mRNA_L-elsbetiae_contig13207.2505.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13207.2505.1
Unique NamemRNA_L-elsbetiae_contig13207.2505.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE)

HSP 1 Score: 219 bits (558), Expect = 1.010e-61
Identity = 146/331 (44.11%), Postives = 193/331 (58.31%), Query Frame = 1
Query:   43 GGGMPKELNDFLSWLEGLE---NFGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREK-RVISRSLKVVLVGREGTGKTSLRQSIAAGRAVPT-EGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDASQEGCSEGG-TVCTVED----LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRSSSSGGR-AVEIERDTSLTSCAPPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGRY 1002
            GG MP +L   L  LE  E   +     NPW EPP +++    KG + ++R YF DLF +  R+  R +KVVLVG+EG GKTSLRQS+ A +A PT E   +STV   ++   L G SVR+ DCAGQVAY GLLQ+FLT R+V +LV +A +     G   +  VE+    L+ L +  WL ++S R+PG DVILV  KCDL +G  +   Q   R+E ACR WL S    G  +V +ER  SLTSC P G  ++    + RG       K GW CDW   + G    PSL+ R+V   D G LR  +MVLP+SW +AL+FL  L + GR+
Sbjct:  110 GGPMPSQLCRLLDLLESREAGRHLSLNSNPWAEPPESIV---AKG-LKSVRGYFEDLFADHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMKLEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEGLRVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETGQ---RIEHACRTWLSSWVRNGMDSVRLERHVSLTSCFPIGASEH--GESRRG---NHALKQGWACDWR-DVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSL-EYGRH 426          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: D7FZA1_ECTSI (LRR-GTPase of the ROCO family, incomplete sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA1_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.720e-59
Identity = 148/341 (43.40%), Postives = 195/341 (57.18%), Query Frame = 1
Query:   22 DVHIER-----QGGGMPKELNDFLSWLEGLE--NFGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREKRVISRS-LKVVLVGREGTGKTSLRQSIAAGRAVPT-EGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDASQEGCSEGG-TVCTVED----LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRSSSSGGR-AVEIERDTSLTSCAPPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            DVH +       GG MP +L   L  L+ L   N     NPW EPP +++ +  K    +IR YF DL+ E   I RS +KVVLVG+EG GKTSLRQS+ A +A PT E   +STV   ++   L G SVR+ DCAGQVAY GLLQ+FLT R+V +LV +A + G   G   V  VE+    L+ L +  WL ++S R+PG DVILV  KCDL SG  +   +   R+E ACR+WL +    G   V +E   SLTSC P G  ++  S+     +     K GW CDW   + G    PSL+ R+V   D G LR  +MVLP+SW +AL+ L  L ++GR
Sbjct:   50 DVHHKEGGDIMPGGAMPSQLCRLLVVLDRLSGVNLALLGNPWAEPPESIVAKGPK----SIRGYFEDLYAEPCWIKRSSVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQQLGSDNVDQVEEDCRKLQALRVCDWLRSISRRVPGNDVILVATKCDLVSGNAE---ETGRRLEHACRMWLSTWVRNGMDPVRLEPHVSLTSCFPIGDGEHGESNTGSDAS-----KQGWACDWRH-VEGDKSSPSLLYRLVNKPDEGGLRGVQMVLPRSWDIALTVLEAL-EHGR 376          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: A0A6H5KSZ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSZ8_9PHAE)

