mRNA_L-elsbetiae_contig1330.2558.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1330.2558.1
Unique NamemRNA_L-elsbetiae_contig1330.2558.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: D7FYZ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ0_ECTSI)

HSP 1 Score: 801 bits (2068), Expect = 4.900e-289
Identity = 398/468 (85.04%), Postives = 428/468 (91.45%), Query Frame = 2
Query:   74 LDLTRSDFLFKRTPASKIVLKKLLEGLLEASDEKGTIACAIPRPWYEKGALVYEAFRELSDADVEACPLVISYTSVSGGAQPRNKEGHMRNQQEHVLVVHRRGADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVTDESKRAALQTIIASAFHQAHSSGMFQSRRGGQEVVVGPKCLPTGLPPCITPARVHEALKAELQKEQDVLVASFAVAQAMSKTSHLLLRGDASEPKLVLKKPKRNSRS-RDIPDLLVWGDLVVNSSPNDAKQSLTTDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKSKADLDICCDIPLRGTRDKILQKVGFGADGSGGVKVRHVRNKPNATSAHTDNPVFISTNCGRIVGSDVFETSGVGGEAEE 1474
            +DLTR+DFLFKRTP SK  LK++L+G+LEA+DEKGT+ACAIPRPW+EKGALVY+AFRELSDADVEA PLVI YTSVSGGAQPRNKEGHMRNQQE VLVVHRRG+DGTTGFTCNKRVVVTDVFGHSQG VPHARHVI L+ LP GAPNGGSRTFFP  ACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYV DESKRAALQT IASAFH+AHSSGMFQSRRGGQEV VGP+CLP GLPP   P RV EALKAELQKE+DV  ASFAVAQA+SKTSHL+L+GD S PKLVLKKPKR+SRS RDI  LLVWGDL+V SSPN A QS+ +DEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVD+TCPIYWTRWNKKSKADLDICCDIP RGTR KIL KVGFG DGSGGVKVRHVRNKPNA S HTDNP++IST+CGRIVGSD+FE+S V GEA++
Sbjct:   44 VDLTRNDFLFKRTPTSKNALKEVLQGVLEATDEKGTVACAIPRPWFEKGALVYDAFRELSDADVEANPLVIYYTSVSGGAQPRNKEGHMRNQQELVLVVHRRGSDGTTGFTCNKRVVVTDVFGHSQGPVPHARHVIHLDNLPPGAPNGGSRTFFPSVACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVMDESKRAALQTNIASAFHKAHSSGMFQSRRGGQEVFVGPRCLPAGLPPSTAPGRVQEALKAELQKEEDVEAASFAVAQAVSKTSHLVLQGDPSNPKLVLKKPKRSSRSSRDISGLLVWGDLIVYSSPNAASQSMDSDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDKTCPIYWTRWNKKSKADLDICCDIPQRGTRVKILDKVGFGDDGSGGVKVRHVRNKPNAASTHTDNPLYISTSCGRIVGSDMFESSSVVGEADD 511          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5K708_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K708_9PHAE)

HSP 1 Score: 598 bits (1543), Expect = 2.370e-208
Identity = 313/476 (65.76%), Postives = 365/476 (76.68%), Query Frame = 2
Query:   74 LDLTRSDFLFKRTPASKIVLKKLLEGLLEASDEKGTIACAIPRPWYEKGALVYEAFRELSDA-DVEACPLVISYTSVSGGAQPRNKEGHMRNQQEHVLVVHRR--GADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVTDESKRAALQTIIASAFHQAHSSGMFQSRRGGQEVVVGPKCLPTGLPPCITPARVHEALKAELQKEQDVLVASFAVAQAMSKTSHLLLRGDASEPKLVLKKPKRNSRS-RDIPDLLVWGDLVVNSSPNDAKQSLTTDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKSKADLDICCDIPLRGTRDKILQKVGFGADGSGG--VKVRHVRNKPNATSAHTDNPVFISTNCGRIVGSDVFETSGVG---GEAEE 1474
            +DLTR DFL K TPAS  VLK  ++GL+E  DEKGTIACAIPRPWY KG L+  AF+E  D   ++  P+VISY SVSGGAQ ++ E   RNQQEHVL+VHR    A GT  FTCN+RVVV+DVFGHS+G +PHARHVIQLE LPAGA NG SRTFFPPTA QY IAR+TNAGDTVLG+GVE+TT   DAISRGRRVEFYVTD SKRA+LQ  I+S+FH+AHSSGMFQSRRGG+EVVVGP CLP GLPP   P RV EALKA L+KE DV  ASF VAQ ++K +HL L+GD   PKLV+KKP+R S++ +++ D+ VWG+L+V  SP  AK SLT +EVDEE+VRLLRIATNAQLQL LE GTERCTPEAALYLRV  TCP+ W R   K+KADLDI CDIP RG R  IL+      DGS G  VKVRHVRNKP+ TS + +  +FIST C RIVGS +F++   G   GE +E
