mRNA_L-elsbetiae_contig1347.2666.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: A0A6H5JL33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL33_9PHAE) HSP 1 Score: 103 bits (257), Expect = 3.090e-21 Identity = 130/208 (62.50%), Postives = 146/208 (70.19%), Query Frame = 3 Query: 12 GLTPLMLAASKGRSRVARILLNKGADLSIPGEDGNTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELL-RAKANPLPVRTKRSGGTNVPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDTGIALRSRVG 632 G TPLMLAA +G SRV RILLNKGA++S+ EDG+TALH XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAKANPL + SG T VPLD AAE G ++VVRELI+Q I GC GASGGV AL AA +VD+M++L +AGV+DTG AL + G Sbjct: 50 GWTPLMLAAWRGSSRVVRILLNKGANVSVVAEDGHTALHFSTQDGGHPVVTXXXXXXXXXXXXXXXXXXXXXXLAANAGCWEVAQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTPSGVTFVPLDTAAEYGQTEVVRELIKQVSIKGCGGASGGVYALRLAALSQNVDVMSVLADAGVMDTGEALITAAG 257
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: D8LNF8_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNF8_ECTSI) HSP 1 Score: 99.4 bits (246), Expect = 1.510e-20 Identity = 107/208 (51.44%), Postives = 124/208 (59.62%), Query Frame = 3 Query: 12 GLTPLMLAASKGRSRVARILLNKGADLSIPGEDGNTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELL-RAKANPLPVRTKRSGGTNVPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDTGIALRSRVG 632 G TPLMLAA +G SRV RIL NKGA++S+ +D +TALH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RAKANPL + SG T VPLD AAE G ++VV+EL+QQ I GC GASGGVDAL AA +VD+MA+L + GV+DTG AL + G Sbjct: 50 GWTPLMLAAWRGSSRVVRILPNKGANVSVVADDFHTALHFSTQDGGHPVVTKMLLKAGADFEAVTSEGETPLHLVADSGCWEVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAKANPLLTKPTSSGVTFVPLDTAAEYGQTEVVQELVQQVSIKGCGGASGGVDALRLAALSQNVDVMAVLADVGVMDTGEALITAAG 257
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI) HSP 1 Score: 99.0 bits (245), Expect = 2.490e-19 Identity = 87/211 (41.23%), Postives = 107/211 (50.71%), Query Frame = 3 Query: 12 GLTPLMLAASKGRSRVARILLNKGADLSIPGEDGNTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VRELLRAKANPLPVRTKRSGGTN-VPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDTGIALRSRVGL 635 G TPLM+A G SR+A++L+ KGA++SI + G TALH XXXXXXXXXXXXX +RELLR ANPL ++T G T VPLD+AA+ G++ VVRELIQ+ GI+GC S G ALA AA H+DIMA+L AGVVDTG AL G+ Sbjct: 139 GATPLMMAVHNGHSRIAKMLIKKGANVSIADKRGFTALHFCCAREEDDAIVKLLAKAGADLDAIIPGEGSAPLHRATHHEXXXXXXXXXXXXXNPDCQLPDGSTALHIAAEEGQVAVMRELLRGNANPLLIQTSPPGNTTTVPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASNQHLDIMAILTEAGVVDTGKALYLAAGM 349
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: D8LSC5_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSC5_ECTSI) HSP 1 Score: 85.1 bits (209), Expect = 1.210e-15 Identity = 56/121 (46.28%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 622 AGWGSEAAVKFLLQQQRQRESSPTGLVGYVNFRDQTRITPLFCSTVIGDATIDTPLLVSPRVRVVRRLVEAGADTTLAFRAANEAGGVSNLGAPLAYTNKCLRDKKVGGKDATEEQLYRLE 984 AG G EA+V+FLL+Q+R+ S + Y N D + +TPL CS I + P R+VR LV+AGADTT R N GGV PLA T LR+K V GK ATEEQL+RL+ Sbjct: 28 AGLGREASVQFLLRQRRKE--SEMSVHAYANSSDGSGMTPLSCS--IEWCSSGNP-------RIVRLLVDAGADTTSTVRVTNLNGGVEYNDTPLAVTTSLLREKVVDGKPATEEQLHRLQ 137
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 9.440e-15 Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = 3 Query: 360 RELLRAKANPLPVRTKR-SGGTNVPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDTGIAL 617 R LL AKA+PL SG T +PLD AAE G+ +VV ELI+Q GIDGC G+SGGV AL AA+ +++IM +L NAGVVDTG+AL Sbjct: 165 RLLLLAKADPLLTTVPDPSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKNLNIMVILTNAGVVDTGLAL 251
