mRNA_L-elsbetiae_contig12054.1730.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
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Overview
Homology
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE) HSP 1 Score: 992 bits (2564), Expect = 0.000e+0 Identity = 575/1139 (50.48%), Postives = 706/1139 (61.98%), Query Frame = 3
Query: 1065 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAA-------PARGLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYHRN 4448
T G++L T V LTDE++MDGY D DF P + ++ A +A + S+ G A AA+ P P +GS K DIN +H HA E LLR+ A+++ + LTG LE C C+ K RRASVPR G RAS+P H+DLCG VP+L G++YL +DSASR+ VYGLR+KSD A + + D+ +Y + C R+D GTEWT FR FC GI +EFT PQ N VESAIWRI+K RRS +F + DF+ PG+D RGDR W+ S+K+ + LN+ +TKANPG SP + FTG + VLPFFQPG MR+ RR+KLDDQ C +L G NH TV VLKAS+GRV +T ++ WV + A G PP+ S P +A PAP XXXXXXXXXXX PA +PPL+ +R+L G +A M + RL SRTRSG RH GL+S + L+S L + ++ R + G G A P+A LA REDIDA LRDQ PP RP+LP C DLRVPK+Y +A + HRHL+ D+M REF+GLL AGTF A ++LA++ACEL L++ H D++QAFV +ELE DVYMRLP+GCG +SG++V+L KSLYGL+QASRQWHA LKRCL++L FEQC+ADACVFRLIE+G VVL LVVHVDDIF+VGERER ++F +L VPV+NLG LRWYSGCFY R++E GRLTISQ+ F ELA EYGV G+SVP+ GVKL DFD+DE E PFREL+GSLMWLA QTRPDI NAVRAVARYCA PKL+HW AA D+LGY +RTS GISFQ+G++ G S+ G+ADADFAS A DRRS SGG+V CGGGAVSWFSRTQKCVT STTEAEYVALGDV KE+LF+RQ+WRF++P+ MPCIPV+EDN+G I LA NP+SNSNSKHIDVRHHFLRELVER+EI VIHVPS YQ ADFLTK+L KDAFE H++
Sbjct: 564 TFPGMDLGDTSV--LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIDCFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRPWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVTVLKASTGRVVYTNNVSWVTSAPAG----------------------------------EGVPRPPSATSPSP-------------SATPAPGNXXXXXXXXXXXXXXXYQXPPPXDPA--MPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA----------------------------------------------------------KMLAALACELNLDLCHFDVEQAFVRSELEE--DVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHQH 1578
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE) HSP 1 Score: 988 bits (2554), Expect = 0.000e+0 Identity = 583/1163 (50.13%), Postives = 713/1163 (61.31%), Query Frame = 3
Query: 1065 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPL---------------SGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPAR-----------GLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYHRNIVMNL 4463
T G++L T V LTDE++MDGY D DF P + ++ A +A + S+ G A AA+ P P +GS K DIN +H HA E LLR+ A+++ + LTG LE C C+ K RRASVPR G RAS+P H+DLCG VP+L G++YL +DSASR+ VYGLR+KSD A + + D+ +Y + C R+D GTEWT FR FC GI +EFT PQ N VESAIWRI+K RRS +F + DF+ PG+D RGDRLW+ S+K+ + LN+ +TKANPG SP + FTG + VLPFFQPG MR+ RR+KLDDQ C +L G NH TV VLKAS+GRV +T ++ WV + A S + P XXXX XXX XX P+P XXXXXXXXXXX +PPL+ +R+L G +A M + RL SRTRSG RH GL+S + L+S L + ++ R + G G A P+A LA REDIDA LRDQ PP RP+LP C DLRVPK+Y +A + HRHL+ D+M REF+GLL AGTF A ++LA++ACEL L++ H D++QAFV +ELE DVYMRLP+GCG +SG++V+L KSLYGL+QASRQWHA LKRCL++L FEQC+ADACVFRLIE+G VVL LVVHVDDIF+VGERER ++F +L VPV+NLG LRWYSGCFY R++E GRLTISQ+ F ELA EYGV G+SVP+ GVKL DFD+DE E PFREL+GSLMWLA QTRPDI NAVRAVARYCA PKL+HW AA D+LGY +RTS GISFQ+G++ G S+ G+ADADFAS A DRRS SGG+V CGGGAVSWFSRTQKCVT STTEAEYVALGDV KE+LF+RQ+WRF++P+ MPCIPV+EDN+G I LA NP+SNSNSKHIDVRHHFLRELVER+EI VIHVPS YQ ADFLTK+L KDAFE HR+ VMNL
