mRNA_L-elsbetiae_contig12744.2204.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12744.2204.1
Unique NamemRNA_L-elsbetiae_contig12744.2204.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A6H5L474_9PHAE (J domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L474_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 1.190e-133
Identity = 209/252 (82.94%), Postives = 227/252 (90.08%), Query Frame = 1 
Query:    1 PLSFSLVSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLV-------ARYQEESSTTSQREGFTMCSLLFAPYEVSNVADTMNIAGLKGEEVPPIFHRLDLFQVTRRQLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAYAASEEAAETSARRGVPADGSFGAPVNVNQALKR 735
            P+   +  +GTVEKQQSVFFM+ VT+ MARDGLVLRC STNKSRFKLV       ARYQEESS+TS REGFTMCSL FAPYEVSNVADT+NIAGLKGEEVPPIFHRLDLFQ+T RQLE GDHLVGVYGDNWLRAASFSLMAIPLS RA+EE+ASVVSVDAQLV+QREQLKAFKPEYLEAKAKWEATLGKLEELT HTTELVRAREVVYDQLVGASLSAYAAS++AA ++ARRGVPA+GS G+ VNVN ALK+
Sbjct:  166 PMECGVEYKGTVEKQQSVFFMIHVTKDMARDGLVLRCTSTNKSRFKLVLFDNAGKARYQEESSSTSNREGFTMCSLFFAPYEVSNVADTINIAGLKGEEVPPIFHRLDLFQLTSRQLEEGDHLVGVYGDNWLRAASFSLMAIPLSPRAKEEEASVVSVDAQLVSQREQLKAFKPEYLEAKAKWEATLGKLEELTAHTTELVRAREVVYDQLVGASLSAYAASDQAAASAARRGVPANGSVGSAVNVNHALKK 417
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A835ZFM4_9STRA (Heat shock protein 40 like protein/ DnaJ domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFM4_9STRA)

HSP 1 Score: 174 bits (442), Expect = 3.970e-48
Identity = 102/221 (46.15%), Postives = 138/221 (62.44%), Query Frame = 1 
Query:    1 PLSFSLVSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVA-------RYQEESSTTSQREGFTMCSLLFAPYEVSNVADTMNIAGLKGEEVPPIFHRLDLFQVTRRQLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAE-EEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAYA 639
            PL   +   G V +QQ  FF + V+ ++A  GL LRC S NKSRFKLV        RYQEES+ +S+ + +T C+L F P+EV ++AD M +   + EE+PP+F+RLD F +TRR+LE GDHLV VYGDN+LR ASF+L A  +   A  E Q  +   DA ++ QR +L+AF+ EYL+A+  W  T  +L   T +T   V+ RE   D LVG SL A A
Sbjct:  150 PLKLGVSYSGNVNRQQGAFFFLRVSAEVADMGLALRCASHNKSRFKLVVFDAKGGVRYQEESAKSSRSDKYTTCTLFFTPFEVGSLADRMPLPNPE-EELPPVFNRLDTFHMTRRKLERGDHLVCVYGDNFLRGASFALSAAAIPPAAALEAQGRLREADAAILQQRSELRAFQMEYLQARKLWLETQERLAAHTENTAAAVQEREAAIDALVGLSLDACA 369
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: UPI000C75E764 (chaperone protein dnaJ 15-like isoform X1 n=3 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75E764)

HSP 1 Score: 104 bits (260), Expect = 3.320e-22
Identity = 66/210 (31.43%), Postives = 115/210 (54.76%), Query Frame = 1 
Query:   28 GTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVARYQEESST----TSQREGFTMCSLLFAPYEVSNVADTMNIAGLKG--EEVPPIFHRLDLFQVT-RRQLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAY 636
