mRNA_L-elsbetiae_contig13411.2632.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A6H5JZ77_9PHAE (Glyco_hydro_114 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZ77_9PHAE) HSP 1 Score: 356 bits (913), Expect = 5.300e-119 Identity = 164/212 (77.36%), Postives = 184/212 (86.79%), Query Frame = 1 Query: 49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKSVCDEANALGLDTILKDYDLKPPFCSCVDPSRDLDCMY 684 DAGQ VID+LH+KGKGVVCYISIGTVEDWR D EFP+SAIGG V GWAGEKW+DVND VRE+M+ARV+ A SM+CDA+EPDNMMVYTEGS TG+ VSEA+QI+YN+WFAD VH GM VGLKN VELVP+LVNKFDFALNEECH WNEC Y+ TFLA+GKPV+NVEY+ SVCDEANALGLDTILK YDL FCSCVDPSRD+DCM+ Sbjct: 173 DAGQGVIDELHDKGKGVVCYISIGTVEDWRDDAKEFPSSAIGGDVSGWAGEKWVDVNDQDVREIMTARVEMASSMNCDAVEPDNMMVYTEGSSTGVSVSEAEQIEYNSWFADIVHAYGMGVGLKNAVELVPILVNKFDFALNEECHEWNECNVYEDTFLAEGKPVYNVEYNLGNSVCDEANALGLDTILKSYDLDAAFCSCVDPSRDVDCMH 384
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: D7FRL2_ECTSI (Endo alpha-1,4 polygalactosaminidase precusor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRL2_ECTSI) HSP 1 Score: 219 bits (559), Expect = 2.030e-61 Identity = 110/210 (52.38%), Postives = 137/210 (65.24%), Query Frame = 1 Query: 49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKSVCDEANALGLDTILKDYDLKPPFCSCVDPSRDLDC 678 D Q IDDLH KGK V CYIS+GT E WR D FP S IG ++ W E +LD+ VREVM ARV+ A S +CDA+EP+NM + + TG +S DQ+ YN WFA V + GM VG+K++ ELV L + +DFA+ ECH ECG Y FL + KPVFNVEY + VCDE+NALG+DTI K+ +L P CSC D SRD+DC Sbjct: 524 DNAQDTIDDLHAKGKYVACYISVGTAEPWREDFELFPDSVIGQRMEEWEAESYLDITQESVREVMEARVKKAASTNCDAVEPNNMSNWNQ-ENTGFTISRDDQVAYNIWFALLVRENGMRVGIKDSFELVGDLNSYYDFAI-AECHEEFECGVYTVPFLLKDKPVFNVEYSKDYGVCDESNALGIDTIFKNLELDAPLCSCADSSRDVDC 731
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A1I0KAA5_9DELT (Glyco_hydro_114 domain-containing protein n=3 Tax=Stigmatella TaxID=40 RepID=A0A1I0KAA5_9DELT) HSP 1 Score: 199 bits (506), Expect = 5.550e-59 Identity = 97/218 (44.50%), Postives = 140/218 (64.22%), Query Frame = 1 Query: 7 NTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGE---KSVCDEANALGLDTILKDYDLKPPFCSC 651 N AV+ LF D + ++ L +G+ V+CY S G+ E+WRSD G FPA+A+G +DGW GE+WLD+ + +VR++M R++ A+ CDA++PDN+ Y + TG ++ ADQ+ +N + A E H G+ VGLKN V V LVN FDF +NEEC ++EC E F+A GKPVF++EY G + +C +ANAL DT++K+ DL P SC Sbjct: 68 NVAVYDVDLF----DTPVSTLNALKAQGRKVICYFSAGSYENWRSDAGSFPAAALGNALDGWPGERWLDIRNTKVRDIMRTRIELARQKGCDAVDPDNVDGYA--NATGFKLTSADQLSFNRFLATEAHARGLAVGLKNDVGQVAQLVNDFDFQVNEECFQYDECEELLP-FIAAGKPVFSIEYGGNALAQQICPQANALNFDTLVKNLDLDAPRISC 278
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A7V4LGC7_9DELT (Endo alpha-1,4 polygalactosaminidase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V4LGC7_9DELT) HSP 1 Score: 191 bits (484), Expect = 4.900e-55 Identity = 98/198 (49.49%), Postives = 127/198 (64.14%), Query Frame = 1 Query: 49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS----VCDEANALGLDTILKDYDL 630 DA QAVID L +G V+CY S G+ EDWR D G+FP +A+G +DGW GE+WLD+ P VR +M AR+ A + CD +EPDN+ Y SG L + A Q+DYN + A E H G+ VGLKN +E V L+ FD+AL+EEC W+EC + + F+A GK VF VEY G+ S VC ANAL DT++K DL Sbjct: 131 DAPQAVIDGLRARGVAVICYFSAGSREDWREDAGDFPPAAVGEPLDGWPGERWLDIRSPDVRRIMQARLDRAVARRCDGVEPDNVDAYANDSGFPL--TAAHQLDYNRFLAAEAHARGLSVGLKNDLEQVEDLLADFDWALDEECFQWDEC-DLLRPFVAAGKAVFQVEY-GDASLAADVCPRANALDFDTLIKRLDL 324