Sbjct:  110 VDLTRHDFLLKDTPASINVLKNAVDGLMEVLDEKGTIACAIPRPWYFKGNLLVGAFKEFPDKLFIDPTPVVISYQSVSGGAQHKSHELLHRNQQEHVLMVHRAPPAAGGTVNFTCNRRVVVSDVFGHSRGNIPHARHVIQLENLPAGARNGSSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDVSKRASLQAKISSSFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSTVPERVSEALKAALEKEPDVPTASFTVAQTIAKRTHLTLQGDHHSPKLVMKKPRRASKAPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLTLESGTERCTPEAALYLRVAATCPVLWVRSESKTKADLDISCDIPQRGLRANILETFSSSGDGSSGGAVKVRHVRNKPSTTSIYKEEALFISTECRRIVGSLIFDSVVAGVQDGEEDE 585          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5JDB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDB1_9PHAE)

HSP 1 Score: 598 bits (1542), Expect = 2.290e-200
Identity = 306/463 (66.09%), Postives = 356/463 (76.89%), Query Frame = 2
Query:   74 LDLTRSDFLFKRTPASKIVLKKLLEGLLEASDEKGTIACAIPRPWYEKGALVYEAFRELSDA-DVEACPLVISYTSVSGGAQPRNKEGHMRNQQEHVLVVHRR--GADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVTDESKRAALQTIIASAFHQAHSSGMFQSRRGGQEVVVGPKCLPTGLPPCITPARVHEALKAELQKEQDVLVASFAVAQAMSKTSHLLLRGDASEPKLVLKKPKRNSRS-RDIPDLLVWGDLVVNSSPNDAKQSLTTDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKSKADLDICCDIPLRGTRDKILQKVGFGADGSGG--VKVRHVRNKPNATSAHTDNPVFISTNCGRIVGSDVFE 1444
            +DLTR DFLFK TPASK VLK  ++GL E  DEKGT ACAIPRPWY KG L+  AF+E  D   ++  P+VISY SVSGGAQ ++ E   RNQQEHVL+VHR    A GT  FTCN+RVVV+DVFGHS G +P ARHVIQLE LPAGAPNGGSRTFFPPTA QY IAR+TNAGDTVLG+GVE+TT   DAISRGRRVEFYVTDESKRA+LQ  I+S FH+AHSSGMFQSRRGG+EVVVGP CLP GLPP               +KE DVL AS+ VAQ ++KT+HL L+GD   PKLV+KKP+R S++ +++ D+ VWG+L+V  SP  AK SLT +EVDEE+VRLLRIATNAQLQLMLEPGTERCTPEAALYLRV  TCP++W RW  K+KADLDI CDIP RG R  IL       DGS G  V+VRHVRNKP+ATS + +  +F+ST C RIVGS +F+
Sbjct:  702 VDLTRQDFLFKDTPASKNVLKNAVDGLTEVLDEKGTNACAIPRPWYFKGNLLVGAFKEFPDKLFIDPTPVVISYQSVSGGAQHKSHELLHRNQQEHVLMVHRAPPAAGGTVNFTCNRRVVVSDVFGHSLGNIPQARHVIQLENLPAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSTVXXXXXXXXXXXXEKEPDVLTASYTVAQTIAKTTHLTLQGDHHSPKLVMKKPRRASKAPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVAATCPVFWVRWESKTKADLDISCDIPQRGLRANILASFSSSGDGSSGGAVRVRHVRNKPSATSNYKEEALFVSTECRRIVGSLMFD 1164          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5KE40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE40_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 4.800e-175
Identity = 264/409 (64.55%), Postives = 309/409 (75.55%), Query Frame = 2
Query:  236 AFRELSDA-DVEACPLVISYTSVSGGAQPRNKEGHMRNQQEHVLVVHRR--GADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVTDESKRAALQTIIASAFHQAHSSGMFQSRRGGQEVVVGPKCLPTGLPPCITPARVHEALKAELQKEQDVLVASFAVAQAMSKTSHLLLRGDASEPKLVLKKPKRNSR-SRDIPDLLVWGDLVVNSSPNDAKQSLTTDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKSKADLDICCDIPLRGTRDKILQKVGFGADGSGG--VKVRHVRNKPNATSAHTDNPVFISTNCGRIVGSDVFE 1444