Sbjct: 710 TFPGMDLGDTSV--LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXSASSTPAXXXXXXXXXXXXXXXXQXXSATSPSPSAXXXXXXXXXXXXXXXXXXXXXDQXXXXXXXAMPPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA----------------------------------------------------------KMLAALACELNLDLCHFDVEQAFVRSELEE--DVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNL 1797
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE) HSP 1 Score: 971 bits (2510), Expect = 0.000e+0 Identity = 576/1195 (48.20%), Postives = 708/1195 (59.25%), Query Frame = 3
Query: 1065 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLPP----------------------------------------------------------LSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYHRNIVMNL 4463
T G++L T V LTDE++MDGY D + DF P + ++ A A + S+ G A AA+ P P +GS K DIN +H HA E LLR+ A+++ + LTG LE C C+ K RRASVPR G RAS+P H+DLCG VP+L G++YL +DSASR+ VYGLR+KSD A + + D+ +Y + C R+D GTEWT FR FC GI +EFT PQ N VESAIWRI+K RRS +F + DF+ P +D RGDRLW+ S+K+ + LN+ +TKANPG SP + FTG + VLPFFQPG MR+ RR+KLDDQ C +L G NH TV VLKAS+GRV +T ++ WV + A +G P PP S XXXXXXXXXXXXX AA++P L+ +R+L G +A M + RL SRTRSG RH GL+S + L+S L + ++ R + G G A P+A LA REDIDA LRDQ PP RP+LP C DLRVPK+Y +A + HRHL+ D+M REF+GLL AGTF A ++LA++ACEL L++ H DI+QAFV +ELE DVYMRLP+GCG +SG++V+L KSLYGL+QASRQWHA LKRCL++L FEQC+ADACVFRLIE+G VVL LVVHVDDIF+VGERER ++F +L VPV+NLG LRWYSGCFY R++E GRLTISQ+ F ELA EYGV G+SVP+ GVKL DFD+DE + PFREL+GSLMWLA QTRPDI NAVRAVARYCA PKL+HW AA D+LGY +RTS GISFQ+G++ G S+ G+ADADFAS A DRRS SGG+V CGGGAVSWFSRTQKCVT STTEAEYVALGDV KE+LF+RQ+WRF++P+ MPCIP++EDN+G I LA NP+SNSNSKHIDVRHHFLRELVER+EI VIHVPS YQ ADFLTK+L+KDAFE HR+ VMNL
Sbjct: 204 TFPGMDLGDTSV--LTDEQLMDGYDDTPYEDFFPVFIPESDAANAAGVLD-SIDGGADFDLGA-AALGPGASPFALGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFDV-DFASIPSLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGS------------------------------AGITAAPTPPPFTPPVV--SINFGPAXXXXXXXXXXXXXXXXXXXXXAASSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA----------------------------------------------------------KMLAALACELNLDLCHFDIEQAFVRSELEE--DVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNL 1291
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE) HSP 1 Score: 964 bits (2491), Expect = 7.180e-310 Identity = 595/1156 (51.47%), Postives = 722/1156 (62.46%), Query Frame = 3
Query: 1065 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAA-----------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLP---------PLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGG--AQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYH 4442
