mRNA_L-elsbetiae_contig13200.2501.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13200.2501.1
Unique NamemRNA_L-elsbetiae_contig13200.2501.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: D7G011_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G011_ECTSI)

HSP 1 Score: 342 bits (878), Expect = 1.300e-106
Identity = 178/228 (78.07%), Postives = 191/228 (83.77%), Query Frame = 1
Query:    1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVLGVLTTV 684
            RL  LHGDRVVVAGVERVEKIKGVWLK+LAFEDML RYP LVGRVSMHEVGIANPARG+DYRACQESLSELA RMNAKHG GTV+YEERDP +ATLA+RAALM+VSSVFVKTPVHNGLST+PIEFRVVQEH                     +PGVLILSEAVSCSP +RGS  VNPWQV AVADAMA+AV AEA +R A HEED EWCE+NTTA+WAEDVLGVLTTV
Sbjct:  353 RLTGLHGDRVVVAGVERVEKIKGVWLKLLAFEDMLRRYPGLVGRVSMHEVGIANPARGSDYRACQESLSELADRMNAKHGAGTVIYEERDPKDATLARRAALMSVSSVFVKTPVHNGLSTMPIEFRVVQEH--------LRAEARDKQLSGGSPGVLILSEAVSCSPTMRGSLSVNPWQVEAVADAMADAVMAEAGERIALHEEDMEWCETNTTAQWAEDVLGVLTTV 572          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2AZP8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2AZP8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.630e-31
Identity = 72/218 (33.03%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   22 DRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAK---HGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666
            D+ V AG++R+E++KGV LK+LAFE  L + P   G V ++++ +A   RG+DY      +  L  R+N K   +GE  V+++E +  +  L  R AL++V+ V + T V +GL+  P EF + Q                        PGV++LSE  SC+  L+G+  +NPW +  VA+A+ + +T   ++R    + D E+   NTTA W    L
Sbjct:   28 DKTVFAGIDRMERLKGVPLKLLAFERFLEKNPTRAGNVVLYQISLAVRERGDDYSTTSAQVQALVNRINNKFGVNGEPVVIFDEVEETHLQLKHRLALLSVADVLLVTTVRDGLNRWPFEFVLAQAAMGGEGSEYLIKPP--------VPGVMVLSEFTSCTRVLQGALHINPWCIDEVAEALEDCMTMHPEERQKRLDMDLEYVTVNTTAAWCRQCL 237          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2F9H1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F9H1_9STRA)

HSP 1 Score: 125 bits (315), Expect = 5.800e-30
Identity = 72/218 (33.03%), Postives = 116/218 (53.21%), Query Frame = 1
Query:   22 DRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAK---HGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666
            D+ V AG++R+E++KGV LK+LAFE  L + P   G V ++++ +A   RG+DY      +  L  R+N K   +GE  V+++E +  +  L  R AL++V+ V + T V +GL+  P EF + Q                        PGV++LSE  SC+  L+G+  +NPW +  VA+A+ + +T   ++R    + D E+   NTTA W    L
Sbjct:  257 DKTVFAGIDRMERLKGVPLKLLAFERFLEKNPTRAGNVVLYQISLAVRERGDDYSTTSAQVQALVNRINNKFGVNGEPVVIFDEVEETHLQLKHRLALLSVADVLLVTTVRDGLNRWPFEFVLAQAAMGGEGSEYLIKPP--------VPGVMVLSEFTSCTRVLQGALHINPWCIDEVAEALEDCMTMHPEERQKRLDMDLEYVTVNTTAAWCRQCL 466          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: K8YR86_NANGC (Alpha,alpha-trehalose-phosphate synthase (UDP-forming) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YR86_NANGC)

