mRNA_L-elsbetiae_contig1309.2439.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1309.2439.1
Unique NamemRNA_L-elsbetiae_contig1309.2439.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A6H5JNV9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNV9_9PHAE)

HSP 1 Score: 438 bits (1126), Expect = 1.410e-141
Identity = 227/265 (85.66%), Postives = 242/265 (91.32%), Query Frame = 1 
Query:    4 SLELVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMYPFM 798
            SL+LVPKAVLGL++LLLGNAFIVGINQIYD+DIDKA    INKPELPVASGE+S RLAW + L SLAAGPAIVYTSFS LIFRLY+LGLL+GGLYSVPPF+ KRFPV AGL IACVRGFLLNFGVY+AVREALGVAFRWNPVVLFLARFMVVFAGVIAV KDLPDV GD++Y ISTFASKRGVKFTARAASAVLA+NY+SAIAEGALSPAG FNRRVMVGGHS LL +LG A RKLVPDDQ SIK FY RIWDLFYLEYAMYPFM
Sbjct:  151 SLDLVPKAVLGLLSLLLGNAFIVGINQIYDIDIDKAN--HINKPELPVASGEISKRLAWALVLVSLAAGPAIVYTSFSPLIFRLYSLGLLVGGLYSVPPFTLKRFPVAAGLIIACVRGFLLNFGVYYAVREALGVAFRWNPVVLFLARFMVVFAGVIAVAKDLPDVKGDKEYKISTFASKRGVKFTARAASAVLAVNYLSAIAEGALSPAGTFNRRVMVGGHSALLAILGLAIRKLVPDDQGSIKRFYLRIWDLFYLEYAMYPFM 413
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A835YU62_9STRA (Tocopherol polyprenyltransferase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU62_9STRA)

HSP 1 Score: 325 bits (832), Expect = 1.140e-99
Identity = 169/264 (64.02%), Postives = 201/264 (76.14%), Query Frame = 1 
Query:    7 LELVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMYPFM 798
            L L+P+A++G++ALLLGNA+IVGINQIYDVD+D+     INKP LP+A+GEM  + AW V L S+  GP IV   FS +I  LY  GL+IGGLYSVPPF  KR P +AGLTIACVRGFLLNFGVY+AV+EALG+ F+WN  V+FLARFM VFAGVIAVTKDLPDV GD++YNISTFA + GV   A AA  VL LNYVSAI E AL PA  FN+ +M+ GHS   + L  A  KL PD + S+K FY RIWDLFYLEY +YPF+
Sbjct:   61 LRLIPRAIMGMLALLLGNAYIVGINQIYDVDVDR-----INKPFLPMAAGEMGKKAAWAVVLTSMICGPLIVSQLFSPVIMGLYCFGLVIGGLYSVPPFQTKRNPFLAGLTIACVRGFLLNFGVYYAVKEALGIPFKWNRAVIFLARFMTVFAGVIAVTKDLPDVEGDKQYNISTFAVRAGVARIANAACIVLGLNYVSAIVEAALVPA--FNKAIMIAGHSAFALYLYRARTKLQPDSKESVKAFYARIWDLFYLEYLLYPFI 317
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: W7TS50_9STRA (Tocopherol polyprenyltransferase-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS50_9STRA)

HSP 1 Score: 324 bits (831), Expect = 2.560e-98
Identity = 165/266 (62.03%), Postives = 207/266 (77.82%), Query Frame = 1 
Query:    1 NSLELVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMYPFM 798
            N L+ +P+A+LGL+ALL GN FIVGINQIYDV+IDK     +NKP LP+A+  M+ + AW V L + A G AI  + F+ LIF +YA G++ G LYSVPPF FKRFP++A  TIA VRGF LNFGVY+AVREALG+ F WNP+VLF+ RFM +FAGVIAV+KDLPD  GD+KYN+ TFA++ GVK  AR A+ VL LNY+SAIA+G ++P+GAF + VMVGGH+VL  +L   ++KL PD  ASIK FYK IWDLFYLEYA+YPF+