HSP 1 Score: 212 bits (539), Expect = 3.230e-58
Identity = 149/344 (43.31%), Postives = 193/344 (56.10%), Query Frame = 1
Query:   16 GSDVHIERQGGG-MPKELNDFLSWLEGLE-----NFGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREKRVISRSL-KVVLVGREGTGKTSLRQSIAAGRAVPT-EGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDASQ-------EGCSEGGTVCTVEDLKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRSSSSGG-RAVEIERDTSLTSCAPPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            G D   +R  GG MP +L   L  L+ ++     +   G NPWVEPP  ++ +  K    A+R YF DL+ E   I RS+ KVVLVG+EG GKTSLRQS+ A  A PT E   +STV   ++   L G SVR+ DCAGQVAY GLLQ+FLT RAV +LV +A +       E   + G  C    L+ L +  WL ++S R+P  DVILV  KCDL  G    A +  +R+E ACR WL S    G + V +E   SLTSC   G  ++  SS   G   + G   GW CDW   M  GN  PSL+ R+V   D   LR  +MVLP+SW +AL+ L  L ++GR
Sbjct:  118 GHDEGTQRMSGGPMPSQLCRLLDVLDDIQQGKFQSLKLGTNPWVEPPEPIVVKGPK----AVRGYFEDLYAEPCRIKRSIVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVEAMELEGSSVRVYDCAGQVAYTGLLQMFLTPRAVCVLVCNAGKFGQQTRSESNDQVGEDC--RKLEELRVCDWLRSISRRVPNNDVILVATKCDLAGGN---AGKIGARMEHACRRWLSSWVRNGLQPVRLEPCVSLTSCFETGVGEHGESST--GSHELKG---GWACDWR-DMADGNPSPSLLHRLVNKPDGRGLRGTQMVLPRSWDIALTVLEAL-EHGR 445          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI)

HSP 1 Score: 210 bits (535), Expect = 2.160e-57
Identity = 136/328 (41.46%), Postives = 183/328 (55.79%), Query Frame = 1
Query:   43 GGGMPKELNDFLSWLEGLENFGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFRE--KRVISRSLKVVLVGREGTGKTSLRQSIAAGRAVPTEGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDASQEGCSEGGTVCT------VEDLKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRS-SSSGGRAVEIERDTSLTSCAPPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            G  +PK+L   L+ L  L  F    NPW EPP AV+++     I A++ YF DLF E    V  + +KVVLVG+EG GKTSLRQS+  GR  PT G  +STV + ++   + GV++R+ DCAGQVAY GLLQ+FL+ RAV LLV D    G  +G  + +      +  L+ L +  WL +LSFR+P  DV++V  KCDL +G       AA R+E A   WL S S +G  AV +E   SLTSC PP         A  G          W CDW  G+   ++P SL+ R++     G +R   +VLP+SW +AL  L D   +GR
Sbjct:  224 GNALPKQLEALLATLSRL-GFLVHENPWQEPPEAVVSKG----ISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSGSEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGM---GTDAAGRIEGAIGEWLESWSGAGMNAVHVEDGVSLTSCFPPT--PNEDGGAALGKRKSPDEDSTWACDWREGVSVESQP-SLLHRVM-YNSKGNVRGASLVLPRSWNIALEVL-DALGSGR 538          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 7.250e-57
Identity = 139/351 (39.60%), Postives = 192/351 (54.70%), Query Frame = 1
