mRNA_L-elsbetiae_contig13.2376.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: A0A6H5L0A5_9PHAE (HSF_DOMAIN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A5_9PHAE) HSP 1 Score: 513 bits (1320), Expect = 5.930e-163 Identity = 475/976 (48.67%), Postives = 529/976 (54.20%), Query Frame = 3 Query: 243 MAVLLHGR-----CEDDDDVYTGT-DTSGIEVVAAGSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPGPVGR----VAIGGGAADAGDMMAA--RSPVADRSLSRDAHDNSKPRSRGPAFLP-RH--GAPGSDFPPQHHNPHPHHHPSPPSFSNHQHQYHNT---------------------GGRTHPRPPQHPLSAPRKSGGXXXXRMYXXXXXXXXXXXXXXXXXAVPSRGGQGPXXXXXXXAPGGWSAGXXXXXXXXXXXXXXXGADYERRNGXXXXXX-------------------TAHHQAY-RQGPAMGDTGGERGAPGQHGGSRGPGTGGAAVS-----------------SDKEQALAMWGLSALCQVASSATEAPLVGDEARGRETAAG---------ASRRLPDDGNRQQAKRHRGAGPAA--RSRRGWGAHDEXXXXXXXXXXXXXXXXXXXXXXXIHRRSPSNSSCGSISGSXXXXXXXXXXXXXXDSTHSSRPYGRRGTTAAANRGSNGGEVPATTTTTGIRIVSPQRASGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDEQVGDGVDMDDV------------EEESSKTEEEDMGDDENEEAPESDDGVKKAAWRGEHITGPAEVSPPLA--------EPRSTVPVPATTTAPATVTCQQRDLKADVEAETEAGLEGIGALFSQFCSGEDGSGGGGRLNTNASTSVFLATVTDSGDGGLREMAVFCAGPAGRAPDEAPPASLVRQVSLFLQGESAVAQDLRVYAEALDPAAVDVVVGRTNRQWRRGGEGEGELSTDGAKLLRVFCRYAACRLGRALEVASCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRQSAVAQRITPRLDECRWKWWRAAVRFS 2858 M V L R + D+D Y+ + D G++V++AGSVTSFVRKLFQMVQGECDSIVGFV DGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHG P VG + +GGG AD DMM +P+ SLSRD N+K RS G +FLP RH G G F P PSFSN QHQ H+ RP A RK+G RMY AVP XXXXXX APG AG X GA+Y+RR+G ++ QAY RQGPA+GD +RG+ G RG G ++K+ ALA++GLSALCQVAS ATEAP + G+ G SRRL D +R+Q KRHRG GP A RSRRGW + XXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX SGSGGVFCPTWDWGRAACEPA+RLPGSFVDRRFEEVD+QV +E S+ E DDE EA D A RGE I P E S P EPR T P V + RD +AD++AE + GLEGIGA FS CS G+ T A S FLATV +SGDGGLREMAVFCAGPAG+APD AP A L R+VSLFLQ E AVA+DLRVYAEALDPAAVD+VV + LS DG KLLRVFCR+AACRLGRALEVAS A XXXXXXXXXXXXXXXX L R A A+R+ P+LD CRWKWWRAAVRFS Sbjct: 1 MVVALEHRHDRNELDHDEDAYSRSGDVPGMDVMSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGVPARVGGGVAGLGVGGGGAD--DMMVVDRAAPIVGGSLSRDPLANNKARSHGLSFLPPRHADGGAGGAF-----RPXXXXXXXSPSFSN-QHQEHHQHXXXXXXXXXXXXXXXXXXXXXXXXXXRP------AHRKNGSSGSGRMYHASSSRGAGGGPSTGGAAVPXXXXX--XXXXXXGAPGFAWAGAGGRPVSSSXGP---GAEYDRRSGGVDGGSGMRATKAGEHRGFDDGRSSSSSSQAYSRQGPAIGD---DRGSA--LGRQRGDGXXXXXXXXXXXXXXXXXXXXXXXVTNKDHALALFGLSALCQVAS-ATEAPAAHKGSIGQVDEDGXXXXXXXXRGSRRLSDGVDRRQQKRHRGVGPEAEARSRRGWAVQESLGDEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXTSGSGGVFCPTWDWGRAACEPAMRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXXXRDEGESRQEFAQESDDEGPEA--RPDTSSTAHRRGEAIVTPDEASLPHVSVSFVGSDEPRPTPTAP--------VPPRPRDTRADMKAEADVGLEGIGAFFSHCCSAASGND-----TTRALESGFLATVANSGDGGLREMAVFCAGPAGKAPDAAPAAYLAREVSLFLQSEEAVAEDLRVYAEALDPAAVDIVVEESLGSSSNPAAVTQPLSPDGGKLLRVFCRFAACRLGRALEVASLVAESAEEXXXXXXXXXXXXXXXXQGLL----LQRHGAFARRVAPQLDSCRWKWWRAAVRFS 929
