mRNA_L-elsbetiae_contig13212.2509.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: D7FT36_ECTSI (Aspartyl protease family A01A, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT36_ECTSI) HSP 1 Score: 466 bits (1199), Expect = 1.130e-158 Identity = 248/346 (71.68%), Postives = 275/346 (79.48%), Query Frame = 3 Query: 396 ATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKS---------------PQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEPGQGTWDPYACLRGQNIGGHVRSARSSTTAKRKA 1388 ATGK DGKV+VQ+LL+FIFPKSLQHPLSTGRL+AFA+YGPLDSN+ LRSG+NG+R+VSTWE DTMCLQFERED+LQVYISGG+PLFVL++AQKEEVIAQADSHLKTAKGRGYRRQ+TR EV+ LLS LPR A+GL SFHDAQKLIM YREKQIARFKVIFPE+A G A K+ RA KS G G G + ET + A G LAS + + G S GG A R GG RAKFSA+VAP EMF+KD+G TPAG+A HTSKLLSTRAYKV NIADGNDPGLTQNVKLIR+D E GQGTWDPYACLRG NIGGHVRSARSSTTAKRKA Sbjct: 9 ATGKRDGKVNVQELLEFIFPKSLQHPLSTGRLYAFALYGPLDSNSELRSGYNGQRVVSTWEIDTMCLQFEREDILQVYISGGRPLFVLNDAQKEEVIAQADSHLKTAKGRGYRRQVTRGEVVDLLSTLPRYASGLVSFHDAQKLIMGYREKQIARFKVIFPEIAGGAASKQAGRASKSCAHGNIGGGGKTLDGDVGRGGGGDRSCALAETTVVGR-AQAGKVLASTENMSTGCSGGGGAKRKGG---RAKFSAEVAPAEMFVKDMGHTPAGIANHTSKLLSTRAYKVSNIADGNDPGLTQNVKLIRDDRQPEQGQGTWDPYACLRGYNIGGHVRSARSSTTAKRKA 350
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S3Y154_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y154_HETAK) HSP 1 Score: 244 bits (622), Expect = 5.560e-72 Identity = 151/349 (43.27%), Postives = 197/349 (56.45%), Query Frame = 3 Query: 378 TSDVCPATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVA------------TGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEPGQGT-WDPYACLRGQNIGGHVRSARSSTTAKRK 1385 T+ V K +V ++ L+ F+FP LQHPLSTGRLFAF +YGPLD N+ LRSGH G+ +V +E D MC +FERE +LQVY+ G +LSE++ E VIAQAD K AKG+ Q++R E L +DLPRDA G SFHD Q+ I+ YRE++IA KVIFPE+ Q A++ GE G K + AGR + A + G SRR VAPPEMF K GFT ++ ++LLS A+++ +I GN LTQNV+L+RE EP G WD +CLRG NIGGHV++A+S+TT KRK Sbjct: 28 TASVITRRRKAQVQVSLESLMVFLFPPGLQHPLSTGRLFAFGLYGPLDENSQLRSGHKGQHIVQRFELDAMCQRFEREIILQVYL-GSDSFELLSESEVEAVIAQADRRTKVAKGKAGMPQVSREEAAALFADLPRDADGRLSFHDMQRKIVEYREQKIAELKVIFPELMGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPQQAAVSDAGEP---------GSXXXXFKLMDAGRQAPVSAKKKG-LSRR------VAPPEMFQKGTGFTEMEMSSQVNQLLSKHAFRITDIEHGNASELTQNVQLLRE--IREPDDGRKWDSNSCLRGSNIGGHVKTAKSATTVKRK 357
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S2B712_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B712_9STRA) HSP 1 Score: 240 bits (613), Expect = 1.860e-71 Identity = 145/319 (45.45%), Postives = 187/319 (58.62%), Query Frame = 3 Query: 444 FIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDL-PRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIR---EDSPLEP-GQGTWDPYACLRGQNIGGHVRSARSSTTAKRK 