mRNA_L-elsbetiae_contig13.2377.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig13.2377.1
Unique NamemRNA_L-elsbetiae_contig13.2377.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: A0A6H5LGX5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGX5_9PHAE)

HSP 1 Score: 475 bits (1223), Expect = 2.160e-161
Identity = 263/353 (74.50%), Postives = 295/353 (83.57%), Query Frame = 1 
Query:   22 FLAPRSDPNLILGAIRRQLFHHRGAGRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSIAXXXXXXXXXXXXXXXXXXXXXXTAS-------LVEAVHRMNPESHPEVAAGRLGPQEVKDDFCEFFISRAAGQGGNGSSAGGAPLTVTLEGFREYYRDVGVCEPYDTVFVPMMEALWGVQEPHPADKDGRAKLTQALLPKLKQHSHGSETAAEVFRKTLRYYSLDS-GD-GAKHGG------VVGASGVESSLNNFGLYPEKQEIEAIFAAVGSPPGQPEEVDKILAYLCPPEPSMAPMF 1035
            FLAPRSDPN+IL  +RRQLFHHRGAGRKNV+EFQEAFKAWDGDGDH LSHFEFE+ALC  G+FLPVQEVNALFRRFD  G+GFADAEEALSALRVPL+KRRL VVDAAFSSIAXXXXXXXXXXXXXXX         +       LVEAV RMN + HPEVAAGR+GPQEVKDDFCEFFI RA G+ G+G +A GAP TV+LEGFREYYRDVGVCEPYDTVF+PM+EALWGV+EPHP D   R++LT+ LLPKLKQHS G+ETA EV RKTLRYYS D  G+ GAKH G      VVG SGVE SLN+FGLYP+K+E++ IFAA+GSP GQP++VDK+L YLCPPEP +APMF
Sbjct:   11 FLAPRSDPNIILAEVRRQLFHHRGAGRKNVIEFQEAFKAWDGDGDHMLSHFEFERALC--GIFLPVQEVNALFRRFDPRGDGFADAEEALSALRVPLSKRRLAVVDAAFSSIAXXXXXXXXXXXXXXXDVTTQRGDGTTRAVSLGLVEAVGRMNADGHPEVAAGRIGPQEVKDDFCEFFIDRA-GERGSGGAAAGAP-TVSLEGFREYYRDVGVCEPYDTVFIPMIEALWGVREPHPGDIR-RSELTKLLLPKLKQHSRGAETAGEVLRKTLRYYSEDDKGERGAKHSGXXXXXXVVGPSGVERSLNSFGLYPDKREVQDIFAALGSPKGQPQDVDKVLVYLCPPEPVLAPMF 358
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: D7FPT6_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT6_ECTSI)

HSP 1 Score: 387 bits (994), Expect = 1.480e-117
Identity = 207/328 (63.11%), Postives = 233/328 (71.04%), Query Frame = 1 
Query:   22 FLAPRSDPNLILGAIRRQLFHHRGAGRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSIAXXXXXXXXXXXXXXXXXXXXXXTASLVEAVHRMNPESHPEVAAGRLGPQEVKDDFCEFFISRAAGQGGNGSSAGGAPLTVTLEGFREYYRDVGVCEPYDTVFVPMMEALWGVQEPHPADKDGRAKLTQALLPKLKQHSHGSETAAEVFRKTLRYYSLDSGD--GAKHGG-----------VVGASGVESSLNNFGLYPEKQEIEAIFAAVGSPPG 966
            FLAPRSDPN+IL  IRRQLFHHRGAGRKNV+EFQEAFKAWDGDGDH LSHFEFE+ALCRCG+FLPVQEVNALFRRFD  G+GFADAE                  D   S+++                         LVEAV RMN + HPEVAAGR+GPQEVKDDFCEFFI RA G+ G+G +A GA L V+LEGFREYYRDVGVCEPYDTVFVPM+EALWGV+EPHP D + R++LT+ LLPKLKQHS G+ET  EV RKTLRYYS D     GA+HGG           VVG SGVE SLN+FGLYP+K+E+E    A   PPG
Sbjct:   11 FLAPRSDPNIILAEIRRQLFHHRGAGRKNVIEFQEAFKAWDGDGDHMLSHFEFERALCRCGIFLPVQEVNALFRRFDSRGDGFADAERG----------------DGTTSAVSL-----------------------GLVEAVGRMNADGHPEVAAGRIGPQEVKDDFCEFFIDRA-GERGSGGAAAGA-LAVSLEGFREYYRDVGVCEPYDTVFVPMIEALWGVREPHPGD-NRRSELTKLLLPKLKQHSRGAETTGEVLRKTLRYYSEDDNGERGARHGGXXXXXXXXXXXVVGPSGVERSLNSFGLYPDKREVEG--KAQRHPPG 294
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: A0A7S2UWW3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWW3_9STRA)

HSP 1 Score: 112 bits (281), Expect = 2.500e-24
Identity = 76/252 (30.16%), Postives = 112/252 (44.44%), Query Frame = 1 
