mRNA_L-elsbetiae_contig1327.2540.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A6H5JE22_9PHAE (J domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE22_9PHAE) HSP 1 Score: 316 bits (810), Expect = 7.520e-107 Identity = 155/181 (85.64%), Postives = 166/181 (91.71%), Query Frame = 2 Query: 2 ANHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDERMTDPGFRHRAEYRRRQQRGAPAGGQQSGGRRSYAPPRGRTQMPPILRAFEFATHPRVLMIGIPIACVGYMVFGDHGSEEPSSSVKVDAWLNPSSQRWETPAPWDEEYRQRRHLVQKVDRSIVHDARKR 544 A HGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDERM DP FRHR EYR+RQ G P G ++GGRRSYAPPRG T+MPPILRAFEFATHPRVLM+GIP+ACVGYM+FGDH SE P SSVKVDAWLNPS+QRWETPAPWDEE+R+RRHLVQKVDRSIVH+A KR Sbjct: 67 ATHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDERMADPAFRHRTEYRQRQG-GGPEGAHRNGGRRSYAPPRGHTRMPPILRAFEFATHPRVLMVGIPLACVGYMIFGDHESEVPGSSVKVDAWLNPSTQRWETPAPWDEEFRKRRHLVQKVDRSIVHEAGKR 246
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: D7G772_ECTSI (Heat shock protein 40 like protein/ DnaJ domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G772_ECTSI) HSP 1 Score: 202 bits (515), Expect = 1.560e-63 Identity = 102/120 (85.00%), Postives = 109/120 (90.83%), Query Frame = 2 Query: 2 ANHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDERMTDPGFRHRAEYRRRQQRGAPAGGQQSGGRRSYAPPRGRTQMPPILRAFEFATHPRVLMIGIPIACV 361 A H TIREAYLRLVKKHHPDVSKGAQSE+QFKAIASAWEVMGDKSKRALYDERM DP FRHR EYR+RQ GAP G Q++GGRRSYAPPRG T+MPPILRAFE ATHPRVLM+GIP+ACV Sbjct: 20 ATHETIREAYLRLVKKHHPDVSKGAQSEDQFKAIASAWEVMGDKSKRALYDERMADPAFRHRTEYRQRQG-GAPGGAQRTGGRRSYAPPRGHTRMPPILRAFELATHPRVLMVGIPLACV 138
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A4D9DC63_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC63_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 5.570e-14 Identity = 57/172 (33.14%), Postives = 82/172 (47.67%), Query Frame = 2 Query: 17 IREAYLRLVKKHHPD--VSKGAQSEEQFKAIASAWEVMGDKSKRALYDERMT-----------DPGFRHRAEYRRRQQRGAPAGGQQSGGRRSYAPPRGRTQMPPILRAF---EFATHPRVLMIGIPIACVGYMVFGDHGSEEPSSSVKVDAWLNPSSQRWETPAPWDEEYR 484 I+ Y +L HPD + + S E+FKA++ A++V+ D +R + DE + D GF R +G RR +PP R RAF E A PRVL++GI +A + Y+ G SS + V AW N ++RWETPAPW+ +YR Sbjct: 25 IKARYRQLAMDLHPDRCAAGDSSSVERFKAVSEAYKVLSDSGQRRILDEYLEGRRFAGARLRGDEGFLDRL----------------AGIRRPRSPPGSRKGGFSSSRAFHLVEIALSPRVLVMGIGLAFMTYIALGPREDPGHSSDLLVPAWYNQRTKRWETPAPWNPDYR 180
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A448ZEQ5_9STRA (J domain-containing protein (Fragment) n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEQ5_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 4.920e-10 Identity = 56/180 (31.11%), Postives = 83/180 (46.11%), Query Frame = 2 Query: 2 ANHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDERMTDPGFRHRAEYRRRQQRGAPAGGQQSGGRRSYAPPRGRTQMPPILRAFEFATHPRVLMIGIPIACVGYMVFGDHGSEEPSSSVK-----VDAWLNPSSQRWETPAPWDEEYRQRRHLVQKVDRSIV 526 A H I+ A+ L K HPD+++ E FKA++ A V+ D R YD + + + + GA G GRR+ APP R + L + R + G+ A V V G S+ P V+AW NPS+ R+E PAPWD+EY++ + ++ V R V Sbjct: 302 ATHDAIKNAFRELSLKFHPDLNQEHSCGEAFKAVSGAHSVLADPVARKNYDRLLAEDSW---------WREGA---GANRAGRRTRAPPP-RPKSHGFLGTLANPRYFRFGLAGLGGALVVGSVLGTISSKRPDYECHHCEPLVEAWKNPSTGRYEQPAPWDKEYQKIKPKLEMVPREKV 468
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A345M2Z2_9GAMM (Curved DNA-binding protein n=43 Tax=Bacteria TaxID=2 RepID=A0A345M2Z2_9GAMM) HSP 1 Score: 65.1 bits (157), Expect = 6.800e-9 Identity = 33/58 (56.90%), Postives = 39/58 (67.24%), Query Frame = 2 Query: 14 TIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDE---RMTDPGF 178 TI+ AY RL +K+HPDVSK +E +FK IA AW V+GDK KRA YDE DP F Sbjct: 20 TIKTAYRRLARKYHPDVSKEPDAEARFKEIAEAWAVLGDKEKRAEYDEMWEHRNDPYF 77