1385 F+FP++LQHP+STGRLFAF YGPLD++A LRSGH G+ +V WE DTMC QFERED+LQ+Y+ GQ L+E Q EE++AQADS LK AKG+ +Q+T EV + SDL P A GL FHD Q+ I+ YR+ I K +FPEV T AK+ +G + E GP A+ GRS+G TRG + A VAP MF++D G VA T+KLL +A+ + NIADGN LT NV+L+R +DS P G+ TWD RGQ +G V++ +SSTT KRK Sbjct: 7 FVFPQNLQHPMSTGRLFAFGFYGPLDADARLRSGHKGQHVVGNWELDTMCRQFEREDILQIYMLPGQTHSNLTEDQAEEILAQADSRLKVAKGKAMMKQVTPEEVDMIFSDLEPDPATGLLQFHDCQQRIIEYRQYCIKLNKEVFPEV-TSKAKR---------------------IGSLKSGPEFTPIGPLGATYNEFGPGRSTG-RRTRG------VRVGASVAPATMFLRDKGLNSMEVASSTNKLLCHKAFSLCNIADGNSSELTANVRLVRSEPKDSAYTPEGRSTWDRNHATRGQLMGAFVKAPKSSTTVKRK 296
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S4A522_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A522_9STRA) HSP 1 Score: 195 bits (495), Expect = 2.910e-53 Identity = 118/304 (38.82%), Postives = 163/304 (53.62%), Query Frame = 3 Query: 420 VDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRR--AKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSP-LEPGQGTWDPYACL 1322 V + L+ F+FP L HPLSTGRL+AF YGPLD LRSG G+ ++ WE D MC QFERED LQVY+S G+ L LSE Q+ E+I+QAD+ +K+ +G+G Q+++ EV + + G FH+ Q+ ++ +RE +I + +V++P VA + F ++ + + L S KR SRR AK S VAPP MF KD G + VA +++L TRAYK+ +I D N P LTQNV LIRED E G+G W +CL Sbjct: 78 VSIDDLISFVFPADLYHPLSTGRLYAFGFYGPLDRQQQLRSGPKGQHVLGRWELDAMCHQFEREDCLQVYVSEGRALCTLSEEQQNELISQADARMKSKRGKGLMPQLSKDEVRDIFEGVETSPDGTMRFHEMQQRVLAFREDRIKKMRVMYPLVARKPLRVGFGGSQTASR-------------------------KSLTSTKR-----------------SRRTTAKVSPAVAPPTMFQKDKGLRNSDVATRINRMLCTRAYKICDIGD-NTPELTQNVALIREDDKDRELGEGPW---SCL 335
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A835ZGK5_9STRA (Putative aspartyl protease family A01A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGK5_9STRA) HSP 1 Score: 182 bits (462), Expect = 3.310e-49 Identity = 115/322 (35.71%), Postives = 160/322 (49.69%), Query Frame = 3 Query: 417 KVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHT--------------------SKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEP-GQGTWDPYAC 1319 +V + LL FIFP LQHPLS+GRL F YGP N L SG G+ +V WE D+MC +RED+LQVY+S +PL L AQ+EE+IAQ+ QITR +VI L +PR SFHD QK+++ YR++++A K+++P +A RA+ + +G + A+ ++ P R + KFS DVAP MF+KD G +A +KLLST+A+K+ +I DGN+P LT NV+LIRED+ +P G WD C Sbjct: 27 RVFLDDLLKFIFPVHLQHPLSSGRLIVFGYYGP-PVNGQLHSGQRGEHVVGDWELDSMCTTIDREDVLQVYVSDDRPLCELLAAQQEEIIAQSTVTFP---------QITREQVIALFEGVPRGTDNAFSFHDVQKVVVAYRDRRVADGKIMYPSLAAHSKSPPRKRAQSTEKGTA------------------------TAAQRQSPISR------------GHKFKFSPDVAPATMFLKDKGLGDMEMATQRPLHSIQTINEVLLLTCMVQINKLLSTKAFKISSIEDGNNPSLTGNVRLIREDTTHQPQGGAQWDETCC 302