Query:  190 LCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSIAXXXXXXXXXXXXXXXXXXXXXXTASLVEAVHRMNPESHPEVAAGRLGPQEVKDDFCEFFISRAAGQGGNGSSAGGAPLTVTLEGFREYYRDVGVCEPYDTVFVPMMEALWGVQEPHPADKDGRA-KLTQALLPKLKQHSHGSETAAEVFRKTLRYYSLDSGDGAKHGGVVGASGVESSLNNFGLYPEKQEIEAIF 942
            L  CGVFL   E+  LFR FD+ G+   + +E L  +  PLN+RRL +V  AF  +                       T S +E   +   + HP+VA G++ P +V +DF   F          GS  G A   VT E F +YY D+    P D  FV +ME  W + E   A+ D    +L   L  K+ + + G+E  A V RKT R++  +        G +       +L  FG++ E++   A F
Sbjct:    2 LATCGVFLKTPEITTLFRHFDVDGDCNINYDEFLKGMAPPLNERRLELVRRAFMMM---------------DVDGSGQLTVSDIEG--KFVVDQHPDVATGKIAPDQVLEDFLGSF---------EGSRQGNADGIVTWEEFSDYYHDLSASIPDDDYFVTVMEQCWMISEAQSAEMDVELDRLEGVLKSKIMEKTKGNEGEASVLRKTFRFFDDN------ESGTITMDEFRRALEVFGIFLERKHTAAFF 221
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: A0A0N4UY62_ENTVE (Uncharacterized protein n=1 Tax=Enterobius vermicularis TaxID=51028 RepID=A0A0N4UY62_ENTVE)

HSP 1 Score: 75.5 bits (184), Expect = 9.600e-12
Identity = 62/222 (27.93%), Postives = 94/222 (42.34%), Query Frame = 1 
Query:   25 LAPRSDPNLILGAIRRQLFHHRGAGRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSIAXXXXXXXXXXXXXXXXXXXXXXTASLVEAVHRMNPESHPEVAAGRLGPQEVKDDFCEFFISRAAGQGGNGSSAGGAPLTVTLEGFREYYRDVGVCEPYDTVFVPMMEALW 690
            LA   DP   +  +R Q      AG K++     +F+  D + + KL + EF+K L   GV +   EV++ F RFD    GF D +E L ALR P++K RL ++D AF  +                       T   ++ V+  N + HP+  +G    ++ K+D  + F++       N    G     VT E F  YY  +      D  F  MM   W
Sbjct:   33 LATAKDP---VERLRLQCLLRGNAGIKSLGR---SFRIMDDNENRKLGYDEFKKGLADFGVTMDEAEVSSAFNRFDKDNSGFIDFDEFLLALRPPMSKARLDIIDQAFKKL---------------DKTGDGVVTVDDMQGVY--NYQRHPQYISG----EKTKEDLFKQFLA-------NFEVDGHVDGKVTKEEFLNYYAGISASIDTDVYFDLMMRNAW 220
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: A0A0N5AV72_9BILA (Uncharacterized protein n=1 Tax=Syphacia muris TaxID=451379 RepID=A0A0N5AV72_9BILA)

HSP 1 Score: 73.2 bits (178), Expect = 5.820e-11
Identity = 52/198 (26.26%), Postives = 84/198 (42.42%), Query Frame = 1 
Query:   97 GRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSIAXXXXXXXXXXXXXXXXXXXXXXTASLVEAVHRMNPESHPEVAAGRLGPQEVKDDFCEFFISRAAGQGGNGSSAGGAPLTVTLEGFREYYRDVGVCEPYDTVFVPMMEALW 690
            G   +     +F+  D +G+ KLS+ EF+K L   GV +   EV   F+RFD    G  + EE L A+R P++K RL ++D AF  +                       T   ++ V+  N + HP+  +G    ++ ++D  + F++       N  + G     +T E F  YY  +      D  F  MM   W
Sbjct:   50 GNSGIKSLGRSFRVMDDNGNKKLSYDEFKKGLTDFGVAMDESEVMETFKRFDKDNSGNINFEEFLIAIRPPMSKARLDIIDQAFKKL---------------DKTGDGVITVDDMKGVY--NYQRHPQFISG----EKTQEDIFKQFLA-------NFEATGQVDGKITKEEFVNYYAGISASIDTDVYFDLMMRNAW 219
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: UPI00148BC450 (calcyphosin-like protein n=1 Tax=Drosophila innubila TaxID=198719 RepID=UPI00148BC450)

HSP 1 Score: 63.9 bits (154), Expect = 7.240e-8
Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 1 
Query:   64 IRRQLFHHRGAGRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSI 357
            +R Q F H  AG   +V    AF+  D DG   LS  EF+K +   G+ +   ++  +F+RFDI G G  +  E L  LR P+N  RL  +  AF  +
Sbjct:   33 LRLQCFSHGAAG---IVGLARAFRVMDNDGSQTLSLEEFKKGIINIGLDIDNDDIEDIFQRFDIDGNGTINMNEFLVQLRPPMNASRLDSMIKAFKKL 127
