mRNA_L-elsbetiae_contig12803.2255.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: D7FXP8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXP8_ECTSI) HSP 1 Score: 462 bits (1190), Expect = 1.050e-150 Identity = 262/352 (74.43%), Postives = 274/352 (77.84%), Query Frame = 1 Query: 25 LSQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECFPEEKEGDEMEXXXXXXKKVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRYQKRTGVAPDASAPPSGILPVPEDSESDSDSEGGEGGDGEYGGEFVEAGARPRAVRGPEPAVAGWVAAGIAAGAIGEE 1080 L +IWRGLWYCMFMCDKAPVQRELAENLAGLL LFKDDR EGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFC LP A XXXXXXXX S A WDL L+GAMSDVME EVLTL PAPIGLRLHLADVWAEEAC AGG DMPTEAFLVALAPWLR AA PETN VVF+RT GVFEGLL FPE+K+G E E KKVF VE+D+VQACLFEVAAAPQTR+KRRVKLYELHRRYQKRTGV PDA+APPSGILP+PE ES DGEY GE+VEAGAR RA RGPEPAVAGWVAAGIA+GAI E Sbjct: 74 LLKIWRGLWYCMFMCDKAPVQRELAENLAGLLRLFKDDRAEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCCLPPPA-----------VEGQPKQXXXXXXXXNSPAEEAETSAKAGGVWDLGLLGAMSDVMEVEVLTLRPAPIGLRLHLADVWAEEACNAGGADMPTEAFLVALAPWLRVAAEPETNPVVFRRTFEGVFEGLLGLFPEDKDGMEEEEEE---KKVFAAVELDRVQACLFEVAAAPQTRDKRRVKLYELHRRYQKRTGVTPDATAPPSGILPLPE--ESXXXXXXXXXXDGEYDGEYVEAGARLRAARGPEPAVAGWVAAGIASGAISSE 409
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: A0A225WWZ0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WWZ0_9STRA) HSP 1 Score: 142 bits (358), Expect = 1.370e-32 Identity = 94/276 (34.06%), Postives = 137/276 (49.64%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLEC--FPEEKEGDEMEXXXXXXKKVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK PVQ EL+ NLAGL+ + F SF TM R+W +D LR+DK+Y+LVR FVRE +A R+ +WD LV ++ EV++ P GLR+HLADV+ E A G+D+ TEAF++ L P+ + E + VFKR VF+ +L F + E +E E KVF+ VE+ QVQ +F +A+A T E+ R LY L++++ Sbjct: 43 DKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRVPTSTG-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQ--------------------------------------------DWDEDLVQEFVTILSAEVVS--QLPNGLRMHLADVYLTEIYNAAGQDVTTEAFIILLEPFFTLLSS-EYDKTVFKRVRELVFDDMLTKYKFGPQSEQEEEETDAEEEDKVFEQVEVAQVQHRIFAIASADDTAERNRSALYTLYKKF 270
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: A0A2P4Y0J0_9STRA (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y0J0_9STRA) HSP 1 Score: 139 bits (351), Expect = 1.260e-31 Identity = 98/278 (35.25%), Postives = 142/278 (51.08%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECFP----EEKEGDEMEXXXXXXKKVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK PVQ EL+ NLAGL+ D + F SF TM R+W +D LR+DK+Y+LVR FVRE +A R+ +WD LV ++ EV++ P GLR+HLAD++ E A G+D+ TEAF+ L P+ + E + VFKR VF+ +L + EK+ + XXXXXX KVF+ VE+ QVQ +F +A+A T E+ R LY L++++ Sbjct: 43 DKLWKALFYCMWMSDKRPVQEELSSNLAGLVHRIPDSTL-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQ--------------------------------------------DWDEELVQEFVTILSAEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLLEPFFTLLSS-EYDKTVFKRVRELVFDDMLTKYKFGSQPEKDEEXXXXXXXXXNKVFEQVEVVQVQHRIFAIASADDTAERNRSALYTLYKKF 272
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: A0A836CJU2_9STRA (Nucleolar protein,Nop52-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJU2_9STRA) HSP 1 Score: 139 bits (349), Expect = 5.420e-31 Identity = 98/279 (35.13%), Postives = 139/279 (49.82%), Query Frame = 1 Query: 25 LSQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFC-RLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLR---AAAHPETNAVVF---KRTLGGVFEGLLECF-PEEKEGDEMEXXXXXXKKVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYEL 837 L++IW+GLWYCM+MCDKA VQ+ELA L+ + LF DD +G+RF +F + M+R W R+D R+DK+Y+L+R F RE L +C R A A + +D+ LV A ++ DE L LH P G R+H+ D++ E A G + TE + L PWL A P A +R +F+ LL P+ + E E XXXX F VE +Q LF++A+ TRE+ R +LY+L Sbjct: 96 LAKIWKGLWYCMWMCDKAEVQQELAVTLSKMTHLFVDDLNDGLRFQATFYIMMRRQWGRLDYYRVDKFYSLIRCFFREGLRYCLRSDPAADADDDDDE-----------------------------APSIYFDMQLVQAFMGIIRDECL-LH-LPNGYRMHMVDIFLPELKEAVGPQLTTEVLMAMLEPWLALLAAGGIPGQGAETLAFHRRVHQRIFDDLLTYVTPKAGKAQEGEESXXXXXXAFGAVEPVAIQKALFDIASGETTRERLRSQLYKL 343