Query:   13 HGSDVHIERQ-------GGGMPKELNDFLSWLEGLENFGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFRE--KRVISRSLKVVLVGREGTGKTSLRQSIAAGRAVPTEGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDASQEGCSEGGTVCT------VEDLKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRS-SSSGGRAVEIERDTSLTSCAPPGWWKYFMSS------ALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            H +DV  + +       G  +PK+L   L+ L  L       NPW EPP AV+++     IPA+R YF DLF E    V  + +KV+LVG+EG GKTSLRQS+  GR  PT GP +STV + ++   + GV++R+ DCAGQVAY GLLQ+FL+ RAV LLV D    G  +G    +      +  L+ L +  WL +LSFR+P  DV++V  KCDL +G    AA AA+R+      W+ S S +   AV +E   +LTSC        F S+      A  G       +  W CDWS GM   ++P SL+ R++   + G LR   +VLP+SW + L  L D   +GR
Sbjct:  171 HSTDVSPDEELLQGNLAGSSLPKQLEALLATLSQL-GLHVHTNPWQEPPEAVVSKG----IPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSGPEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLAAGM---AADAAARMAGGAGNWIESWSDAQMTAVRVEDGVNLTSC--------FASTPNEDGGAALGTRESPEEQSTWACDWSDGMCVESQP-SLLHRVM-YNNKGELRGASLVLPRSWNIGLGVL-DALGSGR 502          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: D8LCS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS7_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 4.930e-56
Identity = 144/335 (42.99%), Postives = 185/335 (55.22%), Query Frame = 1
Query:   22 DVHIER----QGGGMPKELNDFLSWLEGLENFGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREK-RVISRSLKVVLVGREGTGKTSLRQSIAAGRAVPT-EGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDAS----QEGCSEGGTVCTVED---LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRS-SSSGGRAVEIERDTSLTSCAPPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDL 984
            DV  ER     GG +P EL   L  L+G +    G NPW EPP +++ +     + +IR YF DL+ E  RV  RS+KVVLVG+EG GKTSLRQS+ A  A PT E   +STV   +Q   L G SVR+ DCAGQV Y GLLQ+FLT R+V +LV +      + G    G V   ED   L+ L +  WL ++S R+P  DVILV  KCDL  G    A     R+  ACR+WL +   +G + V +E    LTSC P    ++  SS     A     K GW CDW    R  +  PSL+ R+V   D G LR  +MVLP+SW +AL+ L  L
Sbjct:  525 DVGQERAKRMSGGTIPSELRRLLETLDGADT-DLGGNPWAEPPESIVTKG----MESIRGYFEDLYAEPCRVQRRSVKVVLVGQEGAGKTSLRQSMKANEATPTGEWKEESTVFADVQPMELEGSSVRVYDCAGQVGYTGLLQMFLTPRSVCVLVCNVEAFEQRLGSEANGQV--QEDCRKLEELRVCHWLRSISRRVPYSDVILVATKCDLACGN---AGDMGKRLAHACRLWLSNWVRNGMQPVRLEHGVCLTSCCPAAVSEHGESSPGNHYA-----KGGWGCDWR-DHRDDSSSPSLLHRLVNKLDGGGLRGAQMVLPRSWDMALTVLEAL 843          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: D8LF46_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF46_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 8.730e-56
Identity = 139/330 (42.12%), Postives = 188/330 (56.97%), Query Frame = 1
Query:   43 GGGMPKELNDFLSWLEGLEN--FGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREK-RVISRSLKVVLVGREGTGKTSLRQSIAAGRAVPT-EGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDASQEGCSEGGTVC---TVED---LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRS-SSSGGRAVEIERDTSLTSCAPPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            GG MP +L   L  L+ + +   G G NPW EPP +V+ +  K    +IR YF DL+ E  R+   S+KVVLVG+EG GKTSLRQS+ A +A PT +   +STV   ++   L G SVR+ DCAGQVAY GLLQ+FLT R+V +LV +A + G   G   C     ED   L+ L +  WL ++S R+P  DVILV  KCDL  G    A +  SR+E++CR WL     +G + V +E    LTSC P    ++   SA   +     +K GW CDW   +      PS + R+V   D   LR  +MVLP+SW +AL+ L  L ++GR