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: A0A6H5JTV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTV7_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 3.360e-14 Identity = 42/67 (62.69%), Postives = 53/67 (79.10%), Query Frame = 3 Query: 408 RSGGTNVPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDTG 608 R+G + +PL+ AAE GN +V EL+Q FGI+GC G SGGV ALA AAE GHV I+A+L++AGVVDTG Sbjct: 124 RNGKSVLPLEDAAEHGNLDIVHELVQLFGIEGCGGPSGGVGALANAAEFGHVGIVALLLDAGVVDTG 190
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 3.710e-14 Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 369 LRAKANPLPVRTKRSGGTN-VPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVD-TGIALRSRVG 632 L AKANPL + S G + VPL+VAA+ G S VV EL+++FGI C G SGG+DAL AA G VDIM+ML++AGVVD G+AL + VG Sbjct: 138 LHAKANPLLTWSSESSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQVDIMSMLMDAGVVDPVGLALLAAVG 227
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: D7FWJ9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ9_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 4.120e-14 Identity = 50/96 (52.08%), Postives = 61/96 (63.54%), Query Frame = 3 Query: 357 VRELLRAKANPL---PVRTKRSGGTNVPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDT-GIALRSRVG 632 +RELLR KANPL G + PLD+AA+ G+S +VREL++Q GI+GC GG AL AA HVDIMA+L AGVVDT G+AL G Sbjct: 90 LRELLRLKANPLLEFEPPPSSVGCGSAPLDIAAQNGHSDIVRELVEQLGIEGCDPKKGGEPALHVAASDQHVDIMAILTGAGVVDTTGLALIGAAG 185
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: D8LL76_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL76_ECTSI) HSP 1 Score: 83.2 bits (204), Expect = 4.130e-14 Identity = 143/209 (68.42%), Postives = 157/209 (75.12%), Query Frame = 3 Query: 3 DPQGLTPLMLAASKGRSRVARILLNKGADLSIPGEDGNTALHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRELLRAKANPLPVRTKRSGGTNVPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDTGIALRSRV 629 DP+G TPLM AA +G S V ++LLN+GA L +D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PL SG T VPLD AA G+ V REL+Q+FGI GCAGAS GVDAL AA H+D+MA+L +AGVVDTG AL + V Sbjct: 42 DPRGWTPLMFAAEEGHSNVIKVLLNRGASLLPVDDDDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLLPTRMSSGNTFVPLDGAALNGHLAVARELVQRFGIRGCAGASAGVDALGQAAVDQHLDVMALLCDAGVVDTGNALVATV 250
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Match: A0A6H5JFP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP0_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 8.770e-14 Identity = 48/92 (52.17%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 357 VRELLRAKANPL-PVRTKRSGGTNVPLDVAAEGGNSKVVRELIQQFGIDGCAGASGGVDALAAAAERGHVDIMAMLINAGVVDTGIALRSRV 629 V+ LLR KA+ L P + + +PLDVAA G+ VVREL+QQ G+ GC G SGG DAL A G +DIMA L++AGVVD G LRS + Sbjct: 197 VKVLLRFKADALLPAQFENRKDKWLPLDVAAHRGHLAVVRELVQQVGLGGCGGPSGGADALVITASEGRLDIMAFLLDAGVVDNGDGLRSAI 288 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1347.2666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1347.2666.1 >prot_L-elsbetiae_contig1347.2666.1 ID=prot_L-elsbetiae_contig1347.2666.1|Name=mRNA_L-elsbetiae_contig1347.2666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=204bp MLAASKGRSRVARILLNKGADLSIPGEDGNTALHVSALSGQLGMTVDLVQback to top mRNA from alignment at L-elsbetiae_contig1347:13437..14421+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1347.2666.1 ID=mRNA_L-elsbetiae_contig1347.2666.1|Name=mRNA_L-elsbetiae_contig1347.2666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=985bp|location=Sequence derived from alignment at L-elsbetiae_contig1347:13437..14421+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1347:13437..14421+ >mRNA_L-elsbetiae_contig1347.2666.1 ID=mRNA_L-elsbetiae_contig1347.2666.1|Name=mRNA_L-elsbetiae_contig1347.2666.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1224bp|location=Sequence derived from alignment at L-elsbetiae_contig1347:13437..14421+ (Laminarionema elsbetiae ELsaHSoW15)back to top |