mRNA_L-elsbetiae_contig13417.2634.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13417.2634.1
Unique NamemRNA_L-elsbetiae_contig13417.2634.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A2P6NII7_9EUKA (Lipoprotein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NII7_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 4.000e-20
Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F RG    GW     G+K+ + E +MP       N PA+WALNA+VL +AQYGCNCRG+GG+GGCGE D++E I
Sbjct:  121 FSRGTSYHGW----GGSKMFVIEYNMPQSTDSSNNIPAIWALNAQVLHSAQYGCNCRGMGGSGGCGELDLVEVI 190          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A2P6N053_9EUKA (Lipoprotein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6N053_9EUKA)

HSP 1 Score: 90.1 bits (222), Expect = 1.580e-19
Identity = 39/74 (52.70%), Postives = 50/74 (67.57%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F RG    GW     G+K+   + +MP       N PA+WALNA+VLR+AQYGCNCRG+GG+GGCGE D++E I
Sbjct:  180 FSRGTAYHGW----GGSKMFAIQYNMPQSTDSNNNIPAIWALNAQVLRSAQYGCNCRGMGGSGGCGELDLVEVI 249          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A1X6MZQ9_9APHY (Uncharacterized protein n=2 Tax=Postia placenta TaxID=104341 RepID=A0A1X6MZQ9_9APHY)

HSP 1 Score: 87.4 bits (215), Expect = 9.650e-19
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F RG    GW     G+K+M+   +MP       N PA+WALNA+V+R AQYGCNCRG GGNGGCGE DI+E I
Sbjct:  189 FSRGTANHGW----SGSKLMVLTFNMPPSSDAS-NVPAIWALNAQVVRAAQYGCNCRGEGGNGGCGELDILEVI 257          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A0C3NUK6_PHLGI (Uncharacterized protein n=1 Tax=Phlebiopsis gigantea 11061_1 CR5-6 TaxID=745531 RepID=A0A0C3NUK6_PHLGI)

HSP 1 Score: 86.3 bits (212), Expect = 2.550e-18
Identity = 41/74 (55.41%), Postives = 51/74 (68.92%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F RG   +GW G    +K++IFE  MP   T   + PA+W LNA+V+R AQYGCNCRGVGG+GGCGE DI E +
Sbjct:  195 FSRGTANQGWAG----SKMVIFEFTMPDDAT---SLPAIWGLNAQVVRAAQYGCNCRGVGGDGGCGEIDIAETL 261          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A165PHX7_9AGAM (Uncharacterized protein n=1 Tax=Neolentinus lepideus HHB14362 ss-1 TaxID=1314782 RepID=A0A165PHX7_9AGAM)

HSP 1 Score: 85.5 bits (210), Expect = 5.110e-18
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            FFRG    GW      +K+ I EV+MP   +     PA+WALNA+++R+AQYGCNCRGVG +GGCGE D++E I
Sbjct:  194 FFRGTANEGWAD----SKMFIMEVEMPSGGSTP---PAIWALNAQIVRSAQYGCNCRGVGADGGCGELDVVEVI 260          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: UPI0004416550 (hypothetical protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI0004416550)

HSP 1 Score: 85.5 bits (210), Expect = 5.270e-18
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F+RG    GW G    +K+ +FE DMP     +   PA+WALN +V+R+AQYGCNCRG GG GGCGE D++E +
Sbjct:  197 FYRGTSNLGWAG----SKMFVFEFDMP--SDSDSVTPAIWALNGQVVRSAQYGCNCRGEGGEGGCGEIDLVENL 264          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A165D0F9_9APHY (Uncharacterized protein n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165D0F9_9APHY)

HSP 1 Score: 84.7 bits (208), Expect = 7.950e-18
Identity = 38/74 (51.35%), Postives = 50/74 (67.57%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F RG    GW G    +K+++   DMP  +    N PA+WALNA+V+R AQYGCNCRG GG+GGCGE D++E +
Sbjct:  166 FSRGTSNHGWTG----SKMIVMTFDMPDSDGA--NIPAIWALNAQVVRAAQYGCNCRGEGGDGGCGELDVLEVL 233          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A401GFD8_9APHY (Cell wall protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GFD8_9APHY)

