mRNA_L-elsbetiae_contig1311.2451.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: D8LNM1_ECTSI (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNM1_ECTSI) HSP 1 Score: 230 bits (587), Expect = 6.940e-74 Identity = 112/119 (94.12%), Postives = 115/119 (96.64%), Query Frame = 1 Query: 1 QVGEQRAADRFSRETLDNLQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMFPG 357 +VGEQRAADRFS E L N+QFVQADAEALPF+DNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIP IGQVVAKDRDAYQYLVESIRMFPG Sbjct: 185 EVGEQRAADRFSPEILTNMQFVQADAEALPFEDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPTIGQVVAKDRDAYQYLVESIRMFPG 303
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A7S2B1A4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1A4_9STRA) HSP 1 Score: 176 bits (446), Expect = 3.420e-54 Identity = 86/117 (73.50%), Postives = 99/117 (84.62%), Query Frame = 1 Query: 4 VGEQRAADRFSRETLDNLQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMFP 354 VG+QRA RFS ETL+ + + +A+AE LPFDD++F LYTIAFGLRNVTD D ALR+A+RVLKPGGRFMCLEFS+V EPLQ YD YSFNVIPAIGQ+VA DR +YQYLVESIR FP Sbjct: 25 VGQQRAGGRFSNETLERVSWQEANAERLPFDDDTFDLYTIAFGLRNVTDTDAALRDAYRVLKPGGRFMCLEFSKVGKEPLQSMYDAYSFNVIPAIGQIVAGDRSSYQYLVESIRTFP 141
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A7S2RGM1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGM1_9STRA) HSP 1 Score: 165 bits (418), Expect = 1.330e-50 Identity = 79/114 (69.30%), Postives = 97/114 (85.09%), Query Frame = 1 Query: 16 RAADRFSRETLDNLQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMFPG 357 R A+RFS E LD++ FV+A+AE LPF+DNSF +YTIAFGLRNVT +D+AL++A RVLKPGGRF+CLEFS V PL++ YD YSFN+IP IGQ+VA DRD+YQYLVESIR+FP Sbjct: 1 RDAERFSPELLDHVSFVEANAETLPFEDNSFDVYTIAFGLRNVTKIDQALKDALRVLKPGGRFLCLEFSHVHPAPLRQLYDLYSFNLIPPIGQLVAGDRDSYQYLVESIRLFPN 114
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: B7G2U2_PHATC (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2U2_PHATC) HSP 1 Score: 162 bits (409), Expect = 8.900e-47 Identity = 82/119 (68.91%), Postives = 99/119 (83.19%), Query Frame = 1 Query: 4 VGEQRAADRFSRETLDN---LQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMF 351 VG+ RA RF LD+ L+F+Q +A+AL F+DNSF LYTIAFGLRNVTDVD ALREA+RVLKPGGRF+CLEFS+VP E L+ YD YSF+VIPA+GQ+VA+DR++YQYLVESIR F Sbjct: 168 VGDVRARKRFGNSLLDDSRGLRFMQGNAQALEFEDNSFDLYTIAFGLRNVTDVDMALREANRVLKPGGRFICLEFSQVPNELLRTIYDTYSFHVIPAMGQIVAQDRESYQYLVESIRRF 286
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A0F2R8C3_9PROT (Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Rhodospirillaceae bacterium BRH_c57 TaxID=1629718 RepID=A0A0F2R8C3_9PROT) HSP 1 Score: 158 bits (400), Expect = 4.190e-46 Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 4 VGEQRAADRFSRETLDNLQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMFP 354 VG RA D+ L +++V+ DAEALPF+DNSF YTIAFGLRNVTD+D+ALREA RVLKPGGRFMCLEFS V + L YD YSF V+P +GQVVA++RDAYQYLVESIR FP Sbjct: 115 VGRNRAVDKG---ILGGIEWVRGDAEALPFEDNSFDAYTIAFGLRNVTDIDQALREARRVLKPGGRFMCLEFSHVVVPGLDAVYDVYSFQVLPRLGQVVARNRDAYQYLVESIRRFP 228
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A835Z8S3_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8S3_9STRA) HSP 1 Score: 157 bits (397), Expect = 3.580e-45 Identity = 81/118 (68.64%), Postives = 92/118 (77.97%), Query Frame = 1 Query: 1 QVGEQRAADRFSRETLDNLQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMFP 354 +VGE+RAA RFS L L+F ADAEALPF+D ++ YTIAFGLRNVTDV +AL EA RVL+ GGRFMCLEFS V LQ+ YD YSF+VIP IG VVA D+ AYQYLVESIRMFP Sbjct: 153 EVGEERAAKRFSGRALSALEFRVADAEALPFEDGAYDAYTIAFGLRNVTDVPRALAEARRVLRRGGRFMCLEFSHVNNPMLQRLYDAYSFSVIPKIGAVVANDKPAYQYLVESIRMFP 270
