mRNA_L-elsbetiae_contig13419.2636.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: D7FWD4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD4_ECTSI) HSP 1 Score: 221 bits (562), Expect = 4.260e-71 Identity = 108/112 (96.43%), Postives = 108/112 (96.43%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQLPDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF 336 VQLLHKLKIRAAGNSTMLLKVVKNP TRHLPPG KTFGLSVEGTLYNPNHFAA LPDD PIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF Sbjct: 127 VQLLHKLKIRAAGNSTMLLKVVKNPPTRHLPPGSKTFGLSVEGTLYNPNHFAATLPDDAPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGIF 238
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A836CMU2_9STRA (Alpha/beta knot methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMU2_9STRA) HSP 1 Score: 166 bits (420), Expect = 1.180e-49 Identity = 78/111 (70.27%), Postives = 94/111 (84.68%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQLPDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHKLKIRAA ++ LL+VVKNPVTRHLP G + +G+SV GTLYNP FAAQLP+D PIV Y+GAMA GHLT ++PE+EEMI++SEYPLSGAAAI+R+ G IE+ WGI Sbjct: 119 VQLLHKLKIRAANSNATLLRVVKNPVTRHLPAGARIYGMSVVGTLYNPRLFAAQLPEDVPIVLYVGAMAQGHLTIADHPEVEEMISVSEYPLSGAAAIARVLGAIESEWGI 229
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A6U0WJW5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0WJW5_9STRA) HSP 1 Score: 168 bits (425), Expect = 1.280e-49 Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQLPDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHKLKIR+A MLL+V+KNPVTRHLP G +GLS G LYNP+HFA+ LPDD PIVF IGAM++GH+T +++P IEEMI+ISEYPLSGA AI+RL GGIENHWGI Sbjct: 184 VQLLHKLKIRSADGKDMLLRVIKNPVTRHLPAGAHIYGLSCTGELYNPHHFASALPDDAPIVFIIGAMSTGHITLNDHPYIEEMISISEYPLSGATAINRLVGGIENHWGI 294
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A4D9DCH5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DCH5_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.660e-46 Identity = 71/111 (63.96%), Postives = 90/111 (81.08%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQLPDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHKLK+R+A LLKV+KNPVTR+LP G K +G SV+GTLYNPN A LPDD P+VF +GAMA+GH+T ++P IEEM+++S++PLSGA AI+RL G IEN+WGI Sbjct: 116 VQLLHKLKVRSADGKATLLKVIKNPVTRYLPAGFKCYGFSVQGTLYNPNALACTLPDDKPVVFVLGAMAAGHITVQDHPYIEEMVSVSDFPLSGATAINRLLGAIENYWGI 226
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A7S2WTR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTR9_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.070e-42 Identity = 67/111 (60.36%), Postives = 87/111 (78.38%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQLPDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHK KIRA+GNS ML+KV+KNP +RH+P GC+ FG SV+GTLY P+ FA+ +PDD P + GAMASG + ++P IE+M +ISEYPLSGA A++R+ G IE+ WGI Sbjct: 130 VQLLHKFKIRASGNSEMLMKVIKNPFSRHIPAGCRCFGFSVKGTLYKPSSFASLMPDDQPCLLVFGAMASGSIQVQDHPYIEDMASISEYPLSGACALNRICGAIESRWGI 240
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A6S8XKM1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XKM1_9STRA) HSP 1 Score: 149 bits (376), Expect = 2.920e-42 Identity = 71/117 (60.68%), Postives = 91/117 (77.78%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQL------PDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHK+KI+A+G+ST L+KV+KNP +RHLP G + +G+SV G LY+P A + DD P+ F IGAMA+GH+TKD++P IEEM ++SEYPLSGAAAISR+ GGIEN WGI Sbjct: 177 VQLLHKMKIKASGSSTTLMKVIKNPFSRHLPAGTRVYGMSVGGKLYSPMSLAQAVLSDDPEGDDPPVCFIIGAMAAGHITKDDHPYIEEMFSVSEYPLSGAAAISRILGGIENRWGI 293