T G++L T V LTDE++MDGY D DF P + ++ A +A + S+ G A AA+ P P +GS K DIN +H HA E LLR+ A+++ + LTG LE C C+ K RRASVPR G RAS+P H+DLCG VP+L G++YL +DSASR+ VYGLR+KSD A + + D+ +Y + C R+D GTEWT FR FC GI +EFT PQ N VESAIWRI+K RRS +F + DF+ PG+D RGDRLW+ S+K+ + LN+ +TKANPG SP + FTG + VLPFFQPG MR+ RR+KLDDQ C +L G NH TV VLKAS+GRV +T ++ WV + A + XXXXXXXXXXXXXXXXX S T XXXX XXXXXX XXXXXXXXXXXXX PL+ +R+L G +A M + RL SRTRSG RH GL+S + L+S L + ++ R + G G A P+A LA REDIDA LRDQ PP RP+LP C DLRVPK+Y +A + HRHL+ D+M REF+GLL AGTF A ++LA++ACEL L++ H D++QAFV +ELE DVYMRLP+GCG +SG++V+L KSLYGL+QASRQWHA LKRCL++L FEQC+ADACVFRLIE+G VVL LVVHVDDIF+VGERER ++F +L VPV+NLG LRWYSGCFY R++E GRLTISQ+ F ELA EYGV G+SVP+ GVKL DFD+DE E PFREL+GSLMWLA QTRPDI NAVRAVARYCA PKL+HW AA D+LGY +RTS GISFQ+G++ G S+ G+ADADFAS A DRRS SGG+V CGGGAVSWFSRTQKCVT STTEAEYVALGDV KE+LF+RQ+WRF++P+ MPCIPV+EDN+G I LA NP+SNSNSKHIDVRHHFLRELVER+EI VIHVPS YQ ADFLTK+L KDAFE H
Sbjct: 564 TFPGMDLGDTSV--LTDEQLMDGYDDTPHQDFFPVFIPESDAANVAGVLD-SIDGGSDFDLGA-AALGPGASPFTLGSTEKSVDINRFHRSLAHACEPLLRETAQQRGIVLTGKLEPCTDCMKAKGRRASVPRGPGARASKPLGRVHLDLCGPLVPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRVDNGTEWTRGDFRRFCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAGRVFHV-DFASIPGLDERGDRLWMESAKWAADALNQSATKANPGRRSPHEMFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXAASSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLTAHAMRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXXXXXXXXXAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQREFYGLLEAGTFTPA----------------------------------------------------------KMLAALACELNLDLCHFDVEQAFVRSELEE--DVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESH 1644
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5LE52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LE52_9PHAE) HSP 1 Score: 905 bits (2340), Expect = 1.930e-299 Identity = 568/1237 (45.92%), Postives = 701/1237 (56.67%), Query Frame = 3
Query: 1065 TLAGLELDRTVVGELTDEKMMDGYHDEHFFDFAPPPLSDAAAEALAAIFSPSVAQGPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAA-----------------------PARGLPPLSQRVIRELGWGQ-AGVMPEVRLRSRTRSG----------------GKKGSEEVR----------------------------RHELGLLSFAGKEVLLSALAGENVLESLREQKI--------------GGTRGQGEMQSNAPPIR---------------------TPVATGGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYHRNIVMNL 4463
T G++L T V TDE +MDGY + DF P + + A A + G AA+ P P +GS K DIN +H HA E LLR+ A+++ + LTG LE C C+ K +RASVP+ G RAS+P H+DLCG P+L G++YL +DSASR+ VYGLR+KSD A + + D+ +Y + C R+D GTEWT FR C GI +EFT PQ N VESAIWRI+K RRS + + D++ G+D RGDRLWL S+K+ + LN+ +TKANPG SP + FTG + VLPFFQPG MR+ RR+KLDDQ C +L G NH TV VLKAS+GRV +T ++ V + A P P+ PA XXXX XXXXXX P XXXXXXXXXXXXX P LPPLS +R+L G+ A M RL RT+SG G GS ++R RH G+ A A + + + ++ G RG G Q + V G +P+A LA REDIDA LRDQ PP RP+LP C DLR+ K+Y +A +Y RHL+ D+M REF GLL AGTF A ++LA++ACEL L++ + D++QAFV +ELE D+YMRLP+GCG +SG++V+L +SLYGL+QASRQWHA LKRCL++L FEQC ADACVFRLIE G V L L VHVDDIF+VGERER E+F +L VPV+NLG LRWYSGCF R +E GRLTISQ+ F ELA EYGV GKSVP+ VKL DFD+DEE + PFREL+GSLMWLA QTRPDI NAV AVARYCA PK +HW+AA +LGY KRT+++G+SFQ+G++ G S+ G+ADADFAS A DRRS SGG+V CGGG VSWFSR QKCVT STTEAEYVALGDV KE+LF++QVWRF++P+ +MPCIPV+EDN+G I LA NP+SNSNSKHIDV HHFLRELVER+EI VIHVPS YQHADFLTK+L KDAFE HR+ VMNL