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: A0A1W7RAM7_9SCOR (EF-hand protein-like protein n=1 Tax=Hadrurus spadix TaxID=141984 RepID=A0A1W7RAM7_9SCOR)

HSP 1 Score: 61.2 bits (147), Expect = 3.850e-7
Identity = 49/198 (24.75%), Postives = 74/198 (37.37%), Query Frame = 1 
Query:   97 GRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSIAXXXXXXXXXXXXXXXXXXXXXXTASLVEAVHRMNPESHPEVAAGRLGPQEVKDDFCEFFISRAAGQGGNGSSAGGAPLTVTLEGFREYYRDVGVCEPYDTVFVPMMEALW 690
            G   +     AF+  D + D KL   E  + L   G+    +E   LFR  D  G G    +E L A+R P++K RL ++D AF+ +                       T   +  V+  N   HP+  +  +   E+ ++F   F +     G            +T E F  YY  V      D  FV MM + W
Sbjct:   16 GAHGIKGLGRAFRILDDNRDRKLDLEELREGLQDYGLSFTAEESAQLFREIDKDGSGTLHFDEFLRAIRPPMSKTRLDLIDQAFAKM---------------DKTGDGVITIEDLRGVY--NATYHPKFISTEMTEDEIFEEFLRSFDTPNDPDG-----------KITREDFLNYYAGVSASIDTDEYFVEMMTSAW 185
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: A0A0R3SHH4_HYMDI (Uncharacterized protein n=2 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A0R3SHH4_HYMDI)

HSP 1 Score: 55.1 bits (131), Expect = 8.330e-5
Identity = 29/87 (33.33%), Postives = 44/87 (50.57%), Query Frame = 1 
Query:   97 GRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSI 357
            G   ++     F+  D +GD KL   EF K     G+ L  +E+  +F   D  G G  D +E L ALR P+ K RL +++ AF+ +
Sbjct:   37 GGSGILGLGRQFRIIDDNGDKKLDMREFTKGCQDFGIDLTKEEIREVFEHLDKDGSGHIDFDEFLEALRPPMPKCRLELINQAFNKM 123
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BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Match: A0A0R3TT35_RODNA (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3TT35_RODNA)

HSP 1 Score: 54.3 bits (129), Expect = 9.380e-5
Identity = 28/87 (32.18%), Postives = 44/87 (50.57%), Query Frame = 1 
Query:   97 GRKNVVEFQEAFKAWDGDGDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSALRVPLNKRRLGVVDAAFSSI 357
            G   ++ F   F+  D +GD KL   EF K     G+    +E+  +F   D  G G  D +E L ALR P+ K R+ +++ AF+ +
Sbjct:   37 GGSGILGFGRQFRIIDDNGDKKLDMREFAKGCQDFGIDFTREEIREVFEHLDKDGSGHIDFDEFLEALRPPMPKCRVELINQAFNKM 123
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13.2377.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5LGX5_9PHAE2.160e-16174.50EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
D7FPT6_ECTSI1.480e-11763.11Heat Shock transcription factor n=1 Tax=Ectocarpus... [more]
A0A7S2UWW3_9STRA2.500e-2430.16Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0N4UY62_ENTVE9.600e-1227.93Uncharacterized protein n=1 Tax=Enterobius vermicu... [more]
A0A0N5AV72_9BILA5.820e-1126.26Uncharacterized protein n=1 Tax=Syphacia muris Tax... [more]
UPI00148BC4507.240e-835.71calcyphosin-like protein n=1 Tax=Drosophila innubi... [more]
A0A1W7RAM7_9SCOR3.850e-724.75EF-hand protein-like protein n=1 Tax=Hadrurus spad... [more]
A0A0R3SHH4_HYMDI8.330e-533.33Uncharacterized protein n=2 Tax=Hymenolepis diminu... [more]
A0A0R3TT35_RODNA9.380e-532.18Uncharacterized protein n=1 Tax=Rodentolepis nana ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig13contigL-elsbetiae_contig13:80971..88562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score386.7
