIDGCAKICTDDVS E F++ARVERDVD +L   +LK+SMISKMVF   LRWV+EAAP   P                 P G PE GDAGEL+RALGDGAI+DLS K+  DLKNIYRLC+P  GKGIS YPTK+LL QCL +LWE A  G+G+RC K+FIGKPSG+TAGVEGLF+ DG+    VFQ+  ES ADAVD+L H  V  C L T
Sbjct:   13 NSIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFGP----------------TPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFP-DGKGISMYPTKELLAQCLQKLWELAD-GEGERCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVHLPVSYCTLST 246          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5L3W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3W5_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 5.040e-92
Identity = 178/368 (48.37%), Postives = 221/368 (60.05%), Query Frame = 3
Query: 1122 GDGDRCSKIFIGKPSGATAGVEGLFSNDGIQYGGVFQVARESAADAVDILAHRQVQPCLLITDIPCRIEPIAERLHAGLLQGGGALPRNAEGQVCLKELQHVGARAHEFPDLHEVKVPPKEFPSPTVDSASE------GDCLFTVYMAFAAGEPAPSVQAHLDFRALLQRAGDVVESNREIQAAERAAAEEGASGVSDWSSSPKRISNEAETTLKSLHKKGWHAMTLFEVVLVYWLWFGAAGSAAPAEEAQGPAPTXXXXXATGAEXXXXXXXXXETSGVDGVEPESVPGMGSEAGSGGDDTPPLRKIADLRRSEFLLIAMHLREVLRVAIGATSSSDGLA-DMTLPDFVADHILYESRPEAGTADNT 2204
            G+G+RCSK+F+GKPSG TAGVEG F+ DG+   G FQV  ESAAD VDILAH  VQPCL+ITDIPC+I PIAERL  GLLQ GG LPR+AEGQVCLKELQH+GA A+EFPD HEVKVPP  FP+      +                     E AP VQ H+DFR+LL+RA D               A++ A  V+D SSS  RIS+ AE+TL  LHK+GW+AMTL+EVVL+Y+LWF A G A P  EA G                                  +V G   E G GGD+TPPLR+I++L RSE   I  +L+ VLRVA+G   +++  +  + LP+F+ D +LY    E G  D+T
Sbjct:    5 GEGERCSKLFVGKPSGTTAGVEGFFTTDGVFVYGTFQVTPESAADVVDILAHILVQPCLVITDIPCKIVPIAERLFPGLLQDGGVLPRDAEGQVCLKELQHIGAHAYEFPDEHEVKVPPMGFPTAAFTLGASPVQXXXXXXXXXXXXXXXXAETAPGVQPHVDFRSLLRRAAD---------------AQDRARTVADPSSSLMRISDLAESTLNGLHKRGWYAMTLYEVVLLYYLWFQATGWATPEGEAPG----------------------------------AVAGAEGEGGRGGDNTPPLREISELSRSELATITSYLKGVLRVAVGLAEATEATSLSLGLPEFLTDDVLYIEVAEGGAEDDT 323          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5K5W4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5W4_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 5.040e-88
Identity = 208/549 (37.89%), Postives = 259/549 (47.18%), Query Frame = 3
Query:  552 RSIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESA-GIGDGDRCSKIFIGKPSGATAGVEGLFSNDGIQYGGVFQVARESAADAVDILAHRQVQPCLLITDIPCRIEPIAERLHAGLLQGGGALPRNAEGQVCLKELQHVGARAHEFPDLHEVKVPPK--EFPSPTVDSASE--GDCLFTVYMAFAAGEPAPSVQAHLDFRALLQRAGDVVESNREIQAAERAAAEEGASGVSDWSSSPKRISNEAETTLKSLHKKGWHAMTLFEVVLVYWLWFGAAGSAAPAEEAQGPAPTXXXXXATGAEXXXXXXXXXETSGVDGVEPESVPGMGSEAGSGGDDTPPLRKIADLRRSEFLLIAMHLREVLRVAIGATSSSDGLADMTLPDFVADHILYESRPE 2183
