mRNA_L-elsbetiae_contig13160.2474.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13160.2474.1
Unique NamemRNA_L-elsbetiae_contig13160.2474.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: D8LMA4_ECTSI (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA4_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 1.090e-81
Identity = 120/176 (68.18%), Postives = 134/176 (76.14%), Query Frame = 1 
Query:    1 QDQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPSEEEMIDTVGAASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAFSGIKPG 528
            +DQLT+TG+KGFRMARATKGVSNGTWYWEC VL P+T EGHCRLGWSL  G LQGPVGYDK SYAYRD+AGSKVH+S R+DNYGEPWG GDVIGFLIRLKSP+ EE+IDTVGA+SDSGR  + AA                          +  NEIRFFKNGRDQGVA+S +KPG
Sbjct:  104 KDQLTVTGHKGFRMARATKGVSNGTWYWECAVLPPETTEGHCRLGWSLPAGKLQGPVGYDKFSYAYRDIAGSKVHDSHRSDNYGEPWGPGDVIGFLIRLKSPTPEEIIDTVGASSDSGRHGMTAAAAAAALAAGQSPSELAATAASDTAAGDPLNEIRFFKNGRDQGVAYSAMKPG 279
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A6H5JYI9_9PHAE (B30.2/SPRY domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYI9_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 9.460e-81
Identity = 122/176 (69.32%), Postives = 137/176 (77.84%), Query Frame = 1 
Query:    1 QDQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPSEEEMIDTVGAASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAFSGIKPG 528
            +DQLT+TG+KGFRMARATKGVSNGTWYWECTVL P+T EGHCRLGWSL  G LQGPVGYDK SYAYRD+AGSKVH+SLR+DNYGEPWG GDVIGFLI+LKSP+ EE+IDTVGA+SDSGR  + AA                          + FNEIRFFKNGRDQGVA+S +KPG
Sbjct:  106 KDQLTVTGHKGFRMARATKGVSNGTWYWECTVLPPETTEGHCRLGWSLPAGKLQGPVGYDKFSYAYRDIAGSKVHDSLRSDNYGEPWGPGDVIGFLIKLKSPTPEEIIDTVGASSDSGRNGMTAAAAAAALAAGQSPSELAATAASDTAAGDPFNEIRFFKNGRDQGVAYSAMKPG 281
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A835YSC8_9STRA (Concanavalin A-like lectin/glucanase domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC8_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.560e-40
Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 1 
Query:    1 QDQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPSE 312
            +DQLT+TG KGFRM RAT G S G WY+E  VL P   +GH R+GWS   G LQ PVGYD+ SYAYRD+AGS+VH SLR D YG P+G GDV+G  I L  PS+
Sbjct:   17 KDQLTVTGEKGFRMVRATAGASEGAWYFEVLVLPPARADGHVRIGWSTGAGDLQAPVGYDRHSYAYRDLAGSRVHASLRHDGYGAPYGPGDVVGAQIVLAGPSD 120
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A7S2MZN0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MZN0_9EUKA)

HSP 1 Score: 118 bits (295), Expect = 3.470e-31
Identity = 56/100 (56.00%), Postives = 74/100 (74.00%), Query Frame = 1 
Query:   10 LTITGNKGFRMARATKGVSNGTWYWECTVL-SPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSP 306
            LT  G KG+RM RAT GVS GT+++E  V  S ++++GH R+GW   +G +Q PVGYD++SY+YRDV GSK HES+ TD YGE +G GDVIG L+R+  P
Sbjct:    8 LTAIGYKGYRMVRATHGVSRGTYFYEVKVCDSLNSEDGHARIGWCTESGDVQAPVGYDQNSYSYRDVNGSKFHESIGTD-YGEAYGPGDVIGCLLRVGEP 106
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A1V9ZS82_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZS82_9STRA)