Seed ortholog evalue1.1e-104
Seed eggNOG ortholog2880.D7FPT6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5169@1,KOG0627@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-18_001665.1
Exons9
Model size1890
Cds size1038
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig13.2377.1prot_L-elsbetiae_contig13.2377.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig13 81823..88562 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815481.6139832-UTR-L-elsbetiae_contig13:80970..818221622815481.6139832-UTR-L-elsbetiae_contig13:80970..81822Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13 80971..81822 -
1691682919.2487445-UTR-L-elsbetiae_contig13:80970..818221691682919.2487445-UTR-L-elsbetiae_contig13:80970..81822Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig13 80971..81822 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815481.628185-CDS-L-elsbetiae_contig13:81822..819261622815481.628185-CDS-L-elsbetiae_contig13:81822..81926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 81823..81926 -
1691682919.2634206-CDS-L-elsbetiae_contig13:81822..819261691682919.2634206-CDS-L-elsbetiae_contig13:81822..81926Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 81823..81926 -
1622815481.6404312-CDS-L-elsbetiae_contig13:82965..831011622815481.6404312-CDS-L-elsbetiae_contig13:82965..83101Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 82966..83101 -
1691682919.2741182-CDS-L-elsbetiae_contig13:82965..831011691682919.2741182-CDS-L-elsbetiae_contig13:82965..83101Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 82966..83101 -
1622815481.6532402-CDS-L-elsbetiae_contig13:84399..845161622815481.6532402-CDS-L-elsbetiae_contig13:84399..84516Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 84400..84516 -
1691682919.2841992-CDS-L-elsbetiae_contig13:84399..845161691682919.2841992-CDS-L-elsbetiae_contig13:84399..84516Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 84400..84516 -
1622815481.6731997-CDS-L-elsbetiae_contig13:85115..852861622815481.6731997-CDS-L-elsbetiae_contig13:85115..85286Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 85116..85286 -
1691682919.2920728-CDS-L-elsbetiae_contig13:85115..852861691682919.2920728-CDS-L-elsbetiae_contig13:85115..85286Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 85116..85286 -
1622815481.6886432-CDS-L-elsbetiae_contig13:85788..860161622815481.6886432-CDS-L-elsbetiae_contig13:85788..86016Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 85789..86016 -
1691682919.3011599-CDS-L-elsbetiae_contig13:85788..860161691682919.3011599-CDS-L-elsbetiae_contig13:85788..86016Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 85789..86016 -
1622815481.6984441-CDS-L-elsbetiae_contig13:86543..866281622815481.6984441-CDS-L-elsbetiae_contig13:86543..86628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 86544..86628 -
1691682919.3107505-CDS-L-elsbetiae_contig13:86543..866281691682919.3107505-CDS-L-elsbetiae_contig13:86543..86628Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 86544..86628 -