Sbjct:  142 NPLQPMPRAILGLLALLCGNVFIVGINQIYDVEIDK-----VNKPFLPLAAQRMTGKAAWAVVLAAGAGGLAITKSFFTPLIFNMYAAGIVAGTLYSVPPFYFKRFPLIAAATIAFVRGFSLNFGVYYAVREALGIPFAWNPIVLFITRFMTIFAGVIAVSKDLPDTEGDKKYNVRTFATRVGVKNMARGAAGVLFLNYLSAIAQGVVNPSGAFRQWVMVGGHTVLAALLIQRYKKLEPDSLASIKAFYKSIWDLFYLEYALYPFL 402
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A7S3XLT2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XLT2_HETAK)

HSP 1 Score: 315 bits (806), Expect = 5.680e-96
Identity = 162/265 (61.13%), Postives = 200/265 (75.47%), Query Frame = 1 
Query:    4 SLELVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMYPFM 798
            +L LVP+A LG+ ALL+GNA+IVGINQIYDVDIDK     +NKP LP+A+GE+  R AW V   S A G  IV   F  +I RLYA GLLIGGLYSVPPF FKR P++AGLTIACVRGFLLNFGVY+AV+EALG+ FRWNP V+FLARFM VFA VIA+TKDLPD+AGD+KY +STFA++ GV+  A+ +S VL  NYVSA+   A +PA  F + VMV  H++    L  ++++L  +  ASIK FY RIWDLFY +Y +YPF+
Sbjct:   52 ALSLVPRAALGMAALLMGNAYIVGINQIYDVDIDK-----VNKPFLPIAAGELGKRTAWAVVAGSAALGTFIVSRCFGPVILRLYAFGLLIGGLYSVPPFQFKRNPLLAGLTIACVRGFLLNFGVYYAVKEALGIPFRWNPTVIFLARFMTVFAMVIAITKDLPDIAGDKKYGVSTFATRLGVRKVAKYSSLVLGANYVSAVLNAAFAPAHHFRKPVMVVAHTLFAGYLFKSYKELDAESTASIKQFYGRIWDLFYAQYCIYPFI 311
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A6U3TIV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3TIV9_9STRA)

HSP 1 Score: 312 bits (800), Expect = 5.840e-94
Identity = 159/262 (60.69%), Postives = 191/262 (72.90%), Query Frame = 1 
Query:   13 LVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMYPFM 798
            L+P AV G++ALL GNAFIVGINQIYDVDIDK     +NKP LPVA+GE+STR AW + + S   GP IVY  FS +IF LY  G  +GGLYSVPPF  KRFPV AGL+IA  RGFLLNFGVY+A REALG++F WNP V FLARFM V+AGVIAVTKDLPD+ GD+K+ I T +++ GV   A+ A+ +L  NY  A+A   L+P G F+R  M G H +   VL  + RKL P+   SIK FYKRIWDLFYLEY +YPF+
Sbjct:  136 LLPNAVAGMLALLFGNAFIVGINQIYDVDIDK-----VNKPFLPVAAGELSTRAAWALVITSAVCGPLIVYHLFSKVIFGLYMFGTTVGGLYSVPPFRLKRFPVAAGLSIAICRGFLLNFGVYYAAREALGLSFVWNPAVAFLARFMTVYAGVIAVTKDLPDIEGDKKFEIETLSTRYGVSLIAKVATGLLLANYAGAVATALLAPPGTFHRAFMAGSHILAGTVLAVSARKLDPNSMDSIKAFYKRIWDLFYLEYCLYPFI 392
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A7S2UTD4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTD4_9STRA)

HSP 1 Score: 304 bits (778), Expect = 7.560e-91
Identity = 156/265 (58.87%), Postives = 195/265 (73.58%), Query Frame = 1 
Query:    4 SLELVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMYPFM 798
            SL LVP+AVLGLVALL+GNA+IVGINQI+DVD+DK     +NKP LP+A+GE++ + AW +       GP I   +F  LI  LY  GL+IG LYSVPPF  KRFP++AGLTIACVRGFLLNFGVY+AV++AL + F+WN  V+FLARFM VFAGVIA+TKDLPDV GDRKYNI+T   ++GV   A+ A+ VL  NY+SAI  G ++PA  FN+ VMV GH++  V L   ++ L      S+K FYK IWDLFY EY +YPF+
Sbjct:  128 SLNLVPRAVLGLVALLMGNAYIVGINQIFDVDVDK-----VNKPFLPIAAGELTKKQAWMLVAGCGLLGPLIAALNFGGLILGLYLFGLVIGTLYSVPPFQTKRFPIIAGLTIACVRGFLLNFGVYYAVKQALNIPFQWNASVIFLARFMTVFAGVIAITKDLPDVEGDRKYNINTLTVRKGVPAVAKLATGVLLANYISAIVNGIVAPAQQFNKVVMVSGHALFSVWLIKLYKDLNASSTTSVKKFYKGIWDLFYAEYCLYPFI 387
