mRNA_L-elsbetiae_contig13265.2536.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13265.2536.1
Unique NamemRNA_L-elsbetiae_contig13265.2536.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: D7FNH1_ECTSI (U3 small nucleolar RNA-associated protein 11 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNH1_ECTSI)

HSP 1 Score: 366 bits (939), Expect = 9.390e-127
Identity = 189/202 (93.56%), Postives = 197/202 (97.52%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606
            MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAE+LPHDVVQ+LKTQDLGYVSTHRSADERKAA+LRESLHML+AGPRNKHTIFFDSEKEAK+FD AKHFDTVPELA RAFNRPRK TLE AQV GATNRR+LK+VLKKRDASYSEL+QRLER
Sbjct:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAETLPHDVVQLLKTQDLGYVSTHRSADERKAAKLRESLHMLEAGPRNKHTIFFDSEKEAKEFDVAKHFDTVPELADRAFNRPRKDTLEKAQVTGATNRRQLKKVLKKRDASYSELMQRLER 202          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A836CK24_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK24_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.910e-79
Identity = 124/202 (61.39%), Postives = 157/202 (77.72%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606
            MSSLRNAVKR  HKERAQPASR K GLLEKH DYVLRAR+Y  KRDR+ AL+LKA+++NPDEFYF MH+ KT+ GVH ++G+ SL H+   MLKTQD+ Y+   R+ D +KA RL+  LHMLDA P+N HT+F  ++++ + FDAA++FDT PELAGR FNRPR  TLE+ QV GA +R +LK+ LK+RDA+Y E+  R ER
Sbjct:    1 MSSLRNAVKRKTHKERAQPASRSKFGLLEKHSDYVLRARDYNAKRDRLNALRLKASLRNPDEFYFGMHKAKTKEGVHQVEGSSSLDHETAHMLKTQDMAYIHMKRAVDIKKAERLKAGLHMLDAPPQNTHTVFVKNKRQRRAFDAAEYFDTAPELAGRTFNRPRMATLESKQVLGAESRADLKKALKQRDAAYQEVEAREER 202          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A8K1CCZ2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCZ2_PYTOL)

HSP 1 Score: 213 bits (543), Expect = 1.480e-66
Identity = 112/200 (56.00%), Postives = 145/200 (72.50%), Query Frame = 1
Query:    7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDG--AESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRL 600
            SLRN VKR EHKER Q   R+KLGLLEKHKDYVLRAR+Y KK+DR++ +KLKAA +NPDEFYF M+  +TE GVHV +   +E L  + +++LKTQDL Y+   R+ D RKA +L + LH +DA   NKHT+F DS ++   FD A HFDT PELA RAFNR RK+TL+T  +   T++++L+ + K+RDA Y EL  RL
Sbjct:    2 SLRNVVKRREHKERGQLQERKKLGLLEKHKDYVLRARDYNKKQDRLRTMKLKAAFRNPDEFYFKMNTTRTEDGVHVSENNHSEKLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLTQGLHFIDAPKNNKHTVFVDSSEDLNTFDVATHFDTAPELADRAFNRLRKETLKTTTIQATTDKKQLRALTKERDAVYRELNDRL 201          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A5D6XJY8_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJY8_9STRA)

HSP 1 Score: 207 bits (526), Expect = 5.920e-64
Identity = 110/204 (53.92%), Postives = 141/204 (69.12%), Query Frame = 1
