mRNA_L-elsbetiae_contig13450.2654.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13450.2654.1
Unique NamemRNA_L-elsbetiae_contig13450.2654.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: A0A836CL36_9STRA (Katanin like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL36_9STRA)

HSP 1 Score: 198 bits (504), Expect = 7.620e-59
Identity = 117/166 (70.48%), Postives = 128/166 (77.11%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            MDN F+PKAI TV +AI  DN Q+YE AL LY+K+L+YFMTGLKYE NP  K TIM RVEGYM+RAE L+ I+ +QAEAK      XXXXXXXXXXXX             KLRGALA A+VSEKPNVKWDDVAGLE AKS LKEAVILPARFPQLFTGKRRPWKG
Sbjct:    1 MDNSFLPKAISTVTEAIAADNAQEYEQALALYRKALEYFMTGLKYEKNPATKQTIMDRVEGYMKRAELLRGILDKQAEAKXXXXXXXXXXXXXXXXXXSDAKDTGIDEEKKKLRGALAGAVVSEKPNVKWDDVAGLEAAKSALKEAVILPARFPQLFTGKRRPWKG 166
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: A0A397F2K9_9STRA (MIT domain-containing protein (Fragment) n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397F2K9_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.480e-55
Identity = 98/166 (59.04%), Postives = 114/166 (68.67%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            MDN+FIP+AI  V  AI  D N++YE A  LY++SL++FM G+KYE NP +KA IMKRVEGYM RAE L++++  QA+ K     G                         KLRGALASA+VSEKPNVKWDDVAGLE AK  LKEAVILPARFPQLFTGKRRPWKG
Sbjct:    1 MDNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYQQSLEHFMIGVKYEKNPTSKAIIMKRVEGYMTRAEQLRELLEGQAKPKVVAAGGTAEKEKDDEETDGDAEKN-------KLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKG 159
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: A0A024TRV6_9STRA (Uncharacterized protein n=12 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRV6_9STRA)

HSP 1 Score: 181 bits (460), Expect = 3.030e-52
Identity = 109/166 (65.66%), Postives = 124/166 (74.70%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            MDN+FIP+AI  V  AI  D N++YE A  LYK+SL++FM G+KYE NP +K  IMKRVEGYM RAE L++++  QA+ K     G    XXXXXXXXXXX          KLRGALASA+VSEKPNVKWDDVAGLE AK  LKEAVILPARFPQLFTGKRRPWKG
Sbjct:    1 MDNKFIPQAIQLVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMTRAEQLREMLEGQAKPKVVAAGGTAEKXXXXXXXXXXXEKN-------KLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKG 159
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: T0S697_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S697_SAPDV)

HSP 1 Score: 177 bits (449), Expect = 2.240e-51
Identity = 96/166 (57.83%), Postives = 112/166 (67.47%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            MDN+FIP+AI  V  AI  D N++YE A  LYK+SL++FM G+KYE NP +K  IMKRVEGYM RAE L++++   ++ K     G                         KLRGALASA+VSEKPNVKWDDVAGLE AK  LKEAVILPARFPQLFTGKRRPWKG