            AF+E  +   ++  P+VISY SVSGGAQ ++ E   RNQQEHVL+VHR    A GT  FTCN+RVVV+DVFGHS+G +PHARHVIQLE LPAGAPNGGSRT FPPT  QY IAR+TNAGDTVLG+GVE+TT   DAISRGRRVEFYVTDESKRA+LQ  I+S FH+AHSSGMFQSRRGG+EVVVGP C P GLPP   P RV EALKA L+KE DVL AS+               GD   PKLV KKP+R S+  +++ D+ VWG+L+V  SP  AK SLT +EVDEE+VRLL+IATNAQLQLML+PGTERCTPEAALYLRV  TCP++W R   K+KADLDI CDIP RG R  IL+ +    DGS G  V VRHVRNKP+ATS + +  +F+ST C RIVGS +F+
Sbjct:    4 AFKEFPEKLFIDPTPVVISYQSVSGGAQHKSHELLHRNQQEHVLMVHRAPPAAGGTVNFTCNRRVVVSDVFGHSRGNIPHARHVIQLENLPAGAPNGGSRTVFPPTDSQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRGGKEVVVGPNCSPAGLPPSTVPERVSEALKAALEKEPDVLTASYT--------------GDHHSPKLVTKKPRRASKVPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLQIATNAQLQLMLKPGTERCTPEAALYLRVAATCPVFWVRSESKTKADLDISCDIPQRGLRANILETLSSSGDGSSGGAVSVRHVRNKPSATSNYKEEALFVSTECRRIVGSLMFD 398          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5KEI5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEI5_9PHAE)

HSP 1 Score: 478 bits (1231), Expect = 2.420e-161
Identity = 243/361 (67.31%), Postives = 286/361 (79.22%), Query Frame = 2
Query:  386 DGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVTDESKRAALQTIIASAFHQAHSSGMFQSRRGGQEVVVGPKCLPTGLPPCITPARV----HEALKAELQKEQDVLVASFAVAQAMSKTSHLLLRGDASEPKLVLKKPKRNSRS-RDIPDLLVWGDLVVNSSPNDAKQSLTTDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKSKADLDICCDIPLRGTRDKILQKVGFGADGSGG--VKVRHVRNKPNATSAHTDNPVFISTNCGRIVGSDVFET 1447
            + T     + RVVV+DVFGHS G +PHARHVIQLE LPAGAPNGGSRTFFPPTA QY IAR+TNAGDTVLG+GVE+TT   DAISRGRRVEFYVTDESKRA+LQ  I+S+FH+AHSSGMFQSRRGG+EVVVGP CLP GLPP   P RV    H  LKA L+KE DVL AS+ VAQ ++KT+HL L+GD   PKLV+KKP+R S++ +++ D+ VWG+L+V  SP  AK SLT +EVDEE+VRLLRIATNAQLQLMLEPGTERCTPEAALYLRV  TCP++W R   K+KADLDI CDIP RG R  IL+ V    DGS G  V+V HVRNKP+ATS + +  +F+ST C RIVGS +F++
Sbjct:  199 ESTVEVDTSIRVVVSDVFGHSLGYIPHARHVIQLENLPAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSSFHKAHSSGMFQSRRGGKEVVVGPNCLPAGLPPSNVPERVSVAAHSTLKAALEKEPDVLTASYTVAQTIAKTTHLTLQGDHHSPKLVMKKPRRASKAPKEVSDIPVWGELIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVAATCPVFWVRSESKTKADLDISCDIPQRGLRANILETVSSSGDGSSGSAVRVCHVRNKPSATSNYKEEALFVSTECRRIVGSLMFDS 559          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5JYC2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC2_9PHAE)

HSP 1 Score: 468 bits (1203), Expect = 1.140e-158
Identity = 244/357 (68.35%), Postives = 283/357 (79.27%), Query Frame = 2
Query:   74 LDLTRSDFLFKRTPASKIVLKKLLEGLLEASDEKGTIACAIPRPWYEKGALVYEAFRELSDA-DVEACPLVISYTSVSGGAQPRNKEGHMRNQQEHVLVVHRR--GADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTTAPVDAISRGRRVEFYVTDESKRAALQTIIASAFHQAHSSGMFQSRRGGQEVVVGPKCLPTGLPPCITPARVHEALKAELQKEQD---VLVASFAVAQAMSKTSHLLLRGDASEPKLVLKKPKRNSRSR-DIPDLLVWGDLVVNSSPNDAKQSLTTDEVDEEFVRLLRIATNA 1123
            +DLTR DFLFK TPASK VLK  +EGL+E  DEKGTIACAIPRPWY KG L+  AF+E  D   ++  P+VISY SVSGGAQ ++ E   RNQQEHVL+VHR    A GT  FTCN+RVVV+DVFGHS+G +PHARHVIQLE LPAGAPNGGSRTFFPPTA QY IAR+TNAGDTVLG+GVE+TT   DAISRGRRVEFYVTDESKRA+LQ  I+S FH+AHSSGMFQSRR G+EVVVGP CLP GLPP   P RV  ALKA L+KE D   VL AS+ VAQ ++KT+HL L+GD   PKL+ KKP+R S++R ++ D+ VWG+L+V  S   AK SLT +EVDEE+VRLLRIATNA
