mRNA_L-elsbetiae_contig1309.2437.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: D7FLG5_ECTSI (FZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG5_ECTSI) HSP 1 Score: 471 bits (1211), Expect = 1.580e-165 Identity = 223/288 (77.43%), Postives = 248/288 (86.11%), Query Frame = 1 Query: 1 TRKGSGIRSIAWVVVPIAAILTGGKSVHGCYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAEEPETDSNGDPVYLRDYFPGQPFRDVEWASGRQPKIVCTPSIKGAAAPSLQPWGRRFH----SKVAARAGIRIRFGVVPVVGAIAGLLLA 852 TR GS +RS WVV A ++ G S GCYI+G+DIGYCE SLY+DSEFRLAATPFCSS+IKYS CVPKYDPLP SR+FPDGRW NNT+GIKDAW+EQ+YN +VN RL++E DKDLQKQGIDEYGN G+PVPRFTD++DC AFKAY+CYINFPRCDDD NSLVTCRSACENLMVACQNQ+D+WRCGESQYFNGYEAEEPETDS+G+PVYLRD+FPGQPFRDVEWA GRQP+IVCTPSIKGAAAPSLQPWGRR K AAR G FGVVPVV A+ GLLLA Sbjct: 28 TRCGS-MRSGLWVVG--AVLIAGCASSEGCYIHGADIGYCETSLYDDSEFRLAATPFCSSYIKYSTCVPKYDPLPASREFPDGRWVNNTLGIKDAWIEQYYNSIVNNRLEVEADKDLQKQGIDEYGNPGSPVPRFTDNRDCQSAFKAYMCYINFPRCDDDENSLVTCRSACENLMVACQNQRDMWRCGESQYFNGYEAEEPETDSDGNPVYLRDFFPGQPFRDVEWAGGRQPEIVCTPSIKGAAAPSLQPWGRRRRRYNDDKTAARTG----FGVVPVVAAVTGLLLA 308
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: A0A835ZE42_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE42_9STRA) HSP 1 Score: 263 bits (671), Expect = 4.020e-84 Identity = 121/237 (51.05%), Postives = 159/237 (67.09%), Query Frame = 1 Query: 52 AAILTGGKSVHGCYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRC-DDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAEEPETDSNGDPVYLRDYFPGQPF--RDVEWASGRQPKIVCTPSIKGAAAPSLQPW 753 A + T +VHGC + G DIG C + D +RL PFC +++Y+AC+PK PLPPSRD P GRW+N+T+ KD WV ++Y +V +R+ IE DK LQK G DE+G +GAPVPRF+++ DC AF+ Y C+ NFPRC ++ G +L+TC SACEN+M+AC+ KDLWRCG S+Y NGY E P T +G YLRD++PGQPF E + P VCTPS+ GAAA PW Sbjct: 22 AVVFTWTATVHGCRLQGLDIGQCNTDVANDELYRLQLMPFCGPYVRYTACLPKQAPLPPSRDHPQGRWWNHTVAHKDDWVREYYERIVGERVAIEKDKSLQKAGRDEFGARGAPVPRFSNNPDCRDAFRNYACWTNFPRCIEETGETLMTCHSACENMMIACRIPKDLWRCGPSEYLNGYSPEAP-TLLSGVVTYLRDFYPGQPFAANAFEQTRRQDPLPVCTPSLDGAAAALRAPW 257
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: A0A7S3UZ54_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ54_HETAK) HSP 1 Score: 245 bits (625), Expect = 3.760e-77 Identity = 124/269 (46.10%), Postives = 159/269 (59.11%), Query Frame = 1 Query: 4 RKGSGIRSIAWVVVPIAAILTGGKSVHGCYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEG-DKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFN---------------GYEAEEPETDSNGDPVYLRDYFPGQPFRDVEWASGRQPKIVCTPSIKGAAAPSLQPWGRR 762 R+ SG+ I +V A V GCYI G+D G C+ LY+D + R A PFC ++ Y CVP+ L PSRD+P