Sbjct: 437 TFPGMDLGDTSV--FTDELLMDGYDKTPYQDFFPAFMPENEAAIAAGVMDGIDGVGF---DVGVAALGPGASPFSIGSTDKSVDINRFHRSLAHACEPLLRETARQRGITLTGTLEPCSDCMKAKGKRASVPKGPGARASKPLGRVHLDLCGPLAPSLGGNLYLFVAVDSASRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECFRIDNGTEWTRGEFRRCCDDNGIGVEFTPPGVPQYNGVVESAIWRIMKAGMAARRSAARVLNV-DYASITGLDPRGDRLWLESAKWAADALNQSATKANPGRRSPHELFTGQQGPFRVLPFFQPGYMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSCVTSAPAGKGGSAGIPAAPTPP---------------PFTPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXXPGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPPLPPPPGPALPPLSAHAMRQLRPGKKAEGMKGPRLPGRTKSGTRHSTGFISMLDKNTLGDGGSGDLRAXXXXXXXXXXXXEQGGALAAVDLGAVSRHAAASPGQEGRGYEGPAAARPHEIGHEAQHRVHLDAGQEHSGIDAGGPERGGGGAQGDXXXXXLXXXXXXXXXXXXXXEQGGALAAVDLGAVGAGLPLACATLLANREDIDAMLRDQRPPEQRPDLPNCQASDLRISKSYNEAMASEY--RHLWGDSMRREFFGLLEAGTFTPA----------------------------------------------------------KMLAALACELNLDLCYFDVEQAFVRSELEE--DMYMRLPQGCGALSGMIVKLGRSLYGLRQASRQWHAMLKRCLVALGFEQCTADACVFRLIEGGGVDLILEVHVDDIFAVGERERCEKFGADLNKSVPVKNLGELRWYSGCFDERSKETGRLTISQQTFTDELAAEYGVAGGKSVPMSSVVKLSDFDADEEATDFPFRELVGSLMWLATQTRPDIANAVWAVARYCASPKQVHWDAAMGILGYAKRTTNMGVSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRRQKCVTLSTTEAEYVALGDVAKEILFLKQVWRFILPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVTHHFLRELVERKEISVIHVPSPYQHADFLTKSLPKDAFESHRDFVMNL 1590
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE) HSP 1 Score: 887 bits (2293), Expect = 1.720e-298 Identity = 536/1168 (45.89%), Postives = 669/1168 (57.28%), Query Frame = 3
Query: 1269 PSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVP-RTGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAA--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLL---------------PPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGA------------AAAPAR-------------------------GLPPLSQRVIRELGWGQAGVMPEVRLRS-----------------------------------------RTRSGGKK------GSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYHRNIVMNLE 4466
P +RP VG K D+N H S HA EFLLR+ AK+ + LTG L+ C C+ K ++A VP ++G RA P +H+DLCG +L GS +++ +DS SR+ +YG+R+KSDT ++ + D+ G R+D G E+ R F FC AGIR +TA TPQQN P ESAIWR+ K R LF DF+ PG G+RLWL S + NR TKAN G SP + FTG P ++PF QPG MR R K+D Q V C +L +G NH S V VLK ++GRVC T ++VWV+ A + PL P S PP + + + XXXX XXX TA PA XXXXXXXX A+ PA +PPL+ R IREL G+ + R R+ R + GG + GS + H GL+S K LLS L ++++ R++ I + G + R T G + VP A LA REDID A+RD PP P+LP C+ DLRVPK Y +A QH L++ ++++EF GL+ A D GE +APTVAVSSVRLLA+MACE L + H DIKQAFV ++L+ DV+MRLP+GCG +SG++V+L KSLYGLKQASRQWH+ L RCL+ L F QC+AD CVFRLIE GRVV+TLVVHVDDIFS+GE ER ++F R+L MVPV+NLG LRWYSGCFY RD +AG L ISQ+ +A EL E+GV++GK +PL VG+KL +FD DEE V PFRELIGSLMWLA QTRPDI NAVRAVARYCA PK +HW A +LGYV RTS LGI+F++GS+ GLS+ F DAD+AS A DRRS SGG+VMCGGG +SWFSRTQKCVT STTEAEYV+L DV KEVLF+RQVWRF++PEA MPCIPV+EDN+G I LA NP+SNSNSKHIDVRHHF+RELV R+EI + HV SAYQHA+FLTKAL FE+HRN VM+++