            + I DHNF   I +AYFAFE LT+H  DFVSYL+G  PE++ IDGCAK+ +DD +  HF+ AR ER VD DL   LLK+SMISKM  +                                                                                         I C  +LW  A G  + DRCSK+FI +PSG TAGVEGLF+ DG+    + QV                  P +L+TDIPC + P AE+   GLLQ GGALPRNA+GQV L  LQH+GAR +++PD HEV+VPP    F S +  S +       + VY AFA     P VQ H+DF ALL+ AGDVVE NR++Q            G  DWSSSPKRIS  AET+L+ LH++G +A+ LFEVVL Y LWF  A  A P                                         V  +     SGGD  PP   I DL R+E  +IA HL E+LRVA G+   + GLAD+ +P FV +     S  E
Sbjct:    5 KLIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMEDF-----------------------------------------------------------------------------------------IGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPLWTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQVSLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVYDAFATALSGP-VQPHIDFSALLKHAGDVVERNRQVQ------------GTDDWSSSPKRISELAETSLRYLHQQGCYALNLFEVVLAYALWFQEASVADP----------------------------------------HVHLLQGGRESGGD--PPESAITDLSRAELGMIAAHLMEILRVAAGSPPPARGLADVEVPSFVLEKYFLYSHAE 409          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 2.000e-81
Identity = 143/237 (60.34%), Postives = 167/237 (70.46%), Query Frame = 3
Query:  504 VA*TQPSSVLMTVPCCRSIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESA-GIGDGDRCSKIFIGKPSGATAGVEGLFSNDGI 1211
            +A T   S   +VP   SI DHNF   I +AYFAFE LT+H  DFVSYL+G  PE++ IDGCAK+ +DD +  HF+ AR ER VD DL   LLK+SMISKMVF  RLRWV EA PT    NRISNVM RTARGK  P G  E GDAGELLRAL  G + DL+ KT+DDLKNIYRLC+P GG+GIS Y  K+  I C  +LW  A G  + DRCSK+FI +PSG TAGVEGLF+ DG+
Sbjct:    1 MATTAVLSPAASVPL--SIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFP-GGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGV 234          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 4.190e-71
Identity = 112/156 (71.79%), Postives = 130/156 (83.33%), Query Frame = 3
Query:  552 RSIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNI 1019
             SI+DHNF  +I +AYFAFEAL +H   FVS++HGR+PEI CIDGCAKICTDDVS E F+ AR ERDVD DL   +LK+SMISKMVF  RLRWV+EAAP + PHNR+SNVMHRTARG++AP G PE GDAGEL+RALGDGAI+DLS K+V DLKNI
Sbjct:   13 NSIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKSVSDLKNI 168          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5JKI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI4_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 1.780e-68
