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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Ec32 ortholog description | hypothetical protein |
Ec32 ortholog | Ec-06_009950.1 |
Exons | 3 |
Model size | 430 |
Cds size | 426 |
Stop | 0 |
Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622815510.9276237-CDS-L-elsbetiae_contig1339:22423..22514 | 1622815510.9276237-CDS-L-elsbetiae_contig1339:22423..22514 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1339 22424..22514 - |
1691682934.200262-CDS-L-elsbetiae_contig1339:22423..22514 | 1691682934.200262-CDS-L-elsbetiae_contig1339:22423..22514 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1339 22424..22514 - |
1622815511.067911-CDS-L-elsbetiae_contig1339:25190..25360 | 1622815511.067911-CDS-L-elsbetiae_contig1339:25190..25360 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1339 25191..25360 - |
1691682934.2100112-CDS-L-elsbetiae_contig1339:25190..25360 | 1691682934.2100112-CDS-L-elsbetiae_contig1339:25190..25360 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1339 25191..25360 - |
1622815511.1461892-CDS-L-elsbetiae_contig1339:26120..26285 | 1622815511.1461892-CDS-L-elsbetiae_contig1339:26120..26285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1339 26121..26285 - |
1691682934.2230074-CDS-L-elsbetiae_contig1339:26120..26285 | 1691682934.2230074-CDS-L-elsbetiae_contig1339:26120..26285 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig1339 26121..26285 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1339.2613.1 >prot_L-elsbetiae_contig1339.2613.1 ID=prot_L-elsbetiae_contig1339.2613.1|Name=mRNA_L-elsbetiae_contig1339.2613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=142bp
ASQVSLHSALHFSFVGLPSQAMGCIAFCRLWTAEDAAADADEITSERKTP LHLSKLEAKGEDALHKSVPRDEVVIQVKEVEQQGAAGLAAEKIPHAETIP EVPPTAQEISSATDVEEVSKDWAPSSGGSGGLTMTSQQAEAM back to topmRNA from alignment at L-elsbetiae_contig1339:22422..26285- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig1339.2613.1 ID=mRNA_L-elsbetiae_contig1339.2613.1|Name=mRNA_L-elsbetiae_contig1339.2613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3864bp|location=Sequence derived from alignment at L-elsbetiae_contig1339:22422..26285- (Laminarionema elsbetiae ELsaHSoW15) GCCAGTCAGGTGTCTCTGCACTCCGCCCTCCATTTTTCGTTCGTTGGTCT
CCCGTCCCAAGCCATGGGTTGCATCGCGTTCTGTAGGCTCTGGACGGCAG
AGGATGCCGCAGCTGATGCCGATGAGATCACAAGTGAACGTAAAACGCCG
CTGCATCTCTCTAAGGTGAAACACGGAAACACCCACACGACGCGTGGCTT
CCTGCTCAGTACAATGGCTTTTGGTGTAGCGGGGGACTAAATTAGGGGAG