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A7S2RFT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RFT5_9STRA) HSP 1 Score: 151 bits (381), Expect = 4.000e-39 Identity = 75/143 (52.45%), Postives = 99/143 (69.23%), Query Frame = 3 Query: 474 LSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAK 902 +STGRL AF +GPLD A LRSG+ G+ +VS WE DTMC QFERED+LQVY+ GQ L+E + E++AQAD+ +K AKG+ +Q+T EV +L +DL RD GL +FHD Q+ IM++RE I KVIFP + G+ K Sbjct: 1 MSTGRLLAFGFHGPLDHAARLRSGYLGQHVVSRWELDTMCRQFEREDILQVYMQKGQSPSALAEEEALELLAQADTRMKVAKGKALMKQVTEEEVRELFADLHRDEDGLLTFHDMQQRIMQFRENAIKSNKVIFPHLTPGVGK 143
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A662XLY3_9STRA (NDK domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLY3_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.670e-37 Identity = 104/310 (33.55%), Postives = 151/310 (48.71%), Query Frame = 3 Query: 369 EGTTSDVCPATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLEPGQG 1298 EG SD P+ K + + QL F+FP +QHP S GRLF FA+YGPLD+++ LRSG G+ +V+ E T+ ERED+L VY + LS+ ++EEV+ Q D LK+ Q T ++ L + LPRD G SFHD Q+++++ R +++ K + RF R + R+ A +S + GGG + AP +F+KDVG T A A ++LLS RA+++ + DGN P LTQNV+L+R D P QG Sbjct: 224 EGRASDGSPSLRKRSAMMALDQLQSFLFPAHVQHPNSAGRLFVFALYGPLDAHSRLRSGEKGQHVVTDGELATLATHMEREDILAVY-----EMCSLSQEEEEEVVRQVDHTLKSFP------QYTPRDIAALFASLPRDPQGALSFHDMQRVVLKERLRRVLCMKQRLHPALAAPIRNRFAR-----------------------------------TLTRMAAAQSG----SEGGGV-------VNGAPASLFLKDVGATSAENATLVTRLLSARAFQICQLQDGNSPELTQNVRLLRADR-ARPSQG 475
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A485KDQ3_9STRA (Aste57867_4356 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDQ3_9STRA) HSP 1 Score: 154 bits (389), Expect = 3.520e-37 Identity = 101/285 (35.44%), Postives = 144/285 (50.53%), Query Frame = 3 Query: 420 VDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIRED 1274 V + L++F+FP ++QHP STGRLF F++YGPLD+ + LRSG G +V+ E +TMCL RED+L VY G LS ++EEV+ QAD H+K + + TR ++ +L +P + GL SFHD QK IM R +++ K ++ T LA PP+ S R SS AK DVAPP +F+KD G + A S+LL+ A+++ ++ GN P LTQNV+L+RED Sbjct: 252 VGLDALMNFLFPPNIQHPNSTGRLFVFSLYGPLDAKSRLRSGEKGLHVVTDSELNTMCLSILREDILSVYGMIG-----LSRDEEEEVLRQADQHMK------HLPRYTRADIEELFRTVPHNKHGLMSFHDMQKRIMEERVRRVLCMK---DKLNTSLA-------------------------------------PPIVSKYRKSLSSSS-------------AKTKYDVAPPSLFVKDAGLNGSENAVLISRLLNCHAFQICHLDQGNSPDLTQNVRLLRED 472
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: V9ENW6_PHYPR (NDK domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=V9ENW6_PHYPR) HSP 1 Score: 150 bits (379), Expect = 7.010e-36 Identity = 107/322 (33.23%), Postives = 151/322 (46.89%), Query Frame = 3 Query: 381 SDVCPATGKLDGKVDVQ---QLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLE-PGQGTWDPYACLRGQN 1334 + V G++ GK V QLL+F+FP+ LQHP S GRLF F +YGPLD + LRSG G +V+ E TM + ERED+L VY + LS+ ++EEV+ Q