Sbjct:  345 GGTMPSQLCRLLDVLDPVPSRYVGLGGNPWTEPPESVVAKGPK----SIRGYFEDLYAEPCRITRSSVKVVLVGQEGAGKTSLRQSMKANKASPTGKWNEESTVFANVEPMELDGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGQRRGSEDCGEVEQEDCRKLEELRVCDWLRSISRRVPDNDVILVATKCDLVGGN---AGEIGSRMENSCRTWLSGWVRNGMQPVRLEPHVCLTSCFPIRVGEHGERSAGNHV-----WKGGWACDWR-NVEDDQPSPSFLHRLVNKPDGRGLRGAQMVLPRSWDVALAVLEAL-EHGR 660          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: D8LJS7_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS7_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 2.990e-55
Identity = 143/338 (42.31%), Postives = 192/338 (56.80%), Query Frame = 1
Query:   43 GGGMPKELNDFLSWLE-----GLENFGCG------YNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREK-RVISRSLKVVLVGREGTGKTSLRQSIAAGRAVPT-EGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDASQEGCSEGG-TVCTVED----LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRSSSSGGR-AVEIERDTSLTSCAPPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            GG MP +L   L   +     GL + G G       NPW EPP +++ +  K    +IR YF DL+ E  R+  R +KVVLVG+EG GKTSLRQS+ A +A  T E   +STV   ++   L G SVR+ DCAGQVAY GLLQ+FLT R+V +LV +A + G   G   +  VE+    L+ L +  WL ++S R+P  +VILV  KCDL  G    A +   R+E ACR WL S +     +V +E    LTSC P G  ++  SS+   L+     K  W CDW   + GG   PSL+ R+V   D G LR  +MVLP+SW +AL+FL  L ++GR
Sbjct:  273 GGPMPSQLCRLLDIFDSVEAQGLNDTGIGPSLSLSENPWAEPPESIVAKGPK----SIRGYFEDLYAEHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATLTGEWKENSTVLADVESMELEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFGEQLGSDNIDQVEEDCRKLEALRVCNWLRSISRRVPDTEVILVATKCDLAGGN---AWEIGRRMEKACRRWLSSWACRNMLSVRLEPGVCLTSCFPVGAGEHGESSSENFLS-----KSCWACDWR-DVGGGEPSPSLIYRLVNKPDKGGLRGVQMVLPRSWDIALTFLDSL-EHGR 596          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 5.620e-55
Identity = 145/349 (41.55%), Postives = 188/349 (53.87%), Query Frame = 1
Query:   13 HGSDVHIERQ-------GGGMPKELNDFLSWLEGLE-NFGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREKRVISRSL-KVVLVGREGTGKTSLRQSIAAGRAVPTEGPADSTVHMTIQDTTLG-GVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDAS----QEGCSEGGTVCTVE--DLKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRS-SSSGGRAVEIERDTSLTSCAPPGWWKYFMSSALRGLAW---VSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            H SDV  + +       GG +PK+L+  L+    LE N     NPW EPP AV+    K  + A  +YF DLF E   + R++ KVVLVG+EG GKTSLRQSI + +  PT GPA+STV + +++  +  GVS+RI DCAGQVAY GLLQ+FL+ RAV LLV +      + G   GG     +   L+ L +  WL +LSFR+P  DV+ V  KCD  +G    A   A R+E A R WLR  S S   AV +E   SLTSC P             G+A     S     W CDW     G    PSL+ R++     G +R   +VLP+SW +AL  L D   NGR