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A7R9UKU9_DIALT (Hypothetical protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9UKU9_DIALT)

HSP 1 Score: 294 bits (753), Expect = 1.690e-88
Identity = 158/265 (59.62%), Postives = 190/265 (71.70%), Query Frame = 1 
Query:    4 SLELVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMYPFM 798
            SL+LVP+A+ GL+ALLLGNAFIVGINQIYDV++DK     INKP LP+A+GE+S ++AW + L SL  G   V   FS LIF LYALGL IGGLYS+PP   KRFP+ AGL I+ VRGFLLNFGVY+AVREA+GV FRWNPVV F+A FM VFA VIAVTKDLPDV GD  Y + TFA++ GV+  AR A + L   Y +A     L+PAG F R  M  GH+ L V L   +R+L      SIK FY  IW +FYL+YA+YPF+
Sbjct:   38 SLQLVPQALRGLLALLLGNAFIVGINQIYDVEVDK-----INKPFLPIAAGEISPQVAWALVLGSLCGGLLTVRLCFSQLIFGLYALGLSIGGLYSLPPIQLKRFPIAAGLVISTVRGFLLNFGVYYAVREAIGVPFRWNPVVCFIATFMTVFASVIAVTKDLPDVVGDAAYKVKTFATRYGVRAVARGACSALGGAYAAATLLALLAPAGVFRRLPMAVGHAALGVKLLATYRRLDATSLGSIKRFYGGIWQIFYLQYALYPFI 297
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A7S2HIJ7_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HIJ7_9STRA)

HSP 1 Score: 292 bits (747), Expect = 4.420e-88
Identity = 152/259 (58.69%), Postives = 189/259 (72.97%), Query Frame = 1 
Query:   13 LVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMY 789
            L+P+A +G+V+LLLGNAFIVGINQIYD  IDK     +NKP LPVASGEMS R AW V + S  AGP IV+  F AL+F+LY  G+ +G +YS+PP   K+ P++AGLTIA VRGFLLNFGVY+AV++A+G  F W+P V F+ARFM  FA VIAVTKDLPD+ GD+ YNI TFA+K GV   A  A+++L LNY+ AI  G LS AG +    M+GGH+ L  VL   F++L PD   S+K FYK IWDLFYLEY +Y
Sbjct:   10 LLPRAFIGMVSLLLGNAFIVGINQIYDEGIDK-----LNKPFLPVASGEMSKRFAWTVVIGSALAGPVIVHKFFPALLFKLYMCGMGLGAIYSIPPIRTKQNPILAGLTIATVRGFLLNFGVYYAVKDAIGAPFGWSPKVSFIARFMTAFATVIAVTKDLPDIDGDKAYNIETFATKLGVAKIAAGATSLLFLNYIHAILTGILSKAGTYKTIPMLGGHAALACVLIARFKQLKPDSMESVKKFYKHIWDLFYLEYGLY 263
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: A0A7S2L4H9_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L4H9_9STRA)

HSP 1 Score: 295 bits (754), Expect = 1.200e-87
Identity = 157/259 (60.62%), Postives = 188/259 (72.59%), Query Frame = 1 
Query:   13 LVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMY 789
            L+P+A +G++ALLLGNAFIVGINQI+D DID      +NKP LPVASGEMS R+AW   LFS   GPAIVY  F  ++F+LY LG  +G +YSVPP   KR P+ AGLTIA VRGFLLNFGVY+AV++A+G  F W+P V F+ARFM  FA VIAVTKDLPD+ GD+ YNIST A+K GV   A  A+  L LNY+ AI  G LS AG FN   MVGGH+ L V+L   F+ L P+  ASIK +YK IWDLFYLEY +Y
Sbjct:  112 LLPRAFIGMIALLLGNAFIVGINQIFDKDIDV-----LNKPFLPVASGEMSERVAWFAVLFSGIVGPAIVYNFFPMMLFKLYMLGWTLGMVYSVPPLRTKRNPLAAGLTIATVRGFLLNFGVYYAVKDAIGAPFGWSPKVSFIARFMTAFATVIAVTKDLPDIEGDKAYNISTLATKLGVSKIANGATVCLLLNYIHAILTGVLSKAGTFNVIPMVGGHAALAVMLLTRFKALEPEKLASIKTYYKHIWDLFYLEYFLY 365
