mRNA_L-elsbetiae_contig12034.1724.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig12034.1724.1
Unique NamemRNA_L-elsbetiae_contig12034.1724.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: A0A6H5JJN5_9PHAE (USP domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJN5_9PHAE)

HSP 1 Score: 428 bits (1100), Expect = 7.070e-137
Identity = 206/234 (88.03%), Postives = 220/234 (94.02%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTRHPAPTPAVARTTPPA 702
            QEDAHEFLRHLLDKMVDC LKRKGVKSSAP+RLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSM+LSRGVRS++VAL+RF+ TERLG+GNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVF RKA K++DH+ FAD LNL VSGPERSA YDLTGVVVHAGGSMSSGHYYAYVR+CAG+W RMDDCSVSKVKRETVLRDQAY+LFYTR PAP P VA + PPA
Sbjct:  369 QEDAHEFLRHLLDKMVDCYLKRKGVKSSAPSRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIEVALRRFVATERLGSGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFTRKASKIKDHIQFADVLNLSVSGPERSALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWARMDDCSVSKVKRETVLRDQAYVLFYTRRPAPQPVVA-SIPPA 601
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: D8LD98_ECTSI (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD98_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 9.700e-100
Identity = 159/233 (68.24%), Postives = 185/233 (79.40%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMEL----SRGV----RSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTRHPAPTP 675
            QEDAHEFLRHL+DKM    L+R+GV   APNRLAETTPI+R+FGGYLRS+LKC++CG CSDTFDPFMDL+M +    S GV    RS+  AL+RF   E LGAGNEW+CGGC K V+AEK+LSVFKPPNALV QLKRF F     KV+DH+SF D LNL+VSGPER A YDLTGVVVH+G +MSSGHYYAYVR+ AG W RM+D  V+KV  +TVLRD+AY+LFYTR P P P
Sbjct:  238 QEDAHEFLRHLVDKMAGSYLERRGVDPFAPNRLAETTPIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVKDHISFGDKLNLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMNDSVVTKVTLDTVLRDKAYVLFYTRRPPPAP 470
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: A0A6H5JKG0_9PHAE (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG0_9PHAE)

HSP 1 Score: 300 bits (769), Expect = 1.390e-91
Identity = 155/252 (61.51%), Postives = 181/252 (71.83%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMEL----SRGV----RSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSK-------------------VKRETVLRDQAYLLFYTRHPAPTP 675
            QEDAHE LRHL+DKM    L+R+GV   A NRL ETTPI+R+FGGYLRS+L+C+KCG CSDTFDPFMDL+M +    SRGV    RS+  AL+RF   E LGAGNEW+CGGC K V+AEK+LSVFKPPNALV QLKRF F     KV DH+SF D LNL+VSGPER   YDLTGVV+H+G +MSSGHYYAYVR+ AG W RM+D  V+K                   V  +TVLRD+AY+LFYTR P P P
Sbjct:  299 QEDAHELLRHLVDKMAGSYLERRGVDPFASNRLGETTPIHRVFGGYLRSQLECSKCGFCSDTFDPFMDLAMNVEKVDSRGVAMKERSLQAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGFTNGPRKVNDHISFGDKLNLEVSGPERWTNYDLTGVVIHSGKTMSSGHYYAYVRSSAGCWARMNDSVVTKDQGQLNPSSTRTRSLACIQVTLDTVLRDKAYVLFYTRCPVPAP 550
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: A0A835YLY7_9STRA (USP domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY7_9STRA)

HSP 1 Score: 267 bits (683), Expect = 1.180e-84
Identity = 123/228 (53.95%), Postives = 165/228 (72.37%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTRHPAPTPAVA 684
            QEDAHEFLR L+D M +  L+R GVK++AP+RL ETT INR+FGGYLR++++CTKC +CS+T++ +MDLS+++   + S++ ALKRF   E L + N WRCGGCK+ V A K L++   PNALVL LKRF + R++ K+R HV++ + L+LKVSGPE+   YDL GVVVH GG+M  GHY+AY+R    +W RMDD  V   ++   L  QAY+LFYTR P P  A A
Sbjct:   99 QEDAHEFLRKLVDSMAEAILRRHGVKANAPHRLDETTAINRVFGGYLRNQVQCTKCRYCSNTYELYMDLSLDMVGNISSLEDALKRFQAVETLDSSNRWRCGGCKQKVCARKQLTIHTAPNALVLHLKRFAYGRQSTKIRRHVAYPEHLDLKVSGPEKRVGYDLCGVVVHEGGTMQFGHYFAYIRASNKLWYRMDDAHVKSTRKSRALEQQAYMLFYTRTPDPAAAAA 326
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: K8ZBR0_NANGC (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZBR0_NANGC)