Sbjct:    1 MDNKFIPQAIALVTQAIQEDTNKNYEAAFKLYKQSLEHFMIGVKYEKNPTSKEIIMKRVEGYMSRAEQLREMLEGASKPKVVPAGGVAEKEKDDEENEDAEKN--------KLRGALASAVVSEKPNVKWDDVAGLEAAKEALKEAVILPARFPQLFTGKRRPWKG 158
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: A0A2D4C4G0_PYTIN (Vacuolar protein sortingassociating protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C4G0_PYTIN)

HSP 1 Score: 176 bits (446), Expect = 3.560e-50
Identity = 93/166 (56.02%), Postives = 113/166 (68.07%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            M+N+FIP+AI+ V  AI  DN ++YE ALGLYKK+L++FM G+KYE NP +K  IMKRVEGYM RAE L+ ++ +  +A    G                           KLRG+LAS++V EKPNVKWDDVAGL+ AK  LKEAVILPARFPQLFTGKRRPWKG
Sbjct:    1 MENKFIPQAIEIVTLAIQEDNKKNYEEALGLYKKALEHFMIGVKYEKNPTSKDIIMKRVEGYMTRAEQLRAMLEKTPKAVTASGTAELEKGDKSDDDETDVETA-------KLRGSLASSVVGEKPNVKWDDVAGLDAAKEALKEAVILPARFPQLFTGKRRPWKG 159
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: W2RG29_PHYPN (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=W2RG29_PHYPN)

HSP 1 Score: 174 bits (440), Expect = 3.620e-50
Identity = 94/171 (54.97%), Postives = 116/171 (67.84%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKN-----GMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            M+N+FIP+AI+ V +AI  DN+++Y+ A  LYKK+L++FM G+KYE NP +K  IMKRVEGYM RAE L+ ++ ++   K       M KG                         KLRG+LASA+VSEKPNVKWDDVAGL+ AK  LKEAVILPARFPQLFTGKRRPWKG
Sbjct:    1 MENRFIPQAIEIVTEAIKEDNSKNYQEAFRLYKKALEHFMIGVKYEKNPTSKEIIMKRVEGYMTRAEQLRGMLEKETAPKPVAAVVDMDKGDKEDDDETDAETA------------KLRGSLASAVVSEKPNVKWDDVAGLDAAKEALKEAVILPARFPQLFTGKRRPWKG 159
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: A0A812MZQ9_SYMMI (VPS4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812MZQ9_SYMMI)

HSP 1 Score: 173 bits (439), Expect = 1.470e-49
Identity = 92/166 (55.42%), Postives = 110/166 (66.27%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            M+NQFI +A++ V  AI  DN  +Y+ AL LY+KSLDYFMTGLKYE NP A+  +M++VEGYM+RAE LK  +     A N  GK                          K+RGAL+SAIVSEKP+VKW DVAGLE AK  LKEAV+LP RFPQLFTGKR+PWKG
Sbjct:    1 MNNQFITQAVEIVTQAITADNEGEYDKALTLYRKSLDYFMTGLKYEKNPAARERVMEKVEGYMQRAEFLKNSL-----ADNKSGKTSGSAGGAATVSKDQEGKQKDDDETCKMRGALSSAIVSEKPDVKWSDVAGLEMAKDALKEAVVLPVRFPQLFTGKRKPWKG 161
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: W2RI57_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2RI57_PHYPN)

HSP 1 Score: 174 bits (440), Expect = 3.530e-49
Identity = 94/171 (54.97%), Postives = 116/171 (67.84%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKN-----GMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            M+N+FIP+AI+ V +AI  DN+++Y+ A  LYKK+L++FM G+KYE NP +K  IMKRVEGYM RAE L+ ++ ++   K       M KG                         KLRG+LASA+VSEKPNVKWDDVAGL+ AK  LKEAVILPARFPQLFTGKRRPWKG