HSP 1 Score: 120 bits (302), Expect = 9.940e-31
Identity = 72/182 (39.56%), Postives = 93/182 (51.10%), Query Frame = 1 
Query:    1 QDQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPSEEEMIDTVGA------ASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAFSGIKPG 528
            +D LT++G+KG+ MARA  GV  GT+Y+E  +L P   E H R G+      +  P G+D+ SYAYRD+ G+ VH+S R D YG P+G GDV+G LI L  P E     TVGA       SD  R   A+A                          +    IRFF NG+DQGVAF  +  G
Sbjct:   45 EDGLTLSGSKGYCMARANCGVKYGTYYYEL-MLQPAESEYHVRFGYGTKKADINAPAGFDEYSYAYRDLNGACVHKSTRRDAYGAPFGPGDVVGALISLPKPCENSCGATVGAPEDMPPGSDECRSDAASA--------------------------HLAGTIRFFVNGKDQGVAFDDVPCG 199
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A2Z7BXL4_9LAMI (B30.2/SPRY domain-containing protein n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7BXL4_9LAMI)

HSP 1 Score: 123 bits (308), Expect = 7.080e-30
Identity = 74/177 (41.81%), Postives = 98/177 (55.37%), Query Frame = 1 
Query:    1 QDQLTITGNKGFRMARATKGVSNGTWYWECTVLS-PDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPSEEEMIDTVGAASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAFSGIKPG 528
            +D+LT +  KG+RM RAT+GV+ G WY+E  V+   DT  GH RLGWS   G LQ PVG+D +SY YRD+ GSKVH++LR    GE + EGDVIGF I L +     + D +   S+ G+L  +AA                         A   +E+ FFKNG  QG+AF  +  G
Sbjct:  249 EDRLTASTTKGYRMVRATRGVTEGAWYFEIKVVHLGDT--GHTRLGWSTDKGDLQAPVGFDGNSYGYRDIDGSKVHKALREKYGGEGYKEGDVIGFYINLPNGGSY-VPDPLCLDSNKGQLCASAAGTEEDPLK-----------------AVPGSELSFFKNGICQGIAFRDLYAG 405
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A0D2WJG6_CAPO3 (Ash2-like protein n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJG6_CAPO3)

HSP 1 Score: 124 bits (312), Expect = 7.610e-30
Identity = 78/178 (43.82%), Postives = 94/178 (52.81%), Query Frame = 1 
Query:    4 DQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKS---PSEEEMIDTVGAASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAFSGIKPG 528
            ++LTITG KG+  ARA  GV  G WY+E  VL P  +EGH RLGWS   G+LQGPVG+D  SY+YRDV GS+ HES R   YG+ +G GDVIG LI L +   PS +E+      A D G L                                    I FFKNG+ QGVA+S I  G
Sbjct:  387 NRLTITGEKGYSAARAAVGVDKGCWYFEVNVLKP-VEEGHARLGWSQKYGNLQGPVGFDSFSYSYRDVDGSRFHES-RGQPYGQGYGPGDVIGLLIDLPTTAQPSTDEL------ARDFGTLVDYKGFVYYEENVTVPKQHPEPLQASC---------IEFFKNGKSQGVAWSNIGQG 547
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A176VX76_MARPO (B30.2/SPRY domain-containing protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VX76_MARPO)

HSP 1 Score: 120 bits (301), Expect = 1.380e-28
Identity = 76/185 (41.08%), Postives = 96/185 (51.89%), Query Frame = 1 
Query:    4 DQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPS------EEEMIDTVG----AASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAFSGIKPG 528
            D+LT +G+KG+RM RAT+GV  G WY+E  V +     GH RLGWS   G +Q PVGYD  SYAYRDV GSKVH +LR + YGEP+ EGD IGF I L   +      EEE++   G      +D     V+ +                              EI +F+NG  QGVAF+ I  G