Identity = 162/307 (52.77%), Postives = 195/307 (63.52%), Query Frame = 3
Query: 1269 LAHRQVQPCLLITDIPCRIEPIAERLHAGLLQGGGALPRNAEGQVCLKELQHVGARAHEFPDLHEVKVPPKEFPSPTVDSASEGDCLFTVYMAFAAGEPAPSVQAHLDFRALLQRAGDVVESNREIQAAERAAAEEGASGVSDWSSSPKRISNEAETTLKSLHKKGWHAMTLFEVVLVYWLWFGAAGSAAPAEEAQGPAPTXXXXXATGAEXXXXXXXXXETSGVDGVEPESVPGMGSEAGSGGDDTPPLRKIADLRRSEFLLIAMHLREVLRVAIGATSSSDGLADMTLPDFVADHILYESRPEAG 2189
            +A  +VQPCL+ITDIPC + PIA++ H  LL  GGALPRNAEGQV LK LQH+GARA +FPDLH VKVPP  F S T  SA     +  VY  +AA EP P VQA LDFR LL    D+VE +R+++AA  A  E   +G SDWSSSPKRIS  AE TL SLH +GW+A+ LFEVVLV+ LWF AAG        +     XXXXX     XXXXXXXX E  GV           G E G G D+ PP R+IADL   E + I+ HL E LRVAIG+T ++ G   M +P+F+ D +LY S+   G
Sbjct:   10 IATTKVQPCLVITDIPCMLAPIADKNHPDLLDEGGALPRNAEGQVSLKGLQHIGARARDFPDLHSVKVPPGGFTSATASSALGAQPVHNVYAVYAAAEPPPGVQAQLDFRTLLGHHSDMVEKDRQLRAAPDA--EGDVTGASDWSSSPKRISELAENTLASLHNQGWYAIDLFEVVLVFSLWFQAAGR-------EXXXXXXXXXXXXXXXXXXXXXXXGEAQGV-----------GGERGGGADEIPPEREIADLSTKELIDISGHLMETLRVAIGSTDAA-GWTMMCMPEFLGDDVLYYSQSMEG 295          
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 1.060e-54
Identity = 103/169 (60.95%), Postives = 119/169 (70.41%), Query Frame = 3
Query:  786 LSMISKMVFYGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESA-GIGDGDRCSKIFIGKPSGATAGVEGLFSNDGIQYGGVFQVARESAADAVDILAHRQVQ 1289
            +SMISKMVF  RLRWV EA PT    NRISNVM RTARGK  P G PE GDAGELLRAL  G + DL+ KT+DDLKNIYRLC+P GG+GIS Y  K+  I C  +LW  A G  + DRCSK+FI +PSG TAGVEGLF+ DG+    + QV  ES AD VD + H  V+
Sbjct:    1 MSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSPETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFP-GGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHLAVR 168          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1347.2667.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A6H5JUN3_9PHAE6.260e-15166.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKH0_ECTSI2.200e-13755.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KB28_9PHAE1.960e-10766.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEL5_9PHAE8.480e-9762.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L3W5_9PHAE5.040e-9248.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5W4_9PHAE5.040e-8837.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB33_9PHAE2.000e-8160.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTI3_9PHAE4.190e-7171.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JKI4_9PHAE1.780e-6852.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JY55_9PHAE1.060e-5460.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1347contigL-elsbetiae_contig1347:21413..24159 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-16_002930.1