            GTVE+Q + FF ++VTE   ++G+++RC ST K +FK+V   QE   T    + Q +  +  +L   PY   ++ +TM ++ +K   E+VPP+F  LD +    +  L  G HL  VYGDNW ++  ++L  +       +   ++ + + +L  ++++L+ F+ E+ E K K++A   +LE      TELV++RE  Y +    S   Y
Sbjct:  151 GTVERQAAHFFRITVTEADLKNGVIIRCSSTGKDKFKIVFFDQEGHVTMVEESQQSKRASEANLYVVPYGRYHLMETMPLSMMKHLEEDVPPVFMILDTYDKDIKSNLLPGTHLFCVYGDNWFQSVRYTLRCLVAVHPEADCVKTIQTTEEKLALKKKELEQFQTEFCEVKKKYDAAKERLENDVKEITELVQSREGAYTEYADESALKY 360
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A1I8CET9_9BILA (J domain-containing protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CET9_9BILA)

HSP 1 Score: 104 bits (259), Expect = 5.210e-22
Identity = 58/214 (27.10%), Postives = 116/214 (54.21%), Query Frame = 1 
Query:   19 VSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVARYQE----ESSTTSQREGFTMCSLLFAPYEVSNVADTMNIAGL---KGEEVPPIFHRLDLFQVTRR-QLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAY 636
            V  G V KQ   F+   +T  + + G+V+R  ST+ S+FKL+   +E    +   + +R+ +T   L + P++  ++++ + +      K +++P  FH LD  +   +  ++ GDH++ VYGDNW++  ++ +  +PL+   +     +  +++ L ++++++  F+ EY++ K KWEA   KL+       E ++ RE VYD+L  A    Y
Sbjct:  171 VQDGVVAKQDGDFYKFKMTPDLEKHGVVIRVTSTSMSKFKLIIFDKEGGVRQIQESQKRKAYTSAELFYVPFKRVDISEFVPMKYYMEDKNKDIPIAFHYLDTLENQDQFPIKLGDHVICVYGDNWIQKVTYKVSFLPLNEGCKASVDEITGIESLLSSKKQEMSKFQNEYVDLKKKWEAAKAKLKAEDALIQENIKLREKVYDELYEACQRPY 384
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A158Q5P7_DRAME (J domain-containing protein n=1 Tax=Dracunculus medinensis TaxID=318479 RepID=A0A158Q5P7_DRAME)

HSP 1 Score: 98.6 bits (244), Expect = 4.760e-20
Identity = 61/211 (28.91%), Postives = 118/211 (55.92%), Query Frame = 1 
Query:   28 GTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVARYQEES----STTSQREGFTMCSLLFAPYEVSNVADTMNIAG-LKGEEVPPIFHRLDLFQ-VTRRQLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAEEEQA--SVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAY 636
            G+V KQ++ FF +++ E+  ++GL++ C S   S+FKLV   +E        +++R+G T  ++ F P++ +N+++ + +   ++ ++ P  FH LD  + V  +QL+A DH + VYGDNW++   F L  +PL+     +     +  V+  L+  ++++  F+ EY EA  K++    +L+  T     L++ R+  YD+L   S S +
Sbjct:  151 GSVAKQEAAFFKITMREEWQKNGLMIMCKSPQMSKFKLVLFDKEGGVRMIQESNKRKGCTAAAIYFVPFDRANLSEFIPMKFYMEDKDTPLSFHLLDTLETVGAQQLDARDHFLCVYGDNWIKDVRFQLRFLPLNDSLSSKNIIQDLTEVERSLLLAKKEMAQFQIEYTEAIRKYKEVNERLKTETETINGLLKKRDQDYDELERESASVF 361
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: W7TQS2_9STRA (Chaperone protein dnaj 16 n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQS2_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 8.400e-18
Identity = 64/221 (28.96%), Postives = 119/221 (53.85%), Query Frame = 1 
Query:   10 FSLVSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVA-------RYQEESSTTSQREGFTMCSLLFAPYEVSNVADTMNIAGLKGEEVPPIFHRLDLFQVTRRQLEAGDHLVGVYGDNWLRAASFSLMAI-----PLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAY 636