Sbjct:    1 MENRFIPQAIEIVTEAIKEDNSKNYQEAFRLYKKALEHFMIGVKYEKNPTSKEIIMKRVEGYMTRAEQLRGMLEKETAPKPVAAVVDMDKGDKEDDDETDAETA------------KLRGSLASAVVSEKPNVKWDDVAGLDAAKEALKEAVILPARFPQLFTGKRRPWKG 159
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: A0A3F2S1C1_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1C1_9STRA)

HSP 1 Score: 173 bits (438), Expect = 7.090e-49
Identity = 92/166 (55.42%), Postives = 112/166 (67.47%), Query Frame = 1 
Query:    1 MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            M+N+FIP+AID V  AI+ DN ++Y+ A  LYKK+L++FM G+KYE NP +K  IMKRVEGYM RAE L+ ++ ++   K                               KLRG+LASA+VSEKPNVKWDDVAGL+ AK  LKEAVILPARFPQLFTGKRRPWKG
Sbjct:   30 MENKFIPQAIDIVTSAINEDNAKNYQEAFRLYKKALEHFMVGVKYEKNPTSKEIIMKRVEGYMTRAEQLRGMLEKEHAPK-------PVAAAVDLDKGDKEDDDETDAETAKLRGSLASAVVSEKPNVKWDDVAGLDAAKEALKEAVILPARFPQLFTGKRRPWKG 188
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BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Match: A0A7S2F3D5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3D5_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.030e-48
Identity = 90/164 (54.88%), Postives = 105/164 (64.02%), Query Frame = 1 
Query:    7 NQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPMAKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGXXXXXXXXXXXXXXXXXXXXXXXXXKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILPARFPQLFTGKRRPWKG 498
            N FI + I+ V  AI+ DN QDYE AL  Y+KSL+YFMTGLK+E N   K TI+ RVEGYM+RAE LK ++ EQ +  +  G G                         KL G L+SAIV+EKPNV+W DVAGLE AK  LKEAVILP RFPQLF GKRRPWKG
Sbjct:    8 NTFIKQGIEIVTQAIEADNAQDYESALAKYRKSLEYFMTGLKHEKNKSVKDTILNRVEGYMQRAEVLKGVIDEQRQGPSKKGDGSSGGAASLSKKDGDTGKEHNDEMD-KLAGQLSSAIVTEKPNVQWSDVAGLEGAKEALKEAVILPRRFPQLFVGKRRPWKG 170
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13450.2654.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CL36_9STRA7.620e-5970.48Katanin like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A397F2K9_9STRA1.480e-5559.04MIT domain-containing protein (Fragment) n=2 Tax=A... [more]
A0A024TRV6_9STRA3.030e-5265.66Uncharacterized protein n=12 Tax=Saprolegniaceae T... [more]
T0S697_SAPDV2.240e-5157.83Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A2D4C4G0_PYTIN3.560e-5056.02Vacuolar protein sortingassociating protein putati... [more]
W2RG29_PHYPN3.620e-5054.97Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A812MZQ9_SYMMI1.470e-4955.42VPS4 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
W2RI57_PHYPN3.530e-4954.97Uncharacterized protein n=1 Tax=Phytophthora paras... [more]