GRW+N T+ KD W+E+ YN ++ RL E D K+G DE+GNKG RFT + DC A+ AY C+INFPRCD+ SL+TCRSACENLM AC KD+WRCG+S+YFN + E E ++ G P+Y RDYFPGQPFRD E S P +CTP+I+ A A + WG R Sbjct: 14 RRTSGLLCIVALVFKTLA------RVDGCYIQGTDSGICDSDLYDDIDVREANMPFCYKYVDYIPCVPQEKTLDPSRDYPSGRWYNYTVLTKDNWIEKQYNSILKWRLYEESSDPPRVKKGYDEWGNKGTTTVRFTKNDDCQAAYAAYFCWINFPRCDEQDESLMTCRSACENLMQACGYVKDMWRCGKSEYFNYGGSFNLDESHPEKAASQTAEEEEETGGLPIYYRDYFPGQPFRDYEAKSDGTPIPICTPAIRDAGA---RAWGGR 273
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: A0A7S3GVU4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVU4_9STRA) HSP 1 Score: 204 bits (519), Expect = 4.060e-61 Identity = 105/224 (46.88%), Postives = 146/224 (65.18%), Query Frame = 1 Query: 88 CYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYD-PLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGN-SLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAEEPETDSNGDPVYLRDYFPGQPFRDVEWA-SGRQPKIVCTPSIKGAAAPSLQP 750 CYI G+D G C S +R P+C + Y ACVPK D LP SR+FP GRW N+T+ +KD +VE+ + +R+ IE ++ L+K G++EYG+KG RF DC AF+ Y+C+INFPRCD + S+ TCRSACEN ++C ++ LWRCG+S+YFNGYE E+P + G+ YLR+YFPGQPFR+ +++ G +CTP+I GAA+ S P Sbjct: 39 CYIAGTDSGECSTST-AVLAWRQDNMPYCQFSVLYPACVPKEDLELPASREFPMGRW-NSTILMKDKYVERMTETLFIERIAIERNRTLRKAGVNEYGDKGRVRRRFYKKPDCRNAFRNYMCWINFPRCDVARDLSMPTCRSACENFFISCGYERGLWRCGKSKYFNGYEPEKPIISALGNVSYLREYFPGQPFRENKYSPKGNSELQICTPAIDGAASRSHFP 260
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: A0A6G0W900_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W900_9STRA) HSP 1 Score: 202 bits (513), Expect = 3.990e-60 Identity = 101/214 (47.20%), Postives = 131/214 (61.21%), Query Frame = 1 Query: 85 GCYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAEEPET-DSNGDPVYLRDYFPGQPFRDVEWASGR-QPKIVCTPSI 720 GC I+GSD G C E +EF L PFC + Y+ CVP+ L W+N+++ KD ++ Q YN +V QR E D L QG+DE+GNKG VPR+T++KDC A K Y+C++NFPRCD+ G SL+ CRS CEN AC KDLWRCG+ QY NGY AE T + G+ Y R FPG PFRD E+ S + + +VCTPS+ Sbjct: 62 GCRIFGSDTGECT----EQAEF-LQYMPFCGPLLPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMYNKLVIQRQLYEADASLNSQGVDEWGNKGEIVPRYTENKDCQDALKNYMCWLNFPRCDNAGRSLIMCRSVCENFFKACMQHKDLWRCGDPQYVNGYSAEISTTVNQAGELQYFRYPFPGSPFRDNEFTSDKLEALVVCTPSL 260