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BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Match: B8CAB5_THAPS (Tocopherol polyprenyltransferase-like protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAB5_THAPS)

HSP 1 Score: 291 bits (745), Expect = 2.410e-87
Identity = 152/259 (58.69%), Postives = 188/259 (72.59%), Query Frame = 1 
Query:   13 LVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVASGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPPFSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARFMVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYVSAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYKRIWDLFYLEYAMY 789
            ++P+AV+G+VALLLGNA+IVGINQI+D +ID      +NKP LPVASGEMS  +AWGV  FS   GP IVY  F  L+F+LY LG  +GG+YS+PP   KR P+ AGLTIA VRGFLLNFGVY+AV++A+G  F W+P V F+ARFM  FA VIAVTKDLPD+ GD+ YNISTFA+K GV   A+ A+  L LNY+ AI  G LS AG F    M+GGH+ L  +L   F++L P+   SIK +YK IWDLFY EY +Y
Sbjct:   41 MLPRAVIGMVALLLGNAYIVGINQIFDREIDV-----LNKPFLPVASGEMSKGIAWGVVGFSGIVGPLIVYKFFPILLFKLYMLGWTLGGIYSIPPIRTKRNPLAAGLTIASVRGFLLNFGVYYAVKDAIGAPFVWSPKVSFIARFMTAFATVIAVTKDLPDIEGDKAYNISTFATKIGVPKIAKGATLCLFLNYIHAILTGVLSKAGTFRALPMIGGHAALAALLLTRFKELDPESMPSIKKYYKHIWDLFYAEYVLY 294
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1309.2439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNV9_9PHAE1.410e-14185.66Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YU62_9STRA1.140e-9964.02Tocopherol polyprenyltransferase-like protein n=1 ... [more]
W7TS50_9STRA2.560e-9862.03Tocopherol polyprenyltransferase-like protein n=2 ... [more]
A0A7S3XLT2_HETAK5.680e-9661.13Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6U3TIV9_9STRA5.840e-9460.69Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2UTD4_9STRA7.560e-9158.87Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9UKU9_DIALT1.690e-8859.62Hypothetical protein n=1 Tax=Diacronema lutheri Ta... [more]
A0A7S2HIJ7_9STRA4.420e-8858.69Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2L4H9_9STRA1.200e-8760.62Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
B8CAB5_THAPS2.410e-8758.69Tocopherol polyprenyltransferase-like protein (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1309contigL-elsbetiae_contig1309:20637..26217 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score291.2
Seed ortholog evalue4.9e-76
Seed eggNOG ortholog35128.Thaps263902
Preferred nameVTE2-2
KEGG rclassRC01840
KEGG koko:K12501
KEGG ReactionR08782
KEGG Pathwayko00130,map00130
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.UbiA prenyltransferase family
EggNOG OGs2QUHT@2759,2XCN7@2836,COG0382@1
EC2.5.1.117
COG Functional cat.H
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01006
