mRNA_L-elsbetiae_contig1300.2383.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1300.2383.1
Unique NamemRNA_L-elsbetiae_contig1300.2383.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: D7FXY2_ECTSI (Ketoacyl_synth_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY2_ECTSI)

HSP 1 Score: 454 bits (1167), Expect = 2.070e-156
Identity = 239/287 (83.28%), Postives = 252/287 (87.80%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVDAV 861
            QDMIQIGRCERMVVIAGDDASGE LLPWIGNGFRALGA+SIAADP+DAALPFD RRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRAS P      +       G MKARLLETQISNSAYHGASMDKHHIA+ELERFL A++RNWGISRDAIAE GVYFSHETCTHATPTASCAFNEV ALRQCFGE+LLSRLVIINTK          GFTGHPMGVSFEDVAAVE L RG+IPPTAN+P+VDP+LGKLRLS GG Y AKYAMRFAAGFGSQVAFALYA+VD+V
Sbjct:  190 QDMIQIGRCERMVVIAGDDASGEVLLPWIGNGFRALGASSIAADPSDAALPFDARRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASQPXXXXXXSTN-----GVMKARLLETQISNSAYHGASMDKHHIAIELERFLVAMERNWGISRDAIAESGVYFSHETCTHATPTASCAFNEVWALRQCFGEELLSRLVIINTK----------GFTGHPMGVSFEDVAAVEVLHRGIIPPTANNPAVDPSLGKLRLSQGGAYAAKYAMRFAAGFGSQVAFALYAAVDSV 461          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A6H5JDP7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDP7_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 9.360e-152
Identity = 241/289 (83.39%), Postives = 254/289 (87.89%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRAS--LPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVDAV 861
            QDMIQIGRCERMVVIAGDDASGE LLPWIGNGFRALGA+SIAADP+DAALPFD RRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRAS   PPP+           G MKARLLETQISNSAYHGASMDKHHIA+ELERFL A++RNWGISRDAIAE GVYFSHETCTHATPTASCAFNEV ALRQCFGE+LLSRLVIINTK          GFTGHPMGVSFEDVAAVE L RG+IPPTAN+P+VDP+LGKLRLS GG Y AKYAMRFAAGFGSQVAFALYA+VD+V
Sbjct:  617 QDMIQIGRCERMVVIAGDDASGEVLLPWIGNGFRALGASSIAADPSDAALPFDARRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASQPTPPPSTN---------GVMKARLLETQISNSAYHGASMDKHHIAIELERFLVAMERNWGISRDAIAESGVYFSHETCTHATPTASCAFNEVWALRQCFGEELLSRLVIINTK----------GFTGHPMGVSFEDVAAVEVLHRGIIPPTANNPAVDPSLGKLRLSQGGAYAAKYAMRFAAGFGSQVAFALYAAVDSV 886          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A7S2XTA8_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XTA8_9STRA)

HSP 1 Score: 293 bits (749), Expect = 4.550e-95
Identity = 165/286 (57.69%), Postives = 202/286 (70.63%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEA-VGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855
            QDM+  GR ER+VV+AGD+ASGE L+PW+G+GFRALGAA+I A   DAALPFD RR+GM+LGAGGIGMVLETE ++  R   A  GI  S+                  KARLL TQ SNSAYHGA++D+ HIA EL+RFL  ++   GIS+  IA  GVYFSHET THA+  +SC+ NEV+ALR+  G+ LLS+L+I+NTK          GFTGHPMGVSFEDVAAVE L + V+PP  N    D  LG+L +S GG Y  +YA+RFAAGFGSQVAFALYA+ +