1622815481.709593-CDS-L-elsbetiae_contig13:87082..871551622815481.709593-CDS-L-elsbetiae_contig13:87082..87155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 87083..87155 -
1691682919.3204913-CDS-L-elsbetiae_contig13:87082..871551691682919.3204913-CDS-L-elsbetiae_contig13:87082..87155Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 87083..87155 -
1622815481.7198322-CDS-L-elsbetiae_contig13:88054..881571622815481.7198322-CDS-L-elsbetiae_contig13:88054..88157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 88055..88157 -
1691682919.3317916-CDS-L-elsbetiae_contig13:88054..881571691682919.3317916-CDS-L-elsbetiae_contig13:88054..88157Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 88055..88157 -
1622815481.7303944-CDS-L-elsbetiae_contig13:88541..885621622815481.7303944-CDS-L-elsbetiae_contig13:88541..88562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 88542..88562 -
1691682919.3452413-CDS-L-elsbetiae_contig13:88541..885621691682919.3452413-CDS-L-elsbetiae_contig13:88541..88562Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig13 88542..88562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig13.2377.1

>prot_L-elsbetiae_contig13.2377.1 ID=prot_L-elsbetiae_contig13.2377.1|Name=mRNA_L-elsbetiae_contig13.2377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=346bp
MAISGDPFLAPRSDPNLILGAIRRQLFHHRGAGRKNVVEFQEAFKAWDGD
GDHKLSHFEFEKALCRCGVFLPVQEVNALFRRFDIGGEGFADAEEALSAL
RVPLNKRRLGVVDAAFSSIASISAASATAAASSAESDGNDATTASLVEAV
HRMNPESHPEVAAGRLGPQEVKDDFCEFFISRAAGQGGNGSSAGGAPLTV
TLEGFREYYRDVGVCEPYDTVFVPMMEALWGVQEPHPADKDGRAKLTQAL
LPKLKQHSHGSETAAEVFRKTLRYYSLDSGDGAKHGGVVGASGVESSLNN
FGLYPEKQEIEAIFAAVGSPPGQPEEVDKILAYLCPPEPSMAPMF*
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mRNA from alignment at L-elsbetiae_contig13:80971..88562-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig13.2377.1 ID=mRNA_L-elsbetiae_contig13.2377.1|Name=mRNA_L-elsbetiae_contig13.2377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7592bp|location=Sequence derived from alignment at L-elsbetiae_contig13:80971..88562- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGATCTCAGGCGACCCGGTGAGTAAGGGAGGGGTGCAGGTAATGCA
TGGACATTTCGATCTGAGTTGTGCAGCCTTTGACATCAGCACACAAAGGT
CTCCTTTTTTTGGCAGTCACTGAAGTTTCGAGAAACTTTCAAACCCACAC
CCCTCTCCCAGCATTCCGGGCTGTGCTCTCAGCACCGAACAATCAGCGGT
GAACTCTGGCTTGGGAGGATATCTGCAACTCTTCCTCTTTTTGAAAGCAT
GAAGATCTAGTGGCGGGGTGCAAACATATCTAACATTCCTCCTGCTGAAG
TCAATTTGGAATTATCGGGCGTTGTTCCCGATCTCCATCATCTCCATCTT
GTACATACTGCTGCTGTGTGCTGTGGGGGGCTATGGTAACGCCTGTTTTT
CGCAGTTCTTGGCGCCTCGCTCCGACCCAAACCTTATCTTGGGAGCTATT
CGACGGCAGCTTTTTCACCATCGAGGAGCGGGCAGGAAAAATGTCGTCGA
GTTTCAAGGTGGGAGAGAGTCGCCGAAAGATCCGCCCTCTGGTATCTAAA
TATTTAGGTATGGATGCACTGCTGGTGTAGATATCTAAATAAGAGATCTA
CTAGGTATGTAGTCTAGACCACATGTTTATAATACATAGGAGTCTTCACA
TGTACAGGTTGAGGTGTGTTATTAAAGGTGCCCAGTGTTGTAGGCCGTGT
AACGATCGGAGGTCTTTTGCACCAACCGCCGTGCCTTCGGGAATCACTCT
GTTTTTCTTGGACACTCAAGAGCGCACGCCCCACGGCTGATCCATTCCCA
TTATATTTATGGGGTATGTATGTGTCCACTGACTGTACTGACTTGTGTTC
ACGCTGAACCCGACGCTAAGAGACTGAACTGCAGACTGAACATGACCCAT
GCCCAATATCGCTGCTGTGTATTTTTCCACACATTGAACCCTCACGACTG