HSP 1 Score: 126 bits (317), Expect = 9.730e-30
Identity = 78/246 (31.71%), Postives = 122/246 (49.59%), Query Frame = 1
Query:    1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGE---GTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQ-------EHRXXXXXXXXXXXXXXXXXXARA--------------PGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666
            +L++    R V+ G++R+E+I+G+ LK+LAFE  L+ +P+  G+V + +VGI    RG DY   +  + ++   +NA H +     VV+ ER+     L  R  L+A++ VF+ T   +GL+ +P+EF   Q       E                    A+               PGVLILSE VSC+  L G+  VNPWQ+    + MA A+   A++R A H  D  +  S T  +WA  +L
Sbjct:  590 KLRQQFAGRKVILGIDRLERIRGIPLKLLAFERFLATHPEWKGKVVLFQVGITASERGEDYPRTKREVRQMVTSINAAHADLPAPPVVFIERNERQMRLQDRMPLLAMADVFIVTSPRDGLNRMPLEFVAAQAVVVGGKEGGSASSSRRSSQVDLTAEGAAKGTVECPPPTEEDTPLPGVLILSEFVSCTRVLLGAMFVNPWQIEGTGELMARALGMSAEERLARHARDWRFVNSQTVLQWAYQIL 835          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2BW05_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BW05_9STRA)

HSP 1 Score: 122 bits (306), Expect = 2.790e-28
Identity = 72/225 (32.00%), Postives = 117/225 (52.00%), Query Frame = 1
Query:    1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHG---EGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666
            RL  L   R +  G++R+E++KGV LK+LAFE  L    +   +V +H++G++  AR  DY      +  L  R+N + G   E  V+Y+ER+ +   L  R  L++V+ V + T V +GL+  P E+ + Q  +                  +R PG++ILS+  SC+  L G+  VNPWQ+  VA+ +  +V   A++R    + D ++   NTTA W    L
Sbjct:  445 RLNCLKRGRTMFVGMDRMERLKGVPLKLLAFERFLENNEEYSKKVVLHQIGMSVRARPQDYEQTTAEVRALVKRINERFGDPQEPVVIYDEREESQLPLKDRLGLLSVADVLLSTTVRDGLNRWPFEYVLAQSQQQGPGSEYVE---------SRPPGIMILSDFTSCTRVLHGALHVNPWQIDQVANQILRSVMMSAEERMDRFKMDVDYVTLNTTATWCRRCL 660          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S2BXE3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BXE3_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.290e-27
Identity = 69/220 (31.36%), Postives = 114/220 (51.82%), Query Frame = 1
Query:   16 HGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHG---EGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666
               R +  G++R+E++KGV LK+LAFE  L    +   +V +H++G++  AR  DY      +  L  R+N + G   E  V+Y+ER+ +   L  R  L++V+ V + T V +GL+  P E+ + Q  +                  +R PG++ILS+  SC+  L G+  VNPWQ+  VA+ +  +V   A++R    + D ++   NTTA W    L
Sbjct:    4 EAGRTMFVGMDRMERLKGVPLKLLAFERFLENNEEYSKKVVLHQIGMSVRARPQDYEQTTAEVRALVKRINERFGDPQEPVVIYDEREESQLPLKDRLGLLSVADVLLSTTVRDGLNRWPFEYVLAQSQQQGPGSEYVE---------SRPPGIMILSDFTSCTRVLHGALHVNPWQIDQVANQILRSVMMSAEERMDRFKMDVDYVTLNTTATWCRRCL 214          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A7S3HP37_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HP37_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.490e-25