Sbjct:   67 QDMLISGRAERVVVVAGDNASGETLMPWLGSGFRALGAATIEASVEDAALPFDKRRSGMILGAGGIGMVLETETSSMERIKNAGPGISCSV------------------KARLLATQYSNSAYHGAALDRKHIASELKRFLTDVELIHGISKAEIATHGVYFSHETSTHASSASSCSGNEVAALREALGDHLLSKLLILNTK----------GFTGHPMGVSFEDVAAVEVLMKQVVPPVVNFKEKDDYLGELNISKGGPYACRYALRFAAGFGSQVAFALYATAE 324          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A836C9U2_9STRA (Hydroxymethylglutaryl-coenzyme A synthase N terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U2_9STRA)

HSP 1 Score: 307 bits (787), Expect = 2.700e-93
Identity = 176/296 (59.46%), Postives = 202/296 (68.24%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAA--------RRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVDAVA 864
            QDM+ +GR  RM+VIAGDDASG+ALLPW+GNGFRALGAASIAA    A+ PFD  RNGM+LG+G IGMVLET  AAA        RR C                            ARLLETQISNSA+HGASMD+ HIA E+ERFL +++   G++R  IA  GVYFSHET THA+PTASCA+NE+ ALR CFG  LL  L +INTK          GFTGHPMGVSFEDVAAV+ L  GV+PPTAN+  VDP LG L+LS GG    KYA+RFAAGFGSQVA ALYA+ D  A
Sbjct:  813 QDMLTVGRAARMIVIAGDDASGDALLPWVGNGFRALGAASIAATAEAASRPFDAARNGMILGSGAIGMVLETRAAAAAAARPLAARRRC----------------------------ARLLETQISNSAHHGASMDRVHIAREMERFLASVEARHGVTRADIAARGVYFSHETGTHASPTASCAYNEIWALRACFGA-LLPSLTVINTK----------GFTGHPMGVSFEDVAAVQVLRSGVLPPTANTVDVDPTLGDLKLSRGGRSDVKYALRFAAGFGSQVALALYAASDEAA 1069          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A7S2RGL0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RGL0_9STRA)

HSP 1 Score: 292 bits (748), Expect = 1.470e-92
Identity = 159/285 (55.79%), Postives = 201/285 (70.53%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855
            QDM+  GR ER+VVIAGD+ASG+ LLPW+G+GFRALGAA+  A   DAALPFD RR+GM+LGAGGIG+VLETE ++  R               N D+  + +   +++ARLL TQ SNSA+HGA++D+ HIA ELERFL  ++   G+S+  +A  GVYFSHETCTHA  ++SCA NEV+ALR+ FG +LLS+++I+NTK          GFTGHPMGVSFEDVAAV+ L    +PP  N    D  LG L +S GG YP +YA+RFAAGFGSQV FALYA+  
Sbjct:  241 QDMLISGRAERVVVIAGDNASGKTLLPWLGSGFRALGAATTEAAVEDAALPFDKRRSGMILGAGGIGLVLETESSSQNRSSTI-----------NSDSIDSDSSQFSVRARLLATQYSNSAFHGAALDRKHIASELERFLSEVEIVHGVSKAEVATHGVYFSHETCTHANSSSSCAGNEVAALREAFGNELLSKMLILNTK----------GFTGHPMGVSFEDVAAVQVLMTQTVPPVVNYKEKDDYLGDLNISKGGPYPCRYALRFAAGFGSQVVFALYATAQ 504          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A4D9DA31_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA31_9STRA)

HSP 1 Score: 308 bits (788), Expect = 3.270e-92
Identity = 172/304 (56.58%), Postives = 213/304 (70.07%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGI------RASLPPPANGDANGTAAGGG---------------AMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTAN--SPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALY 843
            QD+IQ GRCER+VVIA D+ASG+ L+PW+G+GFRALGAASIAA  A+AA+PFD RR G++LGAG IGMVLETE A ARR+ E  G+      R S        A+  A+  G               A++ RL++TQ SNSAYHGA++D+HHIA ELERFL A+++ +GI+R AIA EGVY SHET THA+  +SCA NE+ ALR CFGE+ +  LVI+NTK          G+TGHPMGVSFED+AAV+ L  G+IP  AN    S DP LG + L  GG Y A+YA+RF+AGFGSQVAFALY