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A7S4I811_9STRA (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I811_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.800e-44 Identity = 81/125 (64.80%), Postives = 95/125 (76.00%), Query Frame = 1 Query: 4 VGEQRAADRFSRETLDN---------LQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMF 351 VGE+RA DR+ L + L+FVQ +A+ LPFDD SF +YTIAFGLRNVTDVD ALR+A RVLKPGGRF+CLEFS+VP L YD YSFNVIPAIG+VV +DR++YQYLVESIR F Sbjct: 182 VGERRARDRYGDSALLDGDGTHSAGALRFVQGNAQCLPFDDESFDIYTIAFGLRNVTDVDMALRDALRVLKPGGRFLCLEFSKVPNPVLSTLYDSYSFNVIPAIGEVVTQDRESYQYLVESIRKF 306
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A7S3LCZ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCZ2_9STRA) HSP 1 Score: 150 bits (380), Expect = 1.920e-44 Identity = 79/120 (65.83%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 4 VGEQRAADRFSRETLDN---LQFVQADAEAL-PFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMF 351 VGE+RA +RF LD L+FVQ +A+ L F+DN+F LYTIAFGLRNVTDVD+AL EA RVLKPGGRFMCLEFS+VP E ++ YD YSF +IP +G+VVA DR +YQYLVESIR F Sbjct: 16 VGERRARERFGSAILDESQGLKFVQGNAQDLHDFEDNTFDLYTIAFGLRNVTDVDRALSEARRVLKPGGRFMCLEFSQVPNEVFRQIYDTYSFQIIPWMGEVVANDRASYQYLVESIRKF 135
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A5A8EG61_CAFRO (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EG61_CAFRO) HSP 1 Score: 152 bits (385), Expect = 1.810e-43 Identity = 79/120 (65.83%), Postives = 90/120 (75.00%), Query Frame = 1 Query: 4 VGEQRAADR--FSRETLDNLQFVQADAEALPFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMFPG 357 VGEQRA + L + FV+ADAEALPF+ ++F YTIAFG+RNVT VD+AL EA RVL+PGGRFMCLEFSRV L AYD YSFNVIPA+GQ V DRD+YQYLVESIR FP Sbjct: 140 VGEQRARSKGLLDGRGLPAMSFVEADAEALPFESDTFDSYTIAFGIRNVTHVDRALAEAFRVLRPGGRFMCLEFSRVRNPVLAAAYDAYSFNVIPAVGQAVTGDRDSYQYLVESIRQFPN 259
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Match: A0A1Z5JRV9_FISSO (2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JRV9_FISSO) HSP 1 Score: 153 bits (387), Expect = 2.130e-43 Identity = 82/121 (67.77%), Postives = 94/121 (77.69%), Query Frame = 1 Query: 1 QVGEQRAADRFSRETLDN---LQFVQADAEAL-PFDDNSFHLYTIAFGLRNVTDVDKALREAHRVLKPGGRFMCLEFSRVPIEPLQKAYDWYSFNVIPAIGQVVAKDRDAYQYLVESIRMF 351 QVGE+RA +F LD+ LQF Q +A+ L F D SF LYTIAFGLRNVTDVDKAL EAHRVLKPGGRFMCLEFS+VP L++ YD YSFN IPA+G+ +A DR +YQYLVESIRMF Sbjct: 170 QVGERRARAKFGNSLLDDSQALQFQQGNAQDLCDFADCSFDLYTIAFGLRNVTDVDKALSEAHRVLKPGGRFMCLEFSQVPNPVLRQIYDAYSFNAIPAMGEFIANDRHSYQYLVESIRMF 290 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1311.2451.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1311.2451.1 >prot_L-elsbetiae_contig1311.2451.1 ID=prot_L-elsbetiae_contig1311.2451.1|Name=mRNA_L-elsbetiae_contig1311.2451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp QVGEQRAADRFSRETLDNLQFVQADAEALPFDDNSFHLYTIAFGLRNVTDback to top mRNA from alignment at L-elsbetiae_contig1311:23009..27167- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1311.2451.1 ID=mRNA_L-elsbetiae_contig1311.2451.1|Name=mRNA_L-elsbetiae_contig1311.2451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4159bp|location=Sequence derived from alignment at L-elsbetiae_contig1311:23009..27167- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1311:23009..27167- >mRNA_L-elsbetiae_contig1311.2451.1 ID=mRNA_L-elsbetiae_contig1311.2451.1|Name=mRNA_L-elsbetiae_contig1311.2451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=720bp|location=Sequence derived from alignment at L-elsbetiae_contig1311:23009..27167- (Laminarionema elsbetiae ELsaHSoW15)back to top |