mRNA_L-elsbetiae_contig13412.2633.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: D8LCQ5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCQ5_ECTSI) HSP 1 Score: 223 bits (567), Expect = 1.900e-73 Identity = 105/118 (88.98%), Postives = 109/118 (92.37%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLK--LNGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYVQ 348 GCLPDLAHDGVG ED ESRWSCAEEIVPDGGQCEITF+FDSPQD+TDVQVAFWKGDERTRTLK +NGDK+GEYESYPGSTFNSFGIQENGVHTV MESVGID DDWISLLEV F V Sbjct: 2 GCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEITFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVAMESVGIDADDWISLLEVRFMVD 119
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: A0A6H5J8U9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8U9_9PHAE) HSP 1 Score: 224 bits (571), Expect = 2.890e-70 Identity = 105/118 (88.98%), Postives = 111/118 (94.07%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLK--LNGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYVQ 348 GCLPDLAHDGVG ED ESRWSCAEEIVPDGGQCEI+F+FDSPQD+TDVQVAFWKGDERTRTLK +NGDK+GEYESYPGSTFNSFGIQENGVHTVTMESVGID+DDWISLLEV F V Sbjct: 284 GCLPDLAHDGVGEEDTESRWSCAEEIVPDGGQCEISFTFDSPQDITDVQVAFWKGDERTRTLKVKINGDKIGEYESYPGSTFNSFGIQENGVHTVTMESVGIDRDDWISLLEVRFMVD 401
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: A0A6H5JFX1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JFX1_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.590e-44 Identity = 73/118 (61.86%), Postives = 94/118 (79.66%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLK--LNGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYVQ 348 GCLP LA DG+ +D ESRWSCAE+IVPDGGQCEI F+F PQ++ +QV FWKG+ERTRTLK +NG+K GE++S+PGS + F + VHTVT+ES+G+D D+WISLLEV+F V+ Sbjct: 224 GCLPVLATDGI-TDDVESRWSCAEDIVPDGGQCEIEFTFSHPQNLKQLQVDFWKGEERTRTLKVKINGEKFGEFDSHPGSVTSYFDVIAYDVHTVTLESLGLDTDEWISLLEVIFMVE 340
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: D7G3F6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F6_ECTSI) HSP 1 Score: 130 bits (328), Expect = 1.000e-35 Identity = 62/118 (52.54%), Postives = 82/118 (69.49%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLKL--NGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYVQ 348 GC P DG+ E AESRWSCA +IVP GG C+I + F PQD+ D+QVAFWKGDER RTL++ +G +ESY GSTFN G+ G+ +V +ESV + +++WISL+EVL +V Sbjct: 108 GCTPANTRDGISNE-AESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIQVAFWKGDERVRTLEVYFDGTLYRTHESYAGSTFNPLGVSATGISSVMLESVDLLENEWISLIEVLIFVS 224
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: D7FI81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI81_ECTSI) HSP 1 Score: 129 bits (325), Expect = 2.120e-34 Identity = 61/119 (51.26%), Postives = 83/119 (69.75%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLKL--NGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYVQI 351 GC AHDG+ + + ESRWSCA +VPD G C+I FSF PQD+ D+QVAFW+G+ERTRT+ + +G+ +ESY STFN+ G+ TV +ESV + D+WISLLEVL +V++ Sbjct: 192 GCAAIKAHDGI-ISEIESRWSCATMLVPDEGPCQIEFSFADPQDIVDIQVAFWEGNERTRTVDIFIDGELTHTHESYADSTFNTLGVTATEASTVMLESVDLLSDEWISLLEVLIFVKV 309
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: D7FI77_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI77_ECTSI) HSP 1 Score: 122 bits (307), Expect = 3.580e-33 Identity = 58/117 (49.57%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTL--KLNGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYV 345 GC DG+ + ESRWSCA ++VPD G C+I F+F PQ + D+QVAFWKG++RTRTL +NG+ +ESY STFN+ G+ N TV +ES + D+WISL+EVL +V Sbjct: 56 GCTATNTRDGI-FSEIESRWSCATKLVPDEGPCQIEFTFAEPQHIVDIQVAFWKGNDRTRTLGVHVNGELTHTHESYTDSTFNTLGVTANEASTVMLESTALLSDEWISLIEVLIFV 171
