mRNA_L-elsbetiae_contig12759.2215.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: D8LQA2_ECTSI (Cationic amino acid transporter-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQA2_ECTSI) HSP 1 Score: 407 bits (1046), Expect = 6.480e-136 Identity = 211/255 (82.75%), Postives = 225/255 (88.24%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALGGGTGSTEMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAPMGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 AGPA +VSW+LAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAI+TAWCLTLEFGISGAAVAR WADK+ EWV LG T S W++ LDPFP + GISPLAGLLQAACV+VLLRGVEM KRVTTVMTAIKMAVC FIIVGGL LF P N++PFAPMGV+GVIRGSSAAFFGYLGYDEVCALAGESINPR+DVPLAIAY L IV+ TYVLSALALSGMVP DGS SSFVLAFAARGW WACQ+ Sbjct: 80 AGPAAVVSWVLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIVTAWCLTLEFGISGAAVARAWADKIVEWVTLGAKTESR-----WIWLLDPFPGL--GISPLAGLLQAACVVVLLRGVEMSKRVTTVMTAIKMAVCIFIIVGGLALFDPGNMLPFAPMGVAGVIRGSSAAFFGYLGYDEVCALAGESINPRRDVPLAIAYTLAIVAATYVLSALALSGMVPVDGSAASSSFVLAFAARGWHWACQI 327
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A7R9UE61_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE61_9STRA) HSP 1 Score: 225 bits (573), Expect = 1.740e-66 Identity = 119/255 (46.67%), Postives = 160/255 (62.75%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALG---GGTGSTEMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAPMGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWA 756 AGPA ++SWL AG GCV SG++YAE+SS +PS G +YAY +VALGELPA++ WCLTLE+GIS +A+AR W DK+ W+ G G H G++PLA + C +LL GV +GK VT T +KM + AF+I+GGL LF DNL PFAP G G++RG+++AFFGY+GYD VC L E+ NP +++PLA+ ++ V+V L+A AL M P + S F AF + G WA Sbjct: 82 AGPAVVLSWLTAGFGCVLSGMNYAEMSSRVPSAGSSYAYTYVALGELPAVVAGWCLTLEYGISASAIARSWGDKMINWITTDLDLDGKGLRPGH---------------GVNPLAAAMVMTCTGILLGGVGVGKNVTNFFTGLKMLLVAFMIIGGLSLFDADNLTPFAPNGFPGIMRGATSAFFGYIGYDTVCCLGMEAKNPSRNLPLAVGGSIVGVTVLQCLAAFALVSMQPFEDIDVDSGFPEAFGSNGLVWA 321
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A7S2PKQ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PKQ0_9STRA) HSP 1 Score: 222 bits (565), Expect = 1.460e-65 Identity = 120/260 (46.15%), Postives = 170/260 (65.38%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALG---GGTGSTEMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAP--MGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 AGPA +SWL+AGI + SG YAEL+ IP+ G +YAYA++++GELPA+I A CLTLE+ +S AAVAR W DKV EW+ GS F + LDP ++P+A L+ AA +LL GV+ K VT T++K+ + F+ +GGL+L +P NL PF P +G++GV RG++++FFGY+GYDEVC LAGE+INPR ++P AI ++ +++ Y+ +AL L+GM P + S F AF A G WA Q+ Sbjct: 19 AGPATCLSWLIAGIASILSGACYAELAGRIPASGSSYAYAYISMGELPAVIAAACLTLEYLVSSAAVARSWGDKVVEWLVSDIHLDADGSDSTSSFVLSILDPGYA----LNPMAFLVSAASTALLLSGVKESKSVTNFFTSVKVILVVFMGLGGLVLLKPANLKPFIPPELGIAGVFRGATSSFFGYIGYDEVCCLAGEAINPRVNLPRAIMIVITLITALYIFAALMLTGMEPYYEISETSGFPEAFRANGVNWAAQL 274
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A8J9S9B2_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S9B2_PHATR) HSP 1 Score: 211 bits (536), Expect = 5.070e-63 Identity = 117/256 (45.70%), Postives = 162/256 (63.28%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALGGGTGSTEMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNL-VPFAPMGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 AGP +S+ +AGI SG+ YAELS+ IP+ G TY YA+V LGE+ A++ A CLTLE+G++GAAVAR W DKV W+ G W G++ A ++ L+LL GV+ K V+ V+T++KMA+ AF+ +GG +L+Q N+ P AP GV GV+RG++ +FFGYLGYDEVC +AGE+++P +D+P A+ + IV+V YVLSALAL+GMV S F AFA R WA Q+ Sbjct: 35 AGPLTFLSFAIAGIAACCSGVCYAELSARIPAAGSTYVYAYVCLGEVAAVVAAACLTLEYGVAGAAVARSWGDKVVLWMQTSFGVSVASWMMPW------------GVNLPAAVVSLGSTLLLLAGVQESKNVSNVITSLKMAIVAFMTIGGFILYQKVNMQAPLAPFGVDGVLRGATTSFFGYLGYDEVCVVAGEALHPARDMPRAVLGTISIVTVFYVLSALALTGMVHYSDISPTSGFPEAFATRHVMWASQL 278