Sbjct: 22 PGKRPFSVGKPTKIIDVNLLHVSSSHANEFLLRELAKQHGLRLTGVLQPCGGCLQAKGKKAGVPHQSGTRAERPHDLWHIDLCGPMTASLGGSFFMIMFVDSFSRWMKLYGMRRKSDTLAFVKKLLADMSGTGVP--RSFRMDNGGEFIGRDFIAFCDNAGIRRTYTAPGTPQQNGPAESAIWRVNKAGHAARLEAPRLFPKIDFTRVPGFGRDGERLWLESCHWAAGGFNRSPTKANVGYKSPHELFTGRPPPLQIVPFLQPGYMRVTRARKMDPQAVLCCYLNNGDNHHESAVKVLKFATGRVCMTNNVVWVSDRAPLLTPPLELPAPADEGGDSNVAAAPFLIEYISPPLLPPSPYARPPTSPAAILSQAXXXXXXXXXXXXXXXXXXXXXPFTTTAPPATPLAAAXXXXXXXXXXXXXXXXXXXXXXASPPASXXXXXXXXXXXXXXXXXXXXXXXXTNMPPLTTRTIRELDVGRGDMRVSGRTRAAAKDQGXXXXXXXXXXXXXXXXXXXXXXETRVPGRLRGRRVRFQDGGAERSTSPGGSGDALAHRFGLVSLQDKATLLSTLTTRSIVDGGRKE-IPSSAGGRDGAEPGGREREGTKTEGLREEVPFACATLLASREDIDRAMRDLDPPEVAPDLPQCYASDLRVPKTYREAVSS--QHADLWIHSVEKEFRGLMEA-------------------------------------------------DCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDE--DVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKALHAGDFEFHRNYVMSMD 1133
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE) HSP 1 Score: 857 bits (2214), Expect = 1.290e-282 Identity = 536/1036 (51.74%), Postives = 655/1036 (63.22%), Query Frame = 3
Query: 1230 GPACPSDAFAAVYPSRRPHHVGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPRTG-GRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSG---TGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGL----------PPLSQRVIRELGWGQAGVMPEVRLRSRTRSGGKKGSEEVRR------------HELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPV--------ATGGAQPSV-PVALVM---RLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEA 4223
GP S A A P VG DIN +H +GH EFL+R+ AK+Q V+L G L+ CV C+ K RRA VPR G RA+ P H+D+ G + A GS YL+ +DSASR+ YG+R KSDT T + + DL G + C R+D E+T+ F FC AGIR E+TA TP+QNA VESAIWR +KG RR V + G D + PG+D G RLWLAS+ + C NR +T NP MSPF+AF G KP V+PFFQ GMMR R SK D Q+V C +L+ NH +T VL+A +GR+C + ++VW+ R A XXXXXXXXXXXXXXXXXXXX + T PP XXXX X T AP XXXXXXXXX PPLS R +RELG E R+ RTR + +E ++ H LGLLS GK+ L+S+LA RE G R + APP P +GGA P L M A RED++A LR + PP P+LP C DLRVPK + +A QH L+ DA+ RE LL A F+ Q VEN INA+WV++ K DEYGWP K KARLVARGDMQR IDFGE+FAPTV+VSSVRLLA++ACE L++ H DI+QAFV +ELE DV+MRLP+GCG +SGL+V+L KSLYGLKQASR WHA L RCLL L F QCLADACVFRL+E+ V++ +VV VDDIF+VG++ R ++F +L MVPV+NLG LRWYS CFY RD E G L ISQ+ FA ELA EYGV+WGKSVPL V VKL DFD +E ++PFREL+GSLMWLA QTRPDI NAVRAVARYCA PK++HW+AA +LGYV+RTS +GI+F++G +TG+S+ F DAD+AS A DRRS SGG+VMCGGG V+WFSRTQKCVT STTEAEYVA+ DV KEVLF+RQVWRF++P+A
Sbjct: 324 GPPSLSHALAIFAPGGPAFTVGKPTSTIDINLFHASTGHVNEFLMRETAKQQGVQLVGELQPCVGCIEAKGRRAPVPRRGVTRAAVPFGKVHIDITGPYSEAFDGSRYLIMFVDSASRWQRAYGMRAKSDTLTYTRRFLADLN--GNGPLGCFRMDNAGEFTSAAFVAFCDAAGIRREYTAPDTPKQNAVVESAIWRAMKGGHAARRHVLSM-GHFDLASIPGMDANGHRLWLASAIWASGCFNRSATSGNPAWMSPFEAFFGRKPPLKVVPFFQEGMMRVKRASKADVQSVRCFYLHGARNHSDATAVVLRADTGRICLSNNVVWINRRTAVPAPVPASGXXXXXXXXXXXXXXXXXXXXXXXXXWTSRTYTHTPPTAXXXXXXXXXXXXASPSIFTGSGAPSPISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPLSHRAVRELG------EKETRVHGRTRGDRVRFMDEQQQPPSPSGGGTALQHRLGLLSMMGKDALVSSLA-------TREAVDQGRRDLPPSANIAPPSPPPPQDTSLVGHGSGGAXXXXGPGGLHMFAAMFATREDVEATLRAKRPPDKTPDLPHCLASDLRVPKTFKEAMRS--QHSELWDDAVGRESFVLLDACPFSPVL-QPVENFINAKWVFNCKADEYGWPTKFKARLVARGDMQRASIDFGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEE--DVFMRLPRGCGRLSGLIVKLYKSLYGLKQASRHWHAHLTRCLLLLGFVQCLADACVFRLMEDICVIMIIVVPVDDIFAVGQK-RCDKFGSDLNDMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGISMQVFLDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDA 1337
