mRNA_L-elsbetiae_contig13017.2395.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: D7G3D4_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3D4_ECTSI) HSP 1 Score: 337 bits (863), Expect = 5.100e-103 Identity = 178/228 (78.07%), Postives = 187/228 (82.02%), Query Frame = 1 Query: 1 QVLVPHLGSLTGGHTTPDVTGKPLKGVMFDLSHLGVSCQDNLDLVDLPSSYTELYGLAKSPHASAAAAEGAATGHETDPAVCLVCGQVLAAGSKMSALGQVGECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENYY 684 QVL+PHLGSLTGGHTTPD+TGKPLKGV+FDLSHLGVSCQDN DLV+LP SYTELYGLAKSPHASAAAAEGAA G ETDPAVCLVCGQVLAAG+K +G VGECTLHARECG GVGVFFLVQRR CVVLLIRDSRGAYY SIYLDDHGEEDAQL+RGRPLFLNKHRYD+LKQLYLRH+VA EVSAIRASSDRVIRENYY Sbjct: 1654 QVLMPHLGSLTGGHTTPDLTGKPLKGVVFDLSHLGVSCQDNHDLVELPESYTELYGLAKSPHASAAAAEGAAAGLETDPAVCLVCGQVLAAGAK--GMGHVGECTLHARECGAGVGVFFLVQRRVESPW-------------------------CVVLLIRDSRGAYYPSIYLDDHGEEDAQLRRGRPLFLNKHRYDSLKQLYLRHKVAQEVSAIRASSDRVIRENYY 1854
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: D7FRC8_ECTSI (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRC8_ECTSI) HSP 1 Score: 306 bits (783), Expect = 4.070e-102 Identity = 171/240 (71.25%), Postives = 186/240 (77.50%), Query Frame = 1 Query: 1 QVLVPHLGSLTGGHTTPDVTGKPLKGVMFDLSHLGVSCQDNLDLVDLPSSYTELYGLAKSPHASAAAA-EGAATGHETDPAVCLVCGQVLAAGSKMSALGQVGECTLHARECGGGVGVF------FLVQRRTRXXXXXXXDET------RTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENY 681 QV++PHLGSLTGGHTTPD+TGKPLKGV+FDLS LGVSCQDN DLV+LP SYTELYGLA++PHASAAAA EGAA G ETDPAVCLV GQVLAAG K +G VGECTLHARECG GVG FLVQRR E T G P ++ + CVVLLIRDSRGAYY SIYLDDHGEEDAQL+ GRPLFLNKHRYD+L+QLYLRH+VA EV AIRASSDRVIRENY Sbjct: 18 QVVMPHLGSLTGGHTTPDLTGKPLKGVVFDLSRLGVSCQDNDDLVELPRSYTELYGLARNPHASAAAAAEGAAAGLETDPAVCLVFGQVLAAGEK--GMGHVGECTLHARECGAGVGASAGVGASFLVQRRVESPWFGFRRERTGYRRHEQTTG--PRDSLCSIYDGCVVLLIRDSRGAYYPSIYLDDHGEEDAQLRHGRPLFLNKHRYDSLRQLYLRHKVAQEVLAIRASSDRVIRENY 253
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A6H5K8R4_9PHAE (E3 ubiquitin-protein ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8R4_9PHAE) HSP 1 Score: 208 bits (529), Expect = 4.240e-58 Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 1 Query: 1 QVLVPHLGSLTGGHTTPDVTGKPLKGVMFDLSHLGVSCQDNLDLVDLPSSYTELYGLAKSPHASAAAAEGAATGHETDPAVCLVCGQVLAAGSKMSALGQVGECTLHARECGGGVGVFFLVQRR 372 QVL+PHLGSLTGGHTTPD+TGKPLKGV+FD+SHLGVSCQDN DLV+LP SYTELYGLAKSPHASAAAAEGAA G E D AVCLVCGQVL AG+K +G VGECTLHARECG GVGVFFLVQRR Sbjct: 2648 QVLMPHLGSLTGGHTTPDLTGKPLKGVVFDISHLGVSCQDNHDLVELPESYTELYGLAKSPHASAAAAEGAAAGPERDRAVCLVCGQVLVAGAK--GMGHVGECTLHARECGAGVGVFFLVQRR 2769
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A836CB31_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB31_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.670e-46 Identity = 106/233 (45.49%), Postives = 132/233 (56.65%), Query Frame = 1 Query: 7 LVPHLGSLTGGHTTPDVTGKPLKGVMFDLSHLGVSCQDNLDLVDLPSSYTELYGLAKSPHASAAAAEGAATGHETDPAVCLVCGQVLAAGSKMSALGQV-------GECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENYY 684 L+P LG+ GG T +TG+ +DLSH + LV LP +TELY K P+ + A A+ DPAVCL+CG+VLAA K++A G G CT HAR CGG VGVFFLVQR C VLL R R AY+ S+YLD+HGEED L+RGRPL+L++ RY AL+ Y +HR+A EV+AIRASSDRVIREN+Y Sbjct: 2327 LLPFLGTAAGGVPTQAITGRRAASCAYDLSHGAPAAWHAPRLVALPRLFTELYARVKGPYTALAHAD-------FDPAVCLLCGRVLAAAHKLAAPGXXXXXXXAEGACTAHARACGGDVGVFFLVQR-------------------------------CQVLLARGGRAAYWASLYLDEHGEEDVGLRRGRPLYLSEQRYGALRLAYAQHRIAQEVTAIRASSDRVIRENFY 2521