A0A3F2S1C1_9STRA7.090e-4955.42Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A7S2F3D5_9STRA1.030e-4854.88Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13450contigL-elsbetiae_contig13450:300..4301 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score235.0
Seed ortholog evalue2.6e-59
Seed eggNOG ortholog2880.D7FR02
Preferred nameVPS4B
KEGG koko:K12196
KEGG Pathwayko04144,ko04217,map04144,map04217
KEGG ModuleM00412
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000075,GO:0000166,GO:0000278,GO:0000280,GO:0000323,GO:0000819,GO:0000902,GO:0000904,GO:0000910,GO:0000916,GO:0000920,GO:0000922,GO:0001654,GO:0001745,GO:0001751,GO:0001754,GO:0002790,GO:0003002,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005764,GO:0005768,GO:0005769,GO:0005770,GO:0005771,GO:0005773,GO:0005774,GO:0005783,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005886,GO:0005911,GO:0006508,GO:0006511,GO:0006605,GO:0006622,GO:0006623,GO:0006629,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0006869,GO:0006886,GO:0006900,GO:0006906,GO:0006914,GO:0006996,GO:0006997,GO:0006998,GO:0007010,GO:0007032,GO:0007033,GO:0007034,GO:0007041,GO:0007049,GO:0007059,GO:0007080,GO:0007088,GO:0007093,GO:0007163,GO:0007275,GO:0007346,GO:0007389,GO:0007399,GO:0007423,GO:0007610,GO:0007638,GO:0008022,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008202,GO:0008333,GO:0008593,GO:0009056,GO:0009057,GO:0009306,GO:0009405,GO:0009506,GO:0009605,GO:0009612,GO:0009628,GO:0009653,GO:0009838,GO:0009887,GO:0009888,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010008,GO:0010026,GO:0010033,GO:0010035,GO:0010038,GO:0010090,GO:0010091,GO:0010226,GO:0010256,GO:0010389,GO:0010564,GO:0010638,GO:0010646,GO:0010647,GO:0010648,GO:0010824,GO:0010825,GO:0010876,GO:0010941,GO:0010948,GO:0010971,GO:0010972,GO:0012505,GO:0015031,GO:0015630,GO:0015672,GO:0015833,GO:0015850,GO:0015918,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016125,GO:0016192,GO:0016197,GO:0016236,GO:0016322,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017048,GO:0017076,GO:0017111,GO:0017157,GO:0019058,GO:0019068,GO:0019076,GO:0019538,GO:0019899,GO:0019904,GO:0019941,GO:0021700,GO:0022008,GO:0022402,GO:0022411,GO:0022607,GO:0023051,GO:0023056,GO:0023057,GO:0030001,GO:0030029,GO:0030036,GO:0030054,GO:0030154,GO:0030163,GO:0030182,GO:0030301,GO:0030447,GO:0030448,GO:0030496,GO:0030554,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031267,GO:0031410,GO:0031468,GO:0031982,GO:0032365,GO:0032366,GO:0032367,GO:0032465,GO:0032466,GO:0032501,GO:0032502,GO:0032506,GO:0032507,GO:0032509,GO:0032510,GO:0032511,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032880,GO:0032886,GO:0032