Query:    7 SLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDG----AESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606
            SLRN VKR EHKER QP  R+KLGLLEKHKDYV RAR+Y  K+DR++ ++LKAA +NPDEFYF M+  +TEGGVHV D      ++L  D +++LKTQD+ Y+   R+ D RKA +L   LH +DA   NKH +F DSE +  KFD A HFDT PELA RAFNR R   L+T  +   ++ +E+K+  ++RD  Y EL  RLER
Sbjct:    2 SLRNVVKRREHKERGQPQERKKLGLLEKHKDYVKRARDYNSKQDRLRTMQLKAAFRNPDEFYFRMNATRTEGGVHVSDNNRLDGKALTADALKVLKTQDVAYLHLKRAVDMRKAEKLNAGLHFIDAPTANKHVVFVDSEAQLAKFDVAAHFDTAPELADRAFNRVRMDALKTLALPAVSSAKEIKKRNRERDGVYRELSDRLER 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: K3WAT9_GLOUD (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAT9_GLOUD)

HSP 1 Score: 205 bits (522), Expect = 2.390e-63
Identity = 114/205 (55.61%), Postives = 146/205 (71.22%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDA-GPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRLER 606
            MSSLRN VKR EHKER Q   R+KLGLLEKHKDYV RAR+Y KK+D ++AL +KAA +NPDEFYF M+  +TE GVHV   +  + L  + +++LKTQDL Y+   R+ D RKA +L E LH +DA G  NKH +F DS+ E + FD AKHFDTVPE+A RAFNR RK TL+T  +    +++ LK++  +RDA Y EL  RL+R
Sbjct:    1 MSSLRNVVKRREHKERGQLRERKKLGLLEKHKDYVKRARDYNKKQDHLKALAVKAAFRNPDEFYFRMNSTRTEDGVHVSTHNHHKQLSAEALKVLKTQDLAYLHMKRAVDLRKAEKLNEGLHFIDAAGKDNKHVVFVDSKDEVESFDVAKHFDTVPEIADRAFNRLRKDTLKTVSLPAVQDKKTLKKLGIERDAVYRELNDRLQR 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A7S2W8G3_9STRA (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W8G3_9STRA)

HSP 1 Score: 201 bits (511), Expect = 1.410e-61
Identity = 107/213 (50.23%), Postives = 151/213 (70.89%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL---DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLE--------TAQVAGATNRRELKRVLKKRDASYSELVQRLER 606
            M+SLRNA+ R  H+ER+Q ASR  LGLLEK KDYV RAR++ +K  +++ L+ KA  +NPDEFYF M  +KT+ GVHV    DGA+ L HD + ++K+QDLGY+S  ++ D+RK+ RL+  LHML   P N+HT+F D  K+ + FDAA+HFDT+PELAGRAFNRPR+K  E        +  V  +T+ ++ K+++K +D +Y +L +RLER
Sbjct:    1 MASLRNALPRRTHRERSQVASRAHLGLLEKKKDYVERARDFQRKTGKIKNLRKKARERNPDEFYFGMVNQKTKDGVHVAERNDGADKLSHDDILLMKSQDLGYLSMKKAVDDRKSERLQSGLHMLLDKPLNQHTVFLDKSKDVETFDAAEHFDTMPELAGRAFNRPRRKAFEADKEGSIASTPVMTSTSSKQYKKIMKSKDKAYEDLAERLER 213          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A7S1GYF8_HEMAN (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1GYF8_HEMAN)

HSP 1 Score: 198 bits (504), Expect = 1.660e-60
Identity = 114/209 (54.55%), Postives = 143/209 (68.42%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDA----GPRNKHTIFFDS--EKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETA-QVAGATNRRELKRVLKKRDASYSELVQRLER 606
