mRNA_L-elsbetiae_contig12575.2080.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12575.2080.1
Unique NamemRNA_L-elsbetiae_contig12575.2080.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A6H5JCT2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCT2_9PHAE)

HSP 1 Score: 213 bits (542), Expect = 7.530e-63
Identity = 121/200 (60.50%), Postives = 138/200 (69.00%), Query Frame = 1
Query:    1 SAVTHAYCWCNTRYVATLSFLVLIGCFPSGCGAFV----CRVRNLQLTHEPA----RRSNGLVERRLGALAADPTPRSSAKEKEENELRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            +A +H   W  T     L  ++ + C    CGAF+         LQLTH+ A    R        R  A AA    RS+  E  E ELR +TW+EVE R+ R+ AETG AAVIVPVGATEQHGPNGLIGTDHMTAEAVARGV E +GAILAP+INYGMSHHHESFPGTVTLRPATFVAV+RDVA+SLS  GFTHVLF+NG
Sbjct:    9 AAASHRLAWALTT-TTRLYLVIAVSCLSRPCGAFLVPSPAGSTKLQLTHDTASGRSRCRRPCSATREEATAAARQGRSNVGE--ETELRLMTWMEVEARVKRDTAETGKAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVCEVTGAILAPTINYGMSHHHESFPGTVTLRPATFVAVVRDVAASLSGAGFTHVLFVNG 205          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: D8LCG6_ECTSI (Creatininase subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCG6_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 7.890e-53
Identity = 93/113 (82.30%), Postives = 102/113 (90.27%), Query Frame = 1
Query:  247 LTWLEVEDRIIREVAE---TGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            +TW+EVE R+ R+ AE   TG AAVIVPVGATEQHGPNGLIGTDHMTAEAVARGV E +GAILAP+INYGMSHHHESFPGTVTLRPATFVAV+RDVA+SLS  GFTHVLF+NG
Sbjct:    1 MTWMEVETRVKRDTAEATQTGKAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVCEMTGAILAPTINYGMSHHHESFPGTVTLRPATFVAVVRDVAASLSGAGFTHVLFVNG 113          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A6H1TTU6_9CYAN (Creatininase family protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TTU6_9CYAN)

HSP 1 Score: 127 bits (320), Expect = 4.480e-32
Identity = 61/113 (53.98%), Postives = 83/113 (73.45%), Query Frame = 1
Query:  238 LRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            L   TW EVE  + R      +  +++P+G+TEQHGP G+IGTD M AEA+ARGV +A+ A++AP+IN GM+ HH SFPGT++LRP+T + V+RD  +SL+K GFTH  FING
Sbjct:    3 LHLTTWPEVEAYLER------SRGIVIPIGSTEQHGPTGVIGTDAMCAEAIARGVGDATEALVAPTINVGMALHHTSFPGTISLRPSTLMLVVRDYLTSLTKAGFTHFFFING 109          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A7C9U3G6_9CYAN (Creatininase family protein n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9U3G6_9CYAN)

HSP 1 Score: 126 bits (316), Expect = 1.740e-31
Identity = 58/113 (51.33%), Postives = 82/113 (72.57%), Query Frame = 1
Query:  238 LRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            L   TW EVED +++      +  +I+P+G+TEQHGP GLIGTD + AEA+ARG  EA+ A++AP+IN GM+ HH  FPGT++L+P+T + V+RD  ++L+K GFT   FING
Sbjct:    3 LHLCTWPEVEDYLVK------STGIIIPIGSTEQHGPTGLIGTDAICAEAIARGTGEATNALVAPTINVGMALHHAEFPGTISLKPSTMILVVRDYLTTLAKAGFTKFFFING 109          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A0D9A0S7_9CYAN (Amidase n=1 Tax=Aliterella atlantica CENA595 TaxID=1618023 RepID=A0A0D9A0S7_9CYAN)

HSP 1 Score: 125 bits (315), Expect = 2.450e-31
Identity = 60/113 (53.10%), Postives = 82/113 (72.57%), Query Frame = 1
Query:  238 LRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            L   TW EVED + +      +  +I+P+G+TEQHGP GLIGTD + AEA+ARGV EA+ A++AP+IN GM+ HH +FPGT++LRP+T + ++RD  S L+K GFT   FING
Sbjct:    3 LHLCTWSEVEDYLQQ------SQGIILPIGSTEQHGPTGLIGTDAICAEAIARGVGEATSAVVAPTINVGMALHHTAFPGTISLRPSTMILLIRDYVSCLAKAGFTKFFFING 109          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A243SZ92_9GAMM (Amidase n=2 Tax=Halomonas TaxID=2745 RepID=A0A243SZ92_9GAMM)