D LK Q T ++ L + LPRD+ G SFHD Q+ +++ R +++ K + RF+R + RV A +SSG + AP F+KDVG T A S+LLSTRA+++ + DGN P LTQNV+L+R D + + W+P R N Sbjct: 223 ASVMSLNGRIGGKTAVMGLDQLLNFLFPEHLQHPTSAGRLFVFGLYGPLDEYSRLRSGEKGLHIVTDRELTTMSARMEREDILAVY-----GMCSLSQEEEEEVVCQVDHLLKRFP------QYTPRDIETLFAPLPRDSDGNMSFHDMQQAVLKERLRRVVCMKERLHPALAEPVRNRFSR-----------------------------------TLTRVTATKSSG---------------LVNGAPSSFFLKDVGATNVENAALVSRLLSTRAFQICQMEDGNSPALTQNVRLVRFDKAQKFVEREPWNPNCQKRSHN 483
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Match: A0A3R7K4N4_9STRA (NDK domain-containing protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K4N4_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.270e-35 Identity = 103/300 (34.33%), Postives = 143/300 (47.67%), Query Frame = 3 Query: 414 GKVDVQQLLDFIFPKSLQHPLSTGRLFAFAMYGPLDSNANLRSGHNGKRLVSTWETDTMCLQFEREDLLQVYISGGQPLFVLSEAQKEEVIAQADSHLKTAKGRGYRRQITRPEVIQLLSDLPRDAAGLASFHDAQKLIMRYREKQIARFKVIFPEVATGLAKKRFNRAEKSPQGVSGQGRAMALVGETEMAEEGATHGPPLASAKRVPAGRSSGGEATRGGGFSRRAKFSADVAPPEMFMKDVGFTPAGVAKHTSKLLSTRAYKVGNIADGNDPGLTQNVKLIREDSPLE-PGQGTWDP 1310 G +D+ QLL+F+FPK LQHP S GRLF F +YGPLDS++ LRSG G +V+ E TM + ERED+L VY + LS+ ++EEV+ Q D LK Q T ++ L S L RDA G +FHD Q+ +M+ R +++ K L + +F R + AT G L + AP F+KDVG T A S+LLSTRA+++ + DGN P LTQNV+L+R D + + W+P Sbjct: 209 GAMDLDQLLNFLFPKHLQHPNSAGRLFVFGLYGPLDSHSRLRSGERGLHVVTDRELTTMSTRIEREDILAVY-----SMCSLSQEEEEEVVRQVDRLLKCYP------QYTPRDIETLFSPLLRDADGNMNFHDMQRAVMKERLRRVVCMKERLHPALGVLVRNQFART---------------------LTRLTATKGDSLVNG-----------------------------APSSFFLKDVGATDVENAALVSRLLSTRAFQICQMEDGNSPELTQNVRLVRPDKAQQFVNRDPWNP 447 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13212.2509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13212.2509.1 >prot_L-elsbetiae_contig13212.2509.1 ID=prot_L-elsbetiae_contig13212.2509.1|Name=mRNA_L-elsbetiae_contig13212.2509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp MLSVKEGTTSDVCPATGKLDGKVDVQQLLDFIFPKSLQHPLSTGRLFAFAback to top mRNA from alignment at L-elsbetiae_contig13212:1105..4981+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13212.2509.1 ID=mRNA_L-elsbetiae_contig13212.2509.1|Name=mRNA_L-elsbetiae_contig13212.2509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3877bp|location=Sequence derived from alignment at L-elsbetiae_contig13212:1105..4981+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13212:1105..4981+ >mRNA_L-elsbetiae_contig13212.2509.1 ID=mRNA_L-elsbetiae_contig13212.2509.1|Name=mRNA_L-elsbetiae_contig13212.2509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2076bp|location=Sequence derived from alignment at L-elsbetiae_contig13212:1105..4981+ (Laminarionema elsbetiae ELsaHSoW15)back to top |