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5L6V8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V8_9PHAE) HSP 1 Score: 823 bits (2126), Expect = 6.000e-271 Identity = 501/1088 (46.05%), Postives = 625/1088 (57.44%), Query Frame = 3
Query: 1290 VGSQRKKFDINYYHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPR-TGGRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPL---------------SGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAA-----------PARGLPPLSQRVIRELGWG-QAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVAT--GGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYHRNIVMNL 4463
+GS K DI+ +H HA E LLR+ +++ + LTG L C C+ K RR SVPR G RAS+P HVDLCG VP+L G++YL + SA R+ VYGLR+KSD A + + D+ +Y + C+R+D GTEWT FR FC GI +E T PQ N VESAIWRI+K RRS + + DF+ G+D RGDRLW+ +K+ + +N+ +TKANPG SP + FTG + VLPFFQPG MR+ RR+KLDDQ C +L G NH TV VLKAS+GRV +T ++ WV + A + + P XXXX XXXXXX P+P XXXXXXXXXX P +PPL+ +R+L G +A M + RL SRTRSG RH GL+S + L+S L + ++ R + G G A A P+A LA REDIDA LRDQ PP RP+LP C DLRVPK+Y +A + HRHL+ D+M R F+GLL AGTF A ++LA++ACEL L++YH DI+QAFV +ELE DVYMRLP+GCG +SG++V+L KSLYGL+QASRQWHA LKRCL++L FEQC+ADACVFRLIE+G VVL LVVHVDDIF+VGERER C +LG +L + YGV G++VP+ GVKL DFD+DE + + PFR+L+GSLMWLA QTRPDI NAVRAVARYC+ PK +HW+AA +LGY +RTS GIS Q+ ++ G S+ G+ADADFAS A DRRS SGG+V CGGGAVSWFSRTQKCVT STTEAEYVALGDV ++LF+ Q+W F++P+ MPCIPV+EDN+G I L NP+SNSNSKHIDV HHFLREL ER+EI VIHVP YQ AD LTK+L D E H + VMNL
Sbjct: 355 LGSTEKSVDIDRFHRSLAHACEPLLRETDQQRGIMLTGKLVPCTDCMRAKGRRGSVPRGPGARASKPFGRVHVDLCGPLVPSLGGNLYLFVAVASALRWNKVYGLRRKSDALAATKRLLADVGRYDLGRIECVRVDNGTEWTRGDFRRFCDDNGIGIESTPPGVPQYNGVVESAIWRIMKAGMAVRRSAGRVLNV-DFTSISGLDERGDRLWMELAKWAADAVNQLATKANPGRRSPHEIFTGEQGPFRVLPFFQPGFMREDRRTKLDDQATLCYYLNGGDNHPSGTVKVLKASTGRVVYTNNVSWVTSAPAGEGGSAGITAAPTPPPFTPPVVSINFGPAXXXXXXXXXXXXXXXXXXXXXAASSTPXXXXXXXXXXXXXXXXXXXXSATSPSPSATXXXXXXXXXXXXXXXXXXXXDQXPPPPDPAMPPLTAHALRQLRPGTKAEGMTDPRLPSRTRSG--------TRHSTGLISMLDRNTLVSMLEARSAVDKERRELGGAEAGXXXXXXXXXXXXXLAAVDPAAAGAGFPLAFATLLANREDIDATLRDQRPPEQRPDLPHCQASDLRVPKSYKEAMASE--HRHLWSDSMQRGFYGLLEAGTFTPA----------------------------------------------------------KMLAALACELNLDLYHFDIEQAFVRSELEE--DVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFAVGERER----CDKLGA------------------------------------DLNKVYGVVGGENVPMSSGVKLPDFDADEMETDYPFRQLVGSLMWLATQTRPDIANAVRAVARYCSSPKQVHWDAAIGILGYARRTSHFGISLQRRTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVNDMLFLSQIWHFMLPQVGMPCIPVFEDNQGAIQLVQNPISNSNSKHIDVWHHFLRELEERKEISVIHVPLPYQRADILTKSLPTDTPESHVDFVMNL 1331
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE) HSP 1 Score: 777 bits (2006), Expect = 1.720e-251 Identity = 456/1048 (43.51%), Postives = 579/1048 (55.25%), Query Frame = 3