940,GO:0032984,GO:0032989,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033993,GO:0034058,GO:0034067,GO:0034613,GO:0035088,GO:0035418,GO:0035639,GO:0035890,GO:0035891,GO:0036094,GO:0036213,GO:0036257,GO:0036258,GO:0036452,GO:0039702,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0042051,GO:0042058,GO:0042221,GO:0042461,GO:0042462,GO:0042551,GO:0042592,GO:0042623,GO:0042802,GO:0042803,GO:0042886,GO:0043162,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043328,GO:0043624,GO:0043632,GO:0043900,GO:0043901,GO:0043902,GO:0043903,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044126,GO:0044130,GO:0044144,GO:0044146,GO:0044182,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044837,GO:0044878,GO:0045053,GO:0045184,GO:0045185,GO:0045197,GO:0045324,GO:0045463,GO:0045465,GO:0045470,GO:0045742,GO:0045746,GO:0045786,GO:0045787,GO:0045920,GO:0045921,GO:0045926,GO:0045930,GO:0045931,GO:0046530,GO:0046599,GO:0046601,GO:0046605,GO:0046607,GO:0046755,GO:0046903,GO:0046907,GO:0046983,GO:0048284,GO:0048285,GO:0048468,GO:0048469,GO:0048471,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048524,GO:0048583,GO:0048584,GO:0048585,GO:0048592,GO:0048666,GO:0048699,GO:0048731,GO:0048749,GO:0048856,GO:0048869,GO:0048878,GO:0050000,GO:0050789,GO:0050792,GO:0050794,GO:0050801,GO:0050896,GO:0051020,GO:0051046,GO:0051047,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051235,GO:0051259,GO:0051260,GO:0051261,GO:0051276,GO:0051301,GO:0051302,GO:0051303,GO:0051310,GO:0051493,GO:0051495,GO:0051603,GO:0051640,GO:0051641,GO:0051649,GO:0051651,GO:0051656,GO:0051701,GO:0051704,GO:0051716,GO:0051726,GO:0051782,GO:0051783,GO:0052126,GO:0052192,GO:0055044,GO:0055065,GO:0055067,GO:0055075,GO:0055078,GO:0055080,GO:0060236,GO:0060341,GO:0060548,GO:0060627,GO:0061024,GO:0061025,GO:0061245,GO:0061462,GO:0061640,GO:0061738,GO:0061919,GO:0065003,GO:0065007,GO:0065008,GO:0070507,GO:0070676,GO:0070727,GO:0070887,GO:0070925,GO:0071241,GO:0071248,GO:0071285,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072319,GO:0072594,GO:0072657,GO:0072665,GO:0072666,GO:0090068,GO:0090169,GO:0090174,GO:0090224,GO:0090543,GO:0090558,GO:0090596,GO:0090611,GO:0090626,GO:0097159,GO:0097352,GO:0097367,GO:0097708,GO:0098588,GO:0098771,GO:0098796,GO:0098805,GO:0098813,GO:0140014,GO:1901184,GO:1901186,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901615,GO:1901673,GO:1901987,GO:1901988,GO:1901989,GO:1901990,GO:1901991,GO:1901992,GO:1902115,GO:1902117,GO:1902186,GO:1902188,GO:1902494,GO:1902749,GO:1902750,GO:1902751,GO:1903047,GO:1903076,GO:1903530,GO:1903531,GO:1903532,GO:1903539,GO:1903541,GO:1903542,GO:1903543,GO:1903722,GO:1903724,GO:1903772,GO:1903774,GO:1903827,GO:1903900,GO:1903902,GO:1904375,GO:1904896,GO:1904903,GO:1904949,GO:1905475,GO:1990621,GO:1990778
