mRNA_L-elsbetiae_contig13179.2486.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5LIJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LIJ3_9PHAE) HSP 1 Score: 174 bits (442), Expect = 1.440e-45 Identity = 88/149 (59.06%), Postives = 110/149 (73.83%), Query Frame = 1 Query: 4 QSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLES-VTWPTGLEELVLDADLDVSV 447 ++RCLDAF++AL Q CEGG+KRWYASTLELQL SL+ C+ACR+ S L V VDD+T RSLW + + TRPN S + ISSRVP VRALRLTWAL M+ L++ AA+ELW WSE ++L G SL S V WP GL +LVL D D+++ Sbjct: 8 RTRCLDAFVIALSQACEGGEKRWYASTLELQLTSLDLCRACRTTSILHVHVDDQTPRSLWSSRTAQTRPNTR-SWNLHISSRVPVVRALRLTWALSMEALLRKAAIELWTWSERLELLGSSCVSSLGSEVVWPRGLTQLVLYTDSDIAM 155
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: D7G7F9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7F9_ECTSI) HSP 1 Score: 162 bits (411), Expect = 1.630e-45 Identity = 83/147 (56.46%), Postives = 97/147 (65.99%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELVLDADLDV 441 G +R DAF +AL Q CEGG+KRWY ST ELQL SL+ C+ACRS TL V V T SLW P PN S KVR+ SRVP VRALRLTWA M+ LVQ AA+ELW SE +++ G + A SL SV WP GL +LVLD D + Sbjct: 5 GYTRSFDAFAIALSQACEGGEKRWYTSTTELQLGSLDICRACRSTPTLHVRVTGGTPTSLWSPPTVQALPNTQ-SSKVRVVSRVPVVRALRLTWAFSMETLVQRAAIELWSRSERLEMVGPLCAASLGSVVWPLGLTQLVLDTDFHI 150
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5KLV1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE) HSP 1 Score: 141 bits (356), Expect = 7.310e-35 Identity = 79/149 (53.02%), Postives = 102/149 (68.46%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTW-PTGLEELVLDADLDVS 444 G+S CL AFIVAL Q C G +KRWYASTLELQL SLEFC ACR + TL V VD +T RSLW KS+ + S++ +S+RVPAV+A LTWAL M+VL+Q++AVEL S++ ++ G S SL S+ W L+ LV D+D+ S Sbjct: 13 GRSECLRAFIVALNQTCNGQEKRWYASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKR-SREACVSNRVPAVQASGLTWALDMEVLLQTSAVELRSRSKYRRVSGNSSTASLGSMFWLQMMLKRLVFDSDMPAS 160
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5KNI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE) HSP 1 Score: 144 bits (362), Expect = 3.640e-34 Identity = 77/148 (52.03%), Postives = 96/148 (64.86%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELVLDADLDVS 444 G S+CLDAF+VAL Q C+G +KRWY STLELQL SLE C ACR + TL V V +T SLW +++T N S KV ISSRVP V+A LTWALPM VL Q +A E+ S + SA SLES WP L+ +V ++D+ V+ Sbjct: 5 GNSKCLDAFVVALNQACDGQEKRWYVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNR-SPKVCISSRVPVVQAFGLTWALPMGVLQQRSATEVRSGSGCRRANTHSSAASLESAVWPQRLKRMVFESDMTVN 151
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5L1V9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1V9_9PHAE) HSP 1 Score: 134 bits (338), Expect = 5.690e-32 Identity = 72/141 (51.06%), Postives = 91/141 (64.54%), Query Frame = 1 Query: 4 QSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELVLD 426 Q RCLDAF+VAL Q EGG+KRWY STL+LQLASLEFC ACRS L V VD T +LW ++N S+RVPAV+A+ LTWA P + + SA+ ELW E +QL+ + +L+SV WP GL+ LV+D Sbjct: 6 QRRCLDAFVVALSQCYEGGEKRWYTSTLQLQLASLEFCGACRSTPMLHVYVDAETPPTLWSLGQANPTAGT--------STRVPAVQAVGLTWARPTESPLGSASSELWTRLESLQLQVSLCTANLDSVVWPQGLQRLVMD 138
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5KXX4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX4_9PHAE) HSP 1 Score: 133 bits (334), Expect = 6.290e-31 Identity = 77/176 (43.75%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISK---------------------------KVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELVLDADLDVSV 447 G SR DA I+A+ Q EG KRWY STLEL+LASLE C+ACR + T+ V VD T SLW TR + SK K RISSRVP +AL LTWALP ++L+Q AVELW EF+QLR +S L SV WP L+ L L+ + ++ Sbjct: 5 GASRGFDALIIAISQAYEGRGKRWYTSTLELRLASLETCRACRRVPTIHVRVDANTPPSLWSPHAMPTRAHTRSSKTRAXXXXXXXXXXXXXXXXXXXXXXXXKARISSRVPVGQALGLTWALPTEILLQGVAVELWTKLEFLQLRESLSPSDLVSVAWPQNLKRLALETGFEAAI 180