Query: 1326 YHHCSGHAGEFLLRDQAKKQDVELTGNLETCVPCVAIKARRASVPRTG-GRASEPGHTYHVDLCGGFVPALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLPPLSQRVIRELGWGQAGVMPEVRLRSRTRSGGKKGSEEVRRHELGLLSFAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRWYSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSNSNSKHIDVRHHFLRELVERQEIEVIHVPSAYQHADFLTKALAKDAFEYHRNIVMNLE 4466
+H +GH EFL+R+ AK+Q V+L G L+ CV C+ + +RA VPR G RA+ P H+D+ G + A GS Y++ +DSASR+ YG+R KSDT T + + DL G + C R+D E+T+ F FC AGIR E+TA TP+ NA VESAIWR +KG RR V + G D + PG+D G RLWLAS+ + C NR +T ANP MSPF+AF G KP V+PFFQ GMMR R SK D Q+V C +L+ NH +T VL+A +GR+C + ++VW+ R A P SG G AA +PA +R + Q P G +H LGLLS GK+ L+S+LA RE G R + APP PP + HG A+A G H M A + + H DI+QAFV +ELE DV++RLP+GCG +SG++V+L KSLYGLKQASRQWHA L RCLL L F +CLADACVFRL+E+G V++ +VVHVDDIF+VG++ER ++F +L MVPV+NLG LRWYS CFY RD E G L ISQ+ FA ELA EYGV+WGKSVPL V VKL DFD +E ++PFREL+GSLMWLA QTRPDI NAVRAVARYCA PK++HW+AA +LGYV+RTS +GI+F++G +TG+S+ F DAD+AS A DRRS SGG+VMCGGG V+WFSRTQKCVT STTEAEYVA+ DV KEVLF+RQVWRF++P+A MPCIPV+EDN+G I +A+NP++NSNSKHIDVRHHF+RELVER+EI + HV S +QHADFLTKA++K++F HR+ VMNL+
Sbjct: 563 FHASTGHVNEFLMRETAKQQGVQLVGELQPCVGCIEAEGKRAPVPRRGVTRAAVPFGKVHIDITGTYSEAFDGSRYVIMFVDSASRWQRAYGMRAKSDTLTYTRRFLADLN--GNGPLGCFRMDNAGEFTSAAFVAFCDAAGIRREYTAPDTPKHNAVVESAIWRAMKGGHAARRHVLSM-GHFDLASIPGMDANGHRLWLASAIWASGCFNRSATSANPAWMSPFEAFFGRKPPLKVVPFFQEGMMRVKRASKADVQSVRCFYLHGARNHSDATAVVLRADTGRICLSNNVVWINRRTAVPAP----------------------------VPASGGGS---------------------------------------SVTAAPSPAAAXXXXXXDRVRFMDEQQQPPSPS-------------GGGTALQHRLGLLSMMGKDALVSSLA-------TREAVDQGRRDLPPSANIAPPA-----------------------------------PPPPQDTSLAGHGSG-----GAARAGGPGGLHMFAPMFATREDXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLCHFDIQQAFVQSELEE--DVFLRLPQGCGRLSGMIVKLCKSLYGLKQASRQWHAHLTRCLLLLGFVRCLADACVFRLMEDGCVIMIIVVHVDDIFAVGQKERCDKFGSDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDFVMNLQ 1472
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Match: A0A6H5K9I1_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9I1_9PHAE) HSP 1 Score: 738 bits (1905), Expect = 1.970e-243 Identity = 451/972 (46.40%), Postives = 557/972 (57.30%), Query Frame = 3
Query: 1527 PALCGSVYLMAVLDSASRFTLVYGLRQKSDTTTALQLAMTDLRKYGKHDMSCLRLDMGTEWTNRIFREFCARAGIRLEFTAAHTPQQNAPVESAIWRIVKGATTCRRSVKELFGITDFSVFPGIDVRGDRLWLASSKYMCECLNRCSTKANPGNMSPFQAFTGAKPDSIVLPFFQPGMMRDIRRSKLDDQNVACNFLYHGYNHGRSTVAVLKASSGRVCFTKDIVWVARSAA--SXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPLAPLSGTGEPPATGSLLPPXXXXSXXXXXXETAEPAPXXXXXXXXXXXXXGAAAAPARGLPPLSQRVIRELGWGQAGVMPEVRLRSRTRS-------------------GGKKGSEEVRR----HELGLLS--------FAGKEVLLSALAGENVLESLREQKIGGTRGQGEMQSNAPPIRTPVATGGAQPSVPVALVMRLAQREDIDAALRDQLPPHDRPELPLCHGKDLRVPKNYAQATGEDYQHRHLFMDAMDREFHGLLGAGTFAVAN*QSVENCINAQWVYDWKCDEYGWPKKVKARLVARGDMQRQYIDFGEVFAPTVAVSSVRLLASMACELGLEIYHADIKQAFVNAELEPGIDVYMRLPKGCGGMSGLVVQLAKSLYGLKQASRQWHARLKRCLLSLRFEQCLADACVFRLIENGRVVLTLVVHVDDIFSVGERERYERFCRELGMMVPVENLGPLRW----------------YSGCFYTRDREAGRLTISQENFALELAEEYGVDWGKSVPLGVGVKLGDFDSDEEDVEMPFRELIGSLMWLAMQTRPDITNAVRAVARYCAHPKLLHWEAARDVLGYVKRTSSLGISFQKGSITGLSILGFADADFASVATDRRSTSGGVVMCGGGAVSWFSRTQKCVTTSTTEAEYVALGDVTKEVLFVRQVWRFLIPEATMPCIPVYEDNEGTISLANNPVSN 4295