Ec32 ortholog descriptiontransferase
Ec32 orthologEc-17_001240.1
Exons4
Model size2941
Cds size801
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1309.2439.1prot_L-elsbetiae_contig1309.2439.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1309 22777..26217 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815490.539594-UTR-L-elsbetiae_contig1309:20636..227761622815490.539594-UTR-L-elsbetiae_contig1309:20636..22776Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1309 20637..22776 -
1691682923.8332305-UTR-L-elsbetiae_contig1309:20636..227761691682923.8332305-UTR-L-elsbetiae_contig1309:20636..22776Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1309 20637..22776 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815490.5533426-CDS-L-elsbetiae_contig1309:22776..229461622815490.5533426-CDS-L-elsbetiae_contig1309:22776..22946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 22777..22946 -
1691682923.8449707-CDS-L-elsbetiae_contig1309:22776..229461691682923.8449707-CDS-L-elsbetiae_contig1309:22776..22946Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 22777..22946 -
1622815490.5701709-CDS-L-elsbetiae_contig1309:24171..243161622815490.5701709-CDS-L-elsbetiae_contig1309:24171..24316Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 24172..24316 -
1691682923.854054-CDS-L-elsbetiae_contig1309:24171..243161691682923.854054-CDS-L-elsbetiae_contig1309:24171..24316Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 24172..24316 -
1622815490.5828624-CDS-L-elsbetiae_contig1309:24920..252831622815490.5828624-CDS-L-elsbetiae_contig1309:24920..25283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 24921..25283 -
1691682923.8626146-CDS-L-elsbetiae_contig1309:24920..252831691682923.8626146-CDS-L-elsbetiae_contig1309:24920..25283Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 24921..25283 -
1622815490.5982232-CDS-L-elsbetiae_contig1309:26094..262171622815490.5982232-CDS-L-elsbetiae_contig1309:26094..26217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 26095..26217 -
1691682923.875824-CDS-L-elsbetiae_contig1309:26094..262171691682923.875824-CDS-L-elsbetiae_contig1309:26094..26217Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1309 26095..26217 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1309.2439.1

>prot_L-elsbetiae_contig1309.2439.1 ID=prot_L-elsbetiae_contig1309.2439.1|Name=mRNA_L-elsbetiae_contig1309.2439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=267bp
NSLELVPKAVLGLVALLLGNAFIVGINQIYDVDIDKARPRKINKPELPVA
SGEMSTRLAWGVSLFSLAAGPAIVYTSFSALIFRLYALGLLIGGLYSVPP
FSFKRFPVVAGLTIACVRGFLLNFGVYHAVREALGVAFRWNPVVLFLARF
MVVFAGVIAVTKDLPDVAGDRKYNISTFASKRGVKFTARAASAVLALNYV
SAIAEGALSPAGAFNRRVMVGGHSVLLVVLGFAFRKLVPDDQASIKGFYK
RIWDLFYLEYAMYPFM*