TAGAAGGTCTGCCCAGGGCAAAACAAAGAGAGAAGGTGGCGCTTTCATGT
GTTGTCGTGTTCCGACGTTCCGACTGCGTAAGTTCAAATTTCAATTTGAA
AGTTGAACCATCTCGTCCCGAGCGGCTGAAGGAGATTTGATGAGAGAGCG
ACAGAGACTCTCGTTCGGCCTGGAGAGCTATGACATTGAGAATCAACTCA
GATTGCAGTTCTCTAGTGGTCCACTTCGGTTTAAGACCGGCTCTCACGGG
TACCAGAGACGATTTGCATCGTGTATCATTACGTCACCATGAGAGTGCCG
GGTTGATGGTCGAGTACATACAACGTGTTGCACGGCCGCCAACCTGTGTG
TACGTACTTCGCCTGCACAGAAAGGAAAGGCATGCATGGCGGTGAGAGCA
AAGAACGGGGAGGCATGCGCTCGGTGCGCGTCTGAAGTCGGCATCCTTCG
TTTTTCATCACAATATGCCTTTGAGACAGCACACGAGAAGCGCAGTGAAG
ATTGCTGACTCCTGGGATCAGAAGTGCTTCAAACTTCAAACGGGCATACC
TATCCCGCTGCTGCACACCTGCTTCTCTTACTATGCACGTGGCAGGCAGG
TGGCTCGACCATTAGATTGATAGCTGTATCAATCCCGTCTCGTTGACGCG
TTCGTTTGTCATATGTCAATTTCAGCTCGAGGCAAAGGGCGAAGATGCCC
TGCATAAAAGTGTCCCAAGAGATGAGGTTGTGATCCAGGTCAAGGAGGTG
GAGCAACAGGGCGCAGCGGGGTTGGCCGCTGAAAAAATTCCGCACGCCGA
AACGATCCCGGAGGTGCCGCCGACCGCACAAGAAATCTCCTCAGCGTGAG
TGTTCTCCCACAAGAAGATTTTATATTGATGCATTTATCTAGATAGACGT
GTAACCCTAGACTTGGGTTATGGGACTTGAAGCAGGTTTTGGTGACACAA
AAAGTGATTAAATAGAAATCAGTGAATCAAAAACAGAAAAGGAACCTAGC
CCACATGAGAGCCAACACTCCATAGGTTTCAAACGGTATCCCATTAAGTG
ACGTAATATTGGTTCAGTTAGAGTAAAAACACCTAAAATATCCGAAGAAT
TCAATATCTCCCTTGCGAAACTCAGCCAGGTCTGATTATTGAGACGCCCG
AATTTGTGCGGACCTGGGCTAGTCGGCACATCGGGACGATAACATGAACA
ACCGATATCGCCACATGGGGTATCGTAGCACAGCAGCAGCAGGGTTTTTA
TGCTTTGTTTCGTCTCCGGCAGCCTGCTACACCTGCCGCCGCTGCTGCCG
CCGCTGCTTGGCTGTTGCATTTGGGAGTTGGGGGTTATTTTTTATTTACG
AAATCGGTTTTGCTGTCTCGCTCTCATCTCTCATCCCGCACATCACATGA
CGCAGCATGCAAACCACACATATACACCCACACCACCAGCATAAGTATAT
ACATGTCTACAACAGTTCATCGCCGAACACCTCTTCGATTTCCGTCTACA
CACACCAGCAACCGGTGGTGTAGATCGATCTGCTTGCTGTTGGCGTTGGG
TATTATTACAAAGTAATCGAGCGCCAGGCGGGACTCTATCCGGCGGCCCC
CCGAGAGGTCGAGAAAAAGGAATGATTATATATTGTGTGATTACTAGTAT
AAATTTAGAGTGCTATACATTAGAGGAGTTCAGGGCCCGGGACAGCGCTA
TAAAGGAGAAAAAAGCTTCGAGCGAACAACAGCAGCGAACACCAGCAGTG
ATGTTTTGAAGGCCGAAGAAGCTTTCTAGTGTGCCAACAGACATCCCCAA
TCTGTTACCGGGCGGTGACACGGCTGCGGTGCGTGTCCTGCTGCTGGGTT
GACTTCTTTCTGCAAACAGAAGTCTTTCAGCGCAGAGAACAGAGAACCCG
CGCATCTGCCGCGGACCCGTATTTGTTTATATTAGTCCCGCCGCGTTTTC
TGAGCTGCTCGCCTTGCGGCCTGTGACGAGCCTAGTGCCAGAGGATTTAA
GGGTGCACCGCATAGTTGAAGTTGCGGGCAATAGACTGCTGGCTCTGATT
TATTCCTCTTTGATATCAGTACCATAAGAACACGTGTTTGGCACCGCAAT
TTCTATGGGTGTCGGGGTCCGTTTGACTGTCTCCAGCCCCATTTTCTTGA
AGGGTAACATCCTGGCTATCTTCGCGTGTCTGCTGTTTGGGCTGGTTCGC
AGGGCATGTGTGCCTTCGTTCGTTCAGCAAAACCCGACCAGGTTGACAGG
AAAAGGGGTGTTTTGTGACGGTTTGAAAGCACAAAGTTCTCGAGATCGAA
AGCTGCTGTGCACCGCTCCTGCCGTGCTCCGACTGTGTTCCTTCAAGGGC
CTTATAAAGGTTGCTCAGCCAAAGACCATGTCTCCAAAGACCTCGAGCGC
TCCATGGCCGGCCCTCGCTGCTGTCCACCCCAGTGTGTACACGCCCTCAC