Sbjct:  110 VDLTRQDFLFKDTPASKNVLKNAVEGLMEVLDEKGTIACAIPRPWYFKGNLLVGAFKEFPDKLFIDPTPVVISYQSVSGGAQHKSHELLHRNQQEHVLMVHRAPPAAGGTVNFTCNRRVVVSDVFGHSRGNIPHARHVIQLENLPAGAPNGGSRTFFPPTASQYFIARFTNAGDTVLGVGVESTTVAEDAISRGRRVEFYVTDESKRASLQAKISSTFHKAHSSGMFQSRRVGKEVVVGPNCLPAGLPPSTVPERVSGALKAALEKEPDEPDVLTASYTVAQTIAKTTHLTLQGDHHSPKLMTKKPRRASKARKEVSDIPVWGELIVYPSAQAAKDSLTQEEVDEEYVRLLRIATNA 466          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5JSN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN8_9PHAE)

HSP 1 Score: 296 bits (758), Expect = 4.370e-95
Identity = 141/165 (85.45%), Postives = 154/165 (93.33%), Query Frame = 2
Query:   74 LDLTRSDFLFKRTPASKIVLKKLLEGLLEASDEKGTIACAIPRPWYEKGALVYEAFRELSDADVEACPLVISYTSVSGGAQPRNKEGHMRNQQEHVLVVHRRGADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIAR 568
            +DLTR+DFLFKRTP SK  LK++L+G+LEA+DEKGT+ACAIPRPW+EKGALVY+AFRELSDADVEA PLVISYTSVSGGAQPR+KEGHMRNQQE VLVVHRRG+DGTTGFTCNKRVVVTDVFGHSQG VPHARHVI L+ LP GAPNGGSRTFFP  ACQYLIAR
Sbjct:   46 VDLTRNDFLFKRTPTSKNALKEVLQGVLEATDEKGTVACAIPRPWFEKGALVYDAFRELSDADVEANPLVISYTSVSGGAQPRHKEGHMRNQQELVLVVHRRGSDGTTGFTCNKRVVVTDVFGHSQGPVPHARHVIHLDNLPPGAPNGGSRTFFPSVACQYLIAR 210          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5K9C3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9C3_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 2.220e-79
Identity = 135/238 (56.72%), Postives = 167/238 (70.17%), Query Frame = 2
Query:  740 MFQSRRGGQEVVVGPKCLPTGLPPCITPARVHEALKAELQKEQDVLVASFAVAQAMSKTSHLLLRGDASEPKLVLKKPKRNSRS-RDIPDLLVWGDLVVNSSPNDAKQSLTTDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKSKADLDICCDIPLRGTRDKILQKVGFGADGSGG--VKVRHVRNKPNATSAHTDNPVFISTNCGRIVGSDVFE 1444
            MFQSRRGG+EVVVGP CLP GLPP               +KE DVL AS+ VAQ ++KT+HL L+GD   PKLV+KKP+R S++ +++ ++ VWG+ +V  SP  AK SLT +EVDEE+VRLLRIATNAQLQLMLEPGTE       LY RV  TCP++W R   K+KADLDI CDIP RG R  IL+      DGS G  V+VRHVRNKP+ATS + +  +F+ST C RIVGS +F+
Sbjct:    1 MFQSRRGGKEVVVGPNCLPAGLPPSTVXXXXXXXXXXXXEKEPDVLTASYTVAQTIAKTTHLTLQGDHHSPKLVMKKPRRASKAPKEVSNIPVWGESIVYPSPQAAKDSLTQEEVDEEYVRLLRIATNAQLQLMLEPGTE------PLYWRVAATCPVFWVRSESKTKADLDISCDIPQRGLRANILETFSSSGDGSSGGAVRVRHVRNKPSATSNYKEEALFVSTECRRIVGSLMFD 232          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5JMW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMW0_9PHAE)

HSP 1 Score: 248 bits (634), Expect = 2.010e-77
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 2
Query: 1064 LTTDEVDEEFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKSKADLDICCDIPLRGTRDKILQKVGFGADGSGGVKVRHVRNKPNATSAHTDNPVFISTNCGRIVGSDVFETSGVGGEAEE 1474
            + +DEVDEEFVRLLRIATNAQLQLML+PGTERCTPEAALYLRVD+TCPIYWTRWNKKSKADLDICCDIP RGTR KIL KVGFG DGSGGVKVRHVRNKPNA S HTDNP++IST+CGRIVGSD+FE+S V GEA++
Sbjct:    1 MDSDEVDEEFVRLLRIATNAQLQLMLDPGTERCTPEAALYLRVDKTCPIYWTRWNKKSKADLDICCDIPQRGTRVKILDKVGFGDDGSGGVKVRHVRNKPNAASTHTDNPLYISTSCGRIVGSDMFESSSVVGEADD 137          