Sbjct:  306 HSSDVARDEELQQGCSAGGSIPKQLDGLLTLFRKLERNLSLEGNPWKEPPEAVV----KTGMAAASAYFADLFEEGVSVRRNMIKVVLVGQEGAGKTSLRQSIRSRKPTPTSGPAESTVQIDVEEIEMDDGVSLRIYDCAGQVAYTGLLQMFLSPRAVTLLVCNTEAFGERGGYPAGGNPLNEDLYKLQELRVCSWLRSLSFRIPDSDVVAVATKCDRAAGM---AVVMAERMELAIRKWLREWSRSQMTAVRVEDGVSLTSCVPSA------PQERDGIALGKRKSPEDSMWACDWRQDTPG-EPLPSLLHRVI-YNSKGHIRGAALVLPRSWNIALVVL-DALGNGR 638          
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Match: D7FUC3_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC3_ECTSI)

HSP 1 Score: 200 bits (509), Expect = 6.320e-54
Identity = 139/333 (41.74%), Postives = 185/333 (55.56%), Query Frame = 1
Query:   43 GGGMPKELNDFLSWLEGLEN--FGCGYNPWVEPPAAVLNEAGKGNIPAIRSYFVDLFREK-RVISRSLKVVLVGREGTGKTSLRQSIAAGRAVPT-EGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRRAVYLLVWDAS----QEGCSEGGTVCTVED---LKTLGILPWLAALSFRLPGGDVILVGNKCDLRSGAQDAAAQAASRVESACRVWLRS-SSSGGRAVEIERDTSLTSCAPPGWWKYFMSSALRGLA--WVSGYKLGWPCDWSVGMRGGNRPPSLVERIVRVGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGR 999
            GG +P +L   L  L+  E        NPW EPP +++ +  K    +IR YF DL+ E  RV   S+KV+LVG+EG GKTSLRQS+    A PT +   +STV   ++   L G SVR+ DCAGQ AY GLLQ+FLT R+V +LV +A     Q     GG +  +ED   L+ L +  WL +++ R+P  D ILV  KCDL  G    AA+   R+E ACR+WL S   +G + V +E    LTSC P      F     RG A   V G   GW CDW  G  G +  P L+ R+V   D G LR  ++VLP+SW +AL+ L  L ++GR
Sbjct:  203 GGRIPSQLCRLLDVLDRAEGGVLSLEDNPWAEPPESIVAKGPK----SIRGYFEDLYAEPCRVERSSVKVILVGQEGAGKTSLRQSMKTNEATPTGDWKEESTVFADVEPMELEGSSVRVYDCAGQAAYTGLLQMFLTPRSVCVLVCNAEAFGQQRANDTGGQI--MEDCRKLEELRVCEWLRSIARRVPDNDAILVATKCDLVGGN---AAEVGRRMEQACRMWLASWVRNGMQPVRLEHGVGLTSCRPTR----FGEHGERGTANHTVEG---GWVCDWR-GHIGDDSAPGLLHRLVNKPDGGGLRGTQLVLPRSWDIALTVLEAL-ESGR 517          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13207.2505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L650_9PHAE1.010e-6144.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZA1_ECTSI1.720e-5943.40LRR-GTPase of the ROCO family, incomplete sequence... [more]
A0A6H5KSZ8_9PHAE3.230e-5843.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL98_ECTSI2.160e-5741.46LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D7FL89_ECTSI7.250e-5739.60LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LCS7_ECTSI4.930e-5642.99LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LF46_ECTSI8.730e-5642.12LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
D8LJS7_ECTSI2.990e-5542.31LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JME6_9PHAE5.620e-5541.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUC3_ECTSI6.320e-5441.74LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13207contigL-elsbetiae_contig13207:1724..4314 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score211.8
Seed ortholog evalue4.8e-52