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A7S0C9S2_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C9S2_9STRA) HSP 1 Score: 137 bits (345), Expect = 2.090e-34 Identity = 87/223 (39.01%), Postives = 123/223 (55.16%), Query Frame = 1 Query: 37 GHTTPDVTGKPLKGVMFDLSHLGVSCQDN---LDLVDLPSSYTELYGLAKSPHASAAAAEGAATGHETDPAVCLVCGQVLAAGSKMSAL----GQVGECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENYY 684 G++ +TG L M+D+SHLG+ +DL+ LP S+ ELYGL G ET A+CL+ G V+ +GS +L G CT+HAR+ G G+GVFFLVQ+ C VLL+ +++ AY S+Y+D+HGEED L+RGRPLFL K RY++LK L+ +H + EV+ IR++SDRVIR+N+Y Sbjct: 286 GYSLDQITGSRL---MYDMSHLGLVHNVGTVGIDLIQLPESFVELYGLVNRVKGEVTDESDDYNGSET--AICLLTGSVMRSGSLRRSLITPSRPHGSCTVHARKVGSGIGVFFLVQK-------------------------------CTVLLMHNNKSAYSASLYVDEHGEEDPGLRRGRPLFLKKTRYESLKFLWRQHGIPREVAQIRSTSDRVIRDNWY 472
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A7S1GNK1_CYCTE (E3 ubiquitin-protein ligase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GNK1_CYCTE) HSP 1 Score: 135 bits (341), Expect = 4.830e-34 Identity = 93/241 (38.59%), Postives = 129/241 (53.53%), Query Frame = 1 Query: 7 LVPHLGSLTGGHTT-PDVTGKPLK-----GVMFDLSHLG-VSCQD--NLDLVDLPSSYTELYGLAKSPHA--SAAAAEGAATGHETDPAVCLVCGQVLAAGSKMSALGQV----GECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENYY 684 ++P+ SL G P G P + VM DLSHLG + C+D LV LP S+ ELY L S AA + G T+ A+CL+ G V+ +G+ + + G CTLHAR+ G G+GVFFLVQ+ C VLL+ +++ AY S+Y+D HGEED L+RGRPLFLN+ RY AL+ L+ + + EV+ IR++SDRVIR+N+Y Sbjct: 229 IIPYQPSLLGIEDIGPGTRGAPFEVQSASSVMCDLSHLGMIHCKDVPTKCLVRLPKSFVELYSLVNKVKGRDSFAAVDDTDDGGSTETAICLLTGAVMRSGAPRRSYNRATRPAGACTLHARQVGSGIGVFFLVQK-------------------------------CTVLLMHNNKSAYSPSLYVDQHGEEDPGLRRGRPLFLNEARYRALETLWRQQGIPREVAQIRSTSDRVIRDNWY 438
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A7S4ACA5_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ACA5_9STRA) HSP 1 Score: 128 bits (321), Expect = 3.060e-30 Identity = 84/211 (39.81%), Postives = 118/211 (55.92%), Query Frame = 1 Query: 79 VMFDLSHLG-VSCQDN--LDLVDLPSSYTELYGLAKSPHA--SAAAAEGAATGHETDPAVCLVCGQVLAAG----SKMSALGQVGECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENYY 684 VM DLSHLG V C+D L+ LP S+ ELYG+ +A+ E + G + A+CL+ G V+ +G S + G CT+HARE G G+G+FFLVQ+ C VLL+ +++ AY S+Y+D+HGEED L+RGRPLFLN R AL+QL+ + + EV+ IR++SDRVIR+N+Y Sbjct: 1661 VMSDLSHLGLVHCKDTPTFSLIRLPKSFVELYGIVGKVKGREESASLEDSDDGGNAETAICLLTGTVMRSGLARRSYHRSQRPPGACTVHARENGCGIGIFFLVQK-------------------------------CTVLLMHNNKSAYSASLYVDEHGEEDPGLRRGRPLFLNDARLRALEQLWRQQGIPREVAQIRSTSDRVIRDNWY 1840
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A7S3YGE2_HETAK (E3 ubiquitin-protein ligase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YGE2_HETAK) HSP 1 Score: 107 bits (268), Expect = 9.880e-26 Identity = 76/207 (36.71%), Postives = 104/207 (50.24%), Query Frame = 1 Query: 70 LKGVMFDLSHLGVSCQDN-LDLVDLPSSYTELYGLAKSP-HASAAAAEGAATGHETDPAVCLVCGQVLAAGSKMSALGQVGECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENYY 684 L+ + D SHL + LV LP +TELY K P HA + + DPA+CL+CG+V+AAG+ + G G+CT HA CG G G F L QR VLL+R S+ AY Y+D+HGE D L+RG+PL L + RY L+ L+LR V EV+ +R + R+IR++YY Sbjct: 8 LRRRLADRSHLPQLARGRRAGLVPLPRDFTELYARVKDPFHAWSVP--------DFDPALCLLCGEVVAAGNHV---GPQGDCTRHAARCGAGCGAFLLAQRGC-------------------------------VLLLRGSKAAYAPGPYVDEHGEHDPGLRRGKPLALCEARYAELEGLWLRGGVGQEVARLRGQAARIIRDDYY 172