            FS+V  G    Q+  F+ + ++E  A +G+++ C S+++ RFKL+        RY +ESS   +++  T+  LL  P++      T     +K  + P +F RL++  +  R ++AG+HL+ VYGDNW   +S+++  +     PL  +   E      +D +L A++ +++  K +Y  A+A +EA   K++E +  T  LV+ RE  Y + + +S+  Y
Sbjct:  162 FSMV--GKTVAQRGNFYRLQLSEADAANGVIVSCCSSSQDRFKLICFEADGSVRYMQESSPHHEKKD-TVADLLLVPFQTITSYGTSENYEIKKTD-PLLFSRLNILTLEARSIQAGEHLLCVYGDNWYTGSSYTITIMRAHLDPLLVQTMRE------MDDKLYAKKGEIELLKEQYDRAEAAFEAIKAKVDEESKVTEALVQEREAAYSRFITSSVRNY 372
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A4D9D090_9STRA (J domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D090_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 2.140e-17
Identity = 64/221 (28.96%), Postives = 119/221 (53.85%), Query Frame = 1 
Query:   10 FSLVSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVA-------RYQEESSTTSQREGFTMCSLLFAPYEVSNVADTMNIAGLKGEEVPPIFHRLDLFQVTRRQLEAGDHLVGVYGDNWLRAASFSLMAI-----PLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAY 636
            FS+V  G    Q+  F+ + ++E  A +G+++ C S+++ RFKL+        RY +ESS   +++  T+  LL  P++      T     +K  + P +F RL++  +  R ++AG+HL+ VYGDNW   +S+++  +     PL  +   E      +D +L A++ +++  K +Y  A+A +EA   K++E +  T  LV+ RE  Y + + +S+  Y
Sbjct:  162 FSMV--GKTVAQRGNFYRLQLSEADAANGVIVSCCSSSQDRFKLLCFEADGSVRYMQESSPHHEKKD-TVADLLLVPFQTITSYGTSENYEIKKTD-PLLFSRLNILTLEARSIQAGEHLLCVYGDNWYTGSSYTITIMRAHLDPLLVQTMRE------MDDKLYAKKGEIERLKEQYDRAEAAFEAIKAKVDEESKVTEALVQEREAAYSRFITSSVRNY 372
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A183BS92_GLOPA (J domain-containing protein n=1 Tax=Globodera pallida TaxID=36090 RepID=A0A183BS92_GLOPA)

HSP 1 Score: 91.3 bits (225), Expect = 3.060e-17
Identity = 64/251 (25.50%), Postives = 124/251 (49.40%), Query Frame = 1 
Query:    1 PLSFSLVSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVARYQEES----STTSQREGFTMCSLLFAPYEVSNVADTMNIAG---------------LKGEEVPPIFHRLDLFQVTRR---QLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAYAASEEAAETSARRGVPA 687
            PL   +V   +V  Q++ F+   +T +  + G+++RC S   S+FKLV   QE +      + +++  T   L F P++  N+++ + I                 ++ ++ P  FH LD  +       +L+ G H++ VYGDN+LR  ++ +  +PL+S A      + +++  L +++ +++ F+ EY++ K KWEA   +L+      +  ++ RE  YD+L       Y  S+  A    + G+PA
Sbjct:  140 PLEPGVVVAASVNNQEANFYSFLMTPEFQQHGVLIRCKSPAMSKFKLVLFDQEGAVRHIRESQKKKKLTSAELFFVPFQRINLSEFIPIRCFEIVFLWIKSKLRFYMEDKDTPLPFHYLDTLETQGANVMELQPGQHILCVYGDNFLRMVNYEITFLPLNSYASSVVEKINALEPVLASKKLEMQEFQKEYMDLKRKWEAAKERLKLEEEEISGCLKTREKAYDELCDVCSKPYQQSQAVAS---KTGLPA 387
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A6A3BIX8_HIBSY (Chaperone protein dnaJ 16 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3BIX8_HIBSY)

HSP 1 Score: 85.1 bits (209), Expect = 3.650e-15
Identity = 60/183 (32.79%), Postives = 97/183 (53.01%), Query Frame = 1 