            MSS+RNAVKR  HKERAQPASR++ GLLEKHKDYVLRAR++  K+ R+QAL+ KAA +NPDEFYF M    T+GGVH   G ESL  +   +LK+QDL Y+   +  DERK  RL  SLH + A    G  N+HT+FFDS  E E + FDA+KHFDT P L  RA NRPR + LE   + A   N++  K++ K R+  Y+EL+QR ER
Sbjct:    5 MSSIRNAVKRKTHKERAQPASRKRFGLLEKHKDYVLRARDHNLKKKRLQALQEKAAFRNPDEFYFKMQNMGTKGGVHTNVGGESLDMETALLLKSQDLNYIEMKKRVDERKIERLEASLHAIGAAEAGGRMNQHTLFFDSDDEDEMESFDASKHFDTHPSLVERAVNRPRMEQLEAEDEFAVRPNKKVRKKMEKLREGQYAELLQRKER 213          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: D0NVW8_PHYIT (U3 small nucleolar RNA-associated protein 11 n=14 Tax=Phytophthora TaxID=4783 RepID=D0NVW8_PHYIT)

HSP 1 Score: 197 bits (500), Expect = 5.080e-60
Identity = 111/205 (54.15%), Postives = 140/205 (68.29%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 606
            MSSLRN VKR EHKER Q   RRKLGLLEKHKDYV RAR+Y  K+ R++ L+LKAA++NPDEFY  M   KTEGGVHV   +  +S+  + ++ LKTQDL Y+   R+ D RKA RL   LH +DA   N HT+F D E++   FD A+HFDT PEL  RAFNR RK+ LETA++   A N ++  ++  ++DA Y EL  RL R
Sbjct:    1 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRARDYNSKQKRLKTLQLKAALRNPDEFYHRMRGTKTEGGVHVSTHNHIKSVETEALRTLKTQDLAYLHMKRAVDLRKAERLNRGLHFVDAPKNNNHTVFVDDEEQVDSFDVAEHFDTAPELVDRAFNRIRKRDLETAELPDLAANPKQKYKMQVEKDAMYRELRDRLAR 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A0P1B0R4_PLAHL (U3 small nucleolar RNA-associated protein 11 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0R4_PLAHL)

HSP 1 Score: 195 bits (495), Expect = 2.900e-59
Identity = 109/205 (53.17%), Postives = 143/205 (69.76%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 606
            MSSLRN VKR EHKER Q   RRKLGLLEKHKDYV RA++Y  K+ R++ L+LKAA++NPDEFY  MH  KTEGGVH+   +  +SL  + ++ LKTQDL Y+   R+ D RKA RL   LH +DA   NKHT+F D +++ + FD A++FDTVPELA RAFNR R++ LE  ++   A + ++  ++  +RDA Y EL  RL R
Sbjct:    1 MSSLRNVVKRREHKERGQLRDRRKLGLLEKHKDYVKRAQDYNSKQKRLKMLQLKAALRNPDEFYHRMHNNKTEGGVHISTHNHLKSLSTEALRTLKTQDLAYLHLKRAVDLRKAERLNRGLHFVDAPKDNKHTVFVDDKEQVENFDVAQYFDTVPELADRAFNRIRRRDLEMVELPDMAASPKQKYKMQVERDALYRELRDRLTR 205          
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Match: A0A3R7K0P1_9STRA (U3 small nucleolar RNA-associated protein 11 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K0P1_9STRA)

HSP 1 Score: 194 bits (492), Expect = 1.540e-58
Identity = 108/205 (52.68%), Postives = 141/205 (68.78%), Query Frame = 1
Query:    1 MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQALKLKAAMKNPDEFYFAMHRKKTEGGVHVL--DGAESLPHDVVQMLKTQDLGYVSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFDTVPELAGRAFNRPRKKTLETAQVAG-ATNRRELKRVLKKRDASYSELVQRLER 606
            MSSLRN VKR EHKER Q   RRKLGLLEKHKDYV RA++Y +K+  ++ L+LKA+M+NPDEFY+ M   KTEGGVH+   + A+ L  + ++ LKTQDL Y+   R+ D RKA +L   LH +D    NKHT+F D + +  KFD A+HFDT PELA RAFNR RK  LET ++   A + ++  ++  ++DA Y EL  RLER