EggNOG free text desc.positive regulation of centriole elongation
EggNOG OGsKOG0739@1,KOG0739@2759
Ec32 ortholog descriptionputative; katanin like protein
Ec32 orthologEc-09_003060.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131
Exons3
Model size498
Cds size498
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13450.2654.1prot_L-elsbetiae_contig13450.2654.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13450 300..4301 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815517.3082695-CDS-L-elsbetiae_contig13450:299..4461622815517.3082695-CDS-L-elsbetiae_contig13450:299..446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13450 300..446 +
1691682936.633352-CDS-L-elsbetiae_contig13450:299..4461691682936.633352-CDS-L-elsbetiae_contig13450:299..446Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13450 300..446 +
1622815517.3179758-CDS-L-elsbetiae_contig13450:2086..22081622815517.3179758-CDS-L-elsbetiae_contig13450:2086..2208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13450 2087..2208 +
1691682936.6459086-CDS-L-elsbetiae_contig13450:2086..22081691682936.6459086-CDS-L-elsbetiae_contig13450:2086..2208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13450 2087..2208 +
1622815517.3298523-CDS-L-elsbetiae_contig13450:4072..43011622815517.3298523-CDS-L-elsbetiae_contig13450:4072..4301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13450 4073..4301 +
1691682936.6543941-CDS-L-elsbetiae_contig13450:4072..43011691682936.6543941-CDS-L-elsbetiae_contig13450:4072..4301Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13450 4073..4301 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13450.2654.1

>prot_L-elsbetiae_contig13450.2654.1 ID=prot_L-elsbetiae_contig13450.2654.1|Name=mRNA_L-elsbetiae_contig13450.2654.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=166bp
MDNQFIPKAIDTVKDAIDHDNNQDYEVALGLYKKSLDYFMTGLKYETNPM
AKATIMKRVEGYMERAETLKKIVVEQAEAKNGMGKGGGAGGAATASAADK
KKDEGGDEEQKKLRGALASAIVSEKPNVKWDDVAGLEQAKSTLKEAVILP
ARFPQLFTGKRRPWKG
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mRNA from alignment at L-elsbetiae_contig13450:300..4301+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13450.2654.1 ID=mRNA_L-elsbetiae_contig13450.2654.1|Name=mRNA_L-elsbetiae_contig13450.2654.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4002bp|location=Sequence derived from alignment at L-elsbetiae_contig13450:300..4301+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATAACCAGTTCATTCCGAAGGCGATTGACACGGTCAAGGATGCCAT
CGATCACGACAACAACCAGGACTACGAGGTAGCCTTGGGCCTCTACAAGA
AGTCGCTAGATTACTTCATGACTGGGCTGAAGTACGAGACTAATCCGGTG