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A2E0YS86_9GAMM (DNA-binding protein n=1 Tax=Halioglobus sp. TaxID=2024834 RepID=A0A2E0YS86_9GAMM) HSP 1 Score: 64.3 bits (155), Expect = 1.260e-8 Identity = 27/52 (51.92%), Postives = 40/52 (76.92%), Query Frame = 2 Query: 2 ANHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDE 157 A+ I++AY RL +K+HPD++ G ++EE FK +A AWEV+GD ++RA YDE Sbjct: 16 ADKADIKKAYRRLARKYHPDLNPGEEAEENFKEVAEAWEVLGDDTRRAEYDE 67
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A4R3ZEG0_9ENTR (Curved DNA-binding protein n=296 Tax=Enterobacteriaceae TaxID=543 RepID=A0A4R3ZEG0_9ENTR) HSP 1 Score: 63.5 bits (153), Expect = 2.280e-8 Identity = 33/69 (47.83%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 14 TIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDE---RMTDPGFRHRAEYRRRQQ 211 TI+ AY RL +K+HPDVSK A +E QFK +A AWEV+ D+ +RA YD+ DP F + + R +Q Sbjct: 20 TIKTAYRRLARKYHPDVSKEADAEAQFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPQFGRQQQSRSHEQ 88
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A7X9HYQ3_9BACT (Chaperone protein DnaJ n=2 Tax=Candidatus Microgenomates bacterium TaxID=2093373 RepID=A0A7X9HYQ3_9BACT) HSP 1 Score: 63.5 bits (153), Expect = 2.850e-8 Identity = 29/52 (55.77%), Postives = 41/52 (78.85%), Query Frame = 2 Query: 2 ANHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDE 157 A+ I++AY +LVKK+HPDV+K A SEE+FK + A+EV+ D+SKRA YD+ Sbjct: 16 ASGADIKKAYRKLVKKYHPDVNKEADSEEKFKEVQEAYEVLSDESKRAAYDQ 67
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: UPI00137ABFB0 (molecular chaperone DnaJ n=1 Tax=Alkalibacterium sp. MB6 TaxID=2081965 RepID=UPI00137ABFB0) HSP 1 Score: 62.4 bits (150), Expect = 7.490e-8 Identity = 31/62 (50.00%), Postives = 42/62 (67.74%), Query Frame = 2 Query: 2 ANHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDE---RMTDPGF 178 AN I++AY +L KK+HPD++K A S+E+FK I A+EV+ D KRA YD+ TDP F Sbjct: 17 ANKDEIKKAYRKLSKKYHPDINKEAGSDEKFKKITEAYEVLSDDQKRAAYDQYGHASTDPNF 78
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Match: A0A2V6VTD0_9BACT (Chaperone protein DnaJ n=3 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6VTD0_9BACT) HSP 1 Score: 62.0 bits (149), Expect = 9.000e-8 Identity = 39/88 (44.32%), Postives = 46/88 (52.27%), Query Frame = 2 Query: 2 ANHGTIREAYLRLVKKHHPDVSKGAQSEEQFKAIASAWEVMGDKSKRALYDERMTD-----------PGFRHRAEYRRRQQRGAPAGG 232 A+ TI+ AY RL +KHHPDV+KG S E+FK I A+EV+ D KR YD D PG R EYR G P GG Sbjct: 16 ADDKTIKSAYRRLARKHHPDVAKGKDSTERFKEINEAYEVLSDPEKRQRYDSLGPDWQRYAQAPPGAPGGGFRVEYR-----GEPGGG 98 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1327.2540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1327.2540.1 >prot_L-elsbetiae_contig1327.2540.1 ID=prot_L-elsbetiae_contig1327.2540.1|Name=mRNA_L-elsbetiae_contig1327.2540.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=144bp MGDKSKRALYDERMTDPGFRHRAEYRRRQQRGAPAGGQQSGGRRSYAPPRback to top mRNA from alignment at L-elsbetiae_contig1327:9081..12824+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1327.2540.1 ID=mRNA_L-elsbetiae_contig1327.2540.1|Name=mRNA_L-elsbetiae_contig1327.2540.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3744bp|location=Sequence derived from alignment at L-elsbetiae_contig1327:9081..12824+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1327:9081..12824+ >mRNA_L-elsbetiae_contig1327.2540.1 ID=mRNA_L-elsbetiae_contig1327.2540.1|Name=mRNA_L-elsbetiae_contig1327.2540.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=864bp|location=Sequence derived from alignment at L-elsbetiae_contig1327:9081..12824+ (Laminarionema elsbetiae ELsaHSoW15)back to top |