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Match: A0A6H5K803_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K803_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 1.390e-65
Identity = 127/231 (54.98%), Postives = 143/231 (61.90%), Query Frame = 2
Query:   74 LDLTRSDFLFKRTPASKIVLKKLLEGLLEASDEKGTIACAIPRPWYEKGALVYEAFRELSDAD-----------------------------------------------VEACPLVISYTSVSGGAQPRNKEGHMRNQQEHVLVVHRR--GADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQLETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTT 619
            +DLTR DFLFK TPASK VLK  +EGL+E  DEKGTIACAIPRPWY KG L+                                                          ++  P+VISY SVSGGAQ ++ E   RNQQEHVL+VHR    A GT  FTCN+RVVV+DVFGHS G +PHARHVIQLE LPAGAPNGGSRT FPPTA QY IAR+TNAGDTVLG+GVE+TT
Sbjct:  295 VDLTRQDFLFKDTPASKNVLKNAVEGLMEVLDEKGTIACAIPRPWYFKGNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPDKLFIDPTPVVISYQSVSGGAQHKSHELLHRNQQEHVLMVHRAPPAAGGTVNFTCNRRVVVSDVFGHSLGNIPHARHVIQLENLPAGAPNGGSRTCFPPTASQYFIARFTNAGDTVLGVGVESTT 525          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1330.2558.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FYZ0_ECTSI4.900e-28985.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K708_9PHAE2.370e-20865.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDB1_9PHAE2.290e-20066.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KE40_9PHAE4.800e-17564.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEI5_9PHAE2.420e-16167.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JYC2_9PHAE1.140e-15868.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSN8_9PHAE4.370e-9585.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9C3_9PHAE2.220e-7956.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMW0_9PHAE2.010e-7785.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K803_9PHAE1.390e-6554.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1330contigL-elsbetiae_contig1330:9132..12175 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-19_003030.2
Exons6
Model size1501
Cds size1164
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815505.751896-CDS-L-elsbetiae_contig1330:9131..96981622815505.751896-CDS-L-elsbetiae_contig1330:9131..9698Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 9132..9698 -
1691682931.3302333-CDS-L-elsbetiae_contig1330:9131..96981691682931.3302333-CDS-L-elsbetiae_contig1330:9131..9698Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 9132..9698 -
1622815505.763902-CDS-L-elsbetiae_contig1330:9924..101101622815505.763902-CDS-L-elsbetiae_contig1330:9924..10110Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 9925..10110 -
1691682931.3414176-CDS-L-elsbetiae_contig1330:9924..101101691682931.3414176-CDS-L-elsbetiae_contig1330:9924..10110Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 9925..10110 -
1622815505.773515-CDS-L-elsbetiae_contig1330:10498..106791622815505.773515-CDS-L-elsbetiae_contig1330:10498..10679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 10499..10679 -
