mRNA_L-elsbetiae_contig1340.2621.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: D7FXA4_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA4_ECTSI) HSP 1 Score: 238 bits (607), Expect = 2.010e-68 Identity = 110/121 (90.91%), Postives = 112/121 (92.56%), Query Frame = 1 Query: 3028 RVRRTSRKKVKKPVWSQLRKACDRCTSKKVKCDGKEGCFQCSRAGATCHFSICRRSGPRDSNGHKTGTLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGCEYASKT 3390 R RR SRKK KKPVWSQLRKACDRCTSKKV+CDGKEGCFQCSR GATCHFSICRRSGPRDSNGHKTGT+GPIIPRDGYEKVTGRRGSCR SS CRF ADGQSKTEHYHCR PGCEYASKT Sbjct: 61 RPRRPSRKKTKKPVWSQLRKACDRCTSKKVRCDGKEGCFQCSRVGATCHFSICRRSGPRDSNGHKTGTIGPIIPRDGYEKVTGRRGSCRISSQCRFVSADGQSKTEHYHCRAPGCEYASKT 181
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: D7G066_ECTSI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G066_ECTSI) HSP 1 Score: 138 bits (347), Expect = 8.210e-30 Identity = 75/144 (52.08%), Postives = 86/144 (59.72%), Query Frame = 1 Query: 2977 AKQAKRRGVGGNGGTYRRVRRTSRKKVKKPVWSQLRKACDRCTSKKVKCDGK------EGCFQCSRAGATCHFSICRRSGPRDSNGHKTGTLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGCEYASKT 3390 A A+ RGV T R + RKK K VWSQ RKACDRCT KKV+CDG + C C RAG C F ICRRSGPRD +GHKT G I+ R+ +EKVT R G CRT + CRF DG EH+HCR C +A KT Sbjct: 490 AAPARNRGV----ATAASGRPSPRKKSKNLVWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACIFGICRRSGPRDEHGHKTAAAGVIMKRNDFEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKT 628
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: A0A6H5JPG2_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPG2_9PHAE) HSP 1 Score: 139 bits (350), Expect = 1.030e-29 Identity = 75/145 (51.72%), Postives = 88/145 (60.69%), Query Frame = 1 Query: 2977 AKQAKRRGVGGNGGTYRRVRRTSRKKVKKPVWSQLRKACDRCTSKKVKCDGK------EGCFQCSRAGATCHFSICRRSGPRDSNGHKTGTLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGCEYASKTM 3393 A A+ RGV T R + RKK K VWSQ RKACDRCT KKV+CDG + C C RAG C F ICRRSGPRD++GHKT G I+ R+ +EKVT R G CRT + CRF DG EH+HCR C +A KT+ Sbjct: 739 AAPARNRGV----ATAASGRPSPRKKSKNLVWSQFRKACDRCTDKKVRCDGSNPTGGFKACTPCKRAGEACLFGICRRSGPRDAHGHKTAAAGVIMKRNDFEKVTERLGQCRTKT-CRFVNKDGSFWREHFHCRVGDCSFAGKTL 878
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Match: K8YU74_NANGC (Tpa: zn 2cys6 transcription factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU74_NANGC) HSP 1 Score: 59.7 bits (143), Expect = 3.480e-5 Identity = 38/106 (35.85%), Postives = 53/106 (50.00%), Query Frame = 1 Query: 3076 QLRKACDRCTSKKVKCDGKEGCFQCSRAGATCHFSICRRSGPR-----DSNGHKTG--TLGPIIPRDGYEKVTGRRGSCRTSSPCRFAFADGQSKTEHYHCRTPGC 3372 +LR++CDRCTSKK++CDG C C R G CH+S RR+GP+ D + G + +IP ++ + GS R S A DGQ + T C Sbjct: 11 KLRRSCDRCTSKKIRCDGLAACQNCVRRGYACHYSERRRTGPKIRTAADDHPELQGLSSADGLIPWSN-DRPSSASGSERASRSASTAIDDGQVNPKLDDISTNSC 115 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1340.2621.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1340.2621.1 >prot_L-elsbetiae_contig1340.2621.1 ID=prot_L-elsbetiae_contig1340.2621.1|Name=mRNA_L-elsbetiae_contig1340.2621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1220bp MDGAQVSKTPPSLIAVPRRHSMEVLPAPLEGASVSLRKNDDGSSSSRQRYback to top mRNA from alignment at L-elsbetiae_contig1340:8115..16936+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1340.2621.1 ID=mRNA_L-elsbetiae_contig1340.2621.1|Name=mRNA_L-elsbetiae_contig1340.2621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=8822bp|location=Sequence derived from alignment at L-elsbetiae_contig1340:8115..16936+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1340:8115..16936+ >mRNA_L-elsbetiae_contig1340.2621.1 ID=mRNA_L-elsbetiae_contig1340.2621.1|Name=mRNA_L-elsbetiae_contig1340.2621.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=7320bp|location=Sequence derived from alignment at L-elsbetiae_contig1340:8115..16936+ (Laminarionema elsbetiae ELsaHSoW15)back to top |