HSP 1 Score: 241 bits (614), Expect = 6.380e-72
Identity = 119/230 (51.74%), Postives = 157/230 (68.26%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTR-HPAPTPAVAR 687
            QEDAHEFLRHLLD +   CL+   VKS+AP RLAETT ++RIFGGYLRS+++CT+CGHCS+T+D F+DLS+E+   V  ++ AL RF   E L   N WRC  C + V A+K LS    PN   +QLKRF+F  ++ K+  +V++ ++L L +SGPE SA Y L GV+VHAG S++ GHYY+ V+   G W  MDD  V +V   TVL   AYLLFY +  P+P PA+ R
Sbjct:  252 QEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPPPALDR 481
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: A0A4D9CS17_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CS17_9STRA)

HSP 1 Score: 242 bits (617), Expect = 4.150e-69
Identity = 119/230 (51.74%), Postives = 159/230 (69.13%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTR-HPAPTPAVAR 687
            QEDAHEFLRHLLD + + CL+   VKS+AP RLAETT ++RIFGGYLRS+++CT+CGHCS+T+D F+DLS+E+   V  ++ AL RF   E L   N W+C  C + V A+K LS    PN   +QLKRF+F  ++ K+  +V++ ++L L +SGPE SA Y L GV+VHAG S++ GHYY+ V+   G W  MDD  V +V   TVLR  AYLLFY +  P+P PA+ R
Sbjct:  252 QEDAHEFLRHLLDALQNGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWKCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLRQHAYLLFYVKVGPSPPPALDR 481
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: W7TEV7_9STRA (Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEV7_9STRA)

HSP 1 Score: 241 bits (614), Expect = 1.440e-68
Identity = 119/230 (51.74%), Postives = 157/230 (68.26%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTR-HPAPTPAVAR 687
            QEDAHEFLRHLLD +   CL+   VKS+AP RLAETT ++RIFGGYLRS+++CT+CGHCS+T+D F+DLS+E+   V  ++ AL RF   E L   N WRC  C + V A+K LS    PN   +QLKRF+F  ++ K+  +V++ ++L L +SGPE SA Y L GV+VHAG S++ GHYY+ V+   G W  MDD  V +V   TVL   AYLLFY +  P+P PA+ R
Sbjct:  252 QEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETTFVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRANRWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPEGSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFYVKVGPSPPPALDR 481
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: A0A7S3HAX9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAX9_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.410e-58
Identity = 103/218 (47.25%), Postives = 145/218 (66.51%), Query Frame = 1 
Query:    4 EDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTR 657
            EDAHE+LR LLD M +  LK +GVK+S   ++AET+ I+R+FGGYL + L C +C + S TF+ F+D+S+++++GV+S+  A+  F   E L AGNEW+C  CK+ V+A+K + + K PN LV+ LKRF +     K+   V F+  + L   G +  A Y+L GVVVH G S  SGHY AYV+   GVW+ M+D  VS V  +TVL  QAY+LFY+R
Sbjct:    1 EDAHEYLRQLLDCMHEEVLKARGVKTS-DGKIAETSMISRVFGGYLCNTLTCGQCQYVSKTFNHFLDMSLDINQGVKSIGGAIDAFTKPEYLSAGNEWKCEKCKQKVKAKKQMVIHKLPNVLVIHLKRFSYGNMFAKITKPVQFSAEM-LVPYGEKGKAKYELYGVVVHHGHSTHSGHYIAYVKASNGVWHEMNDSHVSVVSVQTVLSCQAYILFYSR 216
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: A0A7S1U5Y3_9STRA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U5Y3_9STRA)

HSP 1 Score: 195 bits (496), Expect = 2.540e-55
Identity = 99/227 (43.61%), Postives = 138/227 (60.79%), Query Frame = 1 
Query:    1 QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKAC-----KVRDHVSFADTLNLKVSGPE---RSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVSKVKRETVLRDQAYLLFYTR 657
            QEDAHE+LR LLD +   CL R G+K +A  R  ET+ ++R+FGGYLRS+LKC  C +CS+T+D  +DLS+E+   V S+  AL+ F   E L   N W+CGGC K V+A K ++VF+ P  L +QLKRF F          K+   + + + L + ++G      +  Y L GVVVH G S++ GHY+AYVR    +W   DD S  +V R+  L  +AY+LFY R
Sbjct:  140 QEDAHEYLRQLLDGLHKSCLMRSGLKPTACGRREETSAMHRLFGGYLRSQLKCNDCAYCSNTYDACLDLSLEIHGKVSSLPSALEAFQAAEILDKDNRWKCGGCNKLVRARKQITVFRAPAVLCIQLKRFSFGFGGGFFGGGKITRFIPYPEVLTVDITGGRARREAVRYRLQGVVVHVGQSVNVGHYFAYVRGANNLWYLKDDSSTQQVPRKEALSQKAYILFYVR 366
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BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Match: A0A1E7FKE1_9STRA (Cysteine proteinase (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKE1_9STRA)