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: D7G0S3_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 124 bits (312), Expect = 1.700e-32 Identity = 59/117 (50.43%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLKL--NGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYV 345 GC + A DG+ E ESRWSCA +++ D G C+I FSF PQ++ D+QVAFWKG+ER RTL++ NG+ +ESY STFN+ G+ N +TV +ESV + ++WISL+EVL +V Sbjct: 189 GCAANNARDGISTE-IESRWSCAAKLLDDEGPCQIEFSFAEPQNIVDIQVAFWKGNERVRTLEVYVNGELTHTHESYADSTFNTLGVTANEANTVMLESVSLLSNEWISLIEVLIFV 304
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: D7FI87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 128 bits (321), Expect = 3.690e-32 Identity = 64/117 (54.70%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTL--KLNGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYV 345 GC DG+ V D ESRWSCA +VPD G C+I FSF PQ+V D+QVAFWKG+ERTRTL +NG+ +ESY STFN+ G+ TV +ESV + D+WISLLEVL +V Sbjct: 494 GCTATNTRDGI-VSDIESRWSCATILVPDEGACQIEFSFAEPQNVVDIQVAFWKGNERTRTLWVHVNGELTHTHESYADSTFNTLGVTATEASTVMLESVALLSDEWISLLEVLIFV 609
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: D7G5F4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F4_ECTSI) HSP 1 Score: 122 bits (305), Expect = 3.910e-32 Identity = 58/117 (49.57%), Postives = 79/117 (67.52%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLK--LNGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVLFYV 345 GC DG+ + ESRWSCA ++V D G C+I F+F PQ + D+QVAFWKG+ERTRTL+ +NG+ +ESY +TFN+ G+ V TV +ESV + D+WISL+EVL +V Sbjct: 120 GCTAANTRDGI-FSEIESRWSCATKLVDDEGPCQIEFTFAEPQTIVDIQVAFWKGNERTRTLEVYINGEMTHTHESYADATFNTLGVTATDVSTVMLESVALLSDEWISLIEVLIFV 235
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Match: A0A6H5JTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 123 bits (308), Expect = 2.450e-30 Identity = 59/114 (51.75%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 1 GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVAFWKGDERTRTLKL--NGDKVGEYESYPGSTFNSFGIQENGVHTVTMESVGIDKDDWISLLEVL 336 GC P DG+ E ESRWSCA +IVP GG C+I + F PQD+ D++VAFW GDER RTL++ +G +ESY GSTFNS G+ G+ TV +ESV + +++WISL+EV+ Sbjct: 514 GCSPANTRDGISNE-TESRWSCASKIVPGGGPCQIEYVFGEPQDIEDIKVAFWMGDERVRTLEVYFDGTLHRTHESYAGSTFNSLGVSATGIGTVMLESVDLLENEWISLIEVV 626 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13412.2633.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13412.2633.1 >prot_L-elsbetiae_contig13412.2633.1 ID=prot_L-elsbetiae_contig13412.2633.1|Name=mRNA_L-elsbetiae_contig13412.2633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=118bp GCLPDLAHDGVGVEDAESRWSCAEEIVPDGGQCEITFSFDSPQDVTDVQVback to top mRNA from alignment at L-elsbetiae_contig13412:896..2876+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13412.2633.1 ID=mRNA_L-elsbetiae_contig13412.2633.1|Name=mRNA_L-elsbetiae_contig13412.2633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1981bp|location=Sequence derived from alignment at L-elsbetiae_contig13412:896..2876+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13412:896..2876+ >mRNA_L-elsbetiae_contig13412.2633.1 ID=mRNA_L-elsbetiae_contig13412.2633.1|Name=mRNA_L-elsbetiae_contig13412.2633.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=708bp|location=Sequence derived from alignment at L-elsbetiae_contig13412:896..2876+ (Laminarionema elsbetiae ELsaHSoW15)back to top |