Query:    1 PLSFSLVSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVARYQEESS-------TTSQREG-FTMCSLLFAPYEVSNVADTMNIAGLKGEEVPPIFHRLDLFQVTR-RQLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKA 522
            PL         VEKQ + F+ V +TE+ ARDGLV R  S +KS+FK++  Y EE+          S + G  T   + F  + V  +  T+N      +     F +LD FQ     +L+ G H   VYGDN+ R+ S+++ AI  +   EE++ ++ +V+A+++++R +L  F+ EY E  A
Sbjct:  143 PLLLGQPVSRKVEKQCAHFYSVKITEEEARDGLVCRVQSPDKSKFKILYFYLEENGGLSLALKEDSAKTGKVTSAGMYFLGFPVYRLDQTVNSVAASKDPDAAFFKKLDGFQPCEVTELKPGTHFFAVYGDNFFRSVSYTIEAICTAPFVEEKE-NLRAVEAEILSKRVELSKFETEYREVLA 324
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BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Match: A0A1I8BVY4_MELHA (J domain-containing protein n=4 Tax=Meloidogyne TaxID=189290 RepID=A0A1I8BVY4_MELHA)

HSP 1 Score: 82.4 bits (202), Expect = 2.540e-14
Identity = 55/213 (25.82%), Postives = 114/213 (53.52%), Query Frame = 1 
Query:   28 GTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVARYQE----ESSTTSQREGFTMCSLLFAPYEVSNVADTMNIAGL-KGEEVPPIFHRLDLFQVTRRQLEA---GDHLVGVYGDNWLRAASFSL--MAIPLSSRAEEEQASVVSVDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVVYDQLVGASLSAY 636
             ++  Q++ F+   ++    + G+++RC S +KS+FKLV   ++    +   + +R+  T   L F P++  ++++   +  L + +E P  FH LD  +     L      ++++ VYGDN+L    + +  + +P++ +A     ++  ++  L  ++++++ F+ EY+E K KWEA   KL++     T L++ARE  YD+L  A +  Y
Sbjct:  141 NSMSNQEAHFYKFDMSND-CKHGVIIRCKSHSKSKFKLVLFDKDGGVRDIKESQKRKHCTSAELFFLPFQRIDISEFSPMHHLMEDKETPLPFHYLDALETQGANLSELIQPNYILCVYGDNFLSQVKYKITFLPVPVNEQANLAIENIKQLEPVLQNKKQEMQQFQKEYMELKTKWEAAKAKLKKEDEDITNLLKAREEGYDRLFDACMLPY 352
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12744.2204.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5L474_9PHAE1.190e-13382.94J domain-containing protein n=2 Tax=Ectocarpus Tax... [more]
A0A835ZFM4_9STRA3.970e-4846.15Heat shock protein 40 like protein/ DnaJ domain-co... [more]
UPI000C75E7643.320e-2231.43chaperone protein dnaJ 15-like isoform X1 n=3 Tax=... [more]
A0A1I8CET9_9BILA5.210e-2227.10J domain-containing protein n=1 Tax=Rhabditophanes... [more]
A0A158Q5P7_DRAME4.760e-2028.91J domain-containing protein n=1 Tax=Dracunculus me... [more]
W7TQS2_9STRA8.400e-1828.96Chaperone protein dnaj 16 n=3 Tax=Nannochloropsis ... [more]
A0A4D9D090_9STRA2.140e-1728.96J domain-containing protein n=2 Tax=Monodopsidacea... [more]
A0A183BS92_GLOPA3.060e-1725.50J domain-containing protein n=1 Tax=Globodera pall... [more]
A0A6A3BIX8_HIBSY3.650e-1532.79Chaperone protein dnaJ 16 n=1 Tax=Hibiscus syriacu... [more]
A0A1I8BVY4_MELHA2.540e-1425.82J domain-containing protein n=4 Tax=Meloidogyne Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12744contigL-elsbetiae_contig12744:163..5315 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score399.1
Seed ortholog evalue1.7e-108