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A5C8AXX1_9BURK (Glyco_hydro_114 domain-containing protein n=1 Tax=Aquabacterium sp. TaxID=1872578 RepID=A0A5C8AXX1_9BURK) HSP 1 Score: 188 bits (477), Expect = 5.920e-55 Identity = 96/201 (47.76%), Postives = 126/201 (62.69%), Query Frame = 1 Query: 1 TQNTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600 T N V+ LF D I +L +G+ VVCY S G+ EDWR+D G FP SA+G + GW GE+WLD+ +PQVRE+M+ R+Q AKS CDA+EPDN+ Y+ +G GL + ADQIDYN W + + H + + LKN VELVP LVN FDF +NE C+ + EC Y+ F QGK VF EY S +C +A + G Sbjct: 43 TPNRLVYDIDLF----DNSATTISNLKSQGRIVVCYFSAGSWEDWRADAGLFPQSALGAELSGWPGERWLDIRNPQVRELMARRMQLAKSKGCDALEPDNIDGYSNSNGLGL--TAADQIDYNRWLSQQAHALDLAIALKNAVELVPELVNDFDFVINESCYAYKECDIYR-LFRQQGKAVFIAEYRSYSSNMCSKAASAG 236
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A150SSH0_SORCE (Endo alpha-1,4 polygalactosaminidase n=3 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150SSH0_SORCE) HSP 1 Score: 185 bits (469), Expect = 4.840e-54 Identity = 96/204 (47.06%), Postives = 124/204 (60.78%), Query Frame = 1 Query: 49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEY---DGEKSVCDEANALGLDTILKDYDLKPPFCSC 651 +A QA ID L GK V+CY S G+ EDWRSD FPA+A+G +DGW GE+WLD VR+VM AR+ A CD +EPDN+ YT GSG L + A Q+DYN + A E H G+ +GLKN ++ V LV FD+ALNEECH ++EC E F+ GK VF+ EY +VC + LGL T++K DL +C Sbjct: 31 EAPQATIDALRAAGKKVICYFSAGSSEDWRSDASRFPAAALGNPLDGWPGERWLDTRSAGVRDVMKARLDLAVQKRCDGVEPDNVDGYTNGSGFPL--TAATQLDYNRFLAAEAHARGLSIGLKNDLDQVRDLVGHFDWALNEECHAYDEC-EMLTPFIRAGKAVFHAEYVAASQANAVCADTKPLGLSTLIKRLDLDAWRVAC 231
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A1G3E0C0_9GAMM (Glyco_hydro_114 domain-containing protein n=1 Tax=Pseudomonadales bacterium RIFCSPHIGHO2_02_FULL_60_43 TaxID=1802005 RepID=A0A1G3E0C0_9GAMM) HSP 1 Score: 184 bits (468), Expect = 6.060e-54 Identity = 88/185 (47.57%), Postives = 120/185 (64.86%), Query Frame = 1 Query: 49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600 D I +L +G+ VVCY S G+ EDWRSD ++P A+G +DGW GE+WLD+ P VR +M+ R++ A CDA+EPDN+ Y+ G+G GL SEA+QIDYN W + + H+ + + LKN VEL+P LV+ FDFALNE C+ + EC Y+ F QGK VF EY S +C +A+A G Sbjct: 29 DTSTTTITNLKGQGRIVVCYFSAGSWEDWRSDAAQYPKEALGAQLDGWPGERWLDIRHPAVRTLMAKRIRLAAEKGCDAVEPDNVDGYSNGNGLGL--SEANQIDYNRWLSQQAHEHNLAIALKNAVELIPALVDDFDFALNESCYAYKECEAYR-LFRQQGKAVFIAEYRSYNSNMCSKASASG 210
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: Q098C2_STIAD (Endo alpha-1,4 polygalactosaminidase precusor n=2 Tax=Stigmatella aurantiaca TaxID=41 RepID=Q098C2_STIAD) HSP 1 Score: 187 bits (475), Expect = 6.780e-54 Identity = 93/218 (42.66%), Postives = 136/218 (62.39%), Query Frame = 1 Query: 7 NTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGE---KSVCDEANALGLDTILKDYDLKPPFCSC 651 N V+ LF D A + L +G+ V+CY S G+ EDWR D FP++ +G +DGW GE+WLD+ VR++M +R++ A+ CDA++PDN+ Y+ + TG ++ ADQ+ +N + A E H G+ VGLKN V+ V LVN FDF +NEEC ++EC + + F+ GK VF++EY G +SVC EANALG DT++K+ +L SC Sbjct: 104 NVPVYDVDLF----DTPTATLTALKSQGRKVICYFSAGSYEDWRPDAKSFPSAVLGKALDGWPGERWLDIRATSVRDIMRSRIELARQKGCDAVDPDNVDGYS--NNTGFRLTSADQLAFNRFLASEAHSRGLAVGLKNDVDQVTQLVNDFDFQVNEECLQYDEC-DTLRPFITAGKAVFHIEYGGAALAQSVCPEANALGFDTLVKNLELDAARISC 314