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: D7FPT6_ECTSI (Heat Shock transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPT6_ECTSI) HSP 1 Score: 518 bits (1334), Expect = 4.080e-162 Identity = 486/980 (49.59%), Postives = 536/980 (54.69%), Query Frame = 3 Query: 231 QASSMAVLL---HGRCEDD--DDVYTGT-DTSGIEVVAAGSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPGPVGRVAIGGGAADAG--DMMAA--RSPVADRSLSRDAHDNSKPRSRGPAFLPRHGAPG--SDFPPQHHNPHPHHHPSPPSFSNHQHQYHNTGGRTHPRPPQHPLS---------------------APRKSGGXXXXRMYXXXXXXXXXXXXXXXXXAVPSRG-GQGPXXXXXXXAPGGWSAGXXXXXXXXXXXXXXX----------GADYERR-------NGXXXXXXTAHH--------------QAY-RQGPAMGDTGGERGAPGQHGGSRGPGTGGAAVS------------SDKEQALAMWGLSALCQVASSATEAPLVGD-EARGRETAAGA---------SRRLPDDGNRQQAKRHRGAGPAAR--SRRGWGAHDEXXXXXXXXXXXXXXXXXXXXXXXIHRRSPSNSSCGSISGSXXXXXXXXXXXXXXDSTHSSRPYGRRGTTAAANRGSNGGEVPATTTTTGIRIVSPQRASGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDEQVGDGVDMDDV-----------EEESSKTEEEDMGDDENEEAPESDDGVKKAAWRGEHITGPAEVSPPLA---EPRSTVPVPATTTAPATVTCQQRDLKADVEAETEAGLEGIGALFSQFCSGEDGSGGGGRLNTNASTSVFLATVTDSGDGGLREMAVFCAGPAGRAPDEAPPASLVRQVSLFLQGESAVAQDLRVYAEALDPAAVDVVVGRTNRQWRRGGEGEGELSTDGAKLLRVFCRYAACRLGRALEVASCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLRQSAVAQRITPRLDECRWKWWRAAVRFS 2858 + + M V L H R E D +D Y+ + D G++VV+AGSVTSFVRKLFQMVQGECDSIVGFV DGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAP VG G G D G DMM +P+ SLSRD D++K RSRG +FLP A G S F P HH+ +HH PSFSN QHQ H H PP +P A RK+G R+Y A SRG G GP XXXXX XXXXXXXXXXXXXXX G +Y+RR NG H QAY RQGPA+GD G A G+ G +DK+ ALA++GLSALCQVAS ATEAP D E+ G+ G SRRL D +RQ KRHRG GP A SRRGW + XXXXXXXXXXXXXXXXXXXXX SGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVD+QV ++ S+ E DDE EA D A RGE + EVS LA EPR D +AD++AE + GL+GIGA FS CS + G T AS SVFLATV +SGDGGLREMAVFCAGPAG+APD A PA L R+VSLFLQ E AVA+DLRVYAEALDPAAVDVVV + LS DGAKLLRVFCR+AACRLGRALEVAS A XXXXXXXXXXXXXXXXXX L R A A+R+ P+LD CRWKWWRAAVRFS Sbjct: 324 ETAGMVVALEHRHDRNEPDLDEDAYSRSGDVPGMDVVSAGSVTSFVRKLFQMVQGECDSIVGFVADGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPARVGGGVAGLGVGDGGADDMMVVDRAAPIVGGSLSRDPLDSNKARSRGLSFLPPRHADGGVSAFRPPHHD---YHHS--PSFSN-QHQEH------HQHPPHYPXXXXXXXXXXXXXXXXXXXXXXPAHRKNGSSGSGRVYH----------------ASSSRGAGGGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGVEYDRRSGGVDGGNGMRATKAGGHRGFDDGRSPSSSSSSQAYSRQGPAIGDDRGS--AVGRQRGXXXXXXXXXXXXXXXXXXXXXXXVTDKDHALALFGLSALCQVAS-ATEAPAAHDNESIGQMDEDGGXXXXXXXRGSRRLSDVVDRQPQKRHRGVGPDADAGSRRGWAVQESSGXXXXXXXXXXXXXXXXXXXXXXX----------------------------------------------------------------XXXXXXXXTSGSGGVFCPTWDWGRAACEPAIRLPGSFVDRRFEEVDQQVVKXXXXXXXXXXXXXXXXXRDQGESRQEFAQKSDDEGPEA--RPDTGSAAHRRGEAMAITDEVSVSLAGSDEPRXXXXXX--------XXXXXXDAQADMKAEADVGLDGIGAFFSHCCS----AAASGNDTTRASESVFLATVANSGDGGLREMAVFCAGPAGKAPDAASPAYLAREVSLFLQSEEAVAEDLRVYAEALDPAAVDVVVEGSLGSSSNPVPVTQPLSPDGAKLLRVFCRFAACRLGRALEVASLVAESAEXXXXXXXXXXXXXXXXXXGLL----LQRHGAFARRVAPQLDSCRWKWWRAAVRFS 1190
