mRNA_L-elsbetiae_contig13393.2615.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 157 bits (398), Expect = 2.390e-42 Identity = 82/137 (59.85%), Postives = 92/137 (67.15%), Query Frame = 2 Query: 11 RCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVV 421 R DAF AL QA EGGEKRWY ST ELQL SLD CRACRS TL VRV G TP SLWS P Q NT S+ R SRVP+VRA+ L W METLV+ A+IELW+ E L + G + +ASL V WP GL QLV+ Sbjct: 8 RSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQSSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVL 144
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 163 bits (412), Expect = 4.670e-40 Identity = 86/138 (62.32%), Postives = 95/138 (68.84%), Query Frame = 2 Query: 11 RCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRL-VAWPRGLRQLVV 421 RCLDAF AL QA EGGEKRWYASTLELQL SLD CRACR+ S L V V+ TPRSLWS QT NT SSRVP+VRA+ L W L ME L+R A+IELWTW E L L G+ +SL V WPRGL QLV+ Sbjct: 10 RCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTRSWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVL 147
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 135 bits (340), Expect = 3.140e-31 Identity = 72/137 (52.55%), Postives = 89/137 (64.96%), Query Frame = 2 Query: 11 RCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVV 421 RCLDAF AL Q EGGEKRWY STL+LQLASL+FC ACRS L V V+ TP +LWS L A S+RVP V+AV L W P E+ + SAS ELWT E L L+ ++ +A+L V WP+GL++LV+ Sbjct: 8 RCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWS-------LGQANPTAGTSTRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVM 137
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5JL88_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL88_9PHAE) HSP 1 Score: 124 bits (310), Expect = 2.070e-27 Identity = 69/153 (45.10%), Postives = 89/153 (58.17%), Query Frame = 2 Query: 68 RWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSE-----ARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVVGGALETSMAEXXXXXXXXXXAFGHSFNLPL 511 RW+ STL +QLASL+FCRA RS+ T+ + V+ PRSLW K QT +T G E ARP SRVP++RA L WGL METL++S ++ELWT + LHL G VS AS + P+ L QL S+ +FG FN P+ Sbjct: 4 RWFTSTLNIQLASLEFCRASRSIPTIALHVDSRIPRSLWDGRKSQTPSSTRGLEIRCWKARPLSRVPLIRASRLNWGLSMETLLQSTAVELWTGLKSLHLCGDVSDASPASMVQPQRLEQLEGNKDARDSVEAVPWPAFLQKLSFGFPFNRPI 156
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 124 bits (312), Expect = 5.310e-27 Identity = 72/177 (40.68%), Postives = 97/177 (54.80%), Query Frame = 2 Query: 2 GEGRCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSE----------------------------ARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVVGGALETSMA 448 G R DA A+ QA EG KRWY STLEL+LASL+ CRACR V T+ VRV+ +TP SLWS T +T S+ AR SSRVP+ +A+ L W LP E L++ ++ELWT E L LR ++S + L VAWP+ L++L + E +++ Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAIS 181
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 124 bits (311), Expect = 1.860e-26 Identity = 70/167 (41.92%), Postives = 91/167 (54.49%), Query Frame = 2 Query: 2 GEGRCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVVGGALETSMAEXXXXXXXXXXAFGHSFN 502 G +CLDAF AL QA +G EKRWY STLELQL SL+ C ACR V TL VRV+ TP SLW + T N + SSRVP+V+A L W LPM L + ++ E+ + C S+ASL WP+ L+++V + + A +FG FN Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVNTASWPASLQQL--SFGCGFN 169
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 120 bits (300), Expect = 4.320e-26 Identity = 70/150 (46.67%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 2 GEGRCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRG-LRQLVVGGALETSMA 448 G CL AF AL Q G EKRWYASTLELQL SL+FC ACR V TL VRV+ TPRSLWS K EA S+RVP V+A L W L ME L++++++EL + + + G S+ASL + W + L++LV + S A Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPASTA 162
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 110 bits (276), Expect = 3.180e-22 Identity = 69/171 (40.35%), Postives = 87/171 (50.88%), Query Frame = 2 Query: 2 GEGRCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVVGGALETSMAEXXXXXXXXXXAFGHSFNLPLL 514 G CLDAF AL QA +G KRWY STLELQL SL+FC ACRS + V++ TP SLWS K L EA SRVP V+A W LPME L+ ++ EL E G S+ S + W + L +L+ E S+ +FG FN P++ Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLWSPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYS--ERSVNSVSWPACLQELSFGDFFNQPII 193
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 105 bits (261), Expect = 5.000e-22 Identity = 61/139 (43.88%), Postives = 76/139 (54.68%), Query Frame = 2 Query: 2 GEGRCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLV 418 G G LD AL QA +G EKRWY STLELQL SL+ C ACRS L V V TP +LWS +T + E S+RVP V+A+ W LPM+ L + A+ E E G +AS+ V WP L++LV Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQRSPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLV 223
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 97.4 bits (241), Expect = 8.290e-19 Identity = 63/167 (37.72%), Postives = 87/167 (52.10%), Query Frame = 2 Query: 2 GEGRCLDAFTFALGQAREGGEKRWYASTLELQLASLDFCRACRSVSTLRVRVEGSTPRSLWSRPKPQTWLNTNGSEARPSSRVPIVRAVSLKWGLPMETLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVVGGALETSMAEXXXXXXXXXXAFGHSFN 502 G G C+DAF AL + +GGE+RWYASTLELQ SL+FC ACR V T ST +T G SR P+VRA SL W L M+ L++S ++EL + G S+A+L + W + L++LV+ L+T + +FG+ FN Sbjct: 15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPTSH-----ST--------------STVGRLVSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVL--ELDTPVITASWPASLQQLSFGYKFN 160 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13393.2615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13393.2615.1 >prot_L-elsbetiae_contig13393.2615.1 ID=prot_L-elsbetiae_contig13393.2615.1|Name=mRNA_L-elsbetiae_contig13393.2615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=316bp METLVRSASIELWTWCECLHLRGAVSSASLRLVAWPRGLRQLVVGGALETback to top mRNA from alignment at L-elsbetiae_contig13393:559..2095+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13393.2615.1 ID=mRNA_L-elsbetiae_contig13393.2615.1|Name=mRNA_L-elsbetiae_contig13393.2615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1537bp|location=Sequence derived from alignment at L-elsbetiae_contig13393:559..2095+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13393:559..2095+ >mRNA_L-elsbetiae_contig13393.2615.1 ID=mRNA_L-elsbetiae_contig13393.2615.1|Name=mRNA_L-elsbetiae_contig13393.2615.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1896bp|location=Sequence derived from alignment at L-elsbetiae_contig13393:559..2095+ (Laminarionema elsbetiae ELsaHSoW15)back to top |