Seed eggNOG ortholog2880.D7FL98
KEGG rclassRC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248
KEGG koko:K01188
KEGG ReactionR00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040
KEGG Pathwayko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003002,GO:0003006,GO:0003674,GO:0004857,GO:0007275,GO:0007389,GO:0008150,GO:0009791,GO:0009908,GO:0022414,GO:0030234,GO:0032501,GO:0032502,GO:0043086,GO:0044092,GO:0048367,GO:0048608,GO:0048731,GO:0048832,GO:0048833,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0061458,GO:0065007,GO:0065009,GO:0090567,GO:0098772
EggNOG OGs2CYK8@1,2S4YE@2759
EC3.2.1.21
CAZyGH1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1005
Cds size1002
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13207.2505.1prot_L-elsbetiae_contig13207.2505.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13207 1725..4314 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815500.3915513-CDS-L-elsbetiae_contig13207:1724..23181622815500.3915513-CDS-L-elsbetiae_contig13207:1724..2318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 1725..2318 -
1691682928.2972865-CDS-L-elsbetiae_contig13207:1724..23181691682928.2972865-CDS-L-elsbetiae_contig13207:1724..2318Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 1725..2318 -
1622815500.4081838-CDS-L-elsbetiae_contig13207:3078..32081622815500.4081838-CDS-L-elsbetiae_contig13207:3078..3208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 3079..3208 -
1691682928.3094833-CDS-L-elsbetiae_contig13207:3078..32081691682928.3094833-CDS-L-elsbetiae_contig13207:3078..3208Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 3079..3208 -
1622815500.4240754-CDS-L-elsbetiae_contig13207:3672..39071622815500.4240754-CDS-L-elsbetiae_contig13207:3672..3907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 3673..3907 -
1691682928.320706-CDS-L-elsbetiae_contig13207:3672..39071691682928.320706-CDS-L-elsbetiae_contig13207:3672..3907Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 3673..3907 -
1622815500.4363036-CDS-L-elsbetiae_contig13207:4271..43141622815500.4363036-CDS-L-elsbetiae_contig13207:4271..4314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 4272..4314 -
1691682928.3316267-CDS-L-elsbetiae_contig13207:4271..43141691682928.3316267-CDS-L-elsbetiae_contig13207:4271..4314Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13207 4272..4314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13207.2505.1

>prot_L-elsbetiae_contig13207.2505.1 ID=prot_L-elsbetiae_contig13207.2505.1|Name=mRNA_L-elsbetiae_contig13207.2505.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=334bp
GSCAHGSDVHIERQGGGMPKELNDFLSWLEGLENFGCGYNPWVEPPAAVL
NEAGKGNIPAIRSYFVDLFREKRVISRSLKVVLVGREGTGKTSLRQSIAA
GRAVPTEGPADSTVHMTIQDTTLGGVSVRILDCAGQVAYYGLLQLFLTRR
AVYLLVWDASQEGCSEGGTVCTVEDLKTLGILPWLAALSFRLPGGDVILV