Sbjct:  191 DRLTASGSKGYRMVRATRGVVEGAWYFEIIVQNLGLT-GHTRLGWSSRRGDIQAPVGYDAHSYAYRDVDGSKVHCALR-EPYGEPYVEGDCIGFYINLPREANYTRKAEEEVVGWKGQPYFVVADEPLKPVSGS------------------------------EILYFRNGVSQGVAFTDINDG 343
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A024UV37_9STRA (B30.2/SPRY domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV37_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.310e-28
Identity = 61/172 (35.47%), Postives = 90/172 (52.33%), Query Frame = 1 
Query:    4 DQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPSEEEMIDTVGAASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAFSGI 519
            D +T++G KGF MAR   GV  GT+Y+E  +L P  +  H R+GW    G +  PVG+D+ SY YRD+ G   H+S R+D YGE +G GD++G LI +   + E+  +    +   GR + ++                           +  + IRFF NGRDQG+AF G+
Sbjct:   55 DGVTVSGTKGFCMARTNVGVKKGTYYFEIKLL-PAAEAYHVRVGWGTKKGDINAPVGFDEHSYGYRDIGGETTHKSKRSDRYGESFGVGDIVGTLICVNWEAGEKKAEGATPSPLPGRFAPSSLSKQSSDLVAVSSPRR----------VDDASYIRFFVNGRDQGMAFEGM 215
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BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Match: A0A7S0TCR8_9STRA (Hypothetical protein n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TCR8_9STRA)

HSP 1 Score: 113 bits (283), Expect = 4.830e-28
Identity = 63/171 (36.84%), Postives = 83/171 (48.54%), Query Frame = 1 
Query:    1 QDQLTITGNKGFRMARATKGVSNGTWYWECTV-LSPDTKEGHCRLGWSLSTGSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLKSPSEEEMIDTVGAASDSGRLSVAAAXXXXXXXXXXXXXXXXXXXXXXXGGANAFNEIRFFKNGRDQGVAF 510
            +D L++TG+KG+RMARA  GVS G WY+E  +  S +  +GH R+GW+     LQ  VG+D+  + YRD AGS  H+S R DNYGE +G GDV+G +I L                                                       N IRFF+NG+DQGVAF
Sbjct:   26 KDGLSLTGDKGYRMARAVIGVSEGCWYFESVIGESKNGDQGHYRVGWATKEAELQASVGFDRFGFGYRDTAGSLCHDSNREDNYGEAYGPGDVVGCMISLGKTG---------------------------------------------------NHIRFFRNGKDQGVAF 145
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13160.2474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMA4_ECTSI1.090e-8168.18B30.2/SPRY domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JYI9_9PHAE9.460e-8169.32B30.2/SPRY domain-containing protein n=1 Tax=Ectoc... [more]
A0A835YSC8_9STRA3.560e-4061.54Concanavalin A-like lectin/glucanase domain-contai... [more]
A0A7S2MZN0_9EUKA3.470e-3156.00Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A1V9ZS82_9STRA9.940e-3139.56B30.2/SPRY domain-containing protein n=1 Tax=Achly... [more]
A0A2Z7BXL4_9LAMI7.080e-3041.81B30.2/SPRY domain-containing protein n=1 Tax=Dorco... [more]
A0A0D2WJG6_CAPO37.610e-3043.82Ash2-like protein n=1 Tax=Capsaspora owczarzaki (s... [more]
A0A176VX76_MARPO1.380e-2841.08B30.2/SPRY domain-containing protein n=2 Tax=March... [more]
A0A024UV37_9STRA2.310e-2835.47B30.2/SPRY domain-containing protein n=1 Tax=Aphan... [more]
A0A7S0TCR8_9STRA4.830e-2836.84Hypothetical protein n=1 Tax=Chrysocystis fragilis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13160contigL-elsbetiae_contig13160:236..4941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score253.8