HSP 1 Score: 125 bits (314), Expect = 3.440e-31
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1
Query:  238 LRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            L+  TW EVE  + R   ETG   +IVP+G+TEQHGPNGL+GTD +  E VA  V E  G ++AP+ N GM+ HH +FPGT++LRP+T +AV+RD   SLS+ GFTHV F+NG
Sbjct:    3 LQHATWQEVEAYLTR---ETG---IIVPIGSTEQHGPNGLVGTDAICPETVAWEVGERHGVLVAPTQNLGMAQHHLAFPGTISLRPSTLIAVLRDTVQSLSRHGFTHVFFLNG 109          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A1H5XCB6_9GAMM (Creatinine amidohydrolase n=5 Tax=Halomonas TaxID=2745 RepID=A0A1H5XCB6_9GAMM)

HSP 1 Score: 125 bits (314), Expect = 3.440e-31
Identity = 62/113 (54.87%), Postives = 81/113 (71.68%), Query Frame = 1
Query:  238 LRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            L+  TW EVE  + R   ETG   +IVP+G+TEQHGPNGL+GTD +  E VA  V E  G ++AP+ N GM+ HH +FPGT++LRP+T +AV+RD   SLS+ GFTHV F+NG
Sbjct:    3 LQHATWQEVEAYLTR---ETG---IIVPIGSTEQHGPNGLVGTDAICPETVAWEVGERHGVLVAPTQNLGMAQHHLAFPGTISLRPSTLIAVLRDTVQSLSRHGFTHVFFLNG 109          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A073CAT7_PLAAG (Uncharacterized protein n=13 Tax=Oscillatoriales TaxID=1150 RepID=A0A073CAT7_PLAAG)

HSP 1 Score: 125 bits (313), Expect = 4.830e-31
Identity = 60/113 (53.10%), Postives = 81/113 (71.68%), Query Frame = 1
Query:  238 LRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            L   TW EVE      V  T +  +I+P+G+TEQHGP GLIGTD + AEA+A+GV EA+ A+++P+IN GM+ HH +FPGT++LRP T + V+ D  +SL+K GFTH  FING
Sbjct:    3 LHLSTWQEVE------VYLTHSGGIIIPIGSTEQHGPTGLIGTDAICAEAIAKGVGEATKALVSPTINVGMALHHTAFPGTISLRPTTLIQVINDYITSLAKVGFTHYFFING 109          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A858R3U3_9PROT (Creatininase family protein n=1 Tax=Rhodospirillaceae bacterium B3 TaxID=2728875 RepID=A0A858R3U3_9PROT)

HSP 1 Score: 125 bits (313), Expect = 4.950e-31
Identity = 58/114 (50.88%), Postives = 85/114 (74.56%), Query Frame = 1
Query:  235 ELRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            +L+ +TW +V+  + R         +I+P+G+TEQHGP GL+GTD +TAEAVARG+ EA GAI+ P+++ GM+HHH +F GT+TLRP T +A+++DV +SL + GF  VLF+NG
Sbjct:    2 QLQLMTWPDVQAYLGRRTD------IIIPIGSTEQHGPTGLVGTDALTAEAVARGLGEAVGAIVGPTLSVGMAHHHLAFTGTITLRPTTLIALVKDVVASLRRHGFRQVLFVNG 109          
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Match: A0A7W7V6Z2_9GAMM (Creatinine amidohydrolase n=1 Tax=Rehaibacterium terrae TaxID=1341696 RepID=A0A7W7V6Z2_9GAMM)