GNKCDLRSGAQDAAAQAASRVESACRVWLRSSSSGGRAVEIERDTSLTSC
APPGWWKYFMSSALRGLAWVSGYKLGWPCDWSVGMRGGNRPPSLVERIVR
VGDNGPLRAEEMVLPQSWGLALSFLRDLSDNGRY
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mRNA from alignment at L-elsbetiae_contig13207:1724..4314-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13207.2505.1 ID=mRNA_L-elsbetiae_contig13207.2505.1|Name=mRNA_L-elsbetiae_contig13207.2505.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2591bp|location=Sequence derived from alignment at L-elsbetiae_contig13207:1724..4314- (Laminarionema elsbetiae ELsaHSoW15)
GGTAGCTGTGCGCACGGCAGCGACGTGCATATCGAGCGTCAAGGTATGAG GGGAAATTGGTGTGCGTCGTCTTCTGCGTGGTTTTCGAGAACAAGTGCAA TGGGTCAGCGTGCTTCTGCAACATGACCAAGCTGATTTGGAAAGGGGAGG GGTTAGGCTCGTTCGCAGTCAGCATTCGTGTTGTTGCACAAGTTGAAAGG CCGCTCTGCGAAATGTGTTCTAAATGCCTAAATATGGGCATTGCGAAATG CATCATGTGCTGGCGCAATTGATGCGATGTCAAGGCCGGCCTTCAAAGTG TATGGAACGTTCCTCGAGTCTTGGGACAGCCAAATCAAAACTCCTCCGGC CAAAATTGAACGCCCTGGTCTCTGCCGGCCCGTTGTTGTGTTTCGGCGTT GTGGTAGGTGGTGGGATGCCGAAGGAACTGAATGATTTCCTCAGTTGGTT GGAAGGGCTCGAAAATTTTGGTTGCGGTTACAATCCGTGGGTGGAGCCCC CTGCTGCCGTGCTCAACGAGGCGGGCAAGGGAAACATCCCCGCAATACGG TCGTACTTCGTTGATCTCTTCCGAGAGAAGCGGGTCATATCGCGGAGTCT CAAGGTGGTACTGGTCGGCCGGGAGGGTACTGGAAAGACAAGGTGCGCAG TCAAGTGTTGCCGATCCTAGTGCCACTCCAGCCTGTGTGATTTGGCGTGG CGGTATGGTACGTACTTCGTCAACAAGTACACGAAAATACAACCGACGCG ACGTTTTTCGTGTCCCGACACATGGCTCACGCGCCCATACAGTCGAGGAA AGGCTGCATCATCTCATCATGCGCAGTTAAATTGCACTGGCATTTGATTC TCACTGCCGGTGAAGGTGCTTGACCCTCCCTACTCGCAGGCGACGGTTGT TCAGTGGCGAAGAATCGATGTCATCGGTCCGCAAGGCTCTATCGCAACTT TCGGTAAATTGAAAACTAGAGCCTCCGTGATGCCATTCAATTTTCCCAAC CGACCGCGCCTGAAGACACCTGTTTGTGTATCTGCGGTACTGAACCCCAA CTTTTGTTGAACTTTTCCGCGGTCTTCCTGCTTGCATGCATCATCTTGTG CGTCAGCCTGCGCCAGAGTATTGCCGCGGGGCGGGCTGTGCCCACAGAAG GGCCGGCAGACAGTACAGTACACATGACCATCCAGGACACGACTTTGGGC GGGGTTTCTGTTCGGATCCTTGACTGTGCCGGGCAGGTAATGGCCACATG CCGTGGGTGGTTGTGTGATCTTTGCGTTGCGGCGTTCCTTAACAAGCACT ACTAACGTGACGCCGTGCTTCGTCTCATGGGTTTTTCTTGAAGCGTAATT TAATTCTCGTTTGTTTCGGCCATACAGCTGTAGCCCAACGTCGCGTTGGT GCTTCCAGCCGTGGTGCTCGATCCTCATACAAAAGGCTTGCTCGTTTGCA ATTCCAAGAGGAGGATATAGCCACCAAGCCTTTCGAGTATAAGACAAGTC GAAAATTAAGCATTGTAGAATGCTCCATGAAGCGGCCATTATTACCCACA AGAATTGAGGACAGAAGGAAGCAAGCACTAAATGCAGCATTTGCCATGCG CCTGAACGTCGTAAAGGGGCACATGAATCACTCCGCTCCTTGATACCGAT GGACTTTTCGAAGCATACTATAATCGAGTCACGCGTTTGTTGTTAAGGGC CCCAACACCAGAATCCTTGGAACTTTGGATAATTCACCTTATTTTGGGAG GCGGTTGAAAGATTGATCGGCGAGGGCAGCGGTTTCATGCGACCTTCGTT TAGTTTTTGGTGGAGGTTCATCGTGTTTCTCGAGAACTTAAGGGAGACAC CGACATTGTAGTTTTGTGTACTGCTGTGGTATCCTGCATCCATCTGCCTT CTGCGACACACCCCGCCGGCCGTCTGCCTTTTCCTATTGTATCAGGCAGG GGATCAATCAATGTGGACGTGTTTACGGTTTGTTCGTTTTTGACAGGTGG CCTACTACGGCCTCCTGCAACTTTTCTTGACGCGCCGGGCGGTTTATCTC CTGGTGTGGGACGCCAGCCAAGAAGGCTGCAGTGAAGGGGGCACCGTCTG TACGGTGGAGGATCTTAAGACGCTAGGCATCCTTCCGTGGCTTGCAGCAC TTTCATTCCGCCTTCCAGGAGGTGACGTCATCCTGGTCGGCAACAAATGT GATCTACGATCCGGTGCACAGGACGCAGCAGCTCAGGCAGCCTCGAGGGT