Identity = 68/228 (29.82%), Postives = 116/228 (50.88%), Query Frame = 1
Query:    7 KELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKH-----GEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVLGVL 675
            KE    ++VVAG++R+E++KG+ LK++A +  ++  P  +G++    +GI+   RG DYR  Q  +  +   +N K+      +  + +EER   +  LAQR    AV+ V + T   +GL+  P+EF + ++                        GV+++SE VS +  +RG+  VNPW+V+ V  A+  A+  E  +R      + E+ +  TTA WA  VL  L
Sbjct:  199 KERFAGKIVVAGMDRLERLKGIPLKLMAIDQFMAENPQWLGKIVFTLIGISAIERGQDYRQTQHDVKIMVRELNLKYLSNKNKDPLIYFEERADKDIRLAQRLPFFAVADVLMITSTRDGLNRYPMEFTLARQKHGEFADMKAAVGQPNQ-------GVVVISEFVSSARVMRGALNVNPWRVQEVKMALQRALEMEQGERADRTRRNLEYSQRLTTANWATQVLSDL 419          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A2R5GU15_9STRA (Alpha,alpha-trehalose-phosphate synthase UDP-forming 5 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GU15_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.880e-24
Identity = 67/214 (31.31%), Postives = 111/214 (51.87%), Query Frame = 1
Query:   25 RVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVL 666
            R ++ G++ VE ++G+ LK+LA + +   YP L  RV + ++G+   +R NDYR C + +  L   +  K G+  V YEERD  +  L +R AL+  + VF+ T V  G+  +P E+ + + +                       G ++LSE  +CS  L GS  VNP++  A+A  +  A++  A +RTA    D  + E NT A WA+ ++
Sbjct:  346 RQMLLGIDEVEGLRGLGLKLLALDRLFRDYPYLRERVVLKQIGLRLDSRPNDYRQCHDEVVGLVAHLQKKWGKHVVEYEERD--SIDLTERLALLQNADVFLNTSVRVGVDMLPFEYLMARRN---------------------PAGCIVLSEFSACSRVLHGSLRVNPFKTSALAATIEEALSMSAAERTARCARDLVYIERNTLADWADRII 536          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A835YZM5_9STRA (Glycosyltransferase family 20-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM5_9STRA)

HSP 1 Score: 107 bits (266), Expect = 6.300e-23
Identity = 75/245 (30.61%), Postives = 120/245 (48.98%), Query Frame = 1
Query:    4 LKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHE-------------VGIANPARGNDYRACQESLSELAGRMNAKHGEG---TVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQE-HRXXXXXXXXXXXXXXXXXXARAPGVLILSEA-----------VSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWA 654
            LK+ +  R V  G+++VE++KG+ LK++AFE ML   P+L  RV +               VG++   R +D+    + L  LA  +N K+  G    VVY ++D  + TL QR   + ++   V T V +GL+ +P+EF +    HR                   + PGV++LSE             SC   LRG+  +NPW+V  VA +MA  +    + R A H +D ++  ++TT+ WA
Sbjct:  672 LKQQYKGRFVFVGIDKVERLKGLPLKLMAFERMLEGDPELAERVCLXXXXXXXXXXXXXXXVGLSVHEREDDFEQSTKELISLATTINNKYSRGGRPVVVYTDKDEASFTLQQRLPYLCLADCLVNTAVRDGLNRLPLEFAIAHTVHRP------------------QCPGVVMLSEXXXXXXXXXXEFTSCMRVLRGAVRINPWKVDEVAASMAATLDMSLETRLARHAKDEDFVVNHTTSFWA 898          
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Match: A0A0P1AS38_PLAHL (Trehalose-phosphatase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AS38_PLAHL)

HSP 1 Score: 105 bits (263), Expect = 1.540e-22