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mRNA from alignment at L-elsbetiae_contig1309:20637..26217-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1309.2439.1 ID=mRNA_L-elsbetiae_contig1309.2439.1|Name=mRNA_L-elsbetiae_contig1309.2439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5581bp|location=Sequence derived from alignment at L-elsbetiae_contig1309:20637..26217- (Laminarionema elsbetiae ELsaHSoW15)
AACAGCCTGGAGCTAGTCCCGAAGGCCGTGCTTGGCCTGGTGGCGCTCCT
GCTCGGAAACGCCTTCATCGTGGGCATCAACCAGATCTACGACGTGGACA
TCGACAAGGCAAGGCCCCGCAAAGTAGAACGGCCCTGAACCGAACCATCC
GGCGGGACCCCGCAGAGTAAACGACCCTTAATCACCCTTGCTTCTTCCGC
CCCACCTCCTTGCCGGCGAACCAGCTTGCGAGCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGTTGCTTCGTGTGGTTTGTTCCTCGTGTTTGCCACGGGG
ACGACGTCGTGTTTTTTGCAATCGAGGAAGAGGGGCGAGACGCGTTCGAA
CATTATCCCCTTTTCATTTTCGCGGTCGCCTTTTTTTTTTCTTCTTTTTC
TTTTTTTTCTATTCCCACCCATTATTGGCTTATTCGTCGTCTGCCCCACT
GGCCCCCTCCCCCCATTACGACTAGCTAGACGAACCCAACGTGGGTCACA
CAGCGTGTGTTGTCGTCCCATTCATTCGGGCGCCTGTGCCCACGTCGTGC
TTTGGGGGAAAAGGAACTCTAACAGTATAGTGCTGTCACGAGCAACGACT
TTAGACTGTGCTTTCTGGTTTTTGTCAGACAAAATCCGCCGAAAAAACGA
AGTAAATAAATCGCCCAATTTCTCGACTAAACGCACGCGCGCGCACGCAC
ACACCGGCTCCTTCGCGTCGACCGAAATCGAAATCGACGTGGAGAGCACG
TAAAAATAAATGAAAAGCAACAAGCTTCCTTCTCATGCACACCCCTACCC
AACATGCACCAGATCAACACGGCGTTTTTTATTTTGTTATTCCGTCACCC
CCTCTTATCGCCCCCGCCGCGCGCGCCACTAATCCACCACCCCTGCCTTA
AAAAAAAAAAAAAAAAAAAAACGTTTCTAACCAGATCAACAAGCCGGAGC
TTCCGGTGGCCTCGGGGGAGATGAGCACGCGCTTGGCGTGGGGGGTGTCC
CTGTTCAGCCTCGCAGCGGGCCCCGCGATCGTGTACACCTCCTTCAGCGC
GCTCATCTTCCGGCTCTACGCCCTCGGACTGCTCATCGGCGGCCTGTACT
CGGTGCCGCCCTTCTCGTTCAAGCGCTTCCCGGTGGTGGCCGGGCTCACC
ATCGCCTGCGTGCGCGGGTTCCTGCTGAACTTCGGCGTGTACCACGCGGT
GCGGGAGGCCCTCGGCGTGGCCTTCCGGTGGAACCCCGTCGTGCTCTTCC
TGGCGAGGTTCATGGTGGTCTTCGCCGGGGTCATCGCCGTCACCAAGGTG
TGCGGTTGTAGGTCGCGGTTGTAGTTGCGGTTGCGGTTGTGGCTGTGTTG
TTGTTGCGGTGCGGTGCGGTGCGGTGTGATGCTTCTTAGCGCGTCGGTTA
GGTGCATCCGGGGTAGAGGTGGAGGTTGGTTTGGCGAGAGGCTCAACGCC
GTCACCAAGGCATGCGGTTGTGGTTGCGGTTCTGGTTGTAACATGCGGTT
TCGGCGCGGTTGCAGCTGCGGTGCTCAACAGGTGGACAGGGAGAAGAACA
CAAGATGTGCGTTGTTCATTATTCGCAGACGATTGGCAAACGTTGCCAGT
TTCTTGTGGTATGTCTCGACAGGAGGGAAGTAGGGACGGTGCCCCGTGAA
TGTTTCGAAGGAGTCCCGTGGATGCGTGACCAGGAATCAGTAGTCCAACG
ACTATGTACATATGTGTGGCCAGGAGGAAAGGAATACAGATGGCCGAGTG
GCTGCAATAAAGCATGACATGAGCACCAATGGTAAGAAAATGACCAAGGC
AGCAAGCGCATAAACCCGCCCCTCTCCCTCGTTGCACGGGGCGATAGTGC
CGAAATCCAAAATGAAATGAATTCAACCTCTTTTTTTTTTGTCTTCTTCA
GGATCTGCCGGATGTCGCAGGCGACAGGAAGTACAACATCTCCACCTTCG
CCTCCAAGAGAGGCGTCAAGTTTACGGCGCGCGCGGCGTCTGCCGTCCTC
GCCCTGAACTACGTTTCTGCGATCGCGGAAGGCGCCCTCTCCCCAGGTAA
GAGAGAGCAGCACCGGCGTGTACGTCCGTACGTCCAAACATAGATTGCCG
TGGGAACGAAGACAGCGGCGCCAGTAACCCGAGCTGAATTTCCCCGTGTG
GACTACTCCATTTCATTATTAAGCGGGGGGACTTTTAATTTGTCAGGGCC
AATGATGATTGCCCCCGCAAGACCTGCTCCCGATACATCTTAGCTTCCGG