Seed eggNOG ortholog2880.D8LLG4
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0005488,GO:0005515,GO:0008092,GO:0008150,GO:0009605,GO:0009606,GO:0009628,GO:0009629,GO:0009630,GO:0009719,GO:0009725,GO:0009737,GO:0009958,GO:0010033,GO:0033993,GO:0042221,GO:0050896,GO:0097305,GO:1901700
EggNOG free text desc.protein folding
EggNOG OGsCOG0484@1,KOG0713@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionHeat shock protein 40 like protein/ DnaJ domain containing protein
Ec32 orthologEc-27_002540.1
Exons6
Model size831
Cds size831
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12744.2204.1prot_L-elsbetiae_contig12744.2204.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12744 163..5315 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815462.3337889-CDS-L-elsbetiae_contig12744:162..3061622815462.3337889-CDS-L-elsbetiae_contig12744:162..306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 163..306 +
1691682909.4328628-CDS-L-elsbetiae_contig12744:162..3061691682909.4328628-CDS-L-elsbetiae_contig12744:162..306Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 163..306 +
1622815462.3466156-CDS-L-elsbetiae_contig12744:1025..11061622815462.3466156-CDS-L-elsbetiae_contig12744:1025..1106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 1026..1106 +
1691682909.4447947-CDS-L-elsbetiae_contig12744:1025..11061691682909.4447947-CDS-L-elsbetiae_contig12744:1025..1106Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 1026..1106 +
1622815462.3588333-CDS-L-elsbetiae_contig12744:1546..16411622815462.3588333-CDS-L-elsbetiae_contig12744:1546..1641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 1547..1641 +
1691682909.4530363-CDS-L-elsbetiae_contig12744:1546..16411691682909.4530363-CDS-L-elsbetiae_contig12744:1546..1641Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 1547..1641 +
1622815462.3726258-CDS-L-elsbetiae_contig12744:2326..25041622815462.3726258-CDS-L-elsbetiae_contig12744:2326..2504Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 2327..2504 +
1691682909.4607935-CDS-L-elsbetiae_contig12744:2326..25041691682909.4607935-CDS-L-elsbetiae_contig12744:2326..2504Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 2327..2504 +
1622815462.3844614-CDS-L-elsbetiae_contig12744:4059..42321622815462.3844614-CDS-L-elsbetiae_contig12744:4059..4232Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 4060..4232 +
1691682909.4687836-CDS-L-elsbetiae_contig12744:4059..42321691682909.4687836-CDS-L-elsbetiae_contig12744:4059..4232Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 4060..4232 +
1622815462.3969035-CDS-L-elsbetiae_contig12744:5155..53151622815462.3969035-CDS-L-elsbetiae_contig12744:5155..5315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 5156..5315 +