Exons3
Model size2208
Cds size1674
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1347.2667.1prot_L-elsbetiae_contig1347.2667.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1347 21413..23626 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815518.31819-CDS-L-elsbetiae_contig1347:21412..223361622815518.31819-CDS-L-elsbetiae_contig1347:21412..22336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1347 21413..22336 -
1691682937.1960506-CDS-L-elsbetiae_contig1347:21412..223361691682937.1960506-CDS-L-elsbetiae_contig1347:21412..22336Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1347 21413..22336 -
1622815518.3406265-CDS-L-elsbetiae_contig1347:22733..229561622815518.3406265-CDS-L-elsbetiae_contig1347:22733..22956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1347 22734..22956 -
1691682937.2066233-CDS-L-elsbetiae_contig1347:22733..229561691682937.2066233-CDS-L-elsbetiae_contig1347:22733..22956Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1347 22734..22956 -
1622815518.3550625-CDS-L-elsbetiae_contig1347:23099..236261622815518.3550625-CDS-L-elsbetiae_contig1347:23099..23626Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1347 23100..23626 -
1691682937.217757-CDS-L-elsbetiae_contig1347:23099..236261691682937.217757-CDS-L-elsbetiae_contig1347:23099..23626Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1347 23100..23626 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815518.3675742-UTR-L-elsbetiae_contig1347:23626..241591622815518.3675742-UTR-L-elsbetiae_contig1347:23626..24159Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1347 23627..24159 -
1691682937.2258422-UTR-L-elsbetiae_contig1347:23626..241591691682937.2258422-UTR-L-elsbetiae_contig1347:23626..24159Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1347 23627..24159 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1347.2667.1

>prot_L-elsbetiae_contig1347.2667.1 ID=prot_L-elsbetiae_contig1347.2667.1|Name=mRNA_L-elsbetiae_contig1347.2667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=558bp
MTVPCCRSIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCID
GCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFYGRLRWV
VEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISD
LSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESAGIGDGD
RCSKIFIGKPSGATAGVEGLFSNDGIQYGGVFQVARESAADAVDILAHRQ
VQPCLLITDIPCRIEPIAERLHAGLLQGGGALPRNAEGQVCLKELQHVGA
RAHEFPDLHEVKVPPKEFPSPTVDSASEGDCLFTVYMAFAAGEPAPSVQA
HLDFRALLQRAGDVVESNREIQAAERAAAEEGASGVSDWSSSPKRISNEA
ETTLKSLHKKGWHAMTLFEVVLVYWLWFGAAGSAAPAEEAQGPAPTPVPR
PATGAEPAAEPRAEPETSGVDGVEPESVPGMGSEAGSGGDDTPPLRKIAD
LRRSEFLLIAMHLREVLRVAIGATSSSDGLADMTLPDFVADHILYESRPE
AGTADNTE
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mRNA from alignment at L-elsbetiae_contig1347:21413..24159-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1347.2667.1 ID=mRNA_L-elsbetiae_contig1347.2667.1|Name=mRNA_L-elsbetiae_contig1347.2667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2747bp|location=Sequence derived from alignment at L-elsbetiae_contig1347:21413..24159- (Laminarionema elsbetiae ELsaHSoW15)
GGCCGCTTCTGTGGTTCTCCTCTCGCTGCTCCTTCTAGTTTCCCCCACTG ACAAGGCCGGGGTGTTACGTTTGCACTAAAAGCACCTCAGCCACGTGTGT AAGGAGCATATTGCTTGAGATGTTTTGAAACGCCAACGTACTCACGGTGC CATTTTGCCCCGGTCGAAAAAACGCCGTCGAAAAAACGCCCTGACCAAAA ATTTCTAAATGCTCTACTCCTAGGTGGTTATGGAGCCTACTCCACCCCCC TTGGCACAAGGATTGCCCATTTGGCGTTTTGTTTCATATTATACATGTAC CACCAGAGCAGAAGAAGCTTTCCAACTTGCGACGAAGCACCTCATGTTCA AGCAGACAGTAGTACCGACTACTCCAAAATAAACGGAGAACACCACAGGA AACATGGTTTGGCGGCCAACGTTGTTCCCTTTTGAGATTTCATGTGTCGA GTGCTCCTGTACTGTCTCTCTAAGATAATTCATGTTGTGTCGGACATTTC GGCGTTGCCTGAACCCAGCCCTCTTCCGTTCTCATGACGGTTCCCTGTTG CCGCAGCATCGACGACCACAACTTCCACAAGGTGATCATGGAGGCGTATT TCGCTTTCGAAGCCCTGACAGAGCACGTACACGATTTCGTGAGCTACCTC CACGGACGCTATCCGGAGATCCTCTGTATCGATGGCTGCGCCAAAATATG TACGGACGACGTTTCGACGGAGCATTTCGAGGTTGCGCGGGTAGAGAGAG ACGTGGACACGGATCTTCAACAGTACTTGCTAAAGTTGTCCATGATTTCC AAGATGGTGTTCTATGGGCGTCTCCGGTGGGTGGTCGAGGCGGCTCCTAC CGTCAGCCCACACAACCGCATCTCGAACGTCATGCACCGGACAGCACGGG GCAAGCTTGCCCCGGAAGGAGATCCTGAGCGCGGGGATGCGGGGGAGCTT TTGCGGGCTCTCGGCGACGGGGCCATCTCCGACCTCAGCTTAAAGACCGT CGACGACCTCAAGAACATCTACAGGCTCTGCTACCCCCCCGGCGGAAAGG GTATCAGCAAGTGAGTCAGAGTCGCCAGCGTACTCGCCCTCCTTTTCGGT TTGTTGCCGCAGGTGCGAGCTTTTTATGTAGCGGTTTGATCACCGCTCCC TAACTGTGTATGTTGTCGAACCTCCATGCTTGGCGCTCCAACGTTCTGCA CAGGTATCCCACGAAGGATCTTCTAATCCAGTGCCTCACGCGGCTCTGGG AGTCCGCGGGGATTGGCGATGGGGACCGTTGCTCCAAGATATTTATCGGC AAACCATCAGGGGCGACCGCAGGAGTCGAAGGTCTCTTTTCGAATGATGG GATCCAGTATGGCGGGGTGTTCCAGGTCGCGCGCGAGAGCGCGGCGGATG CAGTGGATATCCTCGCGCACCGACAGGTGAGGACTTGTTGCTTGCAAGCA TGGCAACAAGGTGTACCTTTCACGAACCAACGGGCAGACGTAGGCACTTT GCCACATGAGGCAGTCCAGTGGGTCGACGACGTTCCGTAACAAGAACAAC CCTTGGTCCCCTTCACACTTTTGCCGGAGCGTTTGTGTGCACTGCTGTCC