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A7S3Q0K3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0K3_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.630e-41 Identity = 69/117 (58.97%), Postives = 90/117 (76.92%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAA------QLPDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHK+KI+A ST L+KV+K P ++HLPPG + +G+S +GTLY+PN A Q D P+VF IGAMA+GH+T +++P IE+MI++SEYPLSGAAAISR+ GGIEN WGI Sbjct: 241 VQLLHKMKIKAGNTSTTLMKVIKGPFSQHLPPGARVYGMSCQGTLYSPNGLATALIPDEQTSDSPPVVFVIGAMAAGHITVEDHPYIEKMISVSEYPLSGAAAISRILGGIENQWGI 357
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A7R9W9I7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9I7_9STRA) HSP 1 Score: 144 bits (364), Expect = 9.130e-41 Identity = 69/119 (57.98%), Postives = 93/119 (78.15%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQL--PDDT------PIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHK+KI+A G+S L+KV+KNP ++HLP G + FG+S +GTLY+PN AA L PD + P+ F +GAMA+GH+T +++P IE+M ++SEYPLSGAAAISR+ GGIEN+WGI Sbjct: 147 VQLLHKMKIKAGGSSETLMKVIKNPFSQHLPAGTRVFGMSCQGTLYSPNALAAALVPPDPSAASGAPPVCFIVGAMATGHVTVEDHPYIEKMFSVSEYPLSGAAAISRILGGIENYWGI 265
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: A0A1E7FLB5_9STRA (Suppressor Mra1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FLB5_9STRA) HSP 1 Score: 138 bits (348), Expect = 6.360e-39 Identity = 68/119 (57.14%), Postives = 89/119 (74.79%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQL----PDDT----PIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 VQLLHK+KI+A +ST LL+V+KNP++ HLPPG + FG S EG LY+P A + PD T P F +GAM+SGH+T D++P IE+M++IS YPLSGAAA+SRL GGIE+HWG+ Sbjct: 98 VQLLHKMKIKAGNDSTTLLQVIKNPLSSHLPPGTRCFGFSCEGQLYSPIALAKTVVSIEPDTTGKIPPTCFVVGAMSSGHVTIDDHPYIEKMLSISSYPLSGAAALSRLMGGIEHHWGV 216
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Match: F0WIG5_9STRA (Ribosome biogenesis protein NEP1 putative n=2 Tax=Albugo TaxID=65356 RepID=F0WIG5_9STRA) HSP 1 Score: 135 bits (341), Expect = 6.870e-38 Identity = 64/111 (57.66%), Postives = 80/111 (72.07%), Query Frame = 1 Query: 1 VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHFAAQLPDDTPIVFYIGAMASGHLTKDENPEIEEMIAISEYPLSGAAAISRLFGGIENHWGI 333 +QLLH LKIR++ + LL V+KNPVTR+LP CK + +S GTL NP F +LP D PIVF IGAMA G +TK+ ++E+I+ISEYPLSGA AI+RLF E HWGI Sbjct: 104 IQLLHTLKIRSSDGNQTLLNVIKNPVTRYLPANCKKYAMSCSGTLMNPWEFVEKLPTDEPIVFVIGAMAHGSITKENTNYVDEIISISEYPLSGAQAITRLFNAFERHWGI 214 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13419.2636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13419.2636.1 >prot_L-elsbetiae_contig13419.2636.1 ID=prot_L-elsbetiae_contig13419.2636.1|Name=mRNA_L-elsbetiae_contig13419.2636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=113bp VQLLHKLKIRAAGNSTMLLKVVKNPVTRHLPPGCKTFGLSVEGTLYNPNHback to top mRNA from alignment at L-elsbetiae_contig13419:1006..4899- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13419.2636.1 ID=mRNA_L-elsbetiae_contig13419.2636.1|Name=mRNA_L-elsbetiae_contig13419.2636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3894bp|location=Sequence derived from alignment at L-elsbetiae_contig13419:1006..4899- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13419:1006..4899- >mRNA_L-elsbetiae_contig13419.2636.1 ID=mRNA_L-elsbetiae_contig13419.2636.1|Name=mRNA_L-elsbetiae_contig13419.2636.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=678bp|location=Sequence derived from alignment at L-elsbetiae_contig13419:1006..4899- (Laminarionema elsbetiae ELsaHSoW15)back to top |