mRNA_L-elsbetiae_contig1342.2638.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: D8LGK7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK7_ECTSI) HSP 1 Score: 268 bits (686), Expect = 5.940e-85 Identity = 128/144 (88.89%), Postives = 136/144 (94.44%), Query Frame = 3 Query: 381 SPIAEAEQSKRRRSQLADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 812 SP EAEQSKRRRSQLADRISNKLHA FW +VGV V YRTDFVRVL+EDERVDR+WFNIG+VCFSVN VILAYLTVWLPHV GI+VSWNVYSPRAIPTATVVG+ICALALN++LWNVWGFLTPLILFAVFIGCLFSLHFVPWPC Sbjct: 96 SPATEAEQSKRRRSQLADRISNKLHAFFWVVVGVAVVYRTDFVRVLVEDERVDRLWFNIGLVCFSVNAVILAYLTVWLPHVRGIRVSWNVYSPRAIPTATVVGLICALALNMSLWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 239
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: A0A836CLB2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLB2_9STRA) HSP 1 Score: 201 bits (511), Expect = 7.840e-60 Identity = 90/138 (65.22%), Postives = 110/138 (79.71%), Query Frame = 3 Query: 399 EQSKRRRSQLADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVPWPC 812 E+ KRRR++LA+RISNKLHA FW +V V Y TDFVRVL++D+RV R WFN+ CF+VN VI+ YLT+WLP V + WN+Y PRAIP AT VG+IC ++LN+ALW+VWGFLTPLIL VF+GCLF LHFVPWPC Sbjct: 22 EERKRRRTELAERISNKLHAAFWTIVAGVVVYYTDFVRVLLQDDRVKRPWFNLATACFAVNCVIMGYLTLWLPLVQRVSTPWNIYCPRAIPAATAVGVICGVSLNLALWSVWGFLTPLILLVVFMGCLFFLHFVPWPC 159
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: A0A6G0XCK9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCK9_9STRA) HSP 1 Score: 146 bits (368), Expect = 1.790e-38 Identity = 70/141 (49.65%), Postives = 94/141 (66.67%), Query Frame = 3 Query: 393 EAEQSKRRRSQL----ADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVP 803 E E+ K+R + A+ +S K+HA+ W + ++AY D RV D RV R++FNIG+VCF +N I YL VWLP+V I + W+VY PR IPTATVVG++CAL L + LW VWGF TP ILF +F+G L + HF+P Sbjct: 30 EIEELKKRMQEKSVSRAEWVSTKIHAVLWIVGAASLAYFLDVFRVAFRDARVHRIYFNIGLVCFGINCCITMYLAVWLPYVKKIDLEWSVYCPRMIPTATVVGLLCALMLTIGLWPVWGFFTPGILFVLFLGALMTAHFLP 170
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: W4FWN3_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FWN3_9STRA) HSP 1 Score: 142 bits (357), Expect = 8.940e-37 Identity = 69/139 (49.64%), Postives = 91/139 (65.47%), Query Frame = 3 Query: 396 AEQSKRRRSQLADR---ISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVP 803 AE KR + + R +S K+HAL W + + Y D +RV D RV RV+FNIG+VCF +N I YL++WLP+V I + W+VY PR +PTATVVG++CAL V LW VWGF TP ILF +F+G L + HF+P Sbjct: 39 AELKKRAQGKPPSRAEVVSTKIHALMWIVGAGFLLYYLDVLRVAFRDARVHRVYFNIGLVCFGINACITLYLSIWLPYVKKIDLEWSVYCPRMVPTATVVGIVCALMFTVGLWPVWGFFTPGILFVLFLGTLMTAHFLP 177
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: A0A485KKF8_9STRA (Aste57867_8441 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KKF8_9STRA) HSP 1 Score: 140 bits (353), Expect = 3.230e-36 Identity = 65/125 (52.00%), Postives = 83/125 (66.40%), Query Frame = 3 Query: 429 ADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVP 803 A+ IS KLHAL W L ++ Y D RV D RV RV+FNIG+VCF +N I YL VWLP++ I + W+VY PR +PTAT VG++CAL + LW VWG TP ILF +F+G L + HF+P Sbjct: 51 AEWISTKLHALLWVLGAGSLVYTLDVFRVAFRDARVHRVYFNIGLVCFGINCCITLYLAVWLPYIKKIDLEWSVYCPRMVPTATAVGLLCALTFTIGLWPVWGLFTPGILFVLFLGSLMTAHFLP 175
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: A0A1W0A176_9STRA (Transmembrane protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A176_9STRA) HSP 1 Score: 139 bits (350), Expect = 6.190e-36 Identity = 69/141 (48.94%), Postives = 90/141 (63.83%), Query Frame = 3 Query: 393 EAEQSKRRRS----QLADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVP 803 E EQ K+R A+ +S KLHA W V +AY D + V D RV R++FNIG+VCF +N I YL VWLP+V I + W+VY PR IPTAT++G++CAL + LW VWGF TP ILF +F+G L + HF+P Sbjct: 23 EIEQLKKRTQPKPPSKAEYVSTKLHAALWIGSAVALAYCLDVLNVAFHDPRVHRLYFNIGLVCFGMNCCITLYLAVWLPYVKKIDLEWSVYCPRMIPTATIIGILCALGFILGLWPVWGFFTPGILFVLFLGSLMTAHFLP 163