Identity = 64/225 (28.44%), Postives = 104/225 (46.22%), Query Frame = 1
Query:    1 RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEVGIANPARGNDYRACQESLSELAGRMNAKHGEGTVVYEERDPNNATLAQRAALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRXXXXXXXXXXXXXXXXXXARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTAWHEEDAEWCESNTTAKWAEDVLGVL 675
            +L++ H  +V++AGV+  +++ G+ LKMLAFE   S  P    ++   E       R  D       +S+L  R+   HG G + YEE   +  T+ +R AL   S + + T +  GL+  P+EF   +                        PGV+ILSE  +C   L G+  VNPW +  + +++ NA+T   ++R      D  +  +   A W + VL VL
Sbjct:  648 KLRDKHAGKVLIAGVDVCQRLSGIPLKMLAFEQFFSNCPSWKDKLVFVERATLTQTRLGDQNYSSNEISKLVKRITKAHGPGCIDYEESS-SPLTIEERVALWLASDILMVTSIREGLNLKPLEFVFAK-----------------GVNSTDRPGVVILSEFSACCCVLNGAVRVNPWNITGLVNSLDNALTMSNEERLGRRARDLPYITNQPAANWTKQVLSVL 854          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13200.2501.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G011_ECTSI1.300e-10678.07Trehalose 6-phosphate synthase, family GT20 / Treh... [more]
A0A7S2AZP8_9STRA1.630e-3133.03Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2F9H1_9STRA5.800e-3033.03Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
K8YR86_NANGC9.730e-3031.71Alpha,alpha-trehalose-phosphate synthase (UDP-form... [more]
A0A7S2BW05_9STRA2.790e-2832.00Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2BXE3_9STRA1.290e-2731.36Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3HP37_9STRA1.490e-2529.82Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A2R5GU15_9STRA2.880e-2431.31Alpha,alpha-trehalose-phosphate synthase UDP-formi... [more]
A0A835YZM5_9STRA6.300e-2330.61Glycosyltransferase family 20-domain-containing pr... [more]
A0A0P1AS38_PLAHL1.540e-2228.44Trehalose-phosphatase n=1 Tax=Plasmopara halstedii... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13200contigL-elsbetiae_contig13200:1150..4789 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score346.3
Seed ortholog evalue1.1e-92
Seed eggNOG ortholog2880.D7G011
KEGG rclassRC00005,RC00017,RC00049,RC02748
KEGG koko:K16055
KEGG ReactionR02737,R02778
KEGG Pathwayko00500,ko01100,map00500,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.trehalose biosynthetic process
EggNOG OGsCOG1877@1,KOG1050@2759
EC2.4.1.15,3.1.3.12
COG Functional cat.G
CAZyGT20
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Ec32 ortholog descriptionTrehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase
Ec32 orthologEc-22_003320.1
Exons6
Model size684
Cds size684
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13200.2501.1prot_L-elsbetiae_contig13200.2501.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13200 1150..4789 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815499.941476-CDS-L-elsbetiae_contig13200:1149..12241622815499.941476-CDS-L-elsbetiae_contig13200:1149..1224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 1150..1224 -