1691682909.4768674-CDS-L-elsbetiae_contig12744:5155..53151691682909.4768674-CDS-L-elsbetiae_contig12744:5155..5315Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12744 5156..5315 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12744.2204.1

>prot_L-elsbetiae_contig12744.2204.1 ID=prot_L-elsbetiae_contig12744.2204.1|Name=mRNA_L-elsbetiae_contig12744.2204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=277bp
PLSFSLVSQGTVEKQQSVFFMVSVTEKMARDGLVLRCMSTNKSRFKLVAR
YQEESSTTSQREGFTMCSLLFAPYEVSNVADTMNIAGLKGEEVPPIFHRL
DLFQVTRRQLEAGDHLVGVYGDNWLRAASFSLMAIPLSSRAEEEQASVVS
VDAQLVAQREQLKAFKPEYLEAKAKWEATLGKLEELTTHTTELVRAREVV
YDQLVGASLSAYAASEEAAETSARRGVPADGSFGAPVNVNQALKRRKAGR
SASGSASGSGSGGGGGSGGGLFGRLF*
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mRNA from alignment at L-elsbetiae_contig12744:163..5315+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12744.2204.1 ID=mRNA_L-elsbetiae_contig12744.2204.1|Name=mRNA_L-elsbetiae_contig12744.2204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5153bp|location=Sequence derived from alignment at L-elsbetiae_contig12744:163..5315+ (Laminarionema elsbetiae ELsaHSoW15)
CCTCTGTCCTTTTCCCTTGTCTCTCAGGGCACGGTGGAGAAGCAGCAGAG
CGTGTTCTTCATGGTCAGCGTCACGGAGAAAATGGCAAGAGACGGCCTGG
TGCTGCGATGTATGTCCACCAACAAGAGCCGGTTCAAGCTCGTGGTGAGC
TCAAAACATTTTCAGCCGGCAATTTTGTCTTGTACATACATACATACCTG
CATAACTGCATACTATATGAAGCTATGTACTCCCTCTGACCGGCAATATA
AGGCCGGTTCGGACACTTGGCAAAATAAATCGAGTTGGCGGTGAATGTTT
GAGCTGGGAGTTCGATCCTCACCTCAGACACTTGTTTTTCTTAAAAAAAA
ACACTTTTGTTTTTCAAATTTGTTTTCTTTGTGCTCTCTTTTTCGCTTCA
AAGGTTCCGTTTTTAAGCACCCTGTAGTTAAAGCTCCGTGAAAATGCGTG
CGCTACATACCGTAGGTGACACAAGATACCACACCCCCTGGACCGACTTT
TAAAGCTCCATTACTCCGTAACGAAGAGGGTGCCAGCACCAAATGACACG
TTTTCGGAAAGCCCTCGACTAGATCTTTCCAACGCCACCCCCTTTTGGCA
CTGGCACTCTTCTTGCTGAGGAGGAATCGAGCTGTGAAAATCTGTCCAGG
AGGTGTGGTATCTTGTGTCACCTAGGGTATGTTATGTACTTTAGGAGAGG
GTAATTTTCCTCCTGCGGTGTTTCATGCATACCCGGCACGTAATACTTCG
AGGTAAACCTTCTTCGTGTGTCCTTCACCTTGCCCCCCCCCCCCCCCCCC
CCCGACGTACTTACCCCCTCTTTTCCCCCCCCCCCCCCCCCCCCCCCCCC
CGACGCCGGCAAGGCACGGTATCAGGAGGAGAGCAGCACCACCTCCCAAC
GCGAGGGTTTCACCATGTGCTCGCTTCTCTTTGCACCGTATGAGGTGCGG
GCAAGCTTTCGTGCTCTCTCTCGTATGTTTGCCTTCGTTCATGTTTTTCA
TGGTTATACTACTCCATAATTTATTGTTGATGTATGATGAATTCCCTCGT
CTCAGTTTTGTTGGTCGAGCTAAATCGCACGGTGTTTCGACAGCAGCGCG
TCGGAAATGATGATCCGTTTGTTTGCGACTTCGGTTTTATTTTCGGTTTG
GTGCTTCCTACTGCTGTTCGCCTTTTTGTTCAATGTATATAACTTGTTAC
TCTTCTCTCTCTCCTGTTTTTGTCTCTCGTGTGGGTTCGGGGCCTGTTAC
GTTCATCTGTGCATCTATCTACACATAGCATGCTCTTGCATATGTTTGTG
TGTATGTGTGTGTGACTAAACTTATGCGCGATGTGGGATCCGCGATTTGC
GATTTTTGTTTTTTTAATTGCGTGAGCTATTTAGGTGAGCAACGTGGCGG
ACACAATGAATATCGCGGGCTTGAAGGGGGAGGAGGTGCCGCCAATTTTC
CACCGCTTGGACCTCTTCCAGGTCACCAGGTGAGAAGACAAGACAAGAGA
AGAAACCCAAAGCGATGGGCCGTAGAGACAGAGGGAGAGCAGAGAGAGAG
GGGGGGGGGGGGGAGCGAGGGAGGGAGAGAGGAAGAGGAAAGGAGGGGGG
GGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGAGCGAGGGAGCGAGAGA
GAGAGAGAGAGAGAGAGAGAGTAGAGAGAGAGGGGGGGGAGGGCGAGAGA