GGAATCAGCCTGCCGCGTCTGGTTGCGGAGTAGTTCGTCAGGCGGCCGCG CTGTCGAGATTGAGCGAGACACAAGCCTGACCAGTTGTGCACCGCCCGGG TGGTGGAAATACTTCATGTCCAGTGCCTTGCGGGGTCTCGCGTGGGTCTC GGGGTACAAGCTGGGCTGGCCTTGTGACTGGAGCGTGGGGATGAGGGGCG GAAATCGCCCGCCAAGCCTTGTCGAACGCATAGTCCGTGTCGGCGACAAC GGTCCTCTGCGGGCGGAGGAAATGGTGCTACCACAGAGTTGGGGGCTCGC TCTGTCGTTCCTCCGTGACCTGAGTGACAACGGAAGGTACG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13207:1724..4314-

>mRNA_L-elsbetiae_contig13207.2505.1 ID=mRNA_L-elsbetiae_contig13207.2505.1|Name=mRNA_L-elsbetiae_contig13207.2505.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2004bp|location=Sequence derived from alignment at L-elsbetiae_contig13207:1724..4314- (Laminarionema elsbetiae ELsaHSoW15)
GGTAGCTGTGCGCACGGCAGCGACGTGCATATCGAGCGTCAAGGGTAGCT
GTGCGCACGGCAGCGACGTGCATATCGAGCGTCAAGGTGGTGGGATGCCG
AAGGAACTGAATGATTTCCTCAGTTGGTTGGAAGGGCTCGAAAATTTTGG
TTGCGGTTACAATCCGTGGGTGGAGCCCCCTGCTGCCGTGCTCAACGAGG
CGGGCAAGGGAAACATCCCCGCAATACGGTCGTACTTCGTTGATCTCTTC
CGAGAGAAGCGGGTCATATCGCGGAGTCTCAAGGTGGTACTGGTCGGCCG
GGAGGGTACTGGAAAGACAAGGTGGTGGGATGCCGAAGGAACTGAATGAT
TTCCTCAGTTGGTTGGAAGGGCTCGAAAATTTTGGTTGCGGTTACAATCC
GTGGGTGGAGCCCCCTGCTGCCGTGCTCAACGAGGCGGGCAAGGGAAACA
TCCCCGCAATACGGTCGTACTTCGTTGATCTCTTCCGAGAGAAGCGGGTC
ATATCGCGGAGTCTCAAGGTGGTACTGGTCGGCCGGGAGGGTACTGGAAA
GACAAGCCTGCGCCAGAGTATTGCCGCGGGGCGGGCTGTGCCCACAGAAG
GGCCGGCAGACAGTACAGTACACATGACCATCCAGGACACGACTTTGGGC
GGGGTTTCTGTTCGGATCCTTGACTGTGCCGGGCAGCCTGCGCCAGAGTA
TTGCCGCGGGGCGGGCTGTGCCCACAGAAGGGCCGGCAGACAGTACAGTA
CACATGACCATCCAGGACACGACTTTGGGCGGGGTTTCTGTTCGGATCCT
TGACTGTGCCGGGCAGGTGGCCTACTACGGCCTCCTGCAACTTTTCTTGA
CGCGCCGGGCGGTTTATCTCCTGGTGTGGGACGCCAGCCAAGAAGGCTGC
AGTGAAGGGGGCACCGTCTGTACGGTGGAGGATCTTAAGACGCTAGGCAT
CCTTCCGTGGCTTGCAGCACTTTCATTCCGCCTTCCAGGAGGTGACGTCA
TCCTGGTCGGCAACAAATGTGATCTACGATCCGGTGCACAGGACGCAGCA
GCTCAGGCAGCCTCGAGGGTGGAATCAGCCTGCCGCGTCTGGTTGCGGAG
TAGTTCGTCAGGCGGCCGCGCTGTCGAGATTGAGCGAGACACAAGCCTGA
CCAGTTGTGCACCGCCCGGGTGGTGGAAATACTTCATGTCCAGTGCCTTG
CGGGGTCTCGCGTGGGTCTCGGGGTACAAGCTGGGCTGGCCTTGTGACTG
GAGCGTGGGGATGAGGGGCGGAAATCGCCCGCCAAGCCTTGTCGAACGCA
TAGTCCGTGTCGGCGACAACGGTCCTCTGCGGGCGGAGGAAATGGTGCTA
CCACAGAGTTGGGGGCTCGCTCTGTCGTTCCTCCGTGACCTGAGTGACAA
CGGAAGGTACGTGGCCTACTACGGCCTCCTGCAACTTTTCTTGACGCGCC
GGGCGGTTTATCTCCTGGTGTGGGACGCCAGCCAAGAAGGCTGCAGTGAA
GGGGGCACCGTCTGTACGGTGGAGGATCTTAAGACGCTAGGCATCCTTCC
GTGGCTTGCAGCACTTTCATTCCGCCTTCCAGGAGGTGACGTCATCCTGG
TCGGCAACAAATGTGATCTACGATCCGGTGCACAGGACGCAGCAGCTCAG
GCAGCCTCGAGGGTGGAATCAGCCTGCCGCGTCTGGTTGCGGAGTAGTTC
GTCAGGCGGCCGCGCTGTCGAGATTGAGCGAGACACAAGCCTGACCAGTT
GTGCACCGCCCGGGTGGTGGAAATACTTCATGTCCAGTGCCTTGCGGGGT
CTCGCGTGGGTCTCGGGGTACAAGCTGGGCTGGCCTTGTGACTGGAGCGT
GGGGATGAGGGGCGGAAATCGCCCGCCAAGCCTTGTCGAACGCATAGTCC
GTGTCGGCGACAACGGTCCTCTGCGGGCGGAGGAAATGGTGCTACCACAG
AGTTGGGGGCTCGCTCTGTCGTTCCTCCGTGACCTGAGTGACAACGGAAG
GTAC
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