AGGCTTCTTGCCTCTGTTGTACATAAATCTAGTCTAGCCGACCGAGGCAG
ACAGCAAGGATAGAGGGGATAAGCAGCCCGGGCATTCGGCCAACTCTCGC
TGCGTGGATCTAGTGTAGACTAGCAACTGTTGCTCACGCTTTCATCTCAG
CCTTGTTGCGCTGAGAAGGTATATTGGCAGATATAGATAACAGAGTAGCG
GTAGTATATGTACGTATTTAGTCTGACAATAGTCGAACCTCGGCTCTCTC
TCACCTGCACACCGACACCGCCGACACTCCCAAAATCATGCCACGTCTTT
GGAGGGGGGGGCGTGGACAGAGGGCTGTGCTAGAGAAAATGTGTGTGAGA
GAGAGATTCATCTCCAGATTGCTCTCCAGTTTCGGCAGCGGCAGCGCCAT
TCTATGTACATGTAGTCTAGCCCTCTTGCGTGTTCGCTCGCACACCGCCG
TTGCAAACGAAATGGAAATGCTCAGCCCTTGTCATAGAGATAGCAGCATT
CCAGCATCCTGCACGCGCACACGCAACACAGTAGATGAGGGAGTGCAGCC
GGTAGGTAATGGACCCAACTCAATATTTTTCGCACAAGGCCCAAAAGGAA
AGCCTCGGGCGGTGCGCCCTCACAGATTGGCAAGCGTTGATTTCTGTCAC
ATTTATGCGACCCCTTTCTCCTCTAAGTTTCCTGAACGTGGGGAGCTACA
CGCGACGTATGTCCCTTATGTATGTGTCCGCTTTGTAAGTATGTTTGTGC
ACCAGTTAGCATCGAAGGGCGCCTAGGGTATAGAGTCACGGAGCGGCACC
TACAATAGGTATGCCATGTATCTCGGGCGGAGAGCTGGCAACACCCTCGG
GGCGAGTTTGGCGCCTCGCGCGTAGTTAGTTGTACAAGGTGTGCGTGTGC
GTGTGCATGTACCTTTACACTCTGCATACATGCACCTCGAAGTGGACCAA
TGAGCCGGATGCTGTGGTGTCGGAAAGCGGCTCATGCCCTCTCTTGTCAA
ACGCTCCAGCACAAATGTGGCGTGTTTGGGGGGGGGGGCTGGTATCCTGC
ATCATGAAATAGCGCTAGATGCATACACGTGGAGGTAGAGCAGCAGTACC
TTGGTTCTCATGTTTGTGCTAGTATTATCATTTCCTCCGTGTGATCGCTG
CTGCTGCACTGTTGCCGCACTGCTGCGGCGTTGTCAAAATAGTTCGGGCG
GCGAAGACGCCGCGCACGAGGCGAGTTTTGTATATTTGTCCGAATATTCG
ACGGTTTATACCTACCTAGATGACCACGGGAATCGACCGCGTTAGTGTTG
GATTAGTATGGACTCATGGAGGTGTACTGGATAGAGAGATTGGAACGGTC
TCTAATGTGAAGACAAAAACAACAACAACAACAACAACAACAACAACAGA
TGCACGAGCCCGTGTAGGGCATGATACAAGGCGCAGCAGCAGCAGCAGCA
GCAGCACCCACCCGTGGCCGGGTTTCGCGACAAGCCTCCCGCGTGTCGTC
GCGCGTCGTTCGACTACCGTTGCTTCGCCTTCCTCTCGTTCTCTCTTTCT
CTTTCTCTCTCTCTCTTACTCCTCGCTGAACCCTCCCTCTCTGTTATATC
TCCGCCTTCCACGTCTTGCTCCCCTCCCGCACCGCAGATGGCCAAGGCCA
CGATCATGAAGCGAGTAGAGGGCTACATGGAGAGGGCGGAGACTTTGAAG
AAGATTGTGGTCGAACAGGCCGAAGCCAAGAACGGCATGGGCAAAGGTGG
CGGGGCCGGGTGAGTGAGCGATACATGAAAGCGATTTCGTAAGTAGATAT
TATGTCGACTTCATTGTTGACGAGGAGTGCTGAACCCTGCTCGCGATAAA
AACATTCAAGGAAGGCACCGCAGAAGGGGGTCCAGCTCCCCCTCCCGTGT
GACCCCGGTTGGGTGGTCTAGCTAGTCGTAGTGGAGGAAGGGGGCCAGTG
GGGCAGACGACAAATATGCCAACGACATGCTGAATAAACAAAAAAAAACT
ACACAGCACGTCAGCATGTCTACGCCCAGCCTGTAAACGTGGTTGTTTTT
CAGAGGGGAGTGTTGCGGGCACAGCGCTTTTATGCCCGTCCTCACTGCCC
CCCCCCCCCCCCCCCCCCCCCCTCTACACCCGGCTCGCCCACAAAACCCC
ACCGCCCCCCNNNNNNNNNNGAGTGTTGCGGGCACGGCGTCTTTATGCCC
GTCCCCCCTGCCCCCCCCCCCTCCCCGAGCTATGTATACCGTAGATGACA
CAAAAAACCACCCCCCCCCCTCTCCCCCTCTCCCCTCGGTGATACATTTG
GGCGCTTGGAAATATTTTCACCGGAGGTGGTTTTCTGCGAGGGGCGGGTG
TTATCTTCGGTACCCGTGGTATCTTGTGTCATCTACGGTAACGACACACC
AGCCTTCCGGTTGTAGTGTATTGCTGTATTCGTGTTGTGTTGTTGGGTAA
ATACACGATTTTACGTGAAAAAAATGAAGAAACGTACTTCTAGGTACGCA
CGTCGTGGGACGGTACCACGACAACAGCAGGAACCCTCGGTGTATGTGAG
GTGTACGCAAGTAAACGGAGTTCTATATCATTGACCGCGAGAGAGGGAGG
GGCGTGTGATGAGCCTTGTTTACCCTCCCACTGCAATTGGCTTGTGCTTT