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A1H7R5T2_9GAMM (Glyco_hydro_114 domain-containing protein n=2 Tax=Atopomonas hussainii TaxID=1429083 RepID=A0A1H7R5T2_9GAMM) HSP 1 Score: 185 bits (469), Expect = 1.050e-53 Identity = 89/185 (48.11%), Postives = 122/185 (65.95%), Query Frame = 1 Query: 49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600 D + I +L +G+ VVCY S G+ EDWR D ++P SA+G + GW GE+WLD+ +PQVR +++ R+ A S C A+EPDN+ Y+ +G GL SEADQ+D+N W AD+ H + + LKN VEL+P LVN FDFALNE C+ +NECG Y F AQGK VF EY + +C++A + G Sbjct: 59 DTPASTIANLKAQGRIVVCYFSAGSWEDWRDDAAQYPQSALGNNLSGWPGERWLDIRNPQVRTLLAKRLDLAASKGCHAVEPDNIDGYSNDNGLGL--SEADQVDFNRWLADQAHARQLGIALKNAVELIPQLVNHFDFALNESCYRYNECGGYS-AFTAQGKAVFIAEYRKYSTKLCNKAASSG 240
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Match: A0A654BBT4_9PSED (Glyco_hydro_114 domain-containing protein n=4 Tax=Pseudomonas TaxID=286 RepID=A0A654BBT4_9PSED) HSP 1 Score: 184 bits (468), Expect = 1.320e-53 Identity = 88/185 (47.57%), Postives = 120/185 (64.86%), Query Frame = 1 Query: 49 DAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGEFPASAIGGGVDGWAGEKWLDVNDPQVREVMSARVQTAKSMSCDAIEPDNMMVYTEGSGTGLDVSEADQIDYNTWFADEVHQAGMFVGLKNTVELVPVLVNKFDFALNEECHTWNECGEYKKTFLAQGKPVFNVEYDGEKS-VCDEANALG 600 D I +L +G+ VVCY S G+ EDWRSD ++P A+G +DGW GE+WLD+ P VR +M+ R++ A CDA+EPDN+ Y+ G+G GL SEA+QIDYN W + + H+ + + LKN VEL+P LV+ FDFALNE C+ + EC Y+ F QGK VF EY S +C +A+A G Sbjct: 55 DTSTTTITNLKGQGRIVVCYFSAGSWEDWRSDAAQYPKEALGAQLDGWPGERWLDIRHPAVRTLMAKRIRLAAEKGCDAVEPDNVDGYSNGNGLGL--SEANQIDYNRWLSQQAHEHNLAIALKNAVELIPALVDDFDFALNESCYAYKECEAYR-LFRQQGKAVFIAEYRSYNSNMCSKASASG 236 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13411.2632.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13411.2632.1 >prot_L-elsbetiae_contig13411.2632.1 ID=prot_L-elsbetiae_contig13411.2632.1|Name=mRNA_L-elsbetiae_contig13411.2632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp TQNTAVHRSRLFPPFSDAGQAVIDDLHEKGKGVVCYISIGTVEDWRSDKGback to top mRNA from alignment at L-elsbetiae_contig13411:3041..4769- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13411.2632.1 ID=mRNA_L-elsbetiae_contig13411.2632.1|Name=mRNA_L-elsbetiae_contig13411.2632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1729bp|location=Sequence derived from alignment at L-elsbetiae_contig13411:3041..4769- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13411:3041..4769- >mRNA_L-elsbetiae_contig13411.2632.1 ID=mRNA_L-elsbetiae_contig13411.2632.1|Name=mRNA_L-elsbetiae_contig13411.2632.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig13411:3041..4769- (Laminarionema elsbetiae ELsaHSoW15)back to top |