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: A0A3M6V8T8_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6V8T8_9STRA) HSP 1 Score: 136 bits (342), Expect = 2.080e-30 Identity = 98/284 (34.51%), Postives = 147/284 (51.76%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECF---PEEKEGDEMEXXXXXXK-------KVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK PVQ EL+ NLA L+ + F +SF TMQR+W +D LR+DK+Y+LVR FVREA+A R+ +W+ LV ++D++ EV++ P G R+HLAD++ E A G+D+ +EAF+ L P+ + E + VFKR VF+ +L + P+ K G+E EXXXXXX KVF+ VE+ VQ +F +A+A T E+ R LY L++++ Sbjct: 43 DKLWKALFYCMWMSDKRPVQEELSSNLAALVHHIPSTE-SALAFVRSFFRTMQREWHGLDGLRLDKFYSLVRKFVREAVALLRVQ--------------------------------------------DWNETLVQELADILSTEVVS--QLPNGPRMHLADLYLTEIYNAAGKDIVSEAFVTLLEPFF-ILLNSEYDKTVFKRVRELVFDEMLSKYKFGPQTKTGEEEEXXXXXXXXXXXXXHKVFEKVELALVQHRIFAIASADATIERNRSALYTLYKKF 278
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: A0A3R7HW27_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HW27_9STRA) HSP 1 Score: 135 bits (341), Expect = 2.720e-30 Identity = 100/283 (35.34%), Postives = 140/283 (49.47%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECFP---------EEKEGDEMEXXXXXXKKVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK VQ EL+ NLA L+ + F SF TM R+W +D LR+DK+Y+LVR FVRE++A R+ +WD ALV ++ EV++ P GLRLHLAD++ E A D+ TEAF+ L P+ A E + VFKR VFE ++ + EEK XXXXXX KVF+NVE++QVQ +F +A+A T E+ R LY L++R+ Sbjct: 43 DKLWKALFYCMWMSDKRQVQEELSTNLASLIHRIPTPEL-ALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRESVALLRVQ--------------------------------------------DWDEALVEEFVTILSAEVVS--QLPNGLRLHLADLYLVEIYNAASNDLTTEAFVTLLEPFF-ALLGSEYDKTVFKRVRELVFEAMVTGYKFGPQAEKEVEEKXXXXXXXXXXXXDKVFENVELEQVQHHIFTLASADDTAERNRSALYTLYKRF 277
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: G4YJ53_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YJ53_PHYSP) HSP 1 Score: 133 bits (334), Expect = 2.370e-29 Identity = 97/284 (34.15%), Postives = 143/284 (50.35%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECF-----PEEKEGDEMEXXXXXXK-----KVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK PVQ EL+ NLA L+ + F SF TM R+W +D LR+DK+Y+LVR FVRE +A R+ EWD L+ ++ +EV++ P GLR+HLAD++ E A G+D+ TEAF+ + P+ + E + VFKR VFE +L F PE+++ D XXXXXX KVF+ V++ QVQ +F +A+A T E+ R LY L++++ Sbjct: 43 DKLWKALFYCMWMSDKRPVQEELSSNLAALVHKVPTAE-AALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLRVQ--------------------------------------------EWDEDLLQTFVTILSEEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFITLMEPFFTLLSG-EYDKTVFKRVRELVFEDMLTKFKFGPQPEKEQEDXXXXXXXXXXXXXXXKVFEQVDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 278
