mRNA_L-elsbetiae_contig12719.2182.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: D8LCC2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC2_ECTSI) HSP 1 Score: 296 bits (757), Expect = 7.330e-95 Identity = 144/188 (76.60%), Postives = 162/188 (86.17%), Query Frame = 1 Query: 4 QTLWCLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAGWDELRGRVDPSVIRAQQGAARAGAVIAAAAAGSLVGLSIKDAVAG--GGEYDEDY 561 Q LWC SFRPWARD+GLLWLPALLLGG VALGG+H +LREAWF SDMT+LQYL +HVPLSLH GWISCA+LVNLNGYF ++ +LSN KLG +L +VVAAV LGV ITLLREDPIY AVVAWALWAVGSPAGWDELRGRV+P +IR QQG A+AGAVI A+AA +LVGLS+KD V G GG+YDEDY Sbjct: 399 QALWCFSFRPWARDSGLLWLPALLLGGTGVALGGVHRILREAWFTSDMTVLQYLAVHVPLSLHLGWISCATLVNLNGYFATINKLSNRVKLGLALGSVVAAVALGVAITLLREDPIYAAVVAWALWAVGSPAGWDELRGRVEPGLIRTQQGVAKAGAVITASAACTLVGLSLKDLVIGARGGDYDEDY 586
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A0A835Z9R9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9R9_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.150e-45 Identity = 83/169 (49.11%), Postives = 116/169 (68.64%), Query Frame = 1 Query: 1 LQTLWCLSFRPWARDNGL--LWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAGWDELRGRVDPSVIRAQQGAARAG--AVIAAAAA 495 LQTLWC +FRPWAR GL W+PALLLG A ALGG HG+L +A S+++ L Y + VPL+LHFGW++ A+LVN NG+ + A S+ K A++ ++ AV++G +T R DPIY AV+AWAL A+ A W +LRG+VD +V++ Q+ A+ G A++A AAA Sbjct: 125 LQTLWCGAFRPWARAAGLNLQWIPALLLGLGAAALGGAHGILVQALEDSELSPLSYALAFVPLALHFGWLTAAALVNANGFVAAAAPRSHAVKASAAIASIYLAVLVGAAVTFARRDPIYAAVIAWALAAIADEAAWGKLRGQVDETVLQIQRLTAKGGSRAMLAVAAA 293
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: D7FS55_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS55_ECTSI) HSP 1 Score: 160 bits (404), Expect = 2.440e-45 Identity = 77/141 (54.61%), Postives = 99/141 (70.21%), Query Frame = 1 Query: 1 LQTLWCLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAGWDELRGR 423 +Q+ WCLSFR WARD+GLLW PA LLGG A LGG H V+R A A +M+ LQY ++H+P+SLHFGW+SCA+LVN N Y S+ S+ KL SL ++ +AV L V +T DP+Y VVAWAL AV S GW +++GR Sbjct: 141 VQSCWCLSFREWARDSGLLWFPAALLGGTAACLGGAHHVVRGALAAGEMSNLQYGLVHLPVSLHFGWVSCATLVNFNNYI-SLLPFSDKGKLNFSLASIASAVGLAVAVTGTTGDPVYAGVVAWALSAVASEKGWAKMKGR 280
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A0A7S2UXB1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXB1_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.470e-38 Identity = 73/159 (45.91%), Postives = 103/159 (64.78%), Query Frame = 1 Query: 4 QTLWCLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAGWDELRGRVDPSVIRAQQGAARAGAVI 480 Q+LWC +FRPWA+ +G LWLPA LL AVALGG H VL +A + ++++L+Y+I+++PL+LHFGWI+ ASLV+ NGY SV S K AS ++VA V+ + R +P Y VV+WAL AV GW +L G+V +++ G A G+ I Sbjct: 146 QSLWCSAFRPWAKKSGFLWLPAALLTLTAVALGGAHKVLFDALHSEEVSMLEYIIVNIPLTLHFGWITAASLVSWNGYLASVTA-SISIKSLASSASIVAGVIAAALVGWNRIEPFYPLVVSWALAAVADKKGWSQLEGKVPGPILKRLSGLASLGSGI 303
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A0A4D9D883_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D883_9STRA) HSP 1 Score: 130 bits (327), Expect = 8.280e-33 Identity = 66/128 (51.56%), Postives = 85/128 (66.41%), Query Frame = 1 Query: 4 QTLWCLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAV 387 Q+LWC++FRPW + ++P+ LL AV L +H VLREA A M YLI+H+PLSLHFGWI+CA+LVNLNG+F L G KLG +L ++ AV LG +TL DP+ VVAWAL+AV Sbjct: 205 QSLWCVAFRPWV--GRMQFVPSALLAMTAVGLSRVHTVLREAVAAGAMRPWDYLIVHLPLSLHFGWITCATLVNLNGWFAVAPTLRTGDKLGLALASINVAVTLGSQVTLASGDPVIALVVAWALYAV 330
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A4S135_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S135_OSTLU) HSP 1 Score: 111 bits (277), Expect = 1.050e-26 Identity = 60/133 (45.11%), Postives = 74/133 (55.64%), Query Frame = 1 Query: 4 QTLWCLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAG 402 Q LWC +FRPWA+ W+ + LL AVALG H LR A AS + Y HVPLS+HFGWISCA+LVNLN + +L + + A LG +TL DP+Y V+AWAL AV S G Sbjct: 88 QALWCAAFRPWAKAPRHFWVSSALLVAEAVALGSAHRALRAA--ASAASKAWYWTTHVPLSMHFGWISCAALVNLNSHVAKTCAPDT--QLATAFLSAFGAGGLGAAVTLTTGDPVYALVIAWALTAVASDGG 216