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: A0A485LR81_9STRA (Aste57867_24742 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LR81_9STRA) HSP 1 Score: 195 bits (496), Expect = 3.370e-58 Identity = 98/216 (45.37%), Postives = 130/216 (60.19%), Query Frame = 1 Query: 88 CYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAE-EPETDSNGDPVYLRDYFPGQPFRDVEWASGR-QPKIVCTPSIKGA 729 C ++GSD G C+ E SEF L PFC + YS CVPK L W+N+++ KD ++ Q Y +V QR +E D L K G+DE+G KG VPR+T++ DC AF+ Y+C++NFPRCDD G SL+ CRS CEN AC KDLWRCG+ Q+ NGY AE + G Y R FPG PFRD ++++ + Q +VCTPS+ A Sbjct: 18 CRLFGSDTGECQ----EQSEF-LKYMPFCGPLLPYSTCVPKAQTL----------WYNHSVKTKDLFISQMYKKLVTQRELLEADTGLHKAGVDEWGAKGEIVPRYTENVDCQNAFRNYMCWLNFPRCDDAGMSLIMCRSVCENFFKACMQHKDLWRCGDPQFVNGYAAEISTYANQAGVLQYYRYPFPGSPFRDNQFSADKTQALVVCTPSLLNA 218
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: A0A024T935_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T935_9STRA) HSP 1 Score: 192 bits (488), Expect = 8.500e-57 Identity = 99/235 (42.13%), Postives = 137/235 (58.30%), Query Frame = 1 Query: 58 ILTGGKSVHGCYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAE-EPETDSNGDPVYLRDYFPGQPFRDVEWASGRQPKI-VCTPSIKGAA-APSLQPW 753 +++G + C I+GSD G C+ E ++F L PFC + Y+ CVP+ L W+N+++ KD ++ Q + ++ QR E D ++ KQG+DE+G G VPR+T++KDC AF+ Y+C++NFPRCDD G SL+ CRS CEN AC KDLWRCG+ QY NGY AE + G Y R FPG PFRD + + R + VCTPS+ AA P L W Sbjct: 19 VMSGRQVAWSCRIFGSDTGECK----EQADF-LQYMPFCGPLLPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKMIAQRQIYEADLEMLKQGVDEWGALGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLILCRSVCENFFKACMQHKDLWRCGDPQYVNGYSAEISTFANKAGVLQYYRAPFPGSPFRDNAFTADRLDALPVCTPSLLNAADGPRLAVW 238
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: A0A7S1C8M7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C8M7_9STRA) HSP 1 Score: 192 bits (489), Expect = 1.260e-56 Identity = 101/257 (39.30%), Postives = 144/257 (56.03%), Query Frame = 1 Query: 85 GCYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAEEPET-DSNGDPVYLRDYFPGQPFRDVEWASGRQPKIVCTPSIKGAAAPSLQPWGRRFHSKVAARAGIRIRFGVVPVVGAIAGLLLA 852 GC+I G+D G CE ED E R+ PFC+ ++Y ACVP++ L + N+T+ KD WV + + +V+ R Q E ++LQ GI E G +G V RF ++ DC A+K ++C++NFPRCD++ S++ CRS CEN M C+ DL+RCG+ +++ G E E + D +G P+Y R +PGQPFRD E+ P VCTPSIKGAA P R G V GA+ G ++A Sbjct: 57 GCHIQGTDSGVCEDV--EDFELRM---PFCAPIVQYRACVPRFQEL----------FSNHTVRAKDDWVARTFKNIVDLRKQYETSEELQDAGITETGEEGEIVVRFFENPDCESAYKHFMCWLNFPRCDEEDASMILCRSVCENFMETCEYDADLYRCGDPRFYGGLEPEADDILDDDGLPIYWRAMYPGQPFRDNEFDEEDNPIAVCTPSIKGAAPP---------------------RAGAAAVAGAVVGAVVA 277