P+L GS +++ +DS SR+ +YG+R+KS T ++ + D+ G R+D G E+ R F FC AGIR +TA TPQQN P ESAIWR+ K R LF DF+ PG G+RLWL S + NR TKAN G SP + FTG+ P ++PF QPG +R R K+D Q V C +L +G NH S V VLK ++GRVC T ++VWV+ A + PL P S PP + + + X XXXXXX XXXXXXX XX AAAP + G + VRR H L S K LS L ++++ R++ I + G + R T G + VP A LA REDID A+RD PP P+LP C+ DLR P E+ I A+WV+DWK DEYGWP VK+RLVARGDMQR ++D GE +APTVAVSSVRLLA+MACE L + H DIKQAFV ++L+ DV+MRLP+GCG +SG++V+L KSLYGLKQASRQWH+ L RCL+ L F QC+AD CVFRLIE GRVV+TLVVHVDDIFS+GE ER ++F R+L +VPV+NLG LRW YSGCFY RD +AG L ISQ+ +A EL E+GV++GK +PL VG+KL +FD DEE V PFRELIGSLMWLA QTRPDI NAVRAVARYCA P +HW A +LGYV RTS LG++F++GS+ LS+ FADAD+AS A DRRS SGG+VMCGGG +SWFSRTQKCVT STTEAE+V L DV KEVLF+RQVWRF++PEA MPCIPV+EDN+G I LA NP+SN
Sbjct: 3 PSLGGSFFMIMFVDSFSRWMKLYGMRRKSYTLAFVKTFLADMSVTGVPRY--FRMDNGGEFIGRDFIAFCDNAGIRRTYTAPGTPQQNGPAESAIWRVNKAGHAARLEAPRLFPKIDFTRVPGFGRDGERLWLESCHWAAGGFNRSPTKANVGYKSPHELFTGSPPPLQIVPFLQPGYVRVTRARKMDPQAVLCCYLNNGDNHHESAVKVLKFATGRVCMTNNVVWVSDRAPLLTPPLELPAPADEGGDSNVAAAPFLIEYISPPLLPPSPYARPPTSPAAILSQAPXXXXXXXXXXXXXXXXXXXXXXTAXXATPLAAAPLFTIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHRAACTAVRRRATFHHCRLASGLTVHHRRCTDKATFLSTLTTRSIVDGGRKE-IPSSAGGRDGAEPGGREREGTKTEGLREEVPFACATLLASREDIDRAMRDLDPPEVAPDLPQCYASDLRQP------------------------------------------ESVIKAKWVFDWKSDEYGWPTNVKSRLVARGDMQRVHVDCGETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDE--DVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERCDQFGRDLNTLVPVKNLGDLRWXXXXXXXXXXXXXXXXYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPIEIHWRAGIGILGYVVRTSDLGVTFRRGSVARLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEHVTLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISN 927 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12054.1730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig12054.1730.1 >prot_L-elsbetiae_contig12054.1730.1 ID=prot_L-elsbetiae_contig12054.1730.1|Name=mRNA_L-elsbetiae_contig12054.1730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=803bp MDFFPPAPPGGDPSDPPPPSSGGGGGGGAPWIASQPTGTAGVVTLNASTLback to top mRNA from alignment at L-elsbetiae_contig12054:1212..5841+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig12054.1730.1 ID=mRNA_L-elsbetiae_contig12054.1730.1|Name=mRNA_L-elsbetiae_contig12054.1730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4630bp|location=Sequence derived from alignment at L-elsbetiae_contig12054:1212..5841+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig12054:1212..5841+ >mRNA_L-elsbetiae_contig12054.1730.1 ID=mRNA_L-elsbetiae_contig12054.1730.1|Name=mRNA_L-elsbetiae_contig12054.1730.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4818bp|location=Sequence derived from alignment at L-elsbetiae_contig12054:1212..5841+ (Laminarionema elsbetiae ELsaHSoW15)back to top |