TGCTCTGTCTTGTGTTTTTTTTTTGTATTCGGAAGGCTTCGTTGTTCGTC AGCTGCGTTGGTTGGAGACTAGTCTGCTGCCTCGGTTTATGCTCAATGAT CAACGCCGAACTTTTATAGAGAATGATACGCAGCAACCAGGCAGTAGAGC CATCTCATGGAGTACTTACGTTTCCCCCACCGTGCTACATGCTGTTCCCG CGTCGTTTATCTTCGATGACAAGGTACAACCATGCCTCTTGATCACGGAT ATCCCGTGCAGGATTGAACCGATTGCCGAGAGGCTTCACGCCGGTCTGCT GCAAGGAGGTGGCGCCCTGCCACGGAACGCCGAAGGCCAAGTTTGCCTGA AAGAATTGCAGCACGTAGGGGCTCGTGCGCACGAGTTTCCGGACCTGCAT GAGGTCAAGGTGCCGCCGAAGGAGTTCCCATCTCCAACCGTGGACTCCGC GTCGGAGGGTGATTGCCTTTTCACCGTGTACATGGCCTTTGCTGCCGGGG AGCCAGCGCCCAGCGTTCAAGCGCACCTGGACTTCCGTGCCCTCCTCCAA CGTGCTGGTGACGTTGTTGAGAGTAATCGTGAGATCCAAGCTGCTGAGAG GGCCGCTGCTGAGGAGGGTGCTAGTGGGGTGAGCGACTGGTCGTCTTCAC CCAAGCGCATCAGCAACGAAGCTGAGACAACGCTCAAGTCGCTGCACAAG AAAGGATGGCATGCAATGACCCTTTTCGAGGTTGTACTGGTGTATTGGTT GTGGTTTGGGGCAGCTGGGTCTGCCGCCCCGGCTGAAGAGGCACAGGGAC CGGCACCGACACCGGTTCCGAGGCCGGCAACGGGGGCGGAACCGGCAGCG GAACCGAGGGCGGAACCGGAGACATCGGGGGTGGACGGGGTGGAGCCGGA GTCGGTACCGGGGATGGGGTCGGAGGCCGGCAGTGGTGGAGACGACACCC CACCACTGCGCAAGATTGCCGACTTGCGGAGGTCGGAGTTTCTCCTCATT GCAATGCATCTCCGGGAAGTTCTGAGGGTAGCGATCGGGGCAACTAGTAG CAGCGACGGCTTGGCCGACATGACGCTGCCTGATTTCGTGGCAGACCACA TTCTCTACGAAAGTCGACCAGAGGCAGGGACTGCAGACAACACCGAG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1347:21413..24159-

>mRNA_L-elsbetiae_contig1347.2667.1 ID=mRNA_L-elsbetiae_contig1347.2667.1|Name=mRNA_L-elsbetiae_contig1347.2667.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3348bp|location=Sequence derived from alignment at L-elsbetiae_contig1347:21413..24159- (Laminarionema elsbetiae ELsaHSoW15)
ATGACGGTTCCCTGTTGCCGCAGCATCGACGACCACAACTTCCACAAGGT
GATCATGGAGGCGTATTTCGCTTTCGAAGCCCTGACAGAGCACGTACACG
ATTTCGTGAGCTACCTCCACGGACGCTATCCGGAGATCCTCTGTATCGAT
GGCTGCGCCAAAATATGTACGGACGACGTTTCGACGGAGCATTTCGAGGT
TGCGCGGGTAGAGAGAGACGTGGACACGGATCTTCAACAGTACTTGCTAA
AGTTGTCCATGATTTCCAAGATGGTGTTCTATGGGCGTCTCCGGTGGGTG
GTCGAGGCGGCTCCTACCGTCAGCCCACACAACCGCATCTCGAACGTCAT
GCACCGGACAGCACGGGGCAAGCTTGCCCCGGAAGGAGATCCTGAGCGCG
GGGATGCGGGGGAGCTTTTGCGGGCTCTCGGCGACGGGGCCATCTCCGAC
CTCAGCTTAAAGACCGTCGACGACCTCAAGAACATCTACAGGCTCTGCTA
CCCCCCCGGCGGAAAGGGTATCAGCAAATGACGGTTCCCTGTTGCCGCAG
CATCGACGACCACAACTTCCACAAGGTGATCATGGAGGCGTATTTCGCTT
TCGAAGCCCTGACAGAGCACGTACACGATTTCGTGAGCTACCTCCACGGA
CGCTATCCGGAGATCCTCTGTATCGATGGCTGCGCCAAAATATGTACGGA
CGACGTTTCGACGGAGCATTTCGAGGTTGCGCGGGTAGAGAGAGACGTGG
ACACGGATCTTCAACAGTACTTGCTAAAGTTGTCCATGATTTCCAAGATG
GTGTTCTATGGGCGTCTCCGGTGGGTGGTCGAGGCGGCTCCTACCGTCAG
CCCACACAACCGCATCTCGAACGTCATGCACCGGACAGCACGGGGCAAGC
TTGCCCCGGAAGGAGATCCTGAGCGCGGGGATGCGGGGGAGCTTTTGCGG