Seed ortholog evalue5.7e-65
Seed eggNOG ortholog2880.D8LMA4
Preferred nameASH2L
KEGG koko:K13113,ko:K14964,ko:K14967
KEGG Pathwayko04212,ko04934,map04212,map04934
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000723,GO:0000785,GO:0000790,GO:0000791,GO:0000902,GO:0000904,GO:0001067,GO:0001932,GO:0001933,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002520,GO:0002682,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005719,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006355,GO:0006357,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0007444,GO:0007472,GO:0007474,GO:0007476,GO:0007552,GO:0007560,GO:0007568,GO:0008013,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008284,GO:0008340,GO:0008757,GO:0009058,GO:0009059,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009793,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009965,GO:0009987,GO:0010016,GO:0010033,GO:0010154,GO:0010228,GO:0010259,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0014070,GO:0016043,GO:0016070,GO:0016278,GO:0016279,GO:0016358,GO:0016458,GO:0016567,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018024,GO:0018130,GO:0018193,GO:0018205,GO:0019219,GO:0019220,GO:0019222,GO:0019438,GO:0019538,GO:0019787,GO:0019899,GO:0022008,GO:0022414,GO:0022607,GO:0030030,GO:0030097,GO:0030154,GO:0030182,GO:0031056,GO:0031057,GO:0031058,GO:0031060,GO:0031062,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031401,GO:0031490,GO:0031497,GO:0031507,GO:0031974,GO:0031981,GO:0032200,GO:0032259,GO:0032268,GO:0032269,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032774,GO:0032989,GO:0032990,GO:0032991,GO:0033043,GO:0033044,GO:0033127,GO:0033128,GO:0033554,GO:0033993,GO:0034401,GO:0034641,GO:0034645,GO:0034654,GO:0034708,GO:0034968,GO:0035075,GO:0035097,GO:0035107,GO:0035114,GO:0035120,GO:0035209,GO:0035220,GO:0035239,GO:0035295,GO:0036211,GO:0036314,GO:0040029,GO:0042054,GO:0042127,GO:0042221,GO:0042325,GO:0042326,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0043627,GO:0043933,GO:0044085,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0044665,GO:0044666,GO:0045595,GO:0045637,GO:0045652,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0048096,GO:0048188,GO:0048189,GO:0048316,GO:0048366,GO:0048367,GO:0048468,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048563,GO:0048569,GO:0048608,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048812,GO:0048813,GO:0048827,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051568,GO:0051569,GO:0051571,GO:0051716,GO:0060249,GO:0060255,GO:0060290,GO:0060322,GO:0060429,GO:0060562,GO:0060776,GO:0061458,GO:0061630,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070647,GO:0070828,GO:0070868,GO:0070869,GO:0071103,GO:0071339,GO:0071704,GO:0071840,GO:0080090,GO:0080182,GO:0090304,GO:0097159,GO:0097305,GO:0097549,GO:0097659,GO:0098687,GO:0099402,GO:0120036,GO:0120039,GO:0140096,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901576,GO:1901654,GO:1901700,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1903706,GO:1904837,GO:1905268,GO:1905269,GO:1905392,GO:1990188,GO:1990234,GO:2000026,GO:2000112,GO:2000113,GO:2001141,GO:2001251,GO:2001252