Sbjct: 1037 QDIIQQGRCERLVVIASDNASGDVLIPWLGSGFRALGAASIAATVAEAAIPFDKRRTGLVLGAGAIGMVLETEAAVARRYAEKTGLLPLSLTRNSSSASTTSTASSLASRSGPTATISEQHIKDFGLALRIRLIDTQYSNSAYHGAALDQHHIAGELERFLVALEKKFGITRQAIAREGVYLSHETSTHASDASSCAANEIFALRTCFGEEGMKNLVILNTK----------GYTGHPMGVSFEDIAAVQILRSGIIPRVANLDEASTDPYLGSINLGKGGKYAARYALRFSAGFGSQVAFALY 1330          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A812PXM5_SYMMI (Sch1 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812PXM5_SYMMI)

HSP 1 Score: 288 bits (737), Expect = 1.600e-91
Identity = 163/287 (56.79%), Postives = 199/287 (69.34%), Query Frame = 1
Query:    4 DMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAV--GIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGK-LRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855
            DMIQIGR ERM+VIAGD+AS +AL+PW+GNGFRALGAA+I     DAA PFD  R+GM+LG+GGIGMVLE+E  A RRH  A+  G   ++  PA              K RLL +  +NSAYHGA++D+ HIA E+ERF+ + +R   I R  IA+ GVYFSHET T+A+PTASCA NE+  LR+ FGED    L+I+NTK          GFTGHPMGVSFEDV AVE L  G +P  AN   +DP LG  +RLS GG+YP +YA+RFAAGFGSQ+A ALY  VD
Sbjct:  193 DMIQIGRAERMIVIAGDNASSDALMPWLGNGFRALGAATICPRIKDAARPFDAMRSGMILGSGGIGMVLESEEGARRRHVTALKYGQAHAIKRPA-------------FKCRLLGSLYTNSAYHGAALDREHIAEEMERFIASAEREHSIHRSEIAKYGVYFSHETSTNASPTASCASNELYGLRKVFGEDF-KNLLILNTK----------GFTGHPMGVSFEDVVAVEVLSTGRVPAIANLEHIDPHLGNNVRLSPGGMYPCRYALRFAAGFGSQIAMALYGGVD 455          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A1E7FF62_9STRA (Ketoacyl_synth_N domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FF62_9STRA)

HSP 1 Score: 287 bits (735), Expect = 4.750e-90
Identity = 163/283 (57.60%), Postives = 197/283 (69.61%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYAS 849
            QDM+  GR ER+VV+AGD+ASGE L PW+G+GFRALGAA+      DAALPFD RR+GM+LGAGGIG+VLETE ++  R       + SL P               +KARLL TQ SNSAYHGA++D+ HIA EL+RFL  I+   GIS+  IA  GVYFSHETCTHA+  +SC+ NEV+ALR  FG++LLS+L+I+NTK          GFTGHPMGVSFEDV AVE L R  +PP  N    D  LG L+LS GG Y  +YA+RFAAGFGSQV FALYA+
Sbjct:  297 QDMLISGRAERVVVVAGDNASGETLFPWLGSGFRALGAATTKGVAKDAALPFDKRRSGMILGAGGIGIVLETELSSLERQ------KNSLNPFE-------------IKARLLATQYSNSAYHGAALDRKHIASELKRFLSDIELIHGISKAEIATHGVYFSHETCTHASSASSCSGNEVAALRVAFGDELLSKLLILNTK----------GFTGHPMGVSFEDVCAVEVLLRQTVPPIPNYAERDDYLGDLKLSKGGPYACRYALRFAAGFGSQVVFALYAT 550          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: B8BSY1_THAPS (Ketoacyl_synth_N domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSY1_THAPS)

HSP 1 Score: 287 bits (735), Expect = 6.320e-90
Identity = 164/284 (57.75%), Postives = 197/284 (69.37%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPP-PANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYAS 849
            QDM+  GR ER+VV+AGD+ SG  LLPW+G+GFRALGAA+      DAA PFD RR+GM++GAGGIGMVLETE       C+    R  LPP P     N        ++ARLL TQ SNSA+HGA++D+ HIA EL+RFL  ++   GIS+  IA  GVYFSHET THA+  ASCA NEV+ALR  FG +LLS+L+I+NTK          GFTGHPMGVSFEDVAAVE L R V+PP  N    D  LG +++S GG Y  +YA+RFAAGFGSQVAFALYAS