HSP 1 Score: 124 bits (312), Expect = 6.460e-31
Identity = 59/113 (52.21%), Postives = 81/113 (71.68%), Query Frame = 1
Query:  238 LRQLTWLEVEDRIIREVAETGAAAVIVPVGATEQHGPNGLIGTDHMTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRDVASSLSKTGFTHVLFING 576
            L+  TW EVE  + R      +  +IVP+G+TEQHGPNGLIGTD +  E VA GV+E    ++AP+IN GM+ HH +FPG++TLRP+T +AV+RD+  SL++TGF H+ F NG
Sbjct:    3 LQLSTWPEVEAYLTR------STGIIVPIGSTEQHGPNGLIGTDALCPEIVANGVAERIDVLVAPTINVGMAQHHLAFPGSITLRPSTLIAVIRDMVQSLARTGFRHIYFFNG 109          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12575.2080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCT2_9PHAE7.530e-6360.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCG6_ECTSI7.890e-5382.30Creatininase subfamily n=1 Tax=Ectocarpus siliculo... [more]
A0A6H1TTU6_9CYAN4.480e-3253.98Creatininase family protein n=3 Tax=Cyanobacteria ... [more]
A0A7C9U3G6_9CYAN1.740e-3151.33Creatininase family protein n=1 Tax=Oscillatoria s... [more]
A0A0D9A0S7_9CYAN2.450e-3153.10Amidase n=1 Tax=Aliterella atlantica CENA595 TaxID... [more]
A0A243SZ92_9GAMM3.440e-3154.87Amidase n=2 Tax=Halomonas TaxID=2745 RepID=A0A243S... [more]
A0A1H5XCB6_9GAMM3.440e-3154.87Creatinine amidohydrolase n=5 Tax=Halomonas TaxID=... [more]
A0A073CAT7_PLAAG4.830e-3153.10Uncharacterized protein n=13 Tax=Oscillatoriales T... [more]
A0A858R3U3_9PROT4.950e-3150.88Creatininase family protein n=1 Tax=Rhodospirillac... [more]
A0A7W7V6Z2_9GAMM6.460e-3152.21Creatinine amidohydrolase n=1 Tax=Rehaibacterium t... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12575contigL-elsbetiae_contig12575:141..1599 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.9
Seed ortholog evalue2.7e-25
Seed eggNOG ortholog2880.D8LCG6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Creatinine amidohydrolase
EggNOG OGs2SG4P@2759,COG1402@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size816
Cds size243
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12575.2080.1prot_L-elsbetiae_contig12575.2080.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12575 342..982 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815449.2602403-UTR-L-elsbetiae_contig12575:140..3411622815449.2602403-UTR-L-elsbetiae_contig12575:140..341Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12575 141..341 -
1691682903.709452-UTR-L-elsbetiae_contig12575:140..3411691682903.709452-UTR-L-elsbetiae_contig12575:140..341Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12575 141..341 -
1622815449.3039987-UTR-L-elsbetiae_contig12575:982..10601622815449.3039987-UTR-L-elsbetiae_contig12575:982..1060Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12575 983..1060 -
1691682903.7447448-UTR-L-elsbetiae_contig12575:982..10601691682903.7447448-UTR-L-elsbetiae_contig12575:982..1060Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12575 983..1060 -
1622815449.3147893-UTR-L-elsbetiae_contig12575:1305..15991622815449.3147893-UTR-L-elsbetiae_contig12575:1305..1599Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12575 1306..1599 -
1691682903.7570357-UTR-L-elsbetiae_contig12575:1305..15991691682903.7570357-UTR-L-elsbetiae_contig12575:1305..1599Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig12575 1306..1599 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815449.276916-CDS-L-elsbetiae_contig12575:341..5721622815449.276916-CDS-L-elsbetiae_contig12575:341..572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12575 342..572 -
1691682903.7193584-CDS-L-elsbetiae_contig12575:341..5721691682903.7193584-CDS-L-elsbetiae_contig12575:341..572Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12575 342..572 -
1622815449.2901864-CDS-L-elsbetiae_contig12575:970..9821622815449.2901864-CDS-L-elsbetiae_contig12575:970..982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12575 971..982 -
1691682903.7314413-CDS-L-elsbetiae_contig12575:970..9821691682903.7314413-CDS-L-elsbetiae_contig12575:970..982Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12575 971..982 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12575.2080.1