EggNOG free text desc.euchromatin binding
EggNOG OGsKOG2626@1,KOG2626@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko03041
Exons4
Model size528
Cds size528
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13160.2474.1prot_L-elsbetiae_contig13160.2474.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13160 236..4941 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815495.5279558-CDS-L-elsbetiae_contig13160:235..3121622815495.5279558-CDS-L-elsbetiae_contig13160:235..312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 236..312 +
1691682926.371173-CDS-L-elsbetiae_contig13160:235..3121691682926.371173-CDS-L-elsbetiae_contig13160:235..312Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 236..312 +
1622815495.540596-CDS-L-elsbetiae_contig13160:1595..17371622815495.540596-CDS-L-elsbetiae_contig13160:1595..1737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 1596..1737 +
1691682926.3818793-CDS-L-elsbetiae_contig13160:1595..17371691682926.3818793-CDS-L-elsbetiae_contig13160:1595..1737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 1596..1737 +
1622815495.5504434-CDS-L-elsbetiae_contig13160:3715..38191622815495.5504434-CDS-L-elsbetiae_contig13160:3715..3819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 3716..3819 +
1691682926.3916197-CDS-L-elsbetiae_contig13160:3715..38191691682926.3916197-CDS-L-elsbetiae_contig13160:3715..3819Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 3716..3819 +
1622815495.5640082-CDS-L-elsbetiae_contig13160:4736..49411622815495.5640082-CDS-L-elsbetiae_contig13160:4736..4941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 4737..4941 +
1691682926.4000905-CDS-L-elsbetiae_contig13160:4736..49411691682926.4000905-CDS-L-elsbetiae_contig13160:4736..4941Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13160 4737..4941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13160.2474.1

>prot_L-elsbetiae_contig13160.2474.1 ID=prot_L-elsbetiae_contig13160.2474.1|Name=mRNA_L-elsbetiae_contig13160.2474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=176bp
QDQLTITGNKGFRMARATKGVSNGTWYWECTVLSPDTKEGHCRLGWSLST
GSLQGPVGYDKSSYAYRDVAGSKVHESLRTDNYGEPWGEGDVIGFLIRLK
SPSEEEMIDTVGAASDSGRLSVAAAAAALAAGKSPSERAATAAAAVAAGG
ANAFNEIRFFKNGRDQGVAFSGIKPG
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mRNA from alignment at L-elsbetiae_contig13160:236..4941+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13160.2474.1 ID=mRNA_L-elsbetiae_contig13160.2474.1|Name=mRNA_L-elsbetiae_contig13160.2474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4706bp|location=Sequence derived from alignment at L-elsbetiae_contig13160:236..4941+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGATCAACTCACCATCACCGGCAACAAAGGCTTTCGTATGGCGCGGGC
AACGAAGGGTGTGTCCAACGGGACATGGTGAGTCTCCGCTCTTCCGCCAC
CTCCGCTTTGGCATACTTGTTGCCCATCCGTTTGCTTTATATAACCCCCT
CAGGACACCACAAGGCGTACGGGGCCACTTTCCCCCCCCCCGAGTGACAT