Sbjct:  304 QDMLISGRAERVVVVAGDNGSGGTLLPWLGSGFRALGAATTKEAVEDAACPFDKRRSGMIIGAGGIGMVLETE-----TSCQQ---RMKLPPVPGCQPCN--------IRARLLATQYSNSAFHGAALDRKHIASELQRFLNDVELIHGISKAEIATHGVYFSHETSTHASAAASCAGNEVAALRSAFGNELLSKLLILNTK----------GFTGHPMGVSFEDVAAVEVLLRQVVPPMPNYKEKDDYLGDIKISKGGAYACRYALRFAAGFGSQVAFALYAS 561          
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Match: A0A7S2LNP4_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LNP4_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.160e-89
Identity = 166/285 (58.25%), Postives = 202/285 (70.88%), Query Frame = 1
Query:    1 QDMIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPFDVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTAAGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRDAIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKACYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKLRLSTGGVYPAKYAMRFAAGFGSQVAFALYASVD 855
            QDM+  GR ER+VV+AGD+ASGE LLPW+G+GFRALGAA+  A   DAALPFD RR+GM+LGAGGIGMVLETE +A                    +A  TA    ++KARL+ TQ SNSAYHGA++D+ HI  EL+RFL  ++   GIS+  IA  GVYFSHET THA+  ASCA NEV+ALR  FG++LLS+L+I+NTK          GFTGHPMGVSFEDV AV+ L    +PP AN    D  LG+L+LS+GG YP +YA+RFAAGFGSQVAFALYA+ D
Sbjct:  798 QDMLISGRAERVVVVAGDNASGETLLPWLGSGFRALGAATTKAAVEDAALPFDKRRSGMILGAGGIGMVLETESSA--------------------NARLTATADFSIKARLVATQYSNSAYHGAALDRKHIGSELQRFLTEVEFVHGISKSDIAANGVYFSHETFTHASDAASCAGNEVAALRTAFGDELLSKLMILNTK----------GFTGHPMGVSFEDVTAVQVLLSQTVPPIANYKEKDDYLGELKLSSGGSYPCRYALRFAAGFGSQVAFALYATAD 1052          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1300.2383.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXY2_ECTSI2.070e-15683.28Ketoacyl_synth_N domain-containing protein n=1 Tax... [more]
A0A6H5JDP7_9PHAE9.360e-15283.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2XTA8_9STRA4.550e-9557.69Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A836C9U2_9STRA2.700e-9359.46Hydroxymethylglutaryl-coenzyme A synthase N termin... [more]
A0A7S2RGL0_9STRA1.470e-9255.79Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A4D9DA31_9STRA3.270e-9256.58Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A812PXM5_SYMMI1.600e-9156.79Sch1 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A1E7FF62_9STRA4.750e-9057.60Ketoacyl_synth_N domain-containing protein n=1 Tax... [more]
B8BSY1_THAPS6.320e-9057.75Ketoacyl_synth_N domain-containing protein n=1 Tax... [more]
A0A7S2LNP4_9STRA1.160e-8958.25Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1300contigL-elsbetiae_contig1300:20821..25808 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.0
Seed ortholog evalue3.3e-126
Seed eggNOG ortholog2880.D7FXY2
KEGG rclassRC00004,RC00503
KEGG koko:K01641
KEGG ReactionR01978
KEGG Pathwayko00072,ko00280,ko00650,ko00900,ko01100,ko01110,ko01130,map00072,map00280,map00650,map00900,map01100,map01110,map01130
KEGG ModuleM00088,M00095
Hectar predicted targeting categoryother localisation
EggNOG free text desc.3-oxoacyl-[acyl-carrier-protein] synthase activity