Sbjct:   22 MSSLRNVVKRREHKERGQLRERRKLGLLEKHKDYVKRAKDYNQKQKHLRNLQLKASMRNPDEFYYKMIHGKTEGGVHISTHNHAKQLNAEALRTLKTQDLAYLHMKRAVDLRKAEKLNRGLHFIDTPKNNKHTVFVDEDDDVNKFDVAEHFDTAPELADRAFNRLRKADLETMELPDLAADPKQKYKMQVEKDAMYRELRDRLER 226          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13265.2536.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNH1_ECTSI9.390e-12793.56U3 small nucleolar RNA-associated protein 11 n=2 T... [more]
A0A836CK24_9STRA1.910e-7961.39U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A8K1CCZ2_PYTOL1.480e-6656.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XJY8_9STRA5.920e-6453.92U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
K3WAT9_GLOUD2.390e-6355.61U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A7S2W8G3_9STRA1.410e-6150.23U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A7S1GYF8_HEMAN1.660e-6054.55U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
D0NVW8_PHYIT5.080e-6054.15U3 small nucleolar RNA-associated protein 11 n=14 ... [more]
A0A0P1B0R4_PLAHL2.900e-5953.17U3 small nucleolar RNA-associated protein 11 n=1 T... [more]
A0A3R7K0P1_9STRA1.540e-5852.68U3 small nucleolar RNA-associated protein 11 n=4 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13265contigL-elsbetiae_contig13265:372..3935 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score367.1
Seed ortholog evalue5.3e-99
Seed eggNOG ortholog2880.D7FNH1
Preferred nameUTP11L
KEGG koko:K14685,ko:K14769
KEGG TC2.A.100.1
KEGG Pathwayko04216,ko04978,map04216,map04978
Hectar predicted targeting categoryother localisation
GOsGO:0000447,GO:0000460,GO:0000462,GO:0000466,GO:0000469,GO:0000472,GO:0000478,GO:0000479,GO:0000480,GO:0000966,GO:0000967,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010941,GO:0010942,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0030490,GO:0030515,GO:0030684,GO:0031974,GO:0031981,GO:0032040,GO:0032501,GO:0032502,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0042981,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044421,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0048518,GO:0048522,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0065007,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
EggNOG free text desc.rRNA processing
EggNOG OGsCOG5223@1,KOG3237@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko03009
Ec32 ortholog descriptionSmall-subunit processome, Utp11
Ec32 orthologEc-01_005480.1
Exons5
Model size606
Cds size606