GCCAAACTCTTCGACCCCCTTTTTCACCACGCGACCCCAATTCCTTCTCT
GGAATCCCTATTGAATGGCCCCAGATGGTTTTGGGGCCATTCAATGGGGA
TTTTAGGTTTGGGATCAGTCACAGGGGACTGTTGTGAGTAAGATCCAATC
ACAGCTCTGGAAAAAACAGAAAAGTGTTGGCTAAACGCAATTCTTGCCGC
TTTCTTCGGGGGAACTACGGGCGACATGAGCCCGCCTGAGTCTCAGCTAT
GTTTGTTGGTTGTTTGCTACGAGCAGGACCGGACGTAGCTATGCAGCCTC
CGTGCGTCGTTTTGGCCTGTCTCGCGAGAAGAGGCGGGAGGGGCGACGTG
TCTGCTCTGCTCGCGGTATAGGGCTATTTAGTAAGGCCATGTGTGTACTT
TCAAACCGATTCATCTGGGCTAGTCCTCAGGGCTTTTTTTGCGAGATGAT
TCCGCCCTCTGGTGGGCCACCGCTCATATAACACCACCACACTTTGCCGC
CACCAACACGATCAAGAGCGCTACCGGCACCGTCACCACCAGCAACGACA
ACGATGACAACAGCGACACCAAAAATAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACATGCCACTCTT
TTAACTGTCAATCAACGATAGCAAACGATGGCCGACGCTCAGCTGCAGCA
CACTAAATAGCTCCCGAGGTTCTAGTGTTGGTGCTTATTTCTCGGACGTT
GTGCCTGTTCCACGCGAAACGCCACCACGACCACCGACAACGACAGGCCA
GATTATGCCACTGCTGTAATAAAACTAACAATGATGCTACCACCACCATC
ACCACCACCACTGACAACAACAACACCGACAACATCAGCCACATCATGCC
ACCATAAAACTGTCTATAATGCTACCCTACCACCACCAACAACAACAACG
ACGACAATATCAGCCACATCATGCCACTATTTTAAAAACAACAGTAATGC
TTACCACCACCACTACCACCACCGCCGCCGCCGCCAACGACAACTTCAGC
TACATCATGCCACCATAAAACCAACAATAACGCTACGACCACTACCACCA
ACAACACCGCCAACAACACCAACAACAACAACAACACCATCATCATGCCA
ACAACAACAGGTATTGGGAGTGCACGGTTCTGTCGCCGGACACGAAGGAG
GGCCATTGCCGGCTTGGATGGTCCCTCTCCACGGGAAGCCTCCAGGGGCC
CGTCGGATACGACAAGTCCAGCTACGCCTACAGAGATGTCGCCGGCTCCA
AGGTATGTGTGTGTGTGGGGGGGGGTTGCAGTGGCTCGCTAATTTAGGAT
GCACTATTTACGCATACATACCGGGGGCGCCGTGTAGATGGACTGAAATT
GCGGTGTGTTGAAGCGACGGCGGTGGCTTTGCGCGGCCAGACAAAAAGAG
AGGCATGTGAACCGCGTGCTCGTAATGGAGCAGGCCGGATGTGATTGATG
GTGTGCTTGTGCGAGGGGCGCGGCTTTGACGTGGAAGTCGGAGGGGGCGT
GCGTACACCCAGACGAGAGAGTAAATGCACGATATATACTTCTATATTGC
AGCTACCGTAGGTGACATAAGATAAGACACCCCCTGGACCGATTTTCAAA
GCTCGAGTACTCCACAGCAGCAAGGAGAGCGTCAGTCCCGAAAAGTGCGG
CGGCGTTGGAAAGATCTCGTCGAGAGCTTTCCGAAAACGTGGCGTTTGTG
GTTAGAATCGTATTCGTTGCGGAGTAACCAAGCTTTCAATATCGGTCCAG
GGGGGTGTCTTTATCTTATGTCACCTACGGTACGCAGCAGGATCCGCAAG
GAGCCTGATGGTTGTCGAAGTTCCGTGACAGTCCCGCGACAGTCCCGTTG
TTGTTGTTTCGTGACAGTCCCGTTGTTGTTTTTTTTTCTTCACTTTAAAA
ACCGCTGTTGATGTTGTTTCGTGACAGTCCCGTTGTTGGTGTTGTTTTTT
CTTCACACTCAAAACCGTTTCGATCTCTCCGCCCAGTATCCTCCTGCCTA
TGTCCGTACTATGTACGGTAGTACTCCAACACTAGATCGCGGCCAATTCC
CGTGGTCGCAGGCCAAATTATACTTGAGAGAAGGCGTAAACACGAACATA
AAACGGACCCGAATGGCGGGCAAAGCGATACAAATCAAAGACAAATGGTG
TGGAGCCCCCCGCCCCCCTCTACACGCTATGCGAGGTAGAAACAAAACTG
GATAAGCCAAAATCACCAACCAGGGGTATACACCGCAGGAGGGGGTCCAC
CCCCCCCTCCCCGCCTGCGTGACCCCGGTTGGGCTGTCTAGCTAGTGGTA
GTGGAGTATGGGGGCGCCTGTGGGACAGGCGACGAATATGCCAATATAAA
AGTGAGAGAACAAACATTTTAGGTTGTTTTTCTGCTCGCTTCGCCAAATA
TTACGCCACTCTGCATGGAATACCGTTTGAACCCCATATCGAGTCCTTGC
TCTAGTGTGGGGTAAATACATAGGTTCCATCTTTGATTCATTGTATATTT
TCAAAAAAAAGAAAACTGGTTCTATCTTGGGTACCCTAACAATTACACGG
TGCTCCGTGCCGGGCTCTCGCCGGTCAGGCCCACAGACCTACCGTAGGTG
GCACAAGATACCACACCCCCTGGACAGATTTTCAAAGCTCGGTTCCTCCC
CAGCGAGAAGAATGACAGTGCCGAAAGGGGTGGCTTTGAAAGATCTAGTC
GAGGGTGATCCGAAAATGTGTTGTTTGGAGCTGGCACCTTCTTCGCTACG
GAGTAATCGAGCTCTAAAATATTCGATCCAGGGGGTGTGGTATCTTGTGT
CACCTACGGTAGTCCTTCCCACCGAATTTACCGCCCAAATGATATGAACA
CAAGAGAGGGCAAAAGTGGGCTCGGGGATTGGCCGGCGGACAGCAGTAGT
GGTGGTACCCTTCCAGACCTCTTGCCTTTTGCTCCTGCGGCAGCACGCGA