CAGACAGACAAGAGAGACAGACAGAAAGACAGACACACACAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGAGGAAGATAGGAGAGAAACGAAGGAC
TTGCCTGTATTGTGCGTGTGTTTTTGTATTTGTTCTTTAGCGTGGATTGC
GCTACACAAATAGTGTAATAGTGTATCGGGCCGACCGATGAAAAAGGTGT
GGTCTGTCTGTGTGTGCGCATCATGCCCATTGTGTGTGTCCAGTGTTTAT
TGATTTAGTTTTGCATTTTTGAGAACGAACCCATACACCCCGGTGCGTAC
ACGCGCAAAAACATACCATGCAATAGGTCCAAATCTAGGCAGCTCCGCTC
TCACGCACTGCAGTTGCTCCTGCACTTGCTGCTCGTTCCTTCGATCGATA
CATCAAACCATGTCGTATGTGTGTCCATAAATGCATGCATATGTATGCGT
GTACTTAAAAAAAGGCGACAATTGGAGGCGGGTGACCACCTCGTGGGCGT
GTACGGGGACAACTGGCTGAGGGCGGCCTCGTTCAGCCTGATGGCGATAC
CGCTGAGCTCGAGGGCTGAGGAGGAGCAGGCCTCCGTCGTCAGCGTGGAC
GCTCAGCTCGTGGCGCAGAGAGAGCAGCTCAAGGCCTTCAAGGTGTGTGT
GTGTGGCAGTGATGAGATTAGTGCTGGGAATGGTGTTTGTGACGGTGGTG
TGGTAGTAGTGATGGGGAACGGCGTGATGGTCTGATAATGAAGTAGTAGA
ATGAACGATGGGAATGGTATTGCGATGATGTGGTATGTTGTGGGGATGAG
TGATGTGGTTTGTATGATGTGATGATTTGGTGTAAGGTGGAGGAGCGGAG
GAGCGAATGGGTGTGGGTGGATCGCATTTTATTTCACTTTTTACGGTTCG
ATGTCAGCGATGACTTCACCACACAAAACAAGATATTCTTGGTTGTTCCT
CCTCGTGGAGGCATTCTGAAACTGCAATCATCGATGGCTTTTTTCCAAAC
ATGCCCGGGTATTATGTTTCACACCTCATGTATTGTACTCTCTTCTTTAA
TCTGGGTTAACGCGCTTACGTTCACTGCTGTATGTATGCACACTGGGGTA
GACGAAGAGATGGCATGAATGGCGTGGTGGATAGATTCGGGTTGTACGGA
ACGGATATTTTGGTTGTTTGAGGACTCGTTTTGGGATTTGCCATGTATGT
GCCAGCTGCCGCTTGATGGTCTCGGGTGATGTGGGGAGACGAAGGCGAAA
GGTGAAAGACGTTTTTTATCGCGATGTGATAAAATATGAACAACACAGGT
GGGGAAGACGGGGTCGTGGTTTTGATGCCTACAGTCACCCCGCGCCTAGT
TTCTGTGTGCCTTCCATGTCTATACCAGTTTTGGGGACACTGGGTCCATC
AGATCAGGTAATGGCAATCAACAAGCCGCGTGACTGAGACTGATTCAACG
CGAAATTACATGATCGAATGATCTTTACAATAACCTGCGCCAACGACGCT
TCCCGATGGTCTTGTACAAAGTCCATCAGCGCTCCTTTTCTGCCACGTAT
GCAGAAGCAGGCTAAATGGTCTCGTGCCCCTATAATAGCTGGAGACCTCA
CCTCGCCCTTGGCTGCTAAGACGCTACATACACCACTTCGCTTTGAGCGC
CCTCTCGCCGCCCGACCAACGCTACGCACTGCTGCGCTGCGCTTCGATGT
TCTTTCTCCCTCTGCCTTCGCGAGTGCTGTCGTCTCCCCCCTCAATCTCT
GTTGGTGGGGAGCGTTTACCTCTCCGTCCCCTCCCCGGTCTTTGTCGCCG
CCACCTCCCCACCTCACTCTGTCCTCTCCTCCATGCGTCCGGCGCTCTGG
CGTTAACTCCGTCGTATAGAGTAAAACCGCCAATTAAGAGACACTGGTGG
GCGATTTACTCTTACCTCGTCTGTGAATGCTCTGATCGGCACGCTGAAGT
GCTCAAACGAAAGCCACCGGCAGGCTGCCAAAAAAAGAAAAGAAAAAAAG
GGGGGCCTCCGCGGATTGTGTGCGGAGATATATTTCCAATTTGAAAAAGT
GTCTCTTGATAGGCAGGTGTCTCTTAATTGATGGTTTTACTCTAGGCTTA
TTCGTGTCGAACCTTTTCTTCTCTCTCGTTCGTAACTCTCTTTTTTTTCG
TCTTTTTCTTTCTTTCGCTTTTTTTTTATCTTTGTACATGATGCCAGCCC
GAGTACCTGGAGGCAAAGGCAAAGTGGGAGGCAACACTCGGCAAGCTGGA
GGAGCTGACGACCCACACGACGGAGCTGGTGAGGGCGAGGGAAGTGGTCT
ACGACCAGCTGGTGGGGGCGTCTCTGTCTGCGTACGCGGCGTCAGAAGAG
GCAGCCGAAACGTCCGCAAGGTGAAAAAACGAAATATGCTTGGAAGTTTT
TTCATAGTTTCAACTGAAAAACAAATGCGGCATGATTCAGCAATAAAAAT
CAGAAATTTAGGACGGACACACACTGTTAGCGGCCCGTGCAAATTGAGGT
GGTATGTACCCTACTTAAATCTGGCGCAGAGTACATACATACGTAGGAAG
AAACTCTTATATGTACATACATATGTGCATCCTCGATCTTTCTGCCCCCC
TTCCCATCAGTTCTGAACGGCCGGCCAGCCTACCTACTTTTGGGGATATT
TTGCGTATTACATACACTACAGCCGCGATTCAGGTCGCACAAAGAGTGCC
TCCGGGCTCTGTTGTTTTTTGGCAACCATACATATCCTTCCTATTTATGA