EggNOG OGsCOG0304@1,KOG1394@2759
EC2.3.3.10
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Ec32 ortholog descriptionHydroxymethylglutaryl-CoA synthase
Ec32 orthologEc-19_002030.1
Exons6
Model size906
Cds size873
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1300.2383.1prot_L-elsbetiae_contig1300.2383.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1300 20848..25802 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815483.3325446-UTR-L-elsbetiae_contig1300:20820..208471622815483.3325446-UTR-L-elsbetiae_contig1300:20820..20847Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1300 20821..20847 -
1691682920.2789414-UTR-L-elsbetiae_contig1300:20820..208471691682920.2789414-UTR-L-elsbetiae_contig1300:20820..20847Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1300 20821..20847 -
1622815483.4106796-UTR-L-elsbetiae_contig1300:25802..258081622815483.4106796-UTR-L-elsbetiae_contig1300:25802..25808Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1300 25803..25808 -
1691682920.3580399-UTR-L-elsbetiae_contig1300:25802..258081691682920.3580399-UTR-L-elsbetiae_contig1300:25802..25808Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig1300 25803..25808 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815483.3462465-CDS-L-elsbetiae_contig1300:20847..209791622815483.3462465-CDS-L-elsbetiae_contig1300:20847..20979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 20848..20979 -
1691682920.290382-CDS-L-elsbetiae_contig1300:20847..209791691682920.290382-CDS-L-elsbetiae_contig1300:20847..20979Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 20848..20979 -
1622815483.3562055-CDS-L-elsbetiae_contig1300:21602..217161622815483.3562055-CDS-L-elsbetiae_contig1300:21602..21716Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 21603..21716 -
1691682920.299688-CDS-L-elsbetiae_contig1300:21602..217161691682920.299688-CDS-L-elsbetiae_contig1300:21602..21716Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 21603..21716 -
1622815483.3668494-CDS-L-elsbetiae_contig1300:22620..228421622815483.3668494-CDS-L-elsbetiae_contig1300:22620..22842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 22621..22842 -
1691682920.3113875-CDS-L-elsbetiae_contig1300:22620..228421691682920.3113875-CDS-L-elsbetiae_contig1300:22620..22842Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 22621..22842 -
1622815483.3775268-CDS-L-elsbetiae_contig1300:23508..235921622815483.3775268-CDS-L-elsbetiae_contig1300:23508..23592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 23509..23592 -
1691682920.3237798-CDS-L-elsbetiae_contig1300:23508..235921691682920.3237798-CDS-L-elsbetiae_contig1300:23508..23592Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 23509..23592 -
1622815483.3883529-CDS-L-elsbetiae_contig1300:24227..243351622815483.3883529-CDS-L-elsbetiae_contig1300:24227..24335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 24228..24335 -