1691682928.170881-CDS-L-elsbetiae_contig13200:1149..12241691682928.170881-CDS-L-elsbetiae_contig13200:1149..1224Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 1150..1224 -
1622815499.9646592-CDS-L-elsbetiae_contig13200:1780..19541622815499.9646592-CDS-L-elsbetiae_contig13200:1780..1954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 1781..1954 -
1691682928.181812-CDS-L-elsbetiae_contig13200:1780..19541691682928.181812-CDS-L-elsbetiae_contig13200:1780..1954Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 1781..1954 -
1622815499.980183-CDS-L-elsbetiae_contig13200:2454..25931622815499.980183-CDS-L-elsbetiae_contig13200:2454..2593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 2455..2593 -
1691682928.189802-CDS-L-elsbetiae_contig13200:2454..25931691682928.189802-CDS-L-elsbetiae_contig13200:2454..2593Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 2455..2593 -
1622815499.9919393-CDS-L-elsbetiae_contig13200:2989..30841622815499.9919393-CDS-L-elsbetiae_contig13200:2989..3084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 2990..3084 -
1691682928.1992612-CDS-L-elsbetiae_contig13200:2989..30841691682928.1992612-CDS-L-elsbetiae_contig13200:2989..3084Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 2990..3084 -
1622815500.0056937-CDS-L-elsbetiae_contig13200:3637..37071622815500.0056937-CDS-L-elsbetiae_contig13200:3637..3707Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 3638..3707 -
1691682928.2098646-CDS-L-elsbetiae_contig13200:3637..37071691682928.2098646-CDS-L-elsbetiae_contig13200:3637..3707Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 3638..3707 -
1622815500.0178235-CDS-L-elsbetiae_contig13200:4658..47891622815500.0178235-CDS-L-elsbetiae_contig13200:4658..4789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 4659..4789 -
1691682928.217814-CDS-L-elsbetiae_contig13200:4658..47891691682928.217814-CDS-L-elsbetiae_contig13200:4658..4789Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13200 4659..4789 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13200.2501.1

>prot_L-elsbetiae_contig13200.2501.1 ID=prot_L-elsbetiae_contig13200.2501.1|Name=mRNA_L-elsbetiae_contig13200.2501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=228bp
RLKELHGDRVVVAGVERVEKIKGVWLKMLAFEDMLSRYPDLVGRVSMHEV
GIANPARGNDYRACQESLSELAGRMNAKHGEGTVVYEERDPNNATLAQRA
ALMAVSSVFVKTPVHNGLSTVPIEFRVVQEHRRQQQQQQQQPKDEPPAAA
ARAPGVLILSEAVSCSPALRGSFLVNPWQVRAVADAMANAVTAEADDRTA
WHEEDAEWCESNTTAKWAEDVLGVLTTV
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mRNA from alignment at L-elsbetiae_contig13200:1150..4789-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13200.2501.1 ID=mRNA_L-elsbetiae_contig13200.2501.1|Name=mRNA_L-elsbetiae_contig13200.2501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=3640bp|location=Sequence derived from alignment at L-elsbetiae_contig13200:1150..4789- (Laminarionema elsbetiae ELsaHSoW15)