TGCATGAGCACGCACTGCAACCCACTTACTTGGCCTGTGTCACGAAAGTC
GCTCTGCTGTATCGACATATGGTACATACGTACGTACGTATCATAGATGT
ACGTGCTGCCATCGCAGCAACCGATACTTGTCTTGCACTGCTGTGGAAAG
CTATGTACGTGCCGACCTTTGTGTGCCCCACCAACTGGGCGTGTCTTTTG
CTGTCTGCACCGCCTGTACCAGGCCATACGCAGAGCACGCTATCTGTCTA
CCGCTCCCCTGCATTTCAAACTTGCCTCGTGCTGCTACAACAGCAGTAGG
CCGATTGGCCGGCTGGCGTGGGTTAATGACATGATCCGACCGCGGTACTG
AAAACCAAACATCGCGAGCGACGTCTAAGCCGGCGTGTTGTTGTTAGTCC
CGACGCGTAGACAGCAAAGGACCGAAAAACAATCGCGCGCCGCCTCGATT
CGTGCAGAGGCTTTCAAGGCTTGGGACGGGGACGGAGATCACAAGCTTTC
GCACTTCGAGTTCGAAAAGGCGTTGTGTAGGTGAGCGTGGTTCCGCCCAT
CCGCCGCCCTTCGCCGGTTTGCGTTTGTGGGGTGCTTGGGTTGCCTGGCT
GGAGCTCCGATTTTTCAGGGAGCGCGCGCGAGAGAAAACGCTTCAGGTGC
AGCGTCTGTGGACCTTGGCATCGTCACTCGTTGCACCTCTCACGGGAGAG
GAGGTTCGAGAGGGAGCATCATGCAAGGCTGTAGAGGTGCAGCGGCGCGT
TTCCGCCAATTCGTTTTCGGCGTACCTACGTATAAATAATCCTCTGTCTC
ACCGTGTTTAAGGGTACTTGCATCCTGGGCCTCGACTTCCTCGAGTGCTC
TTTGGGCTTTTCTCTTACTTTGAATCCGCTTCATGCGCGTGTGTCGTTTG
TCGCCTTCGGTGGCTTGCGCGCGCCTCTCTCGCGTTTCTCGTCTGCTCTC
TTTTGTTGCGCGTGCTGGTGCTCAACGAATGTAGATGCGGGGTGTTCCTG
CCAGTCCAGGAGGTGAATGCCCTCTTCAGACGCTTCGACATCGGGGGGGA
AGGGTTCGCCGACGCTGAGGTGGGTAGACAAAACGTGCTTGGCCGGGCCG
TTAAAGCAGGCAGGATGGCCGGGGCGGTGGTTTGACACGGGGCGGTGCGT
CGACCTGGCTTGTCTAATTACACAGAAATTGCACCCAATAGTGTCTCTTC
GTAGTATCGTAGTTAGAGCTTGGCTCCTTTCGTGTGATCTCCCCCCAGCG
CACCATATGTGACCGATCGCTGCACGAACCTCGAAGTTGGATGCAGGACT
TTGGCGATACAGTGTCAGTAGTAGCAACGAAGTCACTGCTGCAAGAGCCC
CAGAGCGAATCGGGTGCTGCGTAAGATTTCGCAACACTCGACAATATTTG
GAAACAATTTACGAGTCCACTCCCATTTTGACGACAAAGATATGCTCGCG
TTTCGGATTCTCCCGCCGGAGGCTTTTCCGCATCTGGGGTATCGATTCAG
CCTCCCGTGGCCCTTGTATACCCCCCCCCCCTTATTTTACCCCGTGCCCC
CCCGCCCCTCCATCTAAATATGCTTGGCATTTTGCGGTCTTTACAGGAAG
CTCTCTCTGCGTTACGGGTGCCTCTAAACAAGCGTCGGCTTGGAGTGGTG
GACGCGGCGTTTTCATCGATTGCTTCCATTTCCGCTGCCTCCGCTACTGC
TGCTGCCAGTTCCGCGGAGAGTGACGGCAACGATGCCACTACGGCCTCGC
TAGTGGAAGCAGTGCATCGTATGAATCCGGAAAGCCACCCGGAGGTAGCG
GCAGGGAGGCTCGGCCCGCAGGAGGTGCGCAGCACGGTTTGATATGCCAT
GTCCCCCGCTTTTGGCCATCGAGCCGTTTCATTGGGTGCTTTTGGTTTGA
AGACGCCGGTGTGAGGTGCCCCAACATGATCGGCACGTTTCGTCTCTGGC
TGGGCATTTCTCGCCTTATTCGCGCGTTGCAGGACCAAAATAAACCTTCA
TCCTCCGGTTTGAGATCAAGCGGTGGTGAAGCAAGATGAAGACTACCAAG
CGCGAAACACGGCCGCCTATCCGCCCCCCGCACCCTCGTACTCATGCGTT
AGATGCGCTCCGTACGCCGGCCCCTGCACGCTTCCCCCTGGACCTCATGT
TGAAGCGAAAATGCGAAACCATGGGAGCAGCGTACGGCAACGAGATCCAT
GCCCGCCGACAATATCGTATGACAACAACCCTCAGCTTTTGATCCCCCTC
CTAATGGTGCTTTTGTATGTCATGAAAACGTGCGATCGGTCGGTCGACCG
ACGGCATCAACCGGAACATCGATCAGGTGAAGGACGACTTCTGCGAGTTC
TTCATCAGCCGCGCCGCCGGCCAAGGAGGAAACGGCTCATCGGCGGGCGG
CGCACCACTAACGGTAACGCTGGAAGGTTTCAGGGAGTACTACCGTGACG
TCGGAGTCTGCGAGCCCTACGACACGGTGTTTGTTCCCATGATGGAGGTG
GGGCGACGGCGAAGAAAGAAGATAGGGGAGGGTGCGGGCGGCACGATCCG
ATGAAGGGTGTGTCAAAACCTGCGCTGTACGACGAAGGCCAAGAACGAAC
AACGACTCTGCCGTAGCGTCATTTATACGCCCATGTGCATATTTATGTAC
GGCAGTCGGGTAGTGGCGAAAACGGCAAAGAGCAAAACAAAACGCACACG
AAACGAAGCAAAACGAAACTAACACAGGTCTGCCCAGCCATATTTGTTTT
TCGTTCATCACACTTCTTTCCAGCGCTCGAAGGGCTCCTTGCACGAGGGG
GCATCTTGCCAGAGCTCTGAACCGTGTTGCAAAGAAGGGTTCCTCTCCCT
GAGCCCCCCCTTCCGCGGTGCTTGCCTTCGATAGTTTTTTAGGCTGGCGC
TATTCCCAGCCAGCAGAGCCAGTGGTCTCAAGCGCCCGCGTTCCGATGAT
TGGCACAGCTTGTAGTCTGACGAGCTGCAGGCGATCGAAAGAACGTGCCG
AACACAGCTACTACTGTTCAGAGGCGCCAAGCAAGAGTGTCTCAATCTCC