1691682920.3377068-CDS-L-elsbetiae_contig1300:24227..243351691682920.3377068-CDS-L-elsbetiae_contig1300:24227..24335Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 24228..24335 -
1622815483.3998752-CDS-L-elsbetiae_contig1300:25589..258021622815483.3998752-CDS-L-elsbetiae_contig1300:25589..25802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 25590..25802 -
1691682920.347169-CDS-L-elsbetiae_contig1300:25589..258021691682920.347169-CDS-L-elsbetiae_contig1300:25589..25802Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1300 25590..25802 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1300.2383.1

>prot_L-elsbetiae_contig1300.2383.1 ID=prot_L-elsbetiae_contig1300.2383.1|Name=mRNA_L-elsbetiae_contig1300.2383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=291bp
MIQIGRCERMVVIAGDDASGEALLPWIGNGFRALGAASIAADPADAALPF
DVRRNGMLLGAGGIGMVLETEGAAARRHCEAVGIRASLPPPANGDANGTA
AGGGAMKARLLETQISNSAYHGASMDKHHIALELERFLGAIQRNWGISRD
AIAEEGVYFSHETCTHATPTASCAFNEVSALRQCFGEDLLSRLVIINTKA
CYLPAELRPGFTGHPMGVSFEDVAAVEALFRGVIPPTANSPSVDPALGKL
RLSTGGVYPAKYAMRFAAGFGSQVAFALYASVDAVAPPIA*
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mRNA from alignment at L-elsbetiae_contig1300:20821..25808-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1300.2383.1 ID=mRNA_L-elsbetiae_contig1300.2383.1|Name=mRNA_L-elsbetiae_contig1300.2383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4988bp|location=Sequence derived from alignment at L-elsbetiae_contig1300:20821..25808- (Laminarionema elsbetiae ELsaHSoW15)
CAGGACATGATCCAGATCGGGCGCTGCGAGCGCATGGTGGTGATCGCCGG CGACGACGCCTCGGGCGAGGCCCTGCTGCCGTGGATCGGGAACGGGTTCC GGGCCCTCGGGGCGGCTAGCATCGCGGCCGACCCCGCCGACGCGGCGCTG CCGTTCGACGTCCGGCGCAACGGCATGCTCCTCGGGGCCGGCGGCATCGG CATGGTCTTGGAGACAGAGGTGGGCGGGTAGTTTCTGGAGTAACGCACAT GTGTATGTATGTACCTATAAGTGACGTCATTGTTGACGAGGGTGGGGAGT GCTGAGTCCTGCTCGCGATAAAACATAACAGGCAGGCACCGCGGGAGGGC CCCCCTCCCCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCCAGTCGTAGT GGAGGAAAGGGGGCCAGTGGGGCAGACGACGAATATGCCACTACAATGGG AGGAGAAAACAAAAAATAAAGTGTTGTAGTTTGCTTGTTGTGGTGTGATC TGGGGTGCCGGGCTGGTCCCGGTTGGGGCTTTGAGGACGAGACAAAGAGT GTGTGGGGGGTGTTTGGAGGAGCGGAGCAGAGGTGCTGCCCGTGCTTGCG TAAATGCTCAGGGCTGGCTGGCTGTGGCATTGAAGTCGTGCTTCCGGGGG GGGTGAGTTGGGTTGGTTGGCGACAGGGGCAGGCGGGTATCGTGGGTTTT GTTGTGGATTGTACATATATATACCCTTGGGGAGTAGCTTTGGAAGGAAT GATTCTGGGAAGAGGAAGTGAGAAGGTGGGGAGCCGGGCGTCGTGTGTCG ATTGTCTGATTCTATCTCCTTTGCCTCCACGTCGTTTCGCTCATGTCGCC TCCTGTCTTTCCGACTCGTGGTACATGTGTACATAGGCTTCCGGCAGCAG GGCCCCCAATTCTGAAGAAGTGACCGCGGTGGGGGATTTTTCACTGTATT TCCTAGATGAAACCCCCCTGCGCTGCCCCTACAGCTCTTTTTGAGAACCG GCGGCTGGCTCTATTGTGGGGAGCCTATAGGACCAGCGTGCAGCAGTTTG GGGATGCATACAGAGGAGCATCGCGCTACCTATGAGAGCAATAGAGAAAG AGCAGCGGCAGGCACGCGCCAAGATATTCACACATGCTCGTAAAATCACG GAAAATGGCGAGACTCATTTGTCGACTTTTTCTGCCGAGAGTCAAAGGCA CGTGGTACATTCTTGCTTCGCAGAAGTGCGACACTTGGATGATATATAGA AGTATATGCACAGGTTGTCGGCAGGACAGAGACGAAAGAAACAGACACGC GGGCGGGCAGTAACACGAACACAGAAGCAGCCGAGAGTTCACCGCTTCCC TTCAAGCGCCTCTTGACTTGACCCTCCCACCTCGACAATCAAGCCGGGCG