GTTTGCTTTCGGCGGGCGGAATCGCGACGATGCACCTCGCAGCTTTGCTC
CGAAGTACATATAGTAGTGGTTAAACAAAAAAAAACACACACACACACAC
ACACACAGAAGACAGCCACGCCTTGGCCCTTGTTGTCGTTCCGTGCGGAG
GCACCGTGAATGTTTCCTGGGGTTTGAACAAGACAAGGGGGGGGGGGGTA
GTCCACGTACATAGCTCGGTTCGAGTTTCTGTGCTCCTGTCGCGAAGACG
TCTTGCGGACACCAAGCACCCGGGACTCGTCCGCTAAATACTCTGTACCT
GCCCGGCGTTGCGGCGCTGCAGGTGCACGGTGATGTGATGTTTTCGGCGC
GCACGGTGGGCACAGCAGGCAGGGCAAGGGAGGAAAGAACGGCAGCGGTT
TTTTAAACAGGAGTCTCGGGTCTCGGGGAGGGATAAAACAGCTGATCGCT
CGCGTTGGACGGGATATTCCGACAAACCCACACCCCACCCCACCCCACCT
CTACACGGGATTTTGTTTTTCCGTTTCTCTGTTCCGCTGTGCTACTGACA
CTGGCGTGGCGCCGTTTCATCTCAGCCGGCTCGGCGCGGTCCGTCGGTCC
TAACGTCCTTGATTGCGACTCAAACAAGAGAAGAGAAGAGGTCCGACAAG
CACACACCCAACTACTATACCTCCCTCCCTCGCACGTACCTACGTATGTA
TGTATGTATGTAGCTCATTCTTCCCTTGCGTGTCAACGCAGAAGGGCGTG
GTGGACGGCCAACCACCAACCAAGCCTAGCGCGCGCACGAAGTACCTACC
ACCCTCGACGTCCCCCCCCCCCCCCCCCCCCCCCCCCCCGGTCCCCTCCG
GTTTTTGTAGCCCCGTGTTTGTCTTTTTTTTTGGGGCGGGGGCTCACCGC
CCCGTGTCCCTTCGGCTTTGCTGACCCTGCTGTCTGTCTTCTGTCTGCGG
ACGGGGCTCGTCGCTTTTCGCAGGGGCGCGGCGACAGCTTCCGCGGCGGA
CAAGAAGAAGGACGAGGGGGGCGACGAGGAGCAGAAGAAGCTGCGGGGCG
CCCTCGCGTCGGCGATCGTCTCGGAGAAGCCCAACGTGAAGTGGGACGAC
GTTGCGGGGCTGGAGCAGGCGAAGAGCACGCTCAAGGAGGCGGTCATCCT
GCCGGCTAGGTTTCCGCAGCTCTTCACGGGGAAGCGAAGGCCGTGGAAGG
GT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13450:300..4301+

>mRNA_L-elsbetiae_contig13450.2654.1 ID=mRNA_L-elsbetiae_contig13450.2654.1|Name=mRNA_L-elsbetiae_contig13450.2654.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=996bp|location=Sequence derived from alignment at L-elsbetiae_contig13450:300..4301+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGATAACCAGTTCATTCCGAAGGCGATTGACACGGTCAAGGATGCCAT
CGATCACGACAACAACCAGGACTACGAGGTAGCCTTGGGCCTCTACAAGA
AGTCGCTAGATTACTTCATGACTGGGCTGAAGTACGAGACTAATCCGATG
GATAACCAGTTCATTCCGAAGGCGATTGACACGGTCAAGGATGCCATCGA
TCACGACAACAACCAGGACTACGAGGTAGCCTTGGGCCTCTACAAGAAGT
CGCTAGATTACTTCATGACTGGGCTGAAGTACGAGACTAATCCGATGGCC
AAGGCCACGATCATGAAGCGAGTAGAGGGCTACATGGAGAGGGCGGAGAC
TTTGAAGAAGATTGTGGTCGAACAGGCCGAAGCCAAGAACGGCATGGGCA
AAGGTGGCGGGGCCGGATGGCCAAGGCCACGATCATGAAGCGAGTAGAGG
GCTACATGGAGAGGGCGGAGACTTTGAAGAAGATTGTGGTCGAACAGGCC
GAAGCCAAGAACGGCATGGGCAAAGGTGGCGGGGCCGGGGGCGCGGCGAC
AGCTTCCGCGGCGGACAAGAAGAAGGACGAGGGGGGCGACGAGGAGCAGA
AGAAGCTGCGGGGCGCCCTCGCGTCGGCGATCGTCTCGGAGAAGCCCAAC
GTGAAGTGGGACGACGTTGCGGGGCTGGAGCAGGCGAAGAGCACGCTCAA
GGAGGCGGTCATCCTGCCGGCTAGGTTTCCGCAGCTCTTCACGGGGAAGC
GAAGGCCGTGGAAGGGTGGGCGCGGCGACAGCTTCCGCGGCGGACAAGAA
GAAGGACGAGGGGGGCGACGAGGAGCAGAAGAAGCTGCGGGGCGCCCTCG
CGTCGGCGATCGTCTCGGAGAAGCCCAACGTGAAGTGGGACGACGTTGCG
GGGCTGGAGCAGGCGAAGAGCACGCTCAAGGAGGCGGTCATCCTGCCGGC
TAGGTTTCCGCAGCTCTTCACGGGGAAGCGAAGGCCGTGGAAGGGT
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