GGAGTTCGAAGTTCGAAATAGGAACAGTGGTGCCCCCGATGCCTTCGTTC
GTGGGGGGGGGGGTTCGAGGTAGAGACACCGTTCTAGGTGGGGGCCCGGT
TTGTGATTGAGTTCACAAAAGCCCTTCCTTCTTGGACAGGGGCGAAAAGC
GCGCGGCGGACGGGTAAGTGTTTTGTTTCGGTGTTTTTTTTACTTGAGTA
GTATACGTCTTGGGGGGCCGAAGTACGTGGAACCGCCGCGGTTGGTTCTC
CAATTGGTTCTACACGCGAACCATGTTTTTTTTTTCTTGGACCCCGAGAG
ACCGAGAGACCAAGAGAGCGCAGCTGTGCGCGCGCGTGTGTGTGTGGGCG
TGTGCGCTTTAACCGTTCTGCTTTGTTGCTTGCAACTTCCACCACTGCGT
CGGGTACACAAGGCGCGACATAACTTTCACGGCGGGACTGGGATGTTTTT
CTTCCTCGTAAACGGCTTTTTGCCGTACACATGTCATACAAAACACGTGT
GCACCCGGCACTTTGGTTGGCAGAATCTATTTCAAATACTACAAGCAGGG
GGGGTTATCACTGTGCTTGTGCCTAGGATAGACACAGAACACAGAAAACA
ACACGCCTCTCTGTATTTATTACCCCAATTTGTTTTTTGGATCCTCCTTG
TCTGAGTTCGGTTAATACCTCGGTATCCAAACGAATAAAATAAAATAAAA
ATATTATACTCGGAAGTACATATCTAGGCTTCCTGCAATAGAGCTAGCCC
CCAATTCTCAAAAAGAGCTGTGGGGGATTTTTCACTCTGTATCCTAGATA
AACACCCGCCCCCCCGCGCGCTGTGCCCCCACAGCTCTTTTTGAGAAATG
GGGGCGGGCTCTATTGCAGGAAGCCTACATGACAAGAATTTTCTACGCCG
AGTCAGTCTTGCCAACGAACCTTCTCCTCTCTCTTGGGCCGGCCGGCCGT
CCTGTCGCCCGTTGCCGTGTCCACCACGCCTTGCCACGGCTCGGTCTGGC
CTTTTTGCTTTTCCACCACAGCGGGCGCGTTTAACAGGCGAGTGATGGTC
GGGGGCCACTCGGTGCTGCTGGTGGTGCTCGGATTCGCCTTCCGAAAACT
CGTGCCGGACGACCAGGCCAGCATAAAGGGGTTCTACAAGCGCATCTGGG
ACCTCTTCTACCTCGAGTACGCCATGTATCCCTTCATGTAACAAGAGAGG
GGGAGACGTGGCTCGTTTCTCTCCTTCCCGTAGGTATGCGCTCGGTTTCT
GAGATCTAAATACGTGCGGCGGCGGCGGCGGCGGCGTTTGTAGGCGCAAG
GCACGCCTGGGACTGACTGCCTCTCGTTGTTCCCCTTTGTCGATGTTCGG
CGTGCGTACTTATTGTATAACTGCTGTGTAGAACCTTTGTGTGTTCGACA
GGTGTTATTATAAGCAGTAAGTGTTGGAGGAGTACGGACTTATGGGAGTG
TACTGGGTAGAGGGATCGGAACGGTTTTTGATGCGAAGGTAATACAACAA
ACAGCACACAGCATCACACACGCACACACGACGATGTCTTGTGTTTTATT
GATGCCGCTCGCCTGCAAGCACGTACGTCCCAGGTCTTCGTCTCACCTAT
GTGGGACAGGCAGGCAGTGCACGCACTCCATGTGTTGCAGTGGATTGCTC
TCTTGTGGTGGTCAGCAGCGCTTATTGGGTGTGTGGGTCGGCCGTAGGCC
TTACGCCGTCTTGCGTGTGGCGCTTAAGACAGTGCCGCGGCCGGGGGTAG
CTGCTACCATTTTTGTTGTGCGACCTACACACGAAAACTAGGTTTTGGCC
CGAATTGTATGCTCTTCTGGTCGGCTGTCGGTGCGTGCAGTGTGCACAGC
AGCGCAGTGCGAGACATGTCGCGCCGGCGGTTTTCGGTGTGTAGGTAGGT
GCATTGGGGCCCGTTCGGCATCGCGTACTCGATACCCTCTTTTTTCAACG
GAGAGGGCGAGATTAATGATCCTTGCCCCTGGGTTTCCTGCGAATGCATC
GAAATGCCCATACATACAAATCACAACAAAAAAACAGGCAACTAGGCAGG
TGCAGGTGGGCATGCATGTAGATCAAGCTGTGTGTACCATATGCTGCTCA
AGATTGAAGAGTTTAGGCGCCGCTGTGTGGTTCTGAGCTGTCGTTTTCCG
CCGACTCTTGTGTGTTTTGTCGAAAAATCAGGGAGGCAGACGCGTGTGTA
GTGTGAGGTTTTTTATGCTGGGAGACTTGAGTCCAAAATGCCCCACTACA
TATAGGTGAATTGAACAGGTGCATACCTTCTGTGGGACCACGGTTCAGTA
CTCTGGCAGGGATGCCCTCGTAGCAGGGAGCCCGTCGAGCACTGGAGATG
AACGTGAAGAAGAAAAAGAAAAGACAAAACAAAAAACATACATTCCCACT
TGATCGTTTTACGTGGGGGTTTGGCACGTCAGAAGCAGTCGCCATACGGC
CTTCGTTGTTGTGTCTCTGGTGGCTTTTCCTCCCTCTGCGTGTCTATCTC
TGCGGGGCGGGCGTGGATGCGTGTGTGGGATTTTTGCAGGCGGCCTGAGG
GACTATCCTGGTGCTTCTACTCTGCGCACCTCATCGGGGACATTGTGTTG
GTGTTTTGGCTCGAAAGCTGGGGGGGCCGGGCAGGGCGTATTTTTGGTGG