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A7S4V2K1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V2K1_9STRA) HSP 1 Score: 214 bits (544), Expect = 4.510e-62 Identity = 117/258 (45.35%), Postives = 157/258 (60.85%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPS-EGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALGGGTGSTEMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAP--MGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 AGPA +SW+++G SGL YAE+S P+ EG +Y Y +GE ++ CLTLE+G+SGAAVAR W DK + W+ G + M W D VF A L+ V +L GV+ K+VT VMTA+K+ + F+IV GL L NL PF P +G++GV RG++++FFGYLGYDEVC +AGE+INPR+D+P A+ Y L I+SV YV++A L GM P + S F AF GWGWA Q+ Sbjct: 117 AGPATCLSWIISGFAACLSGLCYAEMSCAFPAQEGSSYVYTKHTMGEWFGVMAGACLTLEYGMSGAAVARSWGDKAARWLHTDLGVDNNSMGWTWFLTSDLGSDVF------ACLISVVTVALLAGGVKESKQVTNVMTALKIVLVVFMIVAGLFLMDTSNLTPFVPPELGMAGVARGATSSFFGYLGYDEVCCVAGEAINPRRDIPRAVLYTLSILSVLYVVAAFVLVGMQPWEEISAESGFPEAFRYNGWGWAAQI 368
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A7S2IG81_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IG81_9STRA) HSP 1 Score: 214 bits (546), Expect = 3.010e-61 Identity = 119/263 (45.25%), Postives = 172/263 (65.40%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWV-----ALGGGTGSTEMHRFWMFA-LDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAP--MGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 AGP+ +SW+++G SGL YAELS++ P+ G +YAYA+V +GELPA++ A CLTLE+ S +AVAR W DK+ E+ + G R W+ L+P Q G I+P+A L+ VL+LL GV+ K VT + T IK+A+ +F+ + G +LFQ +N+ PF P G+SG+ RG++++FFGY+GYDE+C LAGE+ NP ++P +I L+IV+V YV +ALAL+GMVP + + SSF AF RGW Q+ Sbjct: 156 AGPSTCLSWIISGAAACCSGLCYAELSALFPTAGSSYAYAYVTMGELPAVVAAACLTLEYVFSASAVARSWGDKIVEYYMQEYRSSGAAVEXXXXERDWIVTMLEPGGQN-GYINPMAFLVSFLSVLLLLNGVKESKFVTNLFTTIKIALVSFLCIAGFLLFQKENIQPFIPAKFGLSGIFRGATSSFFGYIGYDEICCLAGEAQNPSVNLPRSILASLVIVTVLYVAAALALTGMVPWEYISETSSFPDAFRYRGWELCAQI 417
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A7S4J7E7_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J7E7_9STRA) HSP 1 Score: 212 bits (539), Expect = 4.220e-61 Identity = 113/258 (43.80%), Postives = 166/258 (64.34%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALGGGTGST-EMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAP--MGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 AGPA ++SW +AG+ FSGL YAEL+ P+ G +YAY++V++GELPA+I CLTLE+ S +AVAR W DK+ E++ + T E+ + LDP G +P+A L+ AA V +LL+GV+ K+VT + T IKM + F+ G L L P NL P P G SG+ RG++++FFGY+G+DE+C ++GE+ NP K++P A+ LLIV+ Y+ +A+AL+GMVP + S+F F RGW A ++ Sbjct: 97 AGPATVISWAIAGVAACFSGLCYAELAGKYPTAGSSYAYSYVSMGELPAVIAGACLTLEYIFSASAVARSWGDKIVEYIRVNSLTWENQELWNSVLKVLDPGL----GFNPMAFLVSAASVTLLLKGVKESKKVTNIFTVIKMCLVLFMAFGSLYLLNPSNLSPLVPPQFGASGIFRGATSSFFGYIGFDEICCMSGEAKNPSKNLPRAVIASLLIVTSLYMFAAVALTGMVPYEDISSTSAFPDGFRYRGWEVAAEI 350