GCTCTCGGCGACGGGGCCATCTCCGACCTCAGCTTAAAGACCGTCGACGA
CCTCAAGAACATCTACAGGCTCTGCTACCCCCCCGGCGGAAAGGGTATCA
GCAAGTATCCCACGAAGGATCTTCTAATCCAGTGCCTCACGCGGCTCTGG
GAGTCCGCGGGGATTGGCGATGGGGACCGTTGCTCCAAGATATTTATCGG
CAAACCATCAGGGGCGACCGCAGGAGTCGAAGGTCTCTTTTCGAATGATG
GGATCCAGTATGGCGGGGTGTTCCAGGTCGCGCGCGAGAGCGCGGCGGAT
GCAGTGGATATCCTCGCGCACCGACAGGTATCCCACGAAGGATCTTCTAA
TCCAGTGCCTCACGCGGCTCTGGGAGTCCGCGGGGATTGGCGATGGGGAC
CGTTGCTCCAAGATATTTATCGGCAAACCATCAGGGGCGACCGCAGGAGT
CGAAGGTCTCTTTTCGAATGATGGGATCCAGTATGGCGGGGTGTTCCAGG
TCGCGCGCGAGAGCGCGGCGGATGCAGTGGATATCCTCGCGCACCGACAG
GTACAACCATGCCTCTTGATCACGGATATCCCGTGCAGGATTGAACCGAT
TGCCGAGAGGCTTCACGCCGGTCTGCTGCAAGGAGGTGGCGCCCTGCCAC
GGAACGCCGAAGGCCAAGTTTGCCTGAAAGAATTGCAGCACGTAGGGGCT
CGTGCGCACGAGTTTCCGGACCTGCATGAGGTCAAGGTGCCGCCGAAGGA
GTTCCCATCTCCAACCGTGGACTCCGCGTCGGAGGGTGATTGCCTTTTCA
CCGTGTACATGGCCTTTGCTGCCGGGGAGCCAGCGCCCAGCGTTCAAGCG
CACCTGGACTTCCGTGCCCTCCTCCAACGTGCTGGTGACGTTGTTGAGAG
TAATCGTGAGATCCAAGCTGCTGAGAGGGCCGCTGCTGAGGAGGGTGCTA
GTGGGGTGAGCGACTGGTCGTCTTCACCCAAGCGCATCAGCAACGAAGCT
GAGACAACGCTCAAGTCGCTGCACAAGAAAGGATGGCATGCAATGACCCT
TTTCGAGGTTGTACTGGTGTATTGGTTGTGGTTTGGGGCAGCTGGGTCTG
CCGCCCCGGCTGAAGAGGCACAGGGACCGGCACCGACACCGGTTCCGAGG
CCGGCAACGGGGGCGGAACCGGCAGCGGAACCGAGGGCGGAACCGGAGAC
ATCGGGGGTGGACGGGGTGGAGCCGGAGTCGGTACCGGGGATGGGGTCGG
AGGCCGGCAGTGGTGGAGACGACACCCCACCACTGCGCAAGATTGCCGAC
TTGCGGAGGTCGGAGTTTCTCCTCATTGCAATGCATCTCCGGGAAGTTCT
GAGGGTAGCGATCGGGGCAACTAGTAGCAGCGACGGCTTGGCCGACATGA
CGCTGCCTGATTTCGTGGCAGACCACATTCTCTACGAAAGTCGACCAGAG
GCAGGGACTGCAGACAACACCGAGGTACAACCATGCCTCTTGATCACGGA
TATCCCGTGCAGGATTGAACCGATTGCCGAGAGGCTTCACGCCGGTCTGC
TGCAAGGAGGTGGCGCCCTGCCACGGAACGCCGAAGGCCAAGTTTGCCTG
AAAGAATTGCAGCACGTAGGGGCTCGTGCGCACGAGTTTCCGGACCTGCA
TGAGGTCAAGGTGCCGCCGAAGGAGTTCCCATCTCCAACCGTGGACTCCG
CGTCGGAGGGTGATTGCCTTTTCACCGTGTACATGGCCTTTGCTGCCGGG
GAGCCAGCGCCCAGCGTTCAAGCGCACCTGGACTTCCGTGCCCTCCTCCA
ACGTGCTGGTGACGTTGTTGAGAGTAATCGTGAGATCCAAGCTGCTGAGA
GGGCCGCTGCTGAGGAGGGTGCTAGTGGGGTGAGCGACTGGTCGTCTTCA
CCCAAGCGCATCAGCAACGAAGCTGAGACAACGCTCAAGTCGCTGCACAA
GAAAGGATGGCATGCAATGACCCTTTTCGAGGTTGTACTGGTGTATTGGT
TGTGGTTTGGGGCAGCTGGGTCTGCCGCCCCGGCTGAAGAGGCACAGGGA
CCGGCACCGACACCGGTTCCGAGGCCGGCAACGGGGGCGGAACCGGCAGC
GGAACCGAGGGCGGAACCGGAGACATCGGGGGTGGACGGGGTGGAGCCGG
AGTCGGTACCGGGGATGGGGTCGGAGGCCGGCAGTGGTGGAGACGACACC
CCACCACTGCGCAAGATTGCCGACTTGCGGAGGTCGGAGTTTCTCCTCAT
TGCAATGCATCTCCGGGAAGTTCTGAGGGTAGCGATCGGGGCAACTAGTA
GCAGCGACGGCTTGGCCGACATGACGCTGCCTGATTTCGTGGCAGACCAC
ATTCTCTACGAAAGTCGACCAGAGGCAGGGACTGCAGACAACACCGAG
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