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A0A7S1SIL2_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SIL2_9CHLO) HSP 1 Score: 105 bits (262), Expect = 2.230e-25 Identity = 57/129 (44.19%), Postives = 74/129 (57.36%), Query Frame = 1 Query: 16 CLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAG 402 C + PWA+ WL LL AVALGG H VLR A + MT Y HVPLSLHFGWI+ AS+V+LN + LS +L + +VV + V+G G+T++ DP+Y +AWAL V S G Sbjct: 1 CAASPPWAQPPRHFWLSPALLATEAVALGGAHHVLRAAVQSGAMTTATYFTAHVPLSLHFGWITAASVVSLNSL--AALTLSLPAQLATAFASVVGSAVVGTGVTVVTGDPLYALTLAWALSGVASDGG 127
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A0A7S3UZ57_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UZ57_HETAK) HSP 1 Score: 105 bits (261), Expect = 2.980e-25 Identity = 61/160 (38.12%), Postives = 81/160 (50.62%), Query Frame = 1 Query: 55 LWLPALLLGGVAVALGGLHGVLREAWFAS-----DMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAGWDELRGRVDPSVIRAQQGAARAGAVIAAAAAGSLVGLSI 519 LW PA LL A AL G HG +R + + Y + ++PLSLHFGWI+ A+LVN NG + R + K + +V AV G + LR DP+Y VVAWAL AV GW LRG V +++ G AR G ++ G G S+ Sbjct: 3 LWAPAALLAATAAALAGAHGAVRAHFLQGAAAPGGSSWTDYCLCNLPLSLHFGWITAATLVNANGAVANDTRRTVVTKSLVARASVAVAVAAGAAVAWLRRDPVYSLVVAWALAAVADEQGWGRLRGEVPDALLEGYVGFARLGTQLSGVVTGVSWGYSL 162
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A0A090N4T8_OSTTA (Unnamed product n=1 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090N4T8_OSTTA) HSP 1 Score: 107 bits (266), Expect = 1.280e-24 Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = 1 Query: 1 LQTLWCLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAG 402 LQ+LWC++FRPWA+ W+ + LL A ALGG LR A S L + VPLSLHFGWISCA+LVN+N + + ++ + + A LG G+++ D +YGAVVAWAL AV S G Sbjct: 144 LQSLWCVAFRPWAKKPRHFWVSSALLITEAFALGGATRALRGAGSISPSEALFWT-TRVPLSLHFGWISCAALVNVNSHVAKTCAIDT--QIAFAFLSAFGASALGAGVSVFSGDAVYGAVVAWALAAVASDGG 274
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Match: A0A7S3UXA8_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UXA8_HETAK) HSP 1 Score: 102 bits (254), Expect = 6.760e-24 Identity = 62/163 (38.04%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 55 LWLPALLLGGVAVALGGLHGVLREAWFAS-----DMTILQYLIIHVPLSLHFGWISCASLVNLNGYFGSVARLSNGFKLGASLCTVVAAVVLGVGITLLREDPIYGAVVAWALWAVGSPAGWDELRG-RVDPSVIRAQQGAARAGAVIAAAAAGSLVGLSIKD 525 LW PA LL A AL G HG +R + + Y + ++PLSLHFGWI+ A+LVN NG + R + K + +V AV G + LR D +Y VVAWAL AV GW LRG V +++ G+AR G +++ A + LVG +D Sbjct: 3 LWAPAALLAATAAALAGAHGAVRAHFLQGAAAPGGSSWTDYCLCNLPLSLHFGWITAATLVNANGAVANDTRWTVVTKSLVARASVAVAVAAGAAVAWLRRDAVYSFVVAWALTAVADERGWGRLRGGEVPDALLEGYVGSARLGKLLSIAVSWGLVGYWNRD 165 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12719.2182.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12719.2182.1 >prot_L-elsbetiae_contig12719.2182.1 ID=prot_L-elsbetiae_contig12719.2182.1|Name=mRNA_L-elsbetiae_contig12719.2182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=188bp LQTLWCLSFRPWARDNGLLWLPALLLGGVAVALGGLHGVLREAWFASDMTback to top mRNA from alignment at L-elsbetiae_contig12719:3487..5289- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12719.2182.1 ID=mRNA_L-elsbetiae_contig12719.2182.1|Name=mRNA_L-elsbetiae_contig12719.2182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1803bp|location=Sequence derived from alignment at L-elsbetiae_contig12719:3487..5289- (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12719:3487..5289- >mRNA_L-elsbetiae_contig12719.2182.1 ID=mRNA_L-elsbetiae_contig12719.2182.1|Name=mRNA_L-elsbetiae_contig12719.2182.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1128bp|location=Sequence derived from alignment at L-elsbetiae_contig12719:3487..5289- (Laminarionema elsbetiae ELsaHSoW15)back to top |