GTTTTCGCAAAACGTGTAGTACGAAAGTATGTATGTATGTTATGAACACG
ATCTTGTTATGAACACGATCTTGGGGTGTTTTTTTATTGCATTCTACTCC
ATGGCTTTGCTCAATGTTTTCGGCTGCTTCTCGCAAATGTACACTCGTGA
GGTTGGGGGCGATGTTCGATATACCGTGTATGTGACTTAGATAGTAGACC
AGGATCGTCCGCAGGGCATGTGAAACGGGGAACTCAACGGCGGTAGTGTT
TATATCTTTATATCTTTCATCGTCGTCCTTTCTTCATTGCGCCACTCTGA
GACAAGAGCAAGTGACTGCTTTGTGTTTTGTAGGTGCGCGTATGTATGTT
ACAGCTAGCTTTCGAGGCTGGTTTTGAGACTTTTCGTGTATGTAACCCTG
CGATTACATAGACACAGGTTGCCGCCGCATGGTGTCGTCATCGGCACAGC
CACGAAGAGTTCCCCGCATTCTCTCCCCCCCCCCCCTCCCCCCTCCTCCC
TCATCGCCCTTCTCCCTGTTCCCCCTGACTCCCTATGTAAAAGGCGAGGC
GTGCCGGCGGACGGCTCGTTTGGGGCCCCGGTCAACGTGAACCAGGCATT
GAAAAGGAGGAAAGCGGGGAGATCAGCATCAGGATCGGCATCGGGATCGG
GATCAGGCGGGGGTGGAGGGAGCGGGGGAGGGCTCTTTGGGCGCCTGTTT
TGA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12744:163..5315+

>mRNA_L-elsbetiae_contig12744.2204.1 ID=mRNA_L-elsbetiae_contig12744.2204.1|Name=mRNA_L-elsbetiae_contig12744.2204.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1662bp|location=Sequence derived from alignment at L-elsbetiae_contig12744:163..5315+ (Laminarionema elsbetiae ELsaHSoW15)
CCTCTGTCCTTTTCCCTTGTCTCTCAGGGCACGGTGGAGAAGCAGCAGAG
CGTGTTCTTCATGGTCAGCGTCACGGAGAAAATGGCAAGAGACGGCCTGG
TGCTGCGATGTATGTCCACCAACAAGAGCCGGTTCAAGCTCGTGCCTCTG
TCCTTTTCCCTTGTCTCTCAGGGCACGGTGGAGAAGCAGCAGAGCGTGTT
CTTCATGGTCAGCGTCACGGAGAAAATGGCAAGAGACGGCCTGGTGCTGC
GATGTATGTCCACCAACAAGAGCCGGTTCAAGCTCGTGGCACGGTATCAG
GAGGAGAGCAGCACCACCTCCCAACGCGAGGGTTTCACCATGTGCTCGCT
TCTCTTTGCACCGTATGAGGCACGGTATCAGGAGGAGAGCAGCACCACCT
CCCAACGCGAGGGTTTCACCATGTGCTCGCTTCTCTTTGCACCGTATGAG
GTGAGCAACGTGGCGGACACAATGAATATCGCGGGCTTGAAGGGGGAGGA
GGTGCCGCCAATTTTCCACCGCTTGGACCTCTTCCAGGTCACCAGGTGAG
CAACGTGGCGGACACAATGAATATCGCGGGCTTGAAGGGGGAGGAGGTGC
CGCCAATTTTCCACCGCTTGGACCTCTTCCAGGTCACCAGGCGACAATTG
GAGGCGGGTGACCACCTCGTGGGCGTGTACGGGGACAACTGGCTGAGGGC
GGCCTCGTTCAGCCTGATGGCGATACCGCTGAGCTCGAGGGCTGAGGAGG
AGCAGGCCTCCGTCGTCAGCGTGGACGCTCAGCTCGTGGCGCAGAGAGAG
CAGCTCAAGGCCTTCAAGGCGACAATTGGAGGCGGGTGACCACCTCGTGG
GCGTGTACGGGGACAACTGGCTGAGGGCGGCCTCGTTCAGCCTGATGGCG
ATACCGCTGAGCTCGAGGGCTGAGGAGGAGCAGGCCTCCGTCGTCAGCGT
GGACGCTCAGCTCGTGGCGCAGAGAGAGCAGCTCAAGGCCTTCAAGCCCG
AGTACCTGGAGGCAAAGGCAAAGTGGGAGGCAACACTCGGCAAGCTGGAG
GAGCTGACGACCCACACGACGGAGCTGGTGAGGGCGAGGGAAGTGGTCTA
CGACCAGCTGGTGGGGGCGTCTCTGTCTGCGTACGCGGCGTCAGAAGAGG
CAGCCGAAACGTCCGCAAGCCCGAGTACCTGGAGGCAAAGGCAAAGTGGG
AGGCAACACTCGGCAAGCTGGAGGAGCTGACGACCCACACGACGGAGCTG
GTGAGGGCGAGGGAAGTGGTCTACGACCAGCTGGTGGGGGCGTCTCTGTC
TGCGTACGCGGCGTCAGAAGAGGCAGCCGAAACGTCCGCAAGGCGAGGCG
TGCCGGCGGACGGCTCGTTTGGGGCCCCGGTCAACGTGAACCAGGCATTG
AAAAGGAGGAAAGCGGGGAGATCAGCATCAGGATCGGCATCGGGATCGGG
ATCAGGCGGGGGTGGAGGGAGCGGGGGAGGGCTCTTTGGGCGCCTGTTTT
GAGCGAGGCGTGCCGGCGGACGGCTCGTTTGGGGCCCCGGTCAACGTGAA
CCAGGCATTGAAAAGGAGGAAAGCGGGGAGATCAGCATCAGGATCGGCAT
CGGGATCGGGATCAGGCGGGGGTGGAGGGAGCGGGGGAGGGCTCTTTGGG
CGCCTGTTTTGA
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