HSP 1 Score: 84.7 bits (208), Expect = 9.660e-18
Identity = 38/71 (53.52%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   10 GVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            G    GW G    +K+ +F +DMP  +    + PAVW LNA+V+R AQYGCNCRG+GGNGGCGE DI+E +
Sbjct:  196 GTANHGWKG----SKMFVFTLDMPASDNAA-DVPAVWVLNAQVVRAAQYGCNCRGMGGNGGCGELDILEVL 261          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A2H3J137_WOLCO (Uncharacterized protein n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J137_WOLCO)

HSP 1 Score: 83.6 bits (205), Expect = 2.510e-17
Identity = 39/74 (52.70%), Postives = 48/74 (64.86%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F RG    GW      +K+ +F  DMP      +  PA+WALNA+V+R+AQYGCNCRG G NGGCGE DI+E I
Sbjct:  190 FSRGTANHGWAD----SKMFVFTFDMPSSSDASQ-LPAIWALNAQVVRSAQYGCNCRGEGANGGCGELDILEVI 258          
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Match: A0A4R0RUG8_9APHY (Uncharacterized protein n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0RUG8_9APHY)

HSP 1 Score: 83.6 bits (205), Expect = 2.550e-17
Identity = 38/74 (51.35%), Postives = 46/74 (62.16%), Query Frame = 1
Query:    1 FFRGVGMRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNCRGVGGNGGCGEFDIIEAI 222
            F RG    GW     G+K  IFE DMP       N PA+W LN +V+  AQYGCNCRG+GG+GGCGE D+ E +
Sbjct:  193 FARGTASHGW----SGSKAFIFEFDMP--SDGSSNPPAIWLLNQQVVNAAQYGCNCRGMGGSGGCGELDVFEVL 260          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13417.2634.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6NII7_9EUKA4.000e-2052.70Lipoprotein n=1 Tax=Planoprotostelium fungivorum T... [more]
A0A2P6N053_9EUKA1.580e-1952.70Lipoprotein n=1 Tax=Planoprotostelium fungivorum T... [more]
A0A1X6MZQ9_9APHY9.650e-1955.41Uncharacterized protein n=2 Tax=Postia placenta Ta... [more]
A0A0C3NUK6_PHLGI2.550e-1855.41Uncharacterized protein n=1 Tax=Phlebiopsis gigant... [more]
A0A165PHX7_9AGAM5.110e-1852.70Uncharacterized protein n=1 Tax=Neolentinus lepide... [more]
UPI00044165505.270e-1851.35hypothetical protein n=1 Tax=Punctularia strigosoz... [more]
A0A165D0F9_9APHY7.950e-1851.35Uncharacterized protein n=1 Tax=Laetiporus sulphur... [more]
A0A401GFD8_9APHY9.660e-1853.52Cell wall protein n=1 Tax=Sparassis crispa TaxID=1... [more]
A0A2H3J137_WOLCO2.510e-1752.70Uncharacterized protein n=1 Tax=Wolfiporia cocos (... [more]
A0A4R0RUG8_9APHY2.550e-1751.35Uncharacterized protein n=1 Tax=Steccherinum ochra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13417contigL-elsbetiae_contig13417:12..588 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score80.9
Seed ortholog evalue2.6e-13
Seed eggNOG ortholog202698.XP_007383211.1
Preferred nameTOS1
Hectar predicted targeting categoryother localisation
GOsGO:0000271,GO:0000322,GO:0000323,GO:0000324,GO:0003674,GO:0003824,GO:0003843,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005975,GO:0005976,GO:0006073,GO:0006074,GO:0006075,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009272,GO:0009277,GO:0009987,GO:0010383,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0030312,GO:0033692,GO:0034406,GO:0034407,GO:0034410,GO:0034411,GO:0034637,GO:0034645,GO:0035251,GO:0042546,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044038,GO:0044042,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0051273,GO:0051274,GO:0051278,GO:0070589,GO:0070592,GO:0070879,GO:0070880,GO:0071554,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071966,GO:0071969,GO:0071970,GO:1901576
EggNOG free text desc.Putative TOS1-like glycosyl hydrolase (DUF2401)
EggNOG OGs228P3@155619,2CBPA@1,2QSI7@2759,39SJ2@33154,3H2UX@355688,3NUXK@4751,3V96R@5204
COG Functional cat.S
Best tax levelAgaricomycetes incertae sedis
Best eggNOG OGNA|NA|NA
Exons2
Model size222
Cds size204
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13417.2634.1prot_L-elsbetiae_contig13417.2634.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13417 12..570 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.2772737-CDS-L-elsbetiae_contig13417:11..981622815513.2772737-CDS-L-elsbetiae_contig13417:11..98Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13417 12..98 -
1691682935.3668013-CDS-L-elsbetiae_contig13417:11..981691682935.3668013-CDS-L-elsbetiae_contig13417:11..98Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13417 12..98 -
1622815513.2876468-CDS-L-elsbetiae_contig13417:453..5701622815513.2876468-CDS-L-elsbetiae_contig13417:453..570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13417 454..570 -
1691682935.3773544-CDS-L-elsbetiae_contig13417:453..5701691682935.3773544-CDS-L-elsbetiae_contig13417:453..570Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13417 454..570 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815513.297009-UTR-L-elsbetiae_contig13417:570..5881622815513.297009-UTR-L-elsbetiae_contig13417:570..588Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13417 571..588 -
1691682935.386298-UTR-L-elsbetiae_contig13417:570..5881691682935.386298-UTR-L-elsbetiae_contig13417:570..588Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13417 571..588 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13417.2634.1