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13265.2536.1prot_L-elsbetiae_contig13265.2536.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13265 372..3935 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815503.4270148-CDS-L-elsbetiae_contig13265:371..4611622815503.4270148-CDS-L-elsbetiae_contig13265:371..461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 372..461 -
1691682930.1172314-CDS-L-elsbetiae_contig13265:371..4611691682930.1172314-CDS-L-elsbetiae_contig13265:371..461Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 372..461 -
1622815503.4375713-CDS-L-elsbetiae_contig13265:1386..14771622815503.4375713-CDS-L-elsbetiae_contig13265:1386..1477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 1387..1477 -
1691682930.1297903-CDS-L-elsbetiae_contig13265:1386..14771691682930.1297903-CDS-L-elsbetiae_contig13265:1386..1477Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 1387..1477 -
1622815503.4474208-CDS-L-elsbetiae_contig13265:2348..25001622815503.4474208-CDS-L-elsbetiae_contig13265:2348..2500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 2349..2500 -
1691682930.1378043-CDS-L-elsbetiae_contig13265:2348..25001691682930.1378043-CDS-L-elsbetiae_contig13265:2348..2500Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 2349..2500 -
1622815503.458674-CDS-L-elsbetiae_contig13265:2934..31041622815503.458674-CDS-L-elsbetiae_contig13265:2934..3104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 2935..3104 -
1691682930.1461089-CDS-L-elsbetiae_contig13265:2934..31041691682930.1461089-CDS-L-elsbetiae_contig13265:2934..3104Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 2935..3104 -
1622815503.4711802-CDS-L-elsbetiae_contig13265:3832..39351622815503.4711802-CDS-L-elsbetiae_contig13265:3832..3935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 3833..3935 -
1691682930.1547186-CDS-L-elsbetiae_contig13265:3832..39351691682930.1547186-CDS-L-elsbetiae_contig13265:3832..3935Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13265 3833..3935 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13265.2536.1

>prot_L-elsbetiae_contig13265.2536.1 ID=prot_L-elsbetiae_contig13265.2536.1|Name=mRNA_L-elsbetiae_contig13265.2536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=202bp
MSSLRNAVKRVEHKERAQPASRRKLGLLEKHKDYVLRARNYGKKRDRMQA
LKLKAAMKNPDEFYFAMHRKKTEGGVHVLDGAESLPHDVVQMLKTQDLGY
VSTHRSADERKAARLRESLHMLDAGPRNKHTIFFDSEKEAKKFDAAKHFD
TVPELAGRAFNRPRKKTLETAQVAGATNRRELKRVLKKRDASYSELVQRL
ER