CCCCTGATGTATGTATGATTTGTGCTGTTCCCGGTGTCGTGTGCAGGCTC
TGTGGGGGGTGCAGGAGCCCCACCCCGCGGACAAGGATGGGCGAGCCAAG
TTGACTCAGGCTCTTCTGCCCAAACTAAAGCAGCACTCGCACGGATCGGA
GACGGCCGCCGAGGTGAGTTTTCGCACCAACCGCAACCTGTCCGCCCGGC
CGATCTCGATGACGGCTGTATTTTGTTTTGTTTTTATTCGGAAACTCGGA
AAAAGCTCGTTCGACAGGCCTCTCTGGTTGAGAGGGCGCGAGAGTGGGTC
TTGAAAGAAGCCGCGCTCGGGCGGCCAAAGGGAACAACTTAAGAGTACAG
CTGTTACACAACAGCCTTGTCAGCGACGCGAACAAACAACTAAAATCAAC
GCCATAGAGACGGGTCCTGGAACAACTCTTCTCCGTGGGAAAGCGCTAAT
TGTATGTCAGGGAGTCTGTTTGGTACAAAACACCGCCGGCGGATGCCTGC
GTACAAATACTGGCTTGCTGTTGAGGGAAAAGGAAGACAGGCCCTCCGGG
CTCCCGGATATAATATGAAGTATGTAGCAGTAGTTAATTTTCAAGCAAGG
CCGTTCTGTCTCTTTGTCCCGGACGGGAGCTTCTGCAGACCGTGAAGATT
GCAAGCGGTGGCAGGGGCTGTCCGGCGGTGTGCGTTGGTTTGCTGGGATA
TTTCTCCGTTCGTTTCGTGGGGTCCGAGAATCGGCCAGATCCTTGCCATG
AGTATGTCTCTTTGGAAATTTCTTCGGGCGTCTTAAACCTAGTCGGAGCG
ATCCAGGTCCCGGAGATACCCTCTCAGACGCATACGCGCGCACACGCGCC
CTCACGACCGCCGCCTCTCTGTGTACCCACCCCACTCTCTTTGCATCTTT
CTCGCGGTCGACCTGTTGTCTAGCAACCTCCCGTTCGTTTTCCATCCACA
CATCCACGAGGCCTTGGCAAAATCTTTCCACGATTCTAGCATGACATTGC
GTGCATCATGTTTTTTTCGCTGTTCATCAGGGTCCTATCAGTACGGCGGT
CAAGGTGCTGCTGTCTACGCGCTTTTTGTCGCACAATTCCGAAAGCATAG
TATGTATCTTGAACAATGATTTTTCACAAAACCACTACTGCTGCCCAACC
TCTCTGCTGAGACCAGTTCGCTAGGAAATATCGTACATGTGTTTTTGTTC
GGGGCCTTAAAACCCGCCAACCTCCCTCTCTACCAAGAAAGGCCGTTGTC
GACAGAATGTCATCTTGTGTGGTTTGTAGCTAGCTAGCCCCCCGACAAAT
GTGCCATATGTACGATTTTTTTTAAAACGATCTCTCCGCCACCTCCGATC
CTGCTTCCCCTTCTGCTCCTCCTCAAACGTTGCTTCTCTTTCGAAACTAC
GCACGCACGCGCGCAACCCACCCACCCACCCACCCACACGCATGCCGACC
GACCCGGGAAGGTTTTCAGGAAGACCTTGCGGTACTACAGCCTGGACAGC
GGCGACGGCGCCAAGCACGGCGGCGTCGTGGGCGCATCCGGGGTGGAGAG
TTCTCTCAACAATTTCGGCTTGTATCCAGAGAAGCAGGAGATCGAAGGTG
CGTGGGGGGCTCTTATAGGTTGGGTTACGCTATTTAGGTGCCCACAGGCG
CGAAGGGGGCATGGTCGCGTGCATGGCCCTTGGCCAGACAGCCAGGCTCT
ATGTGCGGCCAGGAATCGTAGACCAGGAATGGGGTGCGCGCACGGGCCCT
CTGGGCCTTTCGGTTTTTGTGTTTGCTTTGGTCGCATGTACGAAAATGTG
TGTGTTTCCGCCTTGAAGGCCTTTCTATCTCTCTCTCTTTTTCTTTTTTT
TTTTCTATCTCTGTGCGCACTATTTACTGCGGCGTTTCTCCCAGGGAAAA
GGGCGCGGCATAAATTGCTCTACCGTACGGCAACTGATTTGAGGTGCTTG
GGGGGCAACCCGGAAGAGTCGTGCCGGCCTCTCGCTGTTGTGGTAGATGA
CAATTTGTCGCTGGCAGGGCCCACCGCTCGTTGTGTGTGCAGTAAAAAGC
ATGTGGAGCAAAGCACTTGTTTGACCGGAGCAACCCGTATGTATTCATCC
CCGGATTTTTTTTAATGAAAAGCACACGCCTCAGCCTCGGCTGCGCCCTG
AATTAGAACAGCCGCACCTCGGGCCAGTGGTGTGTCTGCTGCGAAAGCAT
TGGCGGGTCGACTGGTCGCTCTCAAGATTCTCGTTCGACGCTAAGATTTC
AATGCCTTTGGCTGGCATGTATTCCGTCCTTGTTCAACCGAGCGCATCTC
AAGCTAACCAACAATAGCTTCGTGCGATGTACTCTGTACGTAGGTAGCTG
ATCGACCGCTCCCACACGTTTCCTTTAAAGCGCTTGTCGCCCACCGAACC
GGCCCCATTCTTTCTTTCTCTCTTTCCTCTCCCCCGGGTACATGTTGTGT
CATACACACACTCCGCGCTACGATACATAGTGGCGCCGCACTACATGCAC
GTCCTCTCAGGACAATCACTTTACGGAAGTAACACTTCTCATTGCCCCTT
TTCCGTATGCTCGCCTCCCCCACCTTTCCGTTTGGTCAATGCATGTGGCC
GCCTTTTCTCCTTGTTGCGTGCATGTCGATCGACAGCCATTTTTGCCGCG
GTGGGGTCGCCCCCTGGACAGCCGGAGGAAGTCGACAAGATCTTGGCGTA
TCTTTGTCCCCCGGAACCGTCAATGGCACCAATGTTTTAGCTACAGTAGT
CATGAAGCGTATGATACATAGCTTTCGACGGTGCGTCGCCGGGTGTGTCT
CTCTTTCGTGTGGTGATCTTCGGTTTACTATGTAGATGCATGTATGTGTG
TTCTTGGCCTCACCGCCCGGCTGTTTTTTTTGCTCGGTCGTCAGCCGCGA
TGGTCTCGATGAAGAGTGCGCGATTCGTTTGCGCTACTTACTACTGTCTG
TGGGGTGAGTTGAGCCCTCGCGGTGCTGCAGATTGCTGTTCATTTGAGGT
GGCACGTTGGTGCGGATTACGTATGTACTCCGTATATCGGGGCGTTGTAT