>prot_L-elsbetiae_contig13417.2634.1 ID=prot_L-elsbetiae_contig13417.2634.1|Name=mRNA_L-elsbetiae_contig13417.2634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=68bp
MRGWMGGEDGTKVMIFEVDMPHCETCERNRPAVWALNARVLRTAQYGCNC
RGVGGNGGCGEFDIIEAI
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mRNA from alignment at L-elsbetiae_contig13417:12..588-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13417.2634.1 ID=mRNA_L-elsbetiae_contig13417.2634.1|Name=mRNA_L-elsbetiae_contig13417.2634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=577bp|location=Sequence derived from alignment at L-elsbetiae_contig13417:12..588- (Laminarionema elsbetiae ELsaHSoW15)
TTCTTCCGTGGCGTCGGAATGCGCGGGTGGATGGGAGGGGAGGACGGTAC CAAGGTCATGATCTTCGAGGTAGATATGCCGCACTGCGAAACCTGCGAGC GGAACCGTCCCGCTGTATGGGCACTCAACGCCAGGGTGAGTATGTGCAAC AGTAGTAGGGTTTTGAGCTGAGATGCGCTGGTCTAAGCTGGCATCGGGTT GAGGTAATGTATAGATATGGGTGTGGTGGTGTGCGTGTGCGAGGAGAGTG TTTCATCGGATGGGCGGATCGAACTGCCAAACATGAATCAATGGCATGAC CTACGGAGAAGAAATGAGCAGCCCACCTCCAACCAACCAATATCAGATTG TGTTGCGCTAGTAGCTCCACCGCGCAATAAATTATCATGTACAACAGATC TTGTGTCGATAGTCATTTAGATAAGTCTACACTCAATACTTCCCAACACT CGAAACCCGAGTGTACCGATCCTAAACTCCCCCCCGACAGGTTCTGAGAA CCGCGCAGTATGGGTGCAACTGCCGAGGAGTTGGCGGGAACGGCGGGTGT GGGGAGTTCGATATTATTGAGGCCATC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13417:12..588-

>mRNA_L-elsbetiae_contig13417.2634.1 ID=mRNA_L-elsbetiae_contig13417.2634.1|Name=mRNA_L-elsbetiae_contig13417.2634.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=408bp|location=Sequence derived from alignment at L-elsbetiae_contig13417:12..588- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGCGGGTGGATGGGAGGGGAGGACGGTACCAAGGTCATGATCTTCGA
GGTAGATATGCCGCACTGCGAAACCTGCGAGCGGAACCGTCCCGCTGTAT
GGGCACTCAACGCCAGGATGCGCGGGTGGATGGGAGGGGAGGACGGTACC
AAGGTCATGATCTTCGAGGTAGATATGCCGCACTGCGAAACCTGCGAGCG
GAACCGTCCCGCTGTATGGGCACTCAACGCCAGGGTTCTGAGAACCGCGC
AGTATGGGTGCAACTGCCGAGGAGTTGGCGGGAACGGCGGGTGTGGGGAG
TTCGATATTATTGAGGCCATCGTTCTGAGAACCGCGCAGTATGGGTGCAA
CTGCCGAGGAGTTGGCGGGAACGGCGGGTGTGGGGAGTTCGATATTATTG
AGGCCATC
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