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mRNA from alignment at L-elsbetiae_contig13265:372..3935-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13265.2536.1 ID=mRNA_L-elsbetiae_contig13265.2536.1|Name=mRNA_L-elsbetiae_contig13265.2536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3564bp|location=Sequence derived from alignment at L-elsbetiae_contig13265:372..3935- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTCTCTTCGCAATGCGGTTAAGCGGGTGGAGCACAAGGAGAGGGC TCAGCCGGCGTCGCGAAGAAAACTCGGTCTGCTGGAGAAGCACAAAGACT ATGGTGAGAGGAGAGAGCAGTACATAACGAGCCTTCTCAACGGGGTCCAC GCGGCCACAACCCGTCACCCAAAGAGCCAGCCAACCAGTAGAGTGGGGAT AAGACGCTCCTTTTCTTGCGGTTGTGTATCCCGAGCACTGCTGTTGTCCG ATATCGTTGATCGTCAGCACTACTACTGCTGCTGCTGTCCAACATTTAGC ACTACACACCTGCTAGTGGTTGTACCGCACATCTGCAAGGGATCTCCGCA TCAGGCGTCATGAGCCCCGCTTGCGGCGTCTGTCCCTACACAATCACATA TCCTCGGTGATGAAACTAGTGATGATGCTGCTGTTGATCGACCTACAGCT ACTCCCCGAGCTACCTTTGACCACACCCACCTCCAAACGGAACTCCGTTT GCGCTGTTGTATGTTGTATTGATGCAAAAGGGCGAGATGCCCCGCACGCG CCCTCTCCGACTCTGATGCACACACACACACACATGTACTCTGTGTACAT AAGTATGTGCGGAATAAGACGCAGTGCTTGGTATCCCGATAATGACGTGT AGCTGGCCACTGTCCAAGTGTGATGCTGTCGTTATTGGCGTTGGTGGCCA GACAGCCTTGTGTACTTTCCTGTTTTGGACGAAACTCATGACTTCGTGGA TGCCGGAGCTGCCGCCGTGAGAGCTTCCTTCCGAACACATTTTCCTCTTT TTTGTTTGCCCACCAACCCGAAATAAACAAGTCCTCCGGGCCCGCAACTA CGGTAAGAAGCGGGACCGTATGCAGGCCCTCAAGCTCAAGGCGGCCATGA AAAACCCCGACGAGTTCTACTTCGCCATGCACCGAAAAAAAACGGAGGGA GGCGTGCACGTGCTCGACGGCGCCGAGTCACTGCCGCACGACGTCGTACA GGTAAAACAAATATGTAGGACTAAATCTACGTAGAACGAAACGGACGACA TTGGCCATCACCACCGACACGAACCGATGATAACCCCTCGCGGAGTGCCT CCGCGTGATCGAGGAAGAAAAGAGGAGGCGGGTGGGGAGGGGGGGGGGGT TCTGTAGCACCGGGCAAACCTGGGTAACTGCGGCACATACATGAGACACC TCGCTCTGCTACTGACTGATACTGCCAAGCGTCTCGACTCCGCTGTTCGC TGAATCTTGAATCCTGCTTCTTGGCCCCTTTTCCTCCGCCCCTGGTGTGT TGTGTGTTTTATACCCCGGCTCTTTTTTTCATGGTGGTGCTCCGCGGCGG GGGCGGTCGCCTTTCAAAACAAAAACCGCGCCATCTACATACATACATAC AAACACACACACACAACACACACAAAAAAAAACAGATGCTGAAGACGCAG GATCTCGGGTACGTGTCGACGCACAGATCCGCAGACGAGAGAAAGGCGGC CAGGCTCCGGGAGTCCCTGCACATGCTGGACGCGGGGCCCCGCAACAAGC ACACCATCTTCTTCGACTCGGAGAAGGAGGCGAAAAAGTGAGAGCGACGA CGAGCAAAGGAAACAAAGAAGAAATACTCCGGTGTTTTTCGTGTGTGTGT GTATGTAAATACATATGTATGTGGAAGTCACCCTTATAACGGATTAAACC TCCTACAGTCTGTCGAAGAGGTTTGACCCTTTTCACACGCACGCATAAAA TATGTAGATCCATAACCGGCAACGATACGTACGTACTTGTTTCTCCCTCA AGATAAAGCAAGCTCTCTTTTAACGCCCCGCTCACTATGTTCTAAAAAAA ACGAACCTGCTCTCTCCCAGGGCACGAAAGATTAAGATTCCACGCCAAGA CATTTTTGTTTCGCTCTGTCCATACGAAGTAATAACACAGCAGTACGATG GGCGTGCATGTTTCTTTGTGCGACTGCTTTTCCTATGTATAGAAGTACGT ACATACTCTGCAGACAGACAGATATGAACGTGGTCGCGCGGGAGGGGAGG GGGGGGGGGGAGGGGGGATGCAGTTCTCCTGTATCTCGGAGAAGGACGCA CGCGGTTATTCTCGAAGTCGCGACGGAGGGCAGGTGTATGTACCCGTGTG CAGTGTGCGCGGGGATTCCAACCCTTGTTGGAGCGAATACTTGGGCGTGC TGTTTCGACGAGCGGCGTAATTTAGCTTGCCTTCTTCGGCCATCGTGATG TGCGAGATGCACCTCCGCGGAGCGTGTGGTGGTGTTTTTCTTTTGCTGGG TTTATTCCTGCATATTTACACGAAATTAAATTTCGTGAGTTTTTGTTCAA TATTTAAAAAAGAAAATATGCTTCTCAGTGCGAGCAACCATATACCGTCC GTGTTTTTGTCCGTATTTCTGTATGTTGTTGCTGTCCCTGCCGCGGCCAA TCGGAAAGGTTTGACGCGGCGAAGCACTTCGACACAGTGCCGGAGCTCGC AGGCAGGGCATTCAACCGGCCCCGAAAGAAAACGCTAGAGACGGCGCAGG