1691682931.3540075-CDS-L-elsbetiae_contig1330:10498..106791691682931.3540075-CDS-L-elsbetiae_contig1330:10498..10679Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 10499..10679 -
1622815505.7827747-CDS-L-elsbetiae_contig1330:10924..111111622815505.7827747-CDS-L-elsbetiae_contig1330:10924..11111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 10925..11111 -
1691682931.364387-CDS-L-elsbetiae_contig1330:10924..111111691682931.364387-CDS-L-elsbetiae_contig1330:10924..11111Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 10925..11111 -
1622815505.7939942-CDS-L-elsbetiae_contig1330:11353..113961622815505.7939942-CDS-L-elsbetiae_contig1330:11353..11396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 11354..11396 -
1691682931.375536-CDS-L-elsbetiae_contig1330:11353..113961691682931.375536-CDS-L-elsbetiae_contig1330:11353..11396Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1330 11354..11396 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815505.8060882-UTR-L-elsbetiae_contig1330:11396..115001622815505.8060882-UTR-L-elsbetiae_contig1330:11396..11500Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1330 11397..11500 -
1691682931.3855195-UTR-L-elsbetiae_contig1330:11396..115001691682931.3855195-UTR-L-elsbetiae_contig1330:11396..11500Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1330 11397..11500 -
1622815505.817669-UTR-L-elsbetiae_contig1330:11942..121751622815505.817669-UTR-L-elsbetiae_contig1330:11942..12175Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1330 11943..12175 -
1691682931.3944008-UTR-L-elsbetiae_contig1330:11942..121751691682931.3944008-UTR-L-elsbetiae_contig1330:11942..12175Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1330 11943..12175 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1330.2558.1prot_L-elsbetiae_contig1330.2558.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1330 9132..11396 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1330.2558.1

>prot_L-elsbetiae_contig1330.2558.1 ID=prot_L-elsbetiae_contig1330.2558.1|Name=mRNA_L-elsbetiae_contig1330.2558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=388bp
MRNQQEHVLVVHRRGADGTTGFTCNKRVVVTDVFGHSQGTVPHARHVIQL
ETLPAGAPNGGSRTFFPPTACQYLIARYTNAGDTVLGIGVETTTAPVDAI
SRGRRVEFYVTDESKRAALQTIIASAFHQAHSSGMFQSRRGGQEVVVGPK
CLPTGLPPCITPARVHEALKAELQKEQDVLVASFAVAQAMSKTSHLLLRG
DASEPKLVLKKPKRNSRSRDIPDLLVWGDLVVNSSPNDAKQSLTTDEVDE
EFVRLLRIATNAQLQLMLEPGTERCTPEAALYLRVDQTCPIYWTRWNKKS
KADLDICCDIPLRGTRDKILQKVGFGADGSGGVKVRHVRNKPNATSAHTD
NPVFISTNCGRIVGSDVFETSGVGGEAEEEEEEEVEG*
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mRNA from alignment at L-elsbetiae_contig1330:9132..12175-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1330.2558.1 ID=mRNA_L-elsbetiae_contig1330.2558.1|Name=mRNA_L-elsbetiae_contig1330.2558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3044bp|location=Sequence derived from alignment at L-elsbetiae_contig1330:9132..12175- (Laminarionema elsbetiae ELsaHSoW15)