TAACCTTTATTCCAAAATATTGTGTTTCCATACCGGAGGCAGCGGCAGCA
GCAGCAGCAGCAGCTATAGACCGACTTTGTCGATTTGTTTTTACAACCTT
TATTCCGAAATGTTTTGTTTTTCCATACCGGAGGCGGCGGCAACAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCGGCAGCGGCAACAG
CTGTAGACCGACTTTGTCGTTTTTGTTGTCCGTTTTTTTTTTCTTCACGG
CCTCACTCACTCGCGCTCCGCGGTGCGCAGGTCCACGAGTCGCTGCGGAC
GGACAATTACGGGGAGCCCTGGGGAGAGGGGGACGTCATAGGGTTCCTGA
TCAGGCTCAAGTCGCCCAGCGAGGAGGAGATGATGTGGGTTGTTGTGGCT
CGAGTGAAGGGCAGACCTTTTTAATTAACGTACATATGCAAATGTCATTT
TTAGGGTAATTGTCCTGTGACCACGGGAACTGAATCGACCGCGTCGGTGT
TGGATTAGTAGGGACTCTTGGAGGTGTACTGGATAAATAGAGAGATCGGA
ACGGTTTTTAACGCGAAGACAACAACAACAACAACAACAACAACAACAAC
AACAACAACGACAACCGACAACAACAAACAACAACGATACAAATGTGAGC
AGTCTATTTACGTCCAGTCTGTGAAAAGGTCGTTCCAGAGGGACTTCTTG
TTGTAGGCATACTAACCCCCTTTTTCGGGCCCAAGATATACTCGGCGCAC
ATTTCTCTTTTTTTTTCTTCGTTGGATTTTTGTCTTCAACAAAAATTACA
GGCAGGATTCGCTGTATTGTACCGGCTGTGAGTTGCATGTTTTCGATGCG
AAGCGGCGGCGGCGGCGGCGGTGGTTGTTTGAAAAACGGCATTTTCCGTC
ACGTTTTTTCCACCTCTGCTGGGTCTGTGGGCTGTTCACGGCGCCCCCAG
GGCTTTTGCTCGGGATGGGCATGGTGTTGTTATCCGAGATGCGGCGACCG
CGACACTTGCTGTAGTTTTTTTAGTTCATGTTTGCCGCTCGCTCCGTCCG
GAGGGCAAAACGCTTTTTGGAACGCCTCACACCCTCGGTCTCGGCCCCTC
CCCAGCCCTTTCCCCGTGCTGCACCACCCGGCTGTCCACTACCTGCCTTC
TTTCGCGAAGCCAATTTCTTCGATACTACTGACTGCCGTGCTCCGTATTA
AATAAGCCCTCATGCCCCCCCCCCCCCTCCCATCCCCACGCCGCCCCCTC
CTCGCCCCACCTCCTGTTTTCCAATTGTTCTGGCTGGACAATCACCCCCA
GTGACACAGTCGGCGCCGCCTCCGACTCCGGCAGGCTGAGCGTCGCGGCG
GCGGCGGCGGCGCTGGCGGCCGGGAAGTCTCCGAGCGAGCGGGCAGCGAC
GGCGGCCGCGGCGGTCGCGGCCGGCGGCGCCAACGCCTTCAACGAGATCC
GGTTCTTCAAGAACGGCAGGGACCAGGGGGTCGCGTTCAGCGGGATAAAG
CCGGGT
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13160:236..4941+

>mRNA_L-elsbetiae_contig13160.2474.1 ID=mRNA_L-elsbetiae_contig13160.2474.1|Name=mRNA_L-elsbetiae_contig13160.2474.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1056bp|location=Sequence derived from alignment at L-elsbetiae_contig13160:236..4941+ (Laminarionema elsbetiae ELsaHSoW15)
CAGGATCAACTCACCATCACCGGCAACAAAGGCTTTCGTATGGCGCGGGC
AACGAAGGGTGTGTCCAACGGGACATGCAGGATCAACTCACCATCACCGG
CAACAAAGGCTTTCGTATGGCGCGGGCAACGAAGGGTGTGTCCAACGGGA
CATGGTATTGGGAGTGCACGGTTCTGTCGCCGGACACGAAGGAGGGCCAT
TGCCGGCTTGGATGGTCCCTCTCCACGGGAAGCCTCCAGGGGCCCGTCGG
ATACGACAAGTCCAGCTACGCCTACAGAGATGTCGCCGGCTCCAAGGTAT
TGGGAGTGCACGGTTCTGTCGCCGGACACGAAGGAGGGCCATTGCCGGCT
TGGATGGTCCCTCTCCACGGGAAGCCTCCAGGGGCCCGTCGGATACGACA
AGTCCAGCTACGCCTACAGAGATGTCGCCGGCTCCAAGGTCCACGAGTCG
CTGCGGACGGACAATTACGGGGAGCCCTGGGGAGAGGGGGACGTCATAGG
GTTCCTGATCAGGCTCAAGTCGCCCAGCGAGGAGGAGATGATGTCCACGA
GTCGCTGCGGACGGACAATTACGGGGAGCCCTGGGGAGAGGGGGACGTCA
TAGGGTTCCTGATCAGGCTCAAGTCGCCCAGCGAGGAGGAGATGATTGAC
ACAGTCGGCGCCGCCTCCGACTCCGGCAGGCTGAGCGTCGCGGCGGCGGC
GGCGGCGCTGGCGGCCGGGAAGTCTCCGAGCGAGCGGGCAGCGACGGCGG
CCGCGGCGGTCGCGGCCGGCGGCGCCAACGCCTTCAACGAGATCCGGTTC
TTCAAGAACGGCAGGGACCAGGGGGTCGCGTTCAGCGGGATAAAGCCGGG
TTGACACAGTCGGCGCCGCCTCCGACTCCGGCAGGCTGAGCGTCGCGGCG
GCGGCGGCGGCGCTGGCGGCCGGGAAGTCTCCGAGCGAGCGGGCAGCGAC
GGCGGCCGCGGCGGTCGCGGCCGGCGGCGCCAACGCCTTCAACGAGATCC
GGTTCTTCAAGAACGGCAGGGACCAGGGGGTCGCGTTCAGCGGGATAAAG
CCGGGT
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