AGGCTGAAGGAACTGCACGGGGACCGTGTGGTGGTGGCCGGGGTCGAGAG GGTGGAGAAGATCAAGGGCGTGTGGCTCAAGATGCTGGCGTTCGAGGACA TGCTCAGTCGGTACCCCGACCTGGTCGGCAGGTGATGCCTGTTTAAGGGA CTTTGCTGCTGCTGCCGCTGCTGCTGCTGATGCTGATGCATTCTTGGTTG CATTTGTTGTTTTTTTGTCGTTTACTGACGACGAATTTGGTGTTGGTGCT GCTTATCATTGTTTTTGTTATGTTGACTGTTGCGTCGAGTGTTGTTGGTG TTTAGGAGAGTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTTCTTCTTG CGCGTTTTTTTTTTCGTCTTTTAATTTGTAAATACCTTTTTAAAACCCTT CCTGTTTTTTTGTCTCNNNNNNNNNNGGGTTGTGGTTGGGGGTGTTGTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGTGTTGTTGGTGTTTAGG GGTGTTTTTTTTTTTTTTTTTGTCATTTTGCTGCTGCTGCTGCTGCTGCT GGTTTGCTGCTATGAATGTCGTACATGCATGATTAACACCTGTCTTGTTT GCTGCTCTCAATGCTCGCGTGAGCTGCTGCTCTTATTCTTGCTGGAGGTG ATGCTAACGTTTAGCGTTGTTGCTGGTTCCCGTGAGGTTTGTCTCAGTGA CATCACACGAGTTGACTGTTGTGGGGAACAAACAACACTAGCCTTCTTTT TATCACGACTAAAGTCTATGGTGTGACGTCACAGGCTGGCGATTGTGGGA GTCAAACGACACCAGCCTTGTGTTACAATCACGACTAGATTTTTTATTAG TGACGCCATAGGTTGGCCTGTTGTGGGAAACAGACGGCACCCCGCCTTCT CTTATCACCACTAAATAGTCTATTGTTAGTGACGTCATGGGTTGGATGTT GTGGGAAACAGGCGACACCCCGCCTTCTTTTTGTCACGACTGCATAGAGT CTATTCATAGTGCCATCATAGGCTGATGCCAATGCTATTATTATTGTTGT TTTTTCTTGCTGATTTCGCTCAACCTCAACAGGGTGAGCATGCACGAAGT GGGCATCGCCAATCCTGCCAGGGGGAACGACTACAGGGCGTGCCAAGAGT CGGTAAGACCATCACCACCGTCGTCGATCTCGTGTTGTCAATCTCGCCTT ACCAATTTCGTGTTGCCAATATCGTGTTGTCAAAAAGGGTTGTCAATCTC GCCTTGTCAATTTCGTGTTGTCAATCTCGCCTTGTCAATCTCGCATTGTC AATCTGGCCTTGTCAATTTGGCGTAGCCAATCTCATGTTGTCAATCTCGC GTTTGTCAAATCGTGTTGTCAGTCTCGTGTTGTCAATCTCGCGCTGTCAC CAAATGCTATGGTACATGCAACCCGGTACTAGTTTAATGGTTTCCATCAC CAAGGTCACGATGTCTGATCGATGCTTAGTCGGTGCCTTCAACACCAGCT GTCAGCACTAAGATCTACCATGTTTTTTATTTCATTTTTTTTCCGCGGCC GTCGAGTGGTATGTGCCTTGTTTTGTGACACCACGGGCCCCGAAGGATGT TTTGGATTAGAGAGGTACATAATGTGAGAAACAACGACAGCAACAACTAT ACGATGCACGATGCTCGGTCGGTGTTTCCATTCAACATTGAACATTGAAC AACAGCTATCCGAGCTGGCGGGGCGAATGAACGCCAAGCACGGCGAGGGA ACCGTCGTCTACGAGGAGCGCGACCCAAACAATGCCACGCTCGCGCAGAG GTGTGTTCATTGTCTACTTATTTATCATCTGCGAGAGGTGTTTCTTGTCT TATGTTTCGGTTTTTCTTTTCTTCTGTTTTGTTTCCTTTGTTCCTTTGAT TCGCTTGGCACCAGAAAGGTCGATATTTCTCTTACCGTGCCCCCGCTATT TCATGCTGCGGTGCCGCCCTTACTGTATGTAGCCAGGAGAACGTTGGCGC GCGTCTCGTGTATTGAAAAGTTCGTTCTATTTAGGGGAAAGTTCTGCGAA AATTCTTCGAAGTTTCGTTGGTCGTGGAAGATAGATAACACGCGCCTTCG TTCACGCCGCTGCGATCGATCGATCACTGAACGCGAAACATGCCCGCACT GCATCATCGGCCGCGTGTGCTGTTTGTGTCTTGACTGTCGCATCAGGGCG GCGTTGATGGCGGTGTCCTCGGTGTTTGTCAAGACCCCGGTCCACAACGG CCTCAGCACTGTGCCCATCGAGTTCCGAGTGGTGCAGGAACACCGGCGGC AGCAGCAGCAGCAGCAGCAGCAGCCAAAAGACGAGGTGAACCATTATTTT TCGTCGTGACTAAGTTGATGCTGCTCACCTAAACCCAGCAAATGCAGCAA GACCGCTGCCCGTGGTCGGTCTCAAGAGTGCTAGAGCCGTATTAGAACCT TTGAAGAACAAAGCGCCTGTGACGTAAGTCTCATGGCCCCACTCCTTTTT CTTCTGTGTTTTATTCAGTTATTTTTGTATGTTTTATTCTTTTTTCTTCG TCACATTTATTTCCAGTGCTCGATGGGCTCCTCTGTCACGAGGGCATCTT GCTAGAGTACTGAACCGTGGGCACACAGAAGGGTTCCTTTCCCCGAGGCT