AAACCTGCGCGTTACATCGCTTGTTTTCTTATTTCATTTCCCCGGTTTGA CTATCATCCTTTTGCTCGACCAGGGCGCCGCCGCCCGGCGGCACTGCGAG GCTGTCGGGATCCGCGCCTCGCTTCCCCCTCCGGCCAACGGCGACGCCAA CGGTACTGCTGCTGGTGGCGGGGCGATGAAGGTGGGTAGGGTTCGGTGCA AACCTAAAGGTTCTGGGTGGGGTACATTAGTGGTGTGGCGGATCTCAAGC CTGGCGTGTACTATTTTGGTTTTTAGATATACAGTACGTACTTCTAGTAT CAGTGCACTGTCACGGAAGGAGCGCACGCCACGTTGGACGGTGCTTAGGT GGTTCCGTGTGTGCTTGAATTCCTACAGAGACATCGTCCGTTTTCGCGTG TGTCTGCTGGGCGTGATGTGCCGGTCGTGGTACTGACAAGATTCCCTCTT TCTTTTCCGGAGGGGGGGGGGGGGTACAAAAGGCACGGGGCAGCGATATC GGGTGTGCTCGTCCTGGTGTTGCTGGATTTTTGCTCTCTTTGGGCGGGAC CTTGACTTCACTTGTGATTTGGACACTGAGCATCCGAGCCGAGCTTTTCG AGTAGATGAGCCGTGCTCGAGTTGTGGTTTTGCGTTATGGGAGACCTTTT TGTGCTGAAGACGTCAGGGGTGGGGTGTCTCTCTCCCCTGATCTGTTCCC AACTCCCCGCCCTTGCAGGCAAAAGCTCACGTGCGCGGCGTTATTCCGTT GGGTGTGTGCATGTTTCGATGTGTGTGCGTGCGTGTGCGTGTGCGCGTGT TGTGTTTTTTGCACAGGCGAGACTGCTGGAAACCCAGATCTCCAACTCTG CCTATCACGGTGCCTCTATGGACAAGCACCACATCGCCCTCGAGCTGGAG GTGCGTCAAGTTGCTTAACAGTGCTGTTTTGTTCTGTCCCCTTGTTGTGC TCATTTCTTCGCATATCTGCTCTCTACGTGTGATGCCGCTGCAAGTACTC CGCCGCCTTCGTGGTGCAGGCACCACTGCTGTAAAGCTTGGCGGACACGT CTTTTTCGACGAAATAACAATCAGCGCGCCGCTTTGGCTCTCTTGTCTCT TCTGACAAAAACCTTGCGCATTAATAAATACGTCGACATACTTTCATCCC CAATCTTTCGTGTTCCGTTACGTACTCGCTACGCTGCCTGCATGCTCTTG ACAGCCAAGGAAGGCGTCCTCATCTTCGCCTGTATCAATTAATTGCATCA TAGATTCGTTATTGCACACAACGGTTCCTTTGATGTGTGTTCGTCTCGTG GATTATGCGTGTTGTTGTTTTTGTTGTTGTTGCCGCCTGGCGCTGTCTTG TGTTCGTCGGTTTCGTTGATGCGTCGTCCGCCTCTGGTGGCTCAACAATC GGACCTTTTGTTTGCCTCGTTGTTGTTGTGGGGTGCTGCGTTTTGCCAGC CAGGGAACCCCCACCATTTACTACGGTACGTTTCCTTTCATTCACGAACC GGTGTGTTTTACGTCTCTTTTTTTTTGCTTGGAAAAAAAACGAACACGAA ACGCCTAAAAATGCAGCGGTTCCTCGGGGCCATCCAACGGAACTGGGGTA TCAGCCGCGACGCCATTGCCGAGGAGGGGGTGTACTTCTCCCACGAGACG TGCACTCACGCTACTCCGACGGCCTCGTGCGCGTTCAACGAGGTGTCGGC CTTGCGGCAGTGTTTCGGGGAGGACCTGCTGTCGCGGCTCGTCATCATCA ACACCAAGGCATGTTACTTACCGGCGGAGCTAAGACCGGTGTCGTAGTTA AGAATTTACGATACCTGTGTCTTTAAAATACCGTAGGTGACACAAGATAC CACACCCCCTGGACAGATTTTCAAAGCTCGATTCCTCCCCAGCGAGAAGA ATGACAGTTTCGAAAGGGGTGGCGTTGGAAAGATCTAGTCGAGGGCTGTC CGAAAATGTGTCGTTTGGTGCTGACACCTTCTTCGTTACGGAGTAATGGA GCTCTAACATTCGGCCCAGGGGGTGTGGTATCTTGTGTCACCTACGGTAG CAGTGCCGTCTTGTATCTGATACTACATTCTTGCAGTCGGCGGCGGCGGC GGTTCTGCTGTTGTTGGGGCCTCGCACTACAGTAGTTGTCAAAACAACAC TAGGTGAAAAGACCACCGTCATCCACGGCCTTTTGGGTGATGGTGTGAGT GAGTGACGCACCACCGCCGTGCTGGCGGTGTTTGCGCTGCTGTGTTTCGT GTGTTTCATGGCTGCGCGCTGGGTTTGTGGCGCGTCGACGAAACCGGGCC TTGTGCATGCGACACCATACCACATCGCACAACACAGGCACGACGCGCTG GTGTTGTTGCCCGCTGAAGCTAATCCCTCATCGATAAATACGTAAGAGAG GGAGGGAGCCATGAAACGCTTTGCGGACTCGAAAGCCTAAATCGGTGCTC TCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTGTCTCGTGAACGTAT TTCGTATGCCGTACACCGCTCACGCCCACCCTTCGCCCGAGACTCCGCCT CAGAAGCAGGCGATTCGTGGTCAATTTTTGAACGGCATACTGCTGTACGG AGGCGAGCAACTGACGAGTACGCCCCCCCCTCCCGCCGCCGCCGCCGCCG CCGCGCTTCCTCCCCTCTTTGCATTTCGCGCGCCGTCGGCAGGGCTTTAC CGGGCACCCCATGGGCGTCTCTTTCGAGGATGTGGCGGCCGTCGAGGCGC TCTTCCGCGGCGTGATACCGCCTACGGCCAACAGTCCTTCGGTCGACCCC GCGCTGGTGAGAGAAGGGGAAGGCGGTACATAAACAGTCATATGCCACGC