TCATAGCAGTGAGGAGGCCAGAGAGTGAGACGATCAGCTGGTCTTTCGGC
GGATGAAAGGTACATACATAGCGCATTTAGCTGCTGGTGTTCTTCTCTTC
AGCGCGTATCGGACGGGGTTCAGTTGGGCGTGTGGTGGTGGTGAAACCTT
CGAGCTTAACTACTACTGCTGTCTGTAGTACTGCTGCTGTAGGTGCGGAA
TTGAAATTGGCATTGCGTACACGAGACGCTGGGACGAGCGTGGGGGGGTA
TTTCTACTGTTGCGTGAAATAAATATGGTATACTATGTACAACATATATA
TGTTGTGTAAAAAAATATCATCACTTGCTTGTGCTGCAGTTTTTGTTCTT
AGTCGGTCCTACGTAGTCTAGTCTATGTCTAGATATTACGTAATCGGAGT
GTACGATAGGTAGGTCTGGTACGGTTTCGTGTCGTGTTTCCAATACAAGA
GAGGTTCGGTGGTCGTCCGCTCTTGTCTCCCCCCCCCCCCTGCTTTGGAG
GGAAAGATTTTGGCTAAAATAATCAATGGGCGTGCAGCGTGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig13:80971..88562-

>mRNA_L-elsbetiae_contig13.2377.1 ID=mRNA_L-elsbetiae_contig13.2377.1|Name=mRNA_L-elsbetiae_contig13.2377.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=2076bp|location=Sequence derived from alignment at L-elsbetiae_contig13:80971..88562- (Laminarionema elsbetiae ELsaHSoW15)
ATGGCGATCTCAGGCGACCCGATGGCGATCTCAGGCGACCCGTTCTTGGC
GCCTCGCTCCGACCCAAACCTTATCTTGGGAGCTATTCGACGGCAGCTTT
TTCACCATCGAGGAGCGGGCAGGAAAAATGTCGTCGAGTTTCAAGTTCTT
GGCGCCTCGCTCCGACCCAAACCTTATCTTGGGAGCTATTCGACGGCAGC
TTTTTCACCATCGAGGAGCGGGCAGGAAAAATGTCGTCGAGTTTCAAGAG
GCTTTCAAGGCTTGGGACGGGGACGGAGATCACAAGCTTTCGCACTTCGA
GTTCGAAAAGGCGTTGTGTAGAGGCTTTCAAGGCTTGGGACGGGGACGGA
GATCACAAGCTTTCGCACTTCGAGTTCGAAAAGGCGTTGTGTAGATGCGG
GGTGTTCCTGCCAGTCCAGGAGGTGAATGCCCTCTTCAGACGCTTCGACA
TCGGGGGGGAAGGGTTCGCCGACGCTGAGATGCGGGGTGTTCCTGCCAGT
CCAGGAGGTGAATGCCCTCTTCAGACGCTTCGACATCGGGGGGGAAGGGT
TCGCCGACGCTGAGGAAGCTCTCTCTGCGTTACGGGTGCCTCTAAACAAG
CGTCGGCTTGGAGTGGTGGACGCGGCGTTTTCATCGATTGCTTCCATTTC
CGCTGCCTCCGCTACTGCTGCTGCCAGTTCCGCGGAGAGTGACGGCAACG
ATGCCACTACGGCCTCGCTAGTGGAAGCAGTGCATCGTATGAATCCGGAA
AGCCACCCGGAGGTAGCGGCAGGGAGGCTCGGCCCGCAGGAGGAAGCTCT
CTCTGCGTTACGGGTGCCTCTAAACAAGCGTCGGCTTGGAGTGGTGGACG
CGGCGTTTTCATCGATTGCTTCCATTTCCGCTGCCTCCGCTACTGCTGCT
GCCAGTTCCGCGGAGAGTGACGGCAACGATGCCACTACGGCCTCGCTAGT
GGAAGCAGTGCATCGTATGAATCCGGAAAGCCACCCGGAGGTAGCGGCAG
GGAGGCTCGGCCCGCAGGAGGTGAAGGACGACTTCTGCGAGTTCTTCATC
AGCCGCGCCGCCGGCCAAGGAGGAAACGGCTCATCGGCGGGCGGCGCACC
ACTAACGGTAACGCTGGAAGGTTTCAGGGAGTACTACCGTGACGTCGGAG
TCTGCGAGCCCTACGACACGGTGTTTGTTCCCATGATGGAGGTGAAGGAC
GACTTCTGCGAGTTCTTCATCAGCCGCGCCGCCGGCCAAGGAGGAAACGG
CTCATCGGCGGGCGGCGCACCACTAACGGTAACGCTGGAAGGTTTCAGGG
AGTACTACCGTGACGTCGGAGTCTGCGAGCCCTACGACACGGTGTTTGTT
CCCATGATGGAGGCTCTGTGGGGGGTGCAGGAGCCCCACCCCGCGGACAA
GGATGGGCGAGCCAAGTTGACTCAGGCTCTTCTGCCCAAACTAAAGCAGC
ACTCGCACGGATCGGAGACGGCCGCCGAGGCTCTGTGGGGGGTGCAGGAG
CCCCACCCCGCGGACAAGGATGGGCGAGCCAAGTTGACTCAGGCTCTTCT
GCCCAAACTAAAGCAGCACTCGCACGGATCGGAGACGGCCGCCGAGGTTT
TCAGGAAGACCTTGCGGTACTACAGCCTGGACAGCGGCGACGGCGCCAAG
CACGGCGGCGTCGTGGGCGCATCCGGGGTGGAGAGTTCTCTCAACAATTT
CGGCTTGTATCCAGAGAAGCAGGAGATCGAAGGTTTTCAGGAAGACCTTG
CGGTACTACAGCCTGGACAGCGGCGACGGCGCCAAGCACGGCGGCGTCGT
GGGCGCATCCGGGGTGGAGAGTTCTCTCAACAATTTCGGCTTGTATCCAG
AGAAGCAGGAGATCGAAGCCATTTTTGCCGCGGTGGGGTCGCCCCCTGGA
CAGCCGGAGGAAGTCGACAAGATCTTGGCGTATCTTTGTCCCCCGGAACC
GTCAATGGCACCAATGTTTTAGCCATTTTTGCCGCGGTGGGGTCGCCCCC
TGGACAGCCGGAGGAAGTCGACAAGATCTTGGCGTATCTTTGTCCCCCGG
AACCGTCAATGGCACCAATGTTTTAG
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