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: D0NGX9_PHYIT (Ribosomal RNA processing protein 1 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NGX9_PHYIT) HSP 1 Score: 131 bits (330), Expect = 3.430e-29 Identity = 97/282 (34.40%), Postives = 140/282 (49.65%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECFP----EEKEGDEMEXXXXXXK----KVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK PVQ EL+ NLAGL+ + F SF TM R+W +D LR+DK+Y+LVR FVRE + R +W+ LV ++ EV++ P GLR+HLAD++ E A G+D+ TEAF+ L P+ + E + VFKR VFE +L + EKE D+ XXXXXX KVF+ V++ QVQ +F +A+A T E+ R LY L++++ Sbjct: 43 DKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIPTAE-SALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVVLLR--------------------------------------------DQDWEEELVQEFVTILSTEVVS--QLPNGLRMHLADLYLTEIHNAAGKDVTTEAFMTLLEPFF-TLLNSEYDKTVFKRVRELVFEEMLTKYKFGAQPEKEKDQXXXXXXXXXXXXDKVFEQVDVAQVQHRIFAIASADDTAERNRAALYTLYKKF 276
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: A0A329RYE7_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RYE7_9STRA) HSP 1 Score: 131 bits (330), Expect = 6.830e-29 Identity = 96/281 (34.16%), Postives = 141/281 (50.18%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECFP----EEKEGDEMEXXXXXX---KKVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK PVQ EL+ NLAGL+ + F SF TM R+W +D LR+DK+Y+LVR FVRE +A R +W+ LV ++ EV++ P GLR+HLAD++ E A G+++ TEAF++ L P+ + E + VFKR VFE +L + EKE D+ XXXXXX KVF+ ++ QVQ +F +A+A T E+ R LY L++++ Sbjct: 43 DKLWKALFYCMWMSDKRPVQEELSTNLAGLVHRIPSAE-SALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRETVALLR--------------------------------------------DQDWEEDLVQEFVTILSTEVVS--QLPNGLRMHLADLYLTEIYNAAGKEVTTEAFMILLEPFFTLLSS-EYDKTVFKRVRELVFEDMLTKYKFGPQSEKEKDDXXXXXXXXXXXSKVFEQFDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 275
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Match: H3GJI2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GJI2_PHYRM) HSP 1 Score: 130 bits (327), Expect = 1.740e-28 Identity = 95/281 (33.81%), Postives = 143/281 (50.89%), Query Frame = 1 Query: 28 SQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGVRFFKSFCVTMQRDWERIDNLRIDKYYTLVRVFVREALAFCRLPTTAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVGAAAEWDLALVGAMSDVMEDEVLTLHPAPIGLRLHLADVWAEEACRAGGEDMPTEAFLVALAPWLRAAAHPETNAVVFKRTLGGVFEGLLECF-----PEEKEGDEMEXXXXXXK--KVFKNVEMDQVQACLFEVAAAPQTREKRRVKLYELHRRY 849 ++W+ L+YCM+M DK PVQ EL+ NLA L+ + + F SF TM R+W +D LR+DK+Y+LVR FVRE++A R+ +WD +V ++ EV++ P GLR+HLAD++ E A G+D+ TEAF+ L P+ + E + VFKR VFE +L + PE+++ XXXXXX KVF+ V++ QVQ +F +A+A T E+ R LY L++++ Sbjct: 43 DKLWKALFYCMWMSDKRPVQEELSSNLAALVHKVPEPE-AALEFVHSFFRTMHREWHGLDGLRLDKFYSLVRKFVRESVALLRVQ--------------------------------------------DWDEEIVQEFVTILSSEVVS--QLPNGLRMHLADLYLTEIYNAAGKDVTTEAFVTLLEPFFTLLSG-EYDKTVFKRVKELVFEDMLTKYKFGPQPEKEDXXXXXXXXXXXXXDKVFELVDVAQVQHRIFAIASADDTAERNRSALYTLYKKF 275 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12803.2255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12803.2255.1 >prot_L-elsbetiae_contig12803.2255.1 ID=prot_L-elsbetiae_contig12803.2255.1|Name=mRNA_L-elsbetiae_contig12803.2255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=569bp MTKIKHVFLSQIWRGLWYCMFMCDKAPVQRELAENLAGLLSLFKDDRWEGback to top mRNA from alignment at L-elsbetiae_contig12803:790..5037- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12803.2255.1 ID=mRNA_L-elsbetiae_contig12803.2255.1|Name=mRNA_L-elsbetiae_contig12803.2255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4248bp|location=Sequence derived from alignment at L-elsbetiae_contig12803:790..5037- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12803:790..5037- >mRNA_L-elsbetiae_contig12803.2255.1 ID=mRNA_L-elsbetiae_contig12803.2255.1|Name=mRNA_L-elsbetiae_contig12803.2255.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3414bp|location=Sequence derived from alignment at L-elsbetiae_contig12803:790..5037- (Laminarionema elsbetiae ELsaHSoW15)back to top |