TTTCGCGGACACACAAAAATGTAGTTTGCTCAGTTCAGACTAGGATCCAA
ACGGTCGACCGTCGTGCATATTGCTCTCTGCTCCGCTGCCAACAGTAAGA
GCTACCTCACGATAGTCAACCCCAAGGATTGACTGAGGAAGTTTGGTATC
AGTTCTCATGTCAAAGCGCAAACCCCGATTTTGCTGTGAGAGAGGGTAGC
TGGAGAGAGATCTACAGCATTTTCTCAAGTGTCGCTTCGGGCTCTCTCCT
GGAATCCCTACCCGGAATTATTAAGCTGTGCTGCGTGGTCCATCCTTAAG
GGTTCTCGGTCTTGTTTTTTTTTCACAACCCCACGTGCACACTGCCTAAG
GTACTCGCGTCACTTTTGTTTTCAACGACGAGTTGGAATCATCATCGTCA
CGCCTACCCCCAAGATGTTGATCGTCTACTCGCAGTCAAGCTTGCATTCC
AGGCTCGTTTGGTTTGGCACTCTTTTGTATGTATGTCATGTCACAGCAGT
GGCACCCTTTACATGATCGGGGAGAGGGGTTGTAAGCAATATGGATGAAG
AGCGATCCATAACCCAATTTTCCTCTTCGAACCAACCCGGCAAGTACGGC
CTGTTCATCAGAAGAAAAACAGGACATACATTACTGACTTCCTTCTAGGT
TCCTTCGCAAAACGGGGCCGCTGGGCTCGAAGAGAGAATCTCCGCCTCCG
CCCAAGCACGCCTTGAACAAGAGCGAGAAAGATAACGGTATCCTCGCACG
ATTATTGCTTCCTTGTCTCTCGTGTCCTTTGCCTCTGGGTCTTTGGACGG
GTGTATTAGGTATGTTGTGTTGTATGCTGTTTTCTTGACAGTCATATTTA
GTTGGCTGACGGGGCCCCCAGAAGAGAACTCTAAACCGCTGGAAGTCTTG
ATCAAACCCAGACAGAGATCGTGTACAGCGTACAGCTCTGCTACATAGCA
TTCCCCCCAACACTGTGTACATGTAGCTCGCACACACTACTGCAATTGCT
TACTCTCTCATACTTTTTCTATACCTTTTGCGGCACCATTGATTTACATA
CATCTGAATCGATGATACCAGGACCGATGTCGAGGAAGTGTCCAAGGACT
GGGCGCCTTCTTCGGGCGGCAGCGGCGGGCTGACGATGACGTCGCAGCAG
GCGGAGGCCATGAA back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig1339:22422..26285- >mRNA_L-elsbetiae_contig1339.2613.1 ID=mRNA_L-elsbetiae_contig1339.2613.1|Name=mRNA_L-elsbetiae_contig1339.2613.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=852bp|location=Sequence derived from alignment at L-elsbetiae_contig1339:22422..26285- (Laminarionema elsbetiae ELsaHSoW15) GCCAGTCAGGTGTCTCTGCACTCCGCCCTCCATTTTTCGTTCGTTGGTCT CCCGTCCCAAGCCATGGGTTGCATCGCGTTCTGTAGGCTCTGGACGGCAG AGGATGCCGCAGCTGATGCCGATGAGATCACAAGTGAACGTAAAACGCCG CTGCATCTCTCTAAGGCCAGTCAGGTGTCTCTGCACTCCGCCCTCCATTT TTCGTTCGTTGGTCTCCCGTCCCAAGCCATGGGTTGCATCGCGTTCTGTA GGCTCTGGACGGCAGAGGATGCCGCAGCTGATGCCGATGAGATCACAAGT GAACGTAAAACGCCGCTGCATCTCTCTAAGCTCGAGGCAAAGGGCGAAGA TGCCCTGCATAAAAGTGTCCCAAGAGATGAGGTTGTGATCCAGGTCAAGG AGGTGGAGCAACAGGGCGCAGCGGGGTTGGCCGCTGAAAAAATTCCGCAC GCCGAAACGATCCCGGAGGTGCCGCCGACCGCACAAGAAATCTCCTCAGC CTCGAGGCAAAGGGCGAAGATGCCCTGCATAAAAGTGTCCCAAGAGATGA GGTTGTGATCCAGGTCAAGGAGGTGGAGCAACAGGGCGCAGCGGGGTTGG CCGCTGAAAAAATTCCGCACGCCGAAACGATCCCGGAGGTGCCGCCGACC GCACAAGAAATCTCCTCAGCGACCGATGTCGAGGAAGTGTCCAAGGACTG GGCGCCTTCTTCGGGCGGCAGCGGCGGGCTGACGATGACGTCGCAGCAGG CGGAGGCCATGGACCGATGTCGAGGAAGTGTCCAAGGACTGGGCGCCTTC TTCGGGCGGCAGCGGCGGGCTGACGATGACGTCGCAGCAGGCGGAGGCCA TG back to top
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