TGGCTCGCGTCCCATTGGCGGTGGAGATATGCAGCGGTTGCGCGGGTGTT
CCGGCTGCTTTGTTTTGTGTTTTCGGTGTGTGGTGTTGGCTCACCTGGTT
GGCGCATCTGTTCGACGGGGCAAGAAGGTTTTAGGGGATCTGTGCCACAA
GCAGTCGCAAATATTTTGCCCACTCGTCCCTACGGAGAGCACCAAGTATG
TATGTAGAGAGGACAGCAGGTGGGTGCGATAAGGCTTGGGCTGGTCGTTG
ATAGAGCTTGGGCTAGTCGTTGATATTTAGAGCTTGGGCTGGGCGTTGGT
GGAGTTTGGGCTAGTCGTTGATGAAGCTTGGGCTAGTCGTTGATGAAGCT
TGGGCTAGTCGTTGGTAGAGCTTGGGCTAGTCGTTGATGAAGATTGGGCT
GGTCGTTACTGGCCGGTGTGTGTGTGCCTGCCGAAGCACCGGGCGCTCAT
AGGTTGAGCGGAGCGGAATACGCGGTCGGTAGTTGGGGATAGAGAAATAT
CACCCACCTACATACCGCTTTGAAGGCCTGAATCACGTGCTTTTGTGCCC
GTGTACGGAGGAGAGACTTGTGTGGGATGTTGGGTACTGATGCTGAGGAG
ATAACAGGGCCGAAGATGCGGCGCGATTGGAAGACGTAATACATAGATGG
GGTTAGAATAATTATCTCTTGTCAACAGCGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1309:20637..26217-

>mRNA_L-elsbetiae_contig1309.2439.1 ID=mRNA_L-elsbetiae_contig1309.2439.1|Name=mRNA_L-elsbetiae_contig1309.2439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1602bp|location=Sequence derived from alignment at L-elsbetiae_contig1309:20637..26217- (Laminarionema elsbetiae ELsaHSoW15)
AACAGCCTGGAGCTAGTCCCGAAGGCCGTGCTTGGCCTGGTGGCGCTCCT
GCTCGGAAACGCCTTCATCGTGGGCATCAACCAGATCTACGACGTGGACA
TCGACAAGGCAAGGCCCCGCAAAAACAGCCTGGAGCTAGTCCCGAAGGCC
GTGCTTGGCCTGGTGGCGCTCCTGCTCGGAAACGCCTTCATCGTGGGCAT
CAACCAGATCTACGACGTGGACATCGACAAGGCAAGGCCCCGCAAAATCA
ACAAGCCGGAGCTTCCGGTGGCCTCGGGGGAGATGAGCACGCGCTTGGCG
TGGGGGGTGTCCCTGTTCAGCCTCGCAGCGGGCCCCGCGATCGTGTACAC
CTCCTTCAGCGCGCTCATCTTCCGGCTCTACGCCCTCGGACTGCTCATCG
GCGGCCTGTACTCGGTGCCGCCCTTCTCGTTCAAGCGCTTCCCGGTGGTG
GCCGGGCTCACCATCGCCTGCGTGCGCGGGTTCCTGCTGAACTTCGGCGT
GTACCACGCGGTGCGGGAGGCCCTCGGCGTGGCCTTCCGGTGGAACCCCG
TCGTGCTCTTCCTGGCGAGGTTCATGGTGGTCTTCGCCGGGGTCATCGCC
GTCACCAAGATCAACAAGCCGGAGCTTCCGGTGGCCTCGGGGGAGATGAG
CACGCGCTTGGCGTGGGGGGTGTCCCTGTTCAGCCTCGCAGCGGGCCCCG
CGATCGTGTACACCTCCTTCAGCGCGCTCATCTTCCGGCTCTACGCCCTC
GGACTGCTCATCGGCGGCCTGTACTCGGTGCCGCCCTTCTCGTTCAAGCG
CTTCCCGGTGGTGGCCGGGCTCACCATCGCCTGCGTGCGCGGGTTCCTGC
TGAACTTCGGCGTGTACCACGCGGTGCGGGAGGCCCTCGGCGTGGCCTTC
CGGTGGAACCCCGTCGTGCTCTTCCTGGCGAGGTTCATGGTGGTCTTCGC
CGGGGTCATCGCCGTCACCAAGGATCTGCCGGATGTCGCAGGCGACAGGA
AGTACAACATCTCCACCTTCGCCTCCAAGAGAGGCGTCAAGTTTACGGCG
CGCGCGGCGTCTGCCGTCCTCGCCCTGAACTACGTTTCTGCGATCGCGGA
AGGCGCCCTCTCCCCAGGATCTGCCGGATGTCGCAGGCGACAGGAAGTAC
AACATCTCCACCTTCGCCTCCAAGAGAGGCGTCAAGTTTACGGCGCGCGC
GGCGTCTGCCGTCCTCGCCCTGAACTACGTTTCTGCGATCGCGGAAGGCG
CCCTCTCCCCAGCGGGCGCGTTTAACAGGCGAGTGATGGTCGGGGGCCAC
TCGGTGCTGCTGGTGGTGCTCGGATTCGCCTTCCGAAAACTCGTGCCGGA
CGACCAGGCCAGCATAAAGGGGTTCTACAAGCGCATCTGGGACCTCTTCT
ACCTCGAGTACGCCATGTATCCCTTCATGTAACGGGCGCGTTTAACAGGC
GAGTGATGGTCGGGGGCCACTCGGTGCTGCTGGTGGTGCTCGGATTCGCC
TTCCGAAAACTCGTGCCGGACGACCAGGCCAGCATAAAGGGGTTCTACAA
GCGCATCTGGGACCTCTTCTACCTCGAGTACGCCATGTATCCCTTCATGT
AA
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