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A4D9D1X7_9STRA (E3 ubiquitin-protein ligase n=6 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D1X7_9STRA) HSP 1 Score: 107 bits (267), Expect = 5.060e-23 Identity = 74/218 (33.94%), Postives = 104/218 (47.71%), Query Frame = 1 Query: 13 PHLGSLTGGHTTPDVTGK-----PLKGV------MFDLSHLGVSCQDNLDLVDLPSSYTELYGLAKSPHASAAAAEGAATGHETD---------------PAVCLVCGQVLAAGSKMSA---LGQVGECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNK 579 P+ SL G T P + PL+ + ++DLSH GVS +L LV LP YT+LY L K + + A++ A+G D PA+CL+CG +LAAG +M +G G CTLHAR CG G G+ L+ + + +LL RD+R +Y S Y+D +GEED L+RGRPL L++ Sbjct: 2245 PYFPSLDGTFTMPGMDADSPRPGPLQNLAQEDLPLYDLSHFGVSDDVDLRLVPLPEHYTQLYSLLKDQYWTVASSTSHASGDRIDGGSAGAGEVRRGIEDPALCLLCGAILAAGPRMQGGTHIGSPGVCTLHARACGSGTGLMLLINKGS-------------------------------ILLFRDNRATFYPSPYVDQYGEEDPNLRRGRPLSLSE 2431
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Match: A0A1E7FSF3_9STRA (E3 ubiquitin-protein ligase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FSF3_9STRA) HSP 1 Score: 100 bits (250), Expect = 6.280e-22 Identity = 71/208 (34.13%), Postives = 108/208 (51.92%), Query Frame = 1 Query: 79 VMFDLSHLGVSCQDN---LDLVDLPSSYTELYGLA---KSPHASAAAAEGAATGHETDPAVCLVCGQVLAAGSKMSALGQVGECTLHARECGGGVGVFFLVQRRTRXXXXXXXDETRTTAGGFPVLNISERFSVCVVLLIRDSRGAYYQSIYLDDHGEEDAQLKRGRPLFLNKHRYDALKQLYLRHRVAHEVSAIRASSDRVIRENYY 684 VM DLSHLG+ + + L+ LP S+ ELYG+ K S A + G+ ++ A+CL+ G V+ +GS R++ R T G + + ++ C VLL+ +++ AY S+Y+D+HGEED L+RGRPLFLN R AL+QL+ + + EV+ IR++SDRVIR+N+Y Sbjct: 113 VMSDLSHLGLIHRKDTPTFSLIRLPKSFVELYGIVSKVKGREESTALDDSDDVGN-SETAICLLTGTVMRSGSTRRPY------------------------HRSQRPPGACTLHARKTGSGIGIFFLVQK---CTVLLMHNNKSAYSASLYVDEHGEEDPSLRRGRPLFLNDARLRALEQLWRQQGIPREVAQIRSTSDRVIRDNWY 292 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13017.2395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13017.2395.1 >prot_L-elsbetiae_contig13017.2395.1 ID=prot_L-elsbetiae_contig13017.2395.1|Name=mRNA_L-elsbetiae_contig13017.2395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp QVLVPHLGSLTGGHTTPDVTGKPLKGVMFDLSHLGVSCQDNLDLVDLPSSback to top mRNA from alignment at L-elsbetiae_contig13017:914..5016- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13017.2395.1 ID=mRNA_L-elsbetiae_contig13017.2395.1|Name=mRNA_L-elsbetiae_contig13017.2395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4103bp|location=Sequence derived from alignment at L-elsbetiae_contig13017:914..5016- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13017:914..5016- >mRNA_L-elsbetiae_contig13017.2395.1 ID=mRNA_L-elsbetiae_contig13017.2395.1|Name=mRNA_L-elsbetiae_contig13017.2395.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1374bp|location=Sequence derived from alignment at L-elsbetiae_contig13017:914..5016- (Laminarionema elsbetiae ELsaHSoW15)back to top |