CCCCAACTCCCCCCTTCTGCGATGCTTGCCTAAGATTTTTGTCGCGAAAA GGGTTCAGCCGTCCCTTTCCCTCGTCGATGGTGAGGTCGAAGTTTTGTGT ACGTGCGCGTACGCTGCAAGGAAACAAGCTGGAGCTTGCCTTGCCTTTCG CCTCGCCTCGCCTCGCCTTACAGCAGCTGGACAAGCCGCCAGCAGCAGCA GCACGAGCGCCCGGGGTTTTGATACTGTCGGAGGCGGTGTCGTGCTCGCC GGCCCTGAGGGGGAGCTTCCTGGTGAACCCCTGGCAGGTCCGGGCGGTGG CGGACGCCATGGCCAACGCTGTCACGGCAGAGGCCGACGACAGGACGGCG TGGCACGAGGTGCGTTTTATTTTCTAGTCCTTTCTTTTTTCCTTCCCATA ATTGGCTTATTCGTCGTCCGCCCCACTAGCCCCCTTCCTCCACTACGCCC TTCCTCCACTACGACTAGCTAGACGACCTAACCGGGGTGCGTATGCCATG TCACGTCATGTTGCGAATGTCATGCCCGTAAGTGGAGAATCTGAGGTTCG GGGGGGGTATACTAAACCGTTTAGGAAGTATTTAGTGTGGCACGAGGTGC TTGCCGTTGCTTTCATTTGTTGGCACGGAGGATGTGTGCATGCTGTTGTG GCAGGGGTGTGTGGATGTGTTGTCGTTTTCTTTTGTCGCACCTAGCACGC TCGTGCGTGCCTTTTGATGGCATGGGTGCGTGCACGAATGTATATATGTA CGATGCACATGAGCGCAGGCAGATAAGAGCCGCATCACTCGCGGCGTTAC CATACATCATGCATCCATGGCGGTGCACCACCCCCTCCAAAGAATCAAGC GCTGTCCCACACCCCGAGCTAAAACCCTAATGCTTCCTTATGGTAACATA CTTAATTTTTTTCAGGAGGATGCGGAGTGGTGCGAGTCTAACACGACGGC GAAGTGGGCGGAAGACGTATTAGGAGTCCTCACTACGGTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13200:1150..4789-

>mRNA_L-elsbetiae_contig13200.2501.1 ID=mRNA_L-elsbetiae_contig13200.2501.1|Name=mRNA_L-elsbetiae_contig13200.2501.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1368bp|location=Sequence derived from alignment at L-elsbetiae_contig13200:1150..4789- (Laminarionema elsbetiae ELsaHSoW15)
AGGCTGAAGGAACTGCACGGGGACCGTGTGGTGGTGGCCGGGGTCGAGAG
GGTGGAGAAGATCAAGGGCGTGTGGCTCAAGATGCTGGCGTTCGAGGACA
TGCTCAGTCGGTACCCCGACCTGGTCGGCAGAGGCTGAAGGAACTGCACG
GGGACCGTGTGGTGGTGGCCGGGGTCGAGAGGGTGGAGAAGATCAAGGGC
GTGTGGCTCAAGATGCTGGCGTTCGAGGACATGCTCAGTCGGTACCCCGA
CCTGGTCGGCAGGGTGAGCATGCACGAAGTGGGCATCGCCAATCCTGCCA
GGGGGAACGACTACAGGGCGTGCCAAGAGTCGGGTGAGCATGCACGAAGT
GGGCATCGCCAATCCTGCCAGGGGGAACGACTACAGGGCGTGCCAAGAGT
CGCTATCCGAGCTGGCGGGGCGAATGAACGCCAAGCACGGCGAGGGAACC
GTCGTCTACGAGGAGCGCGACCCAAACAATGCCACGCTCGCGCAGAGCTA
TCCGAGCTGGCGGGGCGAATGAACGCCAAGCACGGCGAGGGAACCGTCGT
CTACGAGGAGCGCGACCCAAACAATGCCACGCTCGCGCAGAGGGCGGCGT
TGATGGCGGTGTCCTCGGTGTTTGTCAAGACCCCGGTCCACAACGGCCTC
AGCACTGTGCCCATCGAGTTCCGAGTGGTGCAGGAACACCGGCGGCAGCA
GCAGCAGCAGCAGCAGCAGCCAAAAGACGAGGGCGGCGTTGATGGCGGTG
TCCTCGGTGTTTGTCAAGACCCCGGTCCACAACGGCCTCAGCACTGTGCC
CATCGAGTTCCGAGTGGTGCAGGAACACCGGCGGCAGCAGCAGCAGCAGC
AGCAGCAGCCAAAAGACGAGCCGCCAGCAGCAGCAGCACGAGCGCCCGGG
GTTTTGATACTGTCGGAGGCGGTGTCGTGCTCGCCGGCCCTGAGGGGGAG
CTTCCTGGTGAACCCCTGGCAGGTCCGGGCGGTGGCGGACGCCATGGCCA
ACGCTGTCACGGCAGAGGCCGACGACAGGACGGCGTGGCACGAGCCGCCA
GCAGCAGCAGCACGAGCGCCCGGGGTTTTGATACTGTCGGAGGCGGTGTC
GTGCTCGCCGGCCCTGAGGGGGAGCTTCCTGGTGAACCCCTGGCAGGTCC
GGGCGGTGGCGGACGCCATGGCCAACGCTGTCACGGCAGAGGCCGACGAC
AGGACGGCGTGGCACGAGGAGGATGCGGAGTGGTGCGAGTCTAACACGAC
GGCGAAGTGGGCGGAAGACGTATTAGGAGTCCTCACTACGGTAGAGGATG
CGGAGTGGTGCGAGTCTAACACGACGGCGAAGTGGGCGGAAGACGTATTA
GGAGTCCTCACTACGGTA
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