TCAAGGAACACGGTCATCCACGGCGGGCAACTGTTCGCCCCACGCACCAA CGAGTAGCTAGGCGGCTCTCCACTTAGACCTCACGCGCAGCGACTTCTTG TTCAAGCGGACGCCAGCCTCGAAGATCGTGTTGAAGAAGTTGCTTGAGGG CCTTCTCGAGGCTTCGGACGAGAAAGGGACGATTGCATGCGCGATCCCTC GTCCTTGGTATGAGAAAGGCGCTCTGGTGTACGGTACGTGACCTTTTGTG AGCGACGCTACGATAGGGGGTTGCTTCGCGAAGCGACAAGCGATCACTTT TTGGTTGATGCTTTGTCGTCGCTTTTTGGGCTGTAGAGGTCGAGTATTCA AATATGACCCTCGGAGGAGCTTGTCTATGTGCGGCGAAATAATGAAACAA TATTCTTTGCTGAAGCGAGTTCAAGGTCGCACGCCCGATTCGCTCGAATA AACATGCGGGAGTTGTGTGGTCAACGTGAACTCGAGAGTGCCCCCCCTAC CTCCGCATCTCTCTCGTGTCTGTCTGTAGCGAGTTCTCGACGCGTGTAGT ACTCTTTTTCTCCAGCTTCTTCTCTCGTTTACATATTGCGTGGCAACTGG TGAGCCTGCTCAACATCAAATCGTCATGATATCTTCTTGCCTTTCCCGTA CATCTACATCCATCCGTGTCTGCAGAGGCCTTCAGGGAGCTCAGCGATGC GGATGTCGAAGCTTGTCCACTCGTCATCTCCTACACGAGCGTGAGCGGGG GCGCCCAGCCGAGGAACAAGGAAGGCCACATGCGGAACCAACAAGAGCAT GTTCTTGTGGTGCACCGCAGAGGTGAGTCGCACTATGGTATGGGTTGGGC GTATTTGGCCCGACCATTTATGGTGTCTGGGTGCAGGTGTAGAATAGCTT GTAGCTTGACACATGGAAATCTTCCACAGTTCTTCGTTACCGATCGCGTA TTTGCTCACCCATCGTTTAGAGGTGTATCATATTTATTTTCTTCCCATAT TCCACCACATGACAGTTTAAAAGACTGGCGCACTCACGTTCGCCCCTATC GTGGCACCTCTCAGGTGCAGATGGTACGACGGGATTCACGTGCAACAAGC GTGTTGTGGTAACAGACGTTTTCGGTCACTCCCAAGGTACTGTCCCGCAT GCGCGACACGTCATCCAGTTGGAAACCTTGCCTGCAGGGGCACCCAACGG GGGGTCCCGAACGTTCTTCCCTCCTACGGCGTGTCAGTATTTGATCGCGA GGTACGTACCGCGTTGATGGCAGGCGATTGAAACCTCTTTTAAACCTCTT TCACAACCCTTGGTGATGGCGTCCTAGTTATGTAACTCAACGTCCTTCTG GAACGCGACCAGAACAAGAAGGCTATTCTTCATCTCCGATATCGGCCGGT AACCCGATTGGCCGTGCTCCTCTCAGCAACCCCACGTGTGATCGACATTG GTACATGTTATCGTACCACTGCCTCCTGTCCGCGAATTCGAAACAGATAC ACCAACGCCGGCGACACAGTTCTAGGAATTGGAGTGGAAACCACTACAGC TCCAGTGGATGCCATCTCGCGAGGGCGCCGAGTCGAATTTTATGTGACGG ATGAGTCGAAGCGCGCCGCTCTGCAGACCATCATCGCCTCGGCGTTTCAC CAGGCGCACAGCTCGGGCATGTTTCAGGTGGGCCGCCCCCTTTTCTTGTT GCACGGTGCAGAGATGTTGCTCTTTGCGTCTTGCGTTGTGTCATGTCGCG TCGTTTGTGTGTGCACTGGTTAATGCTCTTGTTGGCTAATTCGGGATCAC TCGGTTGATCTCCCCATTTTTTTTTCTCTTCCGAGTGGTATGTGACCTAT TTTTGATTTTGCACCAGCGAGACGCATCACTAGTTTTTGTGTAGAGTCGC AGCGTGTGTATGTACGTACTTTATTATTCCCAGGGGTTTCCTTTCGGCGA TTAGTGCGCCTAGTTGAGTTACCATGGCCTCCCACGGATGTTTTGGAATG TAGAGCTAATAATGTGAGAAACAACAACCGTCATGATTATGCATCGCTCG ATGCTTGCCGTTCAGAGCCGACGTGGAGGGCAAGAGGTCGTGGTTGGTCC GAAGTGCTTACCCACTGGCCTCCCACCATGCATTACACCCGCGCGGGTGC ACGAGGCCCTCAAAGCGGAACTACAGAAGGAACAAGACGTTCTTGTGGCC TCGTTCGCCGTGGCGCAGGCGATGTCCAAGACTTCCCACCTCCTCCTACG GGTCATAACGTTTTACACATCGCGAGTGTCCGTCGCCCGAGTTCGTACCC TTCGACCATACGTATCGAAAACGTTATTCGCTGGCGGTTTTCATTATTTT ACGTCTGTGTGATGTCTAGTTTTTTGTTTCCCGCCTTCGCTGCTTGGAAA CAAACCGCTCTGACACTCAACATCTTCCTCGAAATATCTACCGCCCTCAT GTCCTCGCCCTCCCCCCGTGCGTACAGGGTGACGCCTCCGAGCCCAAGCT GGTGCTCAAGAAGCCGAAGAGGAACAGTAGGTCCAGAGACATACCGGACT TACTTGTGTGGGGTGATCTCGTAGTAAACTCGTCCCCCAATGACGCAAAG CAATCGTTGACCACAGACGAAGTCGACGAAGAGTTTGTGCGTCTCCTTCG GATCGCTACCAACGCGCAGCTTCAGCTTATGCTTGAACCCGGTACAGAGC GATGCACTCCTGAGGCCGCGTTGTACTTGAGGGTAGACCAGACGTGTCCC ATCTATTGGACTAGGTGGAACAAAAAGTCAAAGGCGGACTTAGACATCTG CTGTGACATCCCTCTGCGTGGCACTCGGGATAAGATTCTCCAAAAGGTCG GGTTTGGTGCTGACGGTAGTGGTGGGGTGAAGGTCCGTCATGTTCGAAAC AAGCCGAACGCAACGAGCGCCCATACGGACAATCCCGTGTTCATTAGCAC GAACTGTGGTCGAATCGTCGGGTCGGACGTGTTTGAAACTTCCGGTGTAG GTGGTGAAGCGGAGGAGGAGGAGGAGGAGGAGGTAGAGGGTTGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1330:9132..12175-