TGCGTGAAGATCGCTCTTGTCTTGTGTCTGTTTATAGAGAAGGGAGGGGG GAGGGGGGGGGGGGGGCGGGCGGTAAGGAAAGGGGGGGGGCGGTTGCTGC TGCGGGCGAAAGCGCAAGGGGGGAAGGGTTGGCTCGAGGCGCTCACGTGG GCCCCTTGAACTTTTNNNNNNNNNNGAGAGGGGGGGGGGGGAGGGGGGGG GGGGGGGTGGGGTGTGTGAGTGGGGTGGAGTAGAGGAAGGGGGGGGGGGG GGGGGGGGGGGGGGGGGCGAGCGATAAGGAAAGGGTGTGGACGGTTGCTG CTGCGGTCGAAAGCGCAATGGGCGAAGGGTTGGCTCGAGACGTTCATGTT GGCCCTTGATACTTTATTCGGCGTAAGCTCGAACCCATGCATGCAGACTC TTCAGGAATGGAGGGGACTTTGGGAGACGGACGCCCAGGTAGCTCTGTCG GTCTGTCTGCCTGTCTCTTTTCTCTTGGTCGGTTGCTTGCGTTTGTTCTT CCCGCATGGCATGCTGTCATTTGTTTGCTCTTCTCTGCTGTGAGGAAACG AGGGGCGAAGTGTCCAACAACCCCGCACACCGCCTTCTTTTTGTTTTCGA AGGGAGGCGTGCGTGCCGTCCGCAGACCAGATTTCATTTTTGAGGGTTGT TTTGGCAAGCGCACGCACATGTGTAGAAGTTTAGGTATCCAGCATCTTCT CCTTGTTTGAGTGCACACGTGTGTGTGCCTCTTCGTCTGTTGTCGGTGTG TGTCTCCGCTTCCCCTGCCCTTCGAGGTATTGCTTCTCCTGCCCTGCCTG GTATTCCGTGGCACCGTGTTTCTCTTGCACACGTACATACATATGTGTAT ACTTCGAAGTACATAAATACCCCCTAACGTACACATCGTTTTTTTATCTC GCGGCTGGCTGGCTGCGTCGGCAGGTTGCCGGGGCGACCAACAGGAGAGA GCTCAAAAGAGTGCTCAAGAAACGTGACGCTTCGTACAGCGAGCTCGTCC AGCGGCTGGAAAGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13265:372..3935-

>mRNA_L-elsbetiae_contig13265.2536.1 ID=mRNA_L-elsbetiae_contig13265.2536.1|Name=mRNA_L-elsbetiae_contig13265.2536.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1212bp|location=Sequence derived from alignment at L-elsbetiae_contig13265:372..3935- (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTCTCTTCGCAATGCGGTTAAGCGGGTGGAGCACAAGGAGAGGGC
TCAGCCGGCGTCGCGAAGAAAACTCGGTCTGCTGGAGAAGCACAAAGACT
ATGATGTCGTCTCTTCGCAATGCGGTTAAGCGGGTGGAGCACAAGGAGAG
GGCTCAGCCGGCGTCGCGAAGAAAACTCGGTCTGCTGGAGAAGCACAAAG
ACTATGTCCTCCGGGCCCGCAACTACGGTAAGAAGCGGGACCGTATGCAG
GCCCTCAAGCTCAAGGCGGCCATGAAAAACCCCGACGAGTTCTACTTCGC
CATGCACCGAAAAAAAACGGAGGGAGGCGTGCACGTGCTCGACGGCGCCG
AGTCACTGCCGCACGACGTCGTACAGTCCTCCGGGCCCGCAACTACGGTA
AGAAGCGGGACCGTATGCAGGCCCTCAAGCTCAAGGCGGCCATGAAAAAC
CCCGACGAGTTCTACTTCGCCATGCACCGAAAAAAAACGGAGGGAGGCGT
GCACGTGCTCGACGGCGCCGAGTCACTGCCGCACGACGTCGTACAGATGC
TGAAGACGCAGGATCTCGGGTACGTGTCGACGCACAGATCCGCAGACGAG
AGAAAGGCGGCCAGGCTCCGGGAGTCCCTGCACATGCTGGACGCGGGGCC
CCGCAACAAGCACACCATCTTCTTCGACTCGGAGAAGGAGGCGAAAAAAT
GCTGAAGACGCAGGATCTCGGGTACGTGTCGACGCACAGATCCGCAGACG
AGAGAAAGGCGGCCAGGCTCCGGGAGTCCCTGCACATGCTGGACGCGGGG
CCCCGCAACAAGCACACCATCTTCTTCGACTCGGAGAAGGAGGCGAAAAA
GTTTGACGCGGCGAAGCACTTCGACACAGTGCCGGAGCTCGCAGGCAGGG
CATTCAACCGGCCCCGAAAGAAAACGCTAGAGACGGCGCAGGTTTGACGC
GGCGAAGCACTTCGACACAGTGCCGGAGCTCGCAGGCAGGGCATTCAACC
GGCCCCGAAAGAAAACGCTAGAGACGGCGCAGGTTGCCGGGGCGACCAAC
AGGAGAGAGCTCAAAAGAGTGCTCAAGAAACGTGACGCTTCGTACAGCGA
GCTCGTCCAGCGGCTGGAAAGGGTTGCCGGGGCGACCAACAGGAGAGAGC
TCAAAAGAGTGCTCAAGAAACGTGACGCTTCGTACAGCGAGCTCGTCCAG
CGGCTGGAAAGG
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