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: A0A024UNE8_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UNE8_9STRA) HSP 1 Score: 139 bits (350), Expect = 8.830e-36 Identity = 66/141 (46.81%), Postives = 89/141 (63.12%), Query Frame = 3 Query: 393 EAEQSKRRRS----QLADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVP 803 E E+ K+R A+ IS K+HA W + + Y D + V D RV RV+FN+G+VCF +N I YL +WLP+V I + WNVY PR +PTAT+VG++CAL + LW VWGF TP ILF +F+G L + HF+P Sbjct: 35 EIEELKKRAQGKPPSRAEVISTKIHAFLWIVGAGFLLYYLDVMHVAFRDSRVHRVYFNLGLVCFGINTCITLYLAIWLPYVKKIDLEWNVYCPRMVPTATIVGVVCALMFTMGLWPVWGFFTPGILFVLFLGALMTAHFLP 175
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: W7TLQ7_9STRA (Transmembrane protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLQ7_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.030e-34 Identity = 62/135 (45.93%), Postives = 93/135 (68.89%), Query Frame = 3 Query: 405 SKRRRSQLADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVPWP 809 SKR R+++ +RIS KL A W L + + T+FV V+++DER++RV+F++ ++C +N+ I YLTV+L + GI + W Y PR IP AT G++CA+ L +LW V+GF PLIL +F G +FS+HF+PWP Sbjct: 72 SKRERAEIWERISVKLQAGAWVLGMMATLHYTNFVHVVLDDERLNRVYFHLAMICLGINLCIGLYLTVYLQLIKGINIEWATYCPRMIPAATFSGVVCAICLVSSLWPVYGFFAPLILLVIFFGSMFSMHFIPWP 206
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: A0A2D4BMR8_PYTIN (Transmembrane protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BMR8_PYTIN) HSP 1 Score: 126 bits (316), Expect = 1.810e-30 Identity = 60/131 (45.80%), Postives = 81/131 (61.83%), Query Frame = 3 Query: 411 RRRSQLADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVP 803 R RSQ A SNK+HA W + +VAY DF V+ D RV + +F++G++C +N I YL ++LP++ I + WNVY PR IPTATVVG+I A A W +WG TP +L FIG L + HF+P Sbjct: 77 RARSQRAAAWSNKMHAFLWVVAAGSVAYALDFFHVIFHDPRVRQGFFHVGLMCVGINTCITCYLAIYLPYIKRIHLEWNVYCPRMIPTATVVGVIAAFCFICAFWPIWGLFTPGLLLLFFIGSLMTAHFLP 207
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Match: A0A8K1FM05_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FM05_PYTOL) HSP 1 Score: 125 bits (315), Expect = 1.920e-30 Identity = 62/140 (44.29%), Postives = 86/140 (61.43%), Query Frame = 3 Query: 393 EAEQSKRR---RSQLADRISNKLHALFWALVGVTVAYRTDFVRVLMEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIPTATVVGMICALALNVALWNVWGFLTPLILFAVFIGCLFSLHFVP 803 E++ K+R RS A S K+HAL W L +VAY DF V+ D R+ +F +G+VCF VN+ I YL ++LP++ I + W+VY PR IPTAT+VG++ + A W VWG LTP +L FIG L + HF+P Sbjct: 58 ESDALKKRMKTRSLQAAAWSTKMHALLWILAAASVAYAIDFFHVIFNDPRIKTGFFQVGLVCFGVNLCITCYLAIYLPYIKRITLEWSVYCPRMIPTATIVGVVASFCFVCAFWPVWGLLTPGLLLLFFIGSLMTAHFLP 197 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1342.2638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1342.2638.1 >prot_L-elsbetiae_contig1342.2638.1 ID=prot_L-elsbetiae_contig1342.2638.1|Name=mRNA_L-elsbetiae_contig1342.2638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=99bp MEDERVDRVWFNIGVVCFSVNVVILAYLTVWLPHVCGIKVSWNVYSPRAIback to top mRNA from alignment at L-elsbetiae_contig1342:23091..24937+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1342.2638.1 ID=mRNA_L-elsbetiae_contig1342.2638.1|Name=mRNA_L-elsbetiae_contig1342.2638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1847bp|location=Sequence derived from alignment at L-elsbetiae_contig1342:23091..24937+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1342:23091..24937+ >mRNA_L-elsbetiae_contig1342.2638.1 ID=mRNA_L-elsbetiae_contig1342.2638.1|Name=mRNA_L-elsbetiae_contig1342.2638.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=594bp|location=Sequence derived from alignment at L-elsbetiae_contig1342:23091..24937+ (Laminarionema elsbetiae ELsaHSoW15)back to top |