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: W4FF43_9STRA (FZ domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF43_9STRA) HSP 1 Score: 185 bits (469), Expect = 4.500e-54 Identity = 97/218 (44.50%), Postives = 129/218 (59.17%), Query Frame = 1 Query: 88 CYIYGSDIGYCEPSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAEEPETDSN--GDPVYLRDYFPGQPFRDVEWASGRQPKI-VCTPSIKGAA 732 C I+GSD G C+ E S+F L PFC + Y+ CVP+ L W+N+++ KD ++ Q + +V QR E D +Q G+DE+G G VPR+T++KDC AF+ Y+C++NFPRCDD G SLV CRS CEN AC KDLWRCG+ QY +GY AE T +N G Y R FPG PFRD + + + + VCTPS+ AA Sbjct: 22 CRIFGSDTGECK----EQSDF-LQYMPFCGPILPYTTCVPRAQTL----------WYNHSVKSKDLFLAQMFKKIVVQRQLYEADVAMQSAGVDEWGGLGEIVPRYTENKDCQDAFRNYMCWLNFPRCDDAGRSLVLCRSVCENFFKACMQPKDLWRCGQPQYVDGYTAE-ISTSANMAGVLQYYRAPFPGSPFRDNAFTADKLEALAVCTPSLLNAA 223
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Match: T0SC41_SAPDV (FZ domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SC41_SAPDV) HSP 1 Score: 184 bits (468), Expect = 6.350e-54 Identity = 101/240 (42.08%), Postives = 136/240 (56.67%), Query Frame = 1 Query: 73 KSVHGCYIYGSDIGYCE-PSLYEDSEFRLAATPFCSSFIKYSACVPKYDPLPPSRDFPDGRWFNNTMGIKDAWVEQHYNLVVNQRLQIEGDKDLQKQGIDEYGNKGAPVPRFTDSKDCPKAFKAYLCYINFPRCDDDGNSLVTCRSACENLMVACQNQKDLWRCGESQYFNGYEAEEPETDSN-GDPVYLRDYFPGQPFR-DVEWASGRQPKIVCTPSIKGAAAPSLQPWGRRFHSKVAA 783 + + C I G+ G C+ PS++ L PFC ++Y+AC+P+ + W+N+++ KD ++ Q Y +V QR E D DL DE+GN G VPRFT+++DC AF+ Y+C++NFPRCDD G SLV CRS CEN AC KDLWRCG+ Y NGYE E +N G+ Y R FPG PFR +V + G Q VCTPS+ + PS+ RR H V A Sbjct: 13 RGLLACRIMGASTGECQTPSVF------LQYMPFCGPLLQYTACIPEAQTI----------WYNHSVKSKDLFLSQMYQKLVKQREYFEQDVDLNNAKRDEWGNTGEIVPRFTENRDCQDAFRNYMCWLNFPRCDDAGVSLVMCRSVCENYFKACMQAKDLWRCGDPAYVNGYEPEISTYANNLGELQYYRFPFPGSPFRSNVFTSDGTQALPVCTPSLLNGS-PSIYDVLRRLHLVVLA 235 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1309.2437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1309.2437.1 >prot_L-elsbetiae_contig1309.2437.1 ID=prot_L-elsbetiae_contig1309.2437.1|Name=mRNA_L-elsbetiae_contig1309.2437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=294bp TRKGSGIRSIAWVVVPIAAILTGGKSVHGCYIYGSDIGYCEPSLYEDSEFback to top mRNA from alignment at L-elsbetiae_contig1309:6508..11017- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1309.2437.1 ID=mRNA_L-elsbetiae_contig1309.2437.1|Name=mRNA_L-elsbetiae_contig1309.2437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4510bp|location=Sequence derived from alignment at L-elsbetiae_contig1309:6508..11017- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1309:6508..11017- >mRNA_L-elsbetiae_contig1309.2437.1 ID=mRNA_L-elsbetiae_contig1309.2437.1|Name=mRNA_L-elsbetiae_contig1309.2437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1764bp|location=Sequence derived from alignment at L-elsbetiae_contig1309:6508..11017- (Laminarionema elsbetiae ELsaHSoW15)back to top |