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: A0A7S2ANP9_9STRA (Hypothetical protein n=4 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ANP9_9STRA) HSP 1 Score: 147 bits (372), Expect = 1.270e-33 Identity = 77/132 (58.33%), Postives = 96/132 (72.73%), Query Frame = 3 Query: 234 ASSMAVLLHGRCED-DDDVYTGTDTSGIEVVAAGSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQ 626 ++ MA R E+ +D+ G + GI + TSFVRKL+ +V E D IVGF+ DG++FEVKDP+RLE ++LPKYFRHSRFQSLVRQLNFYSFKK SKER +WIY+H F RD+P LL LKRKT+Q Sbjct: 7 SARMACSPPSRVEECPEDITEGGEMLGI------AKTSFVRKLYDLVTCESDDIVGFLPDGSSFEVKDPKRLEVEVLPKYFRHSRFQSLVRQLNFYSFKKASKERHMWIYRHELFHRDKPVLLEGLKRKTSQ 132
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: A0A4D9D5W3_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D5W3_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.470e-28 Identity = 66/116 (56.90%), Postives = 81/116 (69.83%), Query Frame = 3 Query: 270 EDDDDVYTGTDTSGIEVVAAGSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRK 617 EDD+D+ + S +F+RKLFQMV E + I+ F DG +F VKDP RLE ++LPKYFRHSRFQSLVRQLNFY FKKISKER +WIY+H F++ +P LL LKRK Sbjct: 47 EDDEDIQSDL---------VPSANTFIRKLFQMVTSENNDIISFTPDGLSFHVKDPVRLENEVLPKYFRHSRFQSLVRQLNFYDFKKISKERVIWIYRHKLFQQGKPHLLDDLKRK 153
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: I2CQX2_NANGC (HSF_DOMAIN domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX2_NANGC) HSP 1 Score: 126 bits (316), Expect = 6.430e-28 Identity = 66/124 (53.23%), Postives = 86/124 (69.35%), Query Frame = 3 Query: 324 AAGSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKT-NQHGAPGPVG-RVAIGGGAADAGD 689 A+ T FV+KLF MV E SI+ F DG +FEVK+P+RLE ++LP+Y+RH F S VRQLNFY+FKK+SKER++WIY+H F+R P+LL LKRKT N H P + +GGG A G+ Sbjct: 20 ASSQSTCFVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLDMLKRKTSNAHHPHHPYNIQHTMGGGRAGEGN 143
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: A0A4D9D0Y9_9STRA (HSF_DOMAIN domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0Y9_9STRA) HSP 1 Score: 125 bits (314), Expect = 1.130e-25 Identity = 58/100 (58.00%), Postives = 76/100 (76.00%), Query Frame = 3 Query: 324 AAGSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTN 623 A+ T FV+KLF MV E SI+ F DG +FEVK+P+RLE ++LP+Y+RH F S VRQLNFY+FKK+SKER++WIY+H F+R P+LL LKRKT+ Sbjct: 20 ASSQSTCFVKKLFTMVAVEDPSILSFTPDGKSFEVKNPKRLESEVLPRYYRHGHFTSFVRQLNFYNFKKVSKERNIWIYRHECFQRGRPQLLEMLKRKTS 119
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: B8BWZ1_THAPS (HSF_DOMAIN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWZ1_THAPS) HSP 1 Score: 122 bits (305), Expect = 3.140e-25 Identity = 60/109 (55.05%), Postives = 77/109 (70.64%), Query Frame = 3 Query: 330 GSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPGPVGRV 656 G+ + FV KLFQMV G D IV +V G AF + D RLE++ LP YFRHSRFQSLVRQLNFY+F+K+++ER+ W+Y H F RD+ E LH L+R+T PG GR+ Sbjct: 20 GAPSGFVMKLFQMVNGAEDDIVSWVPSGQAFRINDISRLEKETLPSYFRHSRFQSLVRQLNFYNFRKVNRERTFWVYYHPLFHRDQEENLHNLRRRT----CPGVDGRI 124