ATGGAGGGCTTCGCGGGGTAATTAATTTGTTGGGGGGTGTATGTGGAGGT TGCCCTTATGAGGGATATAAACTTCCTGCGGTCGGTCGAAGACATTTGAC CCTTTTTACATGTAGGGCATATATATACTTACATACATAGAAGTATTTAT TTATTTTTCACTCTGTTTTTAGCCTGAAATTTTGTCACAACCTGCCGAGA CATTTCTCGGTCTCGTGCGCCTGTCCTCGCCTCTTGGCCCGCTTGGTCTA CATACACAAGCGGCTGAAAAGCCGGCGCAAGTTGGACCGTACTCTGATCG ATCCCTGCACAACAGCCGGTCAGACCCCGTATGGAACGTGGCATGCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTATTTTCTCTGGGAAGAACC GTCGCACGCCGCGGGGGGGTCGCCGCGCCACGAACGGGCTGAGGNNNNNN NNNNCGCCCAACCCCCCGCCCGTTGTCCCGTCCTTTTCTTCCCCCCCCCC CCCCCCCCCCCCCCCCCCCGCCTCCTCCTTGGCCCCCCCCCCCCCCCCCC CCCCCCCGCCGCCGCCTATATTTTCTCAGGGGAAACTTCGTCTGAGCACC GGGGGGGTATACCCGGCCAAGTACGCGATGCGGTTTGCCGCCGGGTTCGG GAGCCAGGTGGCGTTTGCGCTGTACGCCTCGGTCGATGCTGTCGCGCCGC CCATTGCGTGACGGAACATCTAGTGTCAGAGCGAGAGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1300:20821..25808-

>mRNA_L-elsbetiae_contig1300.2383.1 ID=mRNA_L-elsbetiae_contig1300.2383.1|Name=mRNA_L-elsbetiae_contig1300.2383.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1746bp|location=Sequence derived from alignment at L-elsbetiae_contig1300:20821..25808- (Laminarionema elsbetiae ELsaHSoW15)
ATGATCCAGATCGGGCGCTGCGAGCGCATGGTGGTGATCGCCGGCGACGA
CGCCTCGGGCGAGGCCCTGCTGCCGTGGATCGGGAACGGGTTCCGGGCCC
TCGGGGCGGCTAGCATCGCGGCCGACCCCGCCGACGCGGCGCTGCCGTTC
GACGTCCGGCGCAACGGCATGCTCCTCGGGGCCGGCGGCATCGGCATGGT
CTTGGAGACAGAGATGATCCAGATCGGGCGCTGCGAGCGCATGGTGGTGA
TCGCCGGCGACGACGCCTCGGGCGAGGCCCTGCTGCCGTGGATCGGGAAC
GGGTTCCGGGCCCTCGGGGCGGCTAGCATCGCGGCCGACCCCGCCGACGC
GGCGCTGCCGTTCGACGTCCGGCGCAACGGCATGCTCCTCGGGGCCGGCG
GCATCGGCATGGTCTTGGAGACAGAGGGCGCCGCCGCCCGGCGGCACTGC
GAGGCTGTCGGGATCCGCGCCTCGCTTCCCCCTCCGGCCAACGGCGACGC
CAACGGTACTGCTGCTGGTGGCGGGGCGATGAAGGGCGCCGCCGCCCGGC
GGCACTGCGAGGCTGTCGGGATCCGCGCCTCGCTTCCCCCTCCGGCCAAC
GGCGACGCCAACGGTACTGCTGCTGGTGGCGGGGCGATGAAGGCGAGACT
GCTGGAAACCCAGATCTCCAACTCTGCCTATCACGGTGCCTCTATGGACA
AGCACCACATCGCCCTCGAGCTGGAGGCGAGACTGCTGGAAACCCAGATC
TCCAACTCTGCCTATCACGGTGCCTCTATGGACAAGCACCACATCGCCCT
CGAGCTGGAGCGGTTCCTCGGGGCCATCCAACGGAACTGGGGTATCAGCC
GCGACGCCATTGCCGAGGAGGGGGTGTACTTCTCCCACGAGACGTGCACT
CACGCTACTCCGACGGCCTCGTGCGCGTTCAACGAGGTGTCGGCCTTGCG
GCAGTGTTTCGGGGAGGACCTGCTGTCGCGGCTCGTCATCATCAACACCA
AGGCATGTTACTTACCGGCGGAGCTAAGACCGCGGTTCCTCGGGGCCATC
CAACGGAACTGGGGTATCAGCCGCGACGCCATTGCCGAGGAGGGGGTGTA
CTTCTCCCACGAGACGTGCACTCACGCTACTCCGACGGCCTCGTGCGCGT
TCAACGAGGTGTCGGCCTTGCGGCAGTGTTTCGGGGAGGACCTGCTGTCG
CGGCTCGTCATCATCAACACCAAGGCATGTTACTTACCGGCGGAGCTAAG
ACCGGGCTTTACCGGGCACCCCATGGGCGTCTCTTTCGAGGATGTGGCGG
CCGTCGAGGCGCTCTTCCGCGGCGTGATACCGCCTACGGCCAACAGTCCT
TCGGTCGACCCCGCGCTGGGCTTTACCGGGCACCCCATGGGCGTCTCTTT
CGAGGATGTGGCGGCCGTCGAGGCGCTCTTCCGCGGCGTGATACCGCCTA
CGGCCAACAGTCCTTCGGTCGACCCCGCGCTGGGGAAACTTCGTCTGAGC
ACCGGGGGGGTATACCCGGCCAAGTACGCGATGCGGTTTGCCGCCGGGTT
CGGGAGCCAGGTGGCGTTTGCGCTGTACGCCTCGGTCGATGCTGTCGCGC
CGCCCATTGCGTGAGGGAAACTTCGTCTGAGCACCGGGGGGGTATACCCG
GCCAAGTACGCGATGCGGTTTGCCGCCGGGTTCGGGAGCCAGGTGGCGTT
TGCGCTGTACGCCTCGGTCGATGCTGTCGCGCCGCCCATTGCGTGA
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