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A067BUM9_SAPPC (AA_permease_C domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BUM9_SAPPC) HSP 1 Score: 210 bits (535), Expect = 7.350e-61 Identity = 117/268 (43.66%), Postives = 158/268 (58.96%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALGGGTGSTEMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAP------------MGVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSP-DGSSFVLAFAARGWGWACQV 765 AG A +SWL+AG C+ +G +Y E+SS++PS G TYAY++ LGELPA++ W LTLE+GI A VAR WADKV EWV G GST + W+ S L L A CV ++L G++ GK V+T IK++V FII+ G + QP+N PF P GV GV+ G+S AFFGY G+DEVC +A E+ NPRK VP A+ ++L ++LALSGM+P D +P +G F F +G+ WA + Sbjct: 59 AGAAAFLSWLIAGFSCILNGFAYMEMSSLVPSSGSTYAYSYYGLGELPAVVAGWLLTLEYGICSAGVARSWADKVHEWVKEGLPEGSTSAN--WLNDSHA--------SFLGALCMAVCVAIVLVGIKFGKHFINVVTTIKVSVVLFIIIVGFIATQPENFTPFVPPVVPATADSAAQFGVQGVMLGASQAFFGYTGFDEVCCMAAEAKNPRKTVPRAVIGVILGTMFLSSFASLALSGMMPYDANPPNGFYFSAGFQYQGYNWAGTI 316
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A7S2ER43_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ER43_9STRA) HSP 1 Score: 211 bits (538), Expect = 2.430e-60 Identity = 114/257 (44.36%), Postives = 160/257 (62.26%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALGGGTGSTEMHRFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAPM--GVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 +GPA +SWL++G SGL YAEL SI P+ G +YAYA+V +GELPA++ A CLTLE+ S +AVAR W DK+ E+ L P G ++P+A L+ A VL+LL GV+ K VT + T IK+ + F+ + GL+LF N+ PF P+ G+ G++RG++++FFGY+GYDE+C LAGE+ NP ++P AI Y L IV+ YV++A L+GMVP + S F AF RGW A Q+ Sbjct: 156 SGPATCISWLISGAAACCSGLCYAELGSIFPTAGSSYAYAYVTMGELPAVVAAACLTLEYVFSASAVARSWGDKIVEYYLQEHPDNDGTQGYVMQVLLQP-GGTNGHVNPMAFLISALSVLLLLNGVKESKFVTNLFTGIKLVLICFLCIAGLLLFNASNITPFIPVQFGLPGILRGATSSFFGYIGYDEICCLAGEATNPSYNLPRAILYSLGIVTALYVMAAFVLTGMVPYEEISPTSGFPDAFRYRGWEVAAQI 411
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Match: A0A7S4RXA7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RXA7_9STRA) HSP 1 Score: 211 bits (536), Expect = 2.950e-60 Identity = 119/260 (45.77%), Postives = 168/260 (64.62%), Query Frame = 1 Query: 1 AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIITAWCLTLEFGISGAAVARVWADKVSEWVALGGGTGSTEMH--RFWMFALDPFPQVFGGISPLAGLLQAACVLVLLRGVEMGKRVTTVMTAIKMAVCAFIIVGGLMLFQPDNLVPFAPM---GVSGVIRGSSAAFFGYLGYDEVCALAGESINPRKDVPLAIAYILLIVSVTYVLSALALSGMVPADGSPDGSSFVLAFAARGWGWACQV 765 AGP+ +SW +AG SG YAELS IP G +Y YAFV++GELPA +T CL LEF +SG+AVAR W DKV EW+ + E+H + W++A + Q GI+P+A L+ + L+LL GV+ K +T + T IK+A+ F+ +GGL+L +NL PF P G +G++RG++ +FFGYLGYD +C +AGE+INP ++P A+ Y L+IV+ YV++ALAL+GM S F AFA+RG WA Q+ Sbjct: 163 AGPSTCLSWTMAGGAAFLSGCCYAELSGRIPHAGSSYVYAFVSMGELPAFLTGSCLVLEFLVSGSAVARSWGDKVVEWLTV-------ELHADKEWVYA---YLQPGYGINPMAFLVSCSTTLLLLGGVKESKMITDIFTWIKVALVLFMAIGGLLLLDTNNLQPFMPPELNGWNGIMRGATTSFFGYLGYDGICCVAGEAINPTVNLPKAVMYTLIIVTALYVVAALALTGMQNYTEISVESGFPEAFASRGVMWAAQL 412 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12759.2215.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12759.2215.1 >prot_L-elsbetiae_contig12759.2215.1 ID=prot_L-elsbetiae_contig12759.2215.1|Name=mRNA_L-elsbetiae_contig12759.2215.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp AGPAGIVSWLLAGIGCVFSGLSYAELSSIIPSEGGTYAYAFVALGELPAIback to top mRNA from alignment at L-elsbetiae_contig12759:359..4641+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12759.2215.1 ID=mRNA_L-elsbetiae_contig12759.2215.1|Name=mRNA_L-elsbetiae_contig12759.2215.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4283bp|location=Sequence derived from alignment at L-elsbetiae_contig12759:359..4641+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12759:359..4641+ >mRNA_L-elsbetiae_contig12759.2215.1 ID=mRNA_L-elsbetiae_contig12759.2215.1|Name=mRNA_L-elsbetiae_contig12759.2215.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1530bp|location=Sequence derived from alignment at L-elsbetiae_contig12759:359..4641+ (Laminarionema elsbetiae ELsaHSoW15)back to top |