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: A0A7S2M136_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M136_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.520e-24 Identity = 60/108 (55.56%), Postives = 74/108 (68.52%), Query Frame = 3 Query: 330 GSVTSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPGPVGR 653 G+ + FV KL+QMV G D IV +V G AF + D RLE D LP YFRHSRFQSLVRQLNFY+F+KI++ER+ W+Y H F RD P+ L L+R+T PG GR Sbjct: 46 GTPSGFVLKLYQMVNGAPDDIVSWVPSGEAFRITDLSRLESDTLPSYFRHSRFQSLVRQLNFYNFRKINRERTFWVYYHPLFHRDHPDKLCELRRRT----CPGFDGR 149
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: A0A7S1ZYH7_9STRA (Hypothetical protein (Fragment) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZYH7_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.770e-24 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 3 Query: 339 TSFVRKLFQMVQGECDSIVGFVEDGTAFEVKDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPGPVGR 653 + FV KLFQMV G D ++ ++ G AF + D RLE + LP +FRHSRFQSLVRQLNFY+F+K+++ER+ WIYKH F RD P LH L+R+T PG GR Sbjct: 19 SGFVLKLFQMVNGAPDDVISWIPSGEAFRISDLNRLENETLPSFFRHSRFQSLVRQLNFYNFRKVNRERTFWIYKHPLFHRDRPYELHKLRRRT----CPGVDGR 119
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Match: B7G2S1_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2S1_PHATC) HSP 1 Score: 115 bits (289), Expect = 3.130e-23 Identity = 58/106 (54.72%), Postives = 77/106 (72.64%), Query Frame = 3 Query: 339 TSFVRKLFQMVQGECDSIVGFVEDGTAFEV-KDPRRLEQDILPKYFRHSRFQSLVRQLNFYSFKKISKERSVWIYKHAFFRRDEPELLHALKRKTNQHGAPGPVGR 653 + F+ KLFQMV G D ++ + +G AF + D RLE + LP+YFRH+RFQSLVRQLNFYSF+KI++ER+VWIYKH+ F RD PE L+ ++R+T PG GR Sbjct: 28 SGFILKLFQMVNGAPDKVISWTPNGDAFIIGSDLNRLESETLPQYFRHNRFQSLVRQLNFYSFRKINRERNVWIYKHSLFHRDRPEDLNMVRRRT----CPGMDGR 129 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig13.2376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig13.2376.1 >prot_L-elsbetiae_contig13.2376.1 ID=prot_L-elsbetiae_contig13.2376.1|Name=mRNA_L-elsbetiae_contig13.2376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=873bp MAVLLHGRCEDDDDVYTGTDTSGIEVVAAGSVTSFVRKLFQMVQGECDSIback to top mRNA from alignment at L-elsbetiae_contig13:74190..80231- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig13.2376.1 ID=mRNA_L-elsbetiae_contig13.2376.1|Name=mRNA_L-elsbetiae_contig13.2376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=6042bp|location=Sequence derived from alignment at L-elsbetiae_contig13:74190..80231- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig13:74190..80231- >mRNA_L-elsbetiae_contig13.2376.1 ID=mRNA_L-elsbetiae_contig13.2376.1|Name=mRNA_L-elsbetiae_contig13.2376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=5238bp|location=Sequence derived from alignment at L-elsbetiae_contig13:74190..80231- (Laminarionema elsbetiae ELsaHSoW15)back to top |