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: D7FTK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTK8_ECTSI) HSP 1 Score: 122 bits (305), Expect = 5.980e-29 Identity = 72/140 (51.43%), Postives = 85/140 (60.71%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELV 420 G LD IVAL Q C+G +KRWY STLELQL SLE C ACRS L V V + T +LW + S T P++ S +V S+RVPAV+AL TWALPMD L Q AA E +E G A S+ESV WP L+ LV Sbjct: 85 GGGSSLDTLIVALNQACDGQEKRWYVSTLELQLVSLELCGACRSAQLLHVFVREDTPPTLWSSRTSRTTPSQR-SPEVCTSNRVPAVQALCWTWALPMDRLPQRAAAEPQPVTERRLQDGHSFAASVESVVWPESLKRLV 223
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5K2L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2L2_9PHAE) HSP 1 Score: 116 bits (291), Expect = 2.430e-26 Identity = 65/147 (44.22%), Postives = 85/147 (57.82%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELVLDADLDV 441 G+ C+DAFIVAL + C+GG++RWYASTLELQ SLEFC ACR + T + + + V SR P VRA LTWAL MDVL+QS A+EL + S++ + G SA +L S+ W L+ LVL+ D V Sbjct: 15 GRGECVDAFIVALNRTCDGGEQRWYASTLELQPVSLEFCVACRRVPT--------------------SHSTSTVGRLVSGVSRAPVVRAYSLTWALSMDVLLQSCAMELQRGSKYRRSGGHSSAANLASMLWLQRLKRLVLELDTPV 141
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5K8K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K9_9PHAE) HSP 1 Score: 115 bits (288), Expect = 1.420e-24 Identity = 71/159 (44.65%), Postives = 91/159 (57.23%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAVRALRLTWALPMDVLVQSAAVELWKWSEFVQLRGVVSACS--------------------LESVTWPTGLEEL 417 G+S CLDAFIVAL Q +G KRWY STLELQL SLEFC ACRS + V + +T SLW +P+ + + S++ I SRVPAV+A WALPM++L+ +A EL + SE Q G SA S + SV+WP L+EL Sbjct: 25 GRSECLDAFIVALKQAGDGRAKRWYVSTLELQLVSLEFCGACRSALSFDVQIHRQTPHSLW-SPRKSHGTLKKRSREACIPSRVPAVQANGWMWALPMEILLPRSATELHQVSENRQPTGPSSATSPGRMGWFQKLTRLMFYSERSVNSVSWPACLQEL 182
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Match: A0A6H5KVM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVM8_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.280e-22 Identity = 52/87 (59.77%), Postives = 61/87 (70.11%), Query Frame = 1 Query: 1 GQSRCLDAFIVALGQLCEGGQKRWYASTLELQLASLEFCKACRSISTLAVSVDDRTVRSLWIAPKSNTRPNEDISKKVRISSRVPAV 261 G ++C DAF+VAL Q CEGG KR Y STLEL LASL+ C+A RS STL V V +T RS W PK RP+E S K+R+SSRVP V Sbjct: 18 GPTQCFDAFVVALSQACEGGNKRSYTSTLELPLASLDICRAGRSTSTLHVRVQYQTPRSFWSPPKVQLRPDEG-SSKIRLSSRVPVV 103 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13179.2486.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13179.2486.1 >prot_L-elsbetiae_contig13179.2486.1 ID=prot_L-elsbetiae_contig13179.2486.1|Name=mRNA_L-elsbetiae_contig13179.2486.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp MDVLVQSAAVELWKWSEFVQLRGVVSACSLESVTWPTGLEELVLDADLDVback to top mRNA from alignment at L-elsbetiae_contig13179:3579..4704+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13179.2486.1 ID=mRNA_L-elsbetiae_contig13179.2486.1|Name=mRNA_L-elsbetiae_contig13179.2486.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1126bp|location=Sequence derived from alignment at L-elsbetiae_contig13179:3579..4704+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13179:3579..4704+ >mRNA_L-elsbetiae_contig13179.2486.1 ID=mRNA_L-elsbetiae_contig13179.2486.1|Name=mRNA_L-elsbetiae_contig13179.2486.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1494bp|location=Sequence derived from alignment at L-elsbetiae_contig13179:3579..4704+ (Laminarionema elsbetiae ELsaHSoW15)back to top |