>mRNA_L-elsbetiae_contig1330.2558.1 ID=mRNA_L-elsbetiae_contig1330.2558.1|Name=mRNA_L-elsbetiae_contig1330.2558.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2328bp|location=Sequence derived from alignment at L-elsbetiae_contig1330:9132..12175- (Laminarionema elsbetiae ELsaHSoW15)
ATGCGGAACCAACAAGAGCATGTTCTTGTGGTGCACCGCAGAGATGCGGA
ACCAACAAGAGCATGTTCTTGTGGTGCACCGCAGAGGTGCAGATGGTACG
ACGGGATTCACGTGCAACAAGCGTGTTGTGGTAACAGACGTTTTCGGTCA
CTCCCAAGGTACTGTCCCGCATGCGCGACACGTCATCCAGTTGGAAACCT
TGCCTGCAGGGGCACCCAACGGGGGGTCCCGAACGTTCTTCCCTCCTACG
GCGTGTCAGTATTTGATCGCGAGGTGCAGATGGTACGACGGGATTCACGT
GCAACAAGCGTGTTGTGGTAACAGACGTTTTCGGTCACTCCCAAGGTACT
GTCCCGCATGCGCGACACGTCATCCAGTTGGAAACCTTGCCTGCAGGGGC
ACCCAACGGGGGGTCCCGAACGTTCTTCCCTCCTACGGCGTGTCAGTATT
TGATCGCGAGATACACCAACGCCGGCGACACAGTTCTAGGAATTGGAGTG
GAAACCACTACAGCTCCAGTGGATGCCATCTCGCGAGGGCGCCGAGTCGA
ATTTTATGTGACGGATGAGTCGAAGCGCGCCGCTCTGCAGACCATCATCG
CCTCGGCGTTTCACCAGGCGCACAGCTCGGGCATGTTTCAGATACACCAA
CGCCGGCGACACAGTTCTAGGAATTGGAGTGGAAACCACTACAGCTCCAG
TGGATGCCATCTCGCGAGGGCGCCGAGTCGAATTTTATGTGACGGATGAG
TCGAAGCGCGCCGCTCTGCAGACCATCATCGCCTCGGCGTTTCACCAGGC
GCACAGCTCGGGCATGTTTCAGAGCCGACGTGGAGGGCAAGAGGTCGTGG
TTGGTCCGAAGTGCTTACCCACTGGCCTCCCACCATGCATTACACCCGCG
CGGGTGCACGAGGCCCTCAAAGCGGAACTACAGAAGGAACAAGACGTTCT
TGTGGCCTCGTTCGCCGTGGCGCAGGCGATGTCCAAGACTTCCCACCTCC
TCCTACGGAGCCGACGTGGAGGGCAAGAGGTCGTGGTTGGTCCGAAGTGC
TTACCCACTGGCCTCCCACCATGCATTACACCCGCGCGGGTGCACGAGGC
CCTCAAAGCGGAACTACAGAAGGAACAAGACGTTCTTGTGGCCTCGTTCG
CCGTGGCGCAGGCGATGTCCAAGACTTCCCACCTCCTCCTACGGGGTGAC
GCCTCCGAGCCCAAGCTGGTGCTCAAGAAGCCGAAGAGGAACAGTAGGTC
CAGAGACATACCGGACTTACTTGTGTGGGGTGATCTCGTAGTAAACTCGT
CCCCCAATGACGCAAAGCAATCGTTGACCACAGACGAAGTCGACGAAGAG
TTTGTGCGTCTCCTTCGGATCGCTACCAACGCGCAGCTTCAGCTTATGCT
TGAACCCGGTACAGAGCGATGCACTCCTGAGGCCGCGTTGTACTTGAGGG
TAGACCAGACGTGTCCCATCTATTGGACTAGGTGGAACAAAAAGTCAAAG
GCGGACTTAGACATCTGCTGTGACATCCCTCTGCGTGGCACTCGGGATAA
GATTCTCCAAAAGGTCGGGTTTGGTGCTGACGGTAGTGGTGGGGTGAAGG
TCCGTCATGTTCGAAACAAGCCGAACGCAACGAGCGCCCATACGGACAAT
CCCGTGTTCATTAGCACGAACTGTGGTCGAATCGTCGGGTCGGACGTGTT
TGAAACTTCCGGTGTAGGTGGTGAAGCGGAGGAGGAGGAGGAGGAGGAGG
TAGAGGGTTGAGGTGACGCCTCCGAGCCCAAGCTGGTGCTCAAGAAGCCG
AAGAGGAACAGTAGGTCCAGAGACATACCGGACTTACTTGTGTGGGGTGA
TCTCGTAGTAAACTCGTCCCCCAATGACGCAAAGCAATCGTTGACCACAG
ACGAAGTCGACGAAGAGTTTGTGCGTCTCCTTCGGATCGCTACCAACGCG
CAGCTTCAGCTTATGCTTGAACCCGGTACAGAGCGATGCACTCCTGAGGC
CGCGTTGTACTTGAGGGTAGACCAGACGTGTCCCATCTATTGGACTAGGT
GGAACAAAAAGTCAAAGGCGGACTTAGACATCTGCTGTGACATCCCTCTG
CGTGGCACTCGGGATAAGATTCTCCAAAAGGTCGGGTTTGGTGCTGACGG
TAGTGGTGGGGTGAAGGTCCGTCATGTTCGAAACAAGCCGAACGCAACGA
GCGCCCATACGGACAATCCCGTGTTCATTAGCACGAACTGTGGTCGAATC
GTCGGGTCGGACGTGTTTGAAACTTCCGGTGTAGGTGGTGAAGCGGAGGA
GGAGGAGGAGGAGGAGGTAGAGGGTTGA
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