>prot_L-elsbetiae_contig12575.2080.1 ID=prot_L-elsbetiae_contig12575.2080.1|Name=mRNA_L-elsbetiae_contig12575.2080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=81bp
MTAEAVARGVSEASGAILAPSINYGMSHHHESFPGTVTLRPATFVAVMRD
VASSLSKTGFTHVLFINGKCVVHSTFSPLR*
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mRNA from alignment at L-elsbetiae_contig12575:141..1599-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12575.2080.1 ID=mRNA_L-elsbetiae_contig12575.2080.1|Name=mRNA_L-elsbetiae_contig12575.2080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=1459bp|location=Sequence derived from alignment at L-elsbetiae_contig12575:141..1599- (Laminarionema elsbetiae ELsaHSoW15)
TCAGCTGTGACACACGCATATTGCTGGTGCAACACAAGATATGTCGCCAC TCTATCGTTTTTAGTTTTAATCGGTTGCTTCCCAAGCGGATGTGGAGCCT TTGTTTGTCGCGTTAGGAATTTGCAGTTGACTCACGAACCCGCACGGAGA TCGAACGGGCTGGTCGAGCGTAGGTTAGGAGCACTGGCAGCGGATCCCAC CCCTAGAAGTTCAGCGAAGGAAAAGGAAGAGAACGAGCTGCGCCAGCTGA CTTGGTTAGAGGTGGAGGACCGCATCATTCGAGAGGTTGCCGAGGTGGGG CAAATCGTTGTTGATATCTTGGCTGACGTTGTTTCCTCTTGGGGCGACAA CCTCGGCTGCTCTACGCTCTACGTAGGCTTTTGGGCACATTTCAAACCGC AATGTAGATCCTCATCGCATTATTGCGTTGGTCAACACACGCTGTAGATC CGAAATTGTTTTGAGGAATGAGAAGCGCTGACTGGGTTTGGAATACATAC ATAAATGAACATGCTCGCGTGTTCGTTCCTTGCTTCCAGACAGGCGCCGC GGCCGTGATCGTTCCTGTTGGCGCCACGGAGCAGCACGGGCCCAATGGGC TCATCGGAACGGACCACATGACCGCGGAGGTGAAACAAGGGAGAGGGTGG CGGGCATAGTATTTCACCGGAACCAGCACTAACTCCGAATTTCCTTTTTG CCTGCTGCCACCGAGGTTGCGGCGGCTTTGCATGTAAATAGCACTCTCAA GGCGGCGGATGGATTTGAATTTGTTGCTTCCATATTCTTGCAACGTTTTG TATACTGGGGTTAGCTCTCCACTCCAGCCTTCCTCCAGGCTCTGTCTACT AGACTATCTACACATGCACGTAACAGACTTGATGCATTTGTCCGTCATAA AAGTATATACGAAATGTTTCCCCTTTCACCTCTCCCCCCCCATGCATGCC CTCCGTCCCCGAAAACCGAATACGGCCTCGCACCCACCGCGCCGGCGGCT TGGACCCCATACAATTGGCAAATCTAGGCCGTCGCCCGCGGTGTTTCCGA GGCCAGCGGCGCGATCCTCGCCCCGAGTATCAACTACGGCATGAGCCACC ACCACGAATCCTTCCCGGGCACCGTAACCCTGAGGCCAGCAACGTTCGTC GCGGTCATGAGAGACGTTGCGTCTTCTCTGTCCAAGACCGGCTTCACGCA CGTCCTCTTTATCAATGGCAAGTGTGTGGTGCATTCGACCTTCTCCCCTC TCCGGTAACGAGCAAGTAAGTGTCGGCGCCCGCCCGCCCGCTCGCCCGCC TGCCCGCCCTACGCAGCAGTGGACGATTCGCCGGGCATCGGGACCCAGCC CTAACCGTACCGCGCCTTGTTTTACACGCGGTTATTTGTTGCTGCGCAAG ATGTCTTGTTCGTGAAGACGGTGGGGGTGCTCTGTTTTAGCGGGGTACAT ACAGCACTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12575:141..1599-

>mRNA_L-elsbetiae_contig12575.2080.1 ID=mRNA_L-elsbetiae_contig12575.2080.1|Name=mRNA_L-elsbetiae_contig12575.2080.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=486bp|location=Sequence derived from alignment at L-elsbetiae_contig12575:141..1599- (Laminarionema elsbetiae ELsaHSoW15)
ATGACCGCGGAGATGACCGCGGAGGCCGTCGCCCGCGGTGTTTCCGAGGC
CAGCGGCGCGATCCTCGCCCCGAGTATCAACTACGGCATGAGCCACCACC
ACGAATCCTTCCCGGGCACCGTAACCCTGAGGCCAGCAACGTTCGTCGCG
GTCATGAGAGACGTTGCGTCTTCTCTGTCCAAGACCGGCTTCACGCACGT
CCTCTTTATCAATGGCAAGTGTGTGGTGCATTCGACCTTCTCCCCTCTCC
GGTAAGCCGTCGCCCGCGGTGTTTCCGAGGCCAGCGGCGCGATCCTCGCC
CCGAGTATCAACTACGGCATGAGCCACCACCACGAATCCTTCCCGGGCAC
CGTAACCCTGAGGCCAGCAACGTTCGTCGCGGTCATGAGAGACGTTGCGT
CTTCTCTGTCCAAGACCGGCTTCACGCACGTCCTCTTTATCAATGGCAAG
TGTGTGGTGCATTCGACCTTCTCCCCTCTCCGGTAA
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