HSP 1 Score: 189 bits (481), Expect = 1.390e-54
Identity = 114/245 (46.53%), Postives = 141/245 (57.55%), Query Frame = 1 
Query:    4 EDAHEFLRHLLDKMVDCCLKRKGVKSSAPN--------RLAETTPINRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMELSR-GVRSVDVALKRFMGTERLGAGNEWRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVF-------------ARKACKVRDHVSFADTLNLKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYV----RNCAGVWNRMDDCSVSKVKRETVLRDQ-AYLLFYTR 657
            EDAHEFL HLLD M D  L+  G+              RL ETT I+R FGGY RS+++C KC + S+T+DPF+DLS+E+S+    SV  AL  F   E L A N+W+C GCKK V A K L+VF+PP +L +QLKRF F                  K+   + F  TLNL +S   RS  Y LTG+V+H GGS  SGHY AYV    R  A  W  +DD  V  V  +TVLR + AYLLFY R
Sbjct:   65 EDAHEFLVHLLDAMNDGELRAAGINQHLSGWRDRLPVTRLNETTFIHRTFGGYFRSQVRCRKCNYRSNTYDPFLDLSLEVSKKSSTSVLNALSEFTRKETLDAANQWKCSGCKKYVCATKQLTVFRPPLSLCIQLKRFAFNSGTNGYKSSKYGGGGGSKISKPIEFPATLNLPLSD-NRSCRYTLTGIVIHVGGSSHSGHYTAYVKKPDRKGASQWYHIDDSDVEPVSEKTVLRQKDAYLLFYCR 308
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig12034.1724.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJN5_9PHAE7.070e-13788.03USP domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LD98_ECTSI9.700e-10068.24Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A6H5JKG0_9PHAE1.390e-9161.51Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ecto... [more]
A0A835YLY7_9STRA1.180e-8453.95USP domain-containing protein (Fragment) n=1 Tax=T... [more]
K8ZBR0_NANGC6.380e-7251.74Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
A0A4D9CS17_9STRA4.150e-6951.74Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Nann... [more]
W7TEV7_9STRA1.440e-6851.74Ubiquitin carboxyl-terminal hydrolase 36 n=1 Tax=N... [more]
A0A7S3HAX9_9STRA4.410e-5847.25Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S1U5Y3_9STRA2.540e-5543.61Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A1E7FKE1_9STRA1.390e-5446.53Cysteine proteinase (Fragment) n=1 Tax=Fragilariop... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig12034contigL-elsbetiae_contig12034:1062..5728 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score432.2
Seed ortholog evalue2.2e-118
Seed eggNOG ortholog2880.D8LD97
KEGG koko:K11855
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0016787,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0070013,GO:0101005,GO:0140096
EggNOG free text desc.ubiquitinyl hydrolase activity
EggNOG OGsKOG1865@1,KOG1865@2759
EC3.4.19.12
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002,ko04121
Exons5
Model size987
Cds size987
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig12034.1724.1prot_L-elsbetiae_contig12034.1724.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig12034 1062..5728 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815404.0736222-CDS-L-elsbetiae_contig12034:1061..14451622815404.0736222-CDS-L-elsbetiae_contig12034:1061..1445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 1062..1445 -
1691682882.9078496-CDS-L-elsbetiae_contig12034:1061..14451691682882.9078496-CDS-L-elsbetiae_contig12034:1061..1445Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 1062..1445 -
1622815404.0892787-CDS-L-elsbetiae_contig12034:2509..26151622815404.0892787-CDS-L-elsbetiae_contig12034:2509..2615Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 2510..2615 -
1691682882.9210074-CDS-L-elsbetiae_contig12034:2509..26151691682882.9210074-CDS-L-elsbetiae_contig12034:2509..2615Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 2510..2615 -
1622815404.1027038-CDS-L-elsbetiae_contig12034:3577..37201622815404.1027038-CDS-L-elsbetiae_contig12034:3577..3720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 3578..3720 -
1691682882.9296043-CDS-L-elsbetiae_contig12034:3577..37201691682882.9296043-CDS-L-elsbetiae_contig12034:3577..3720Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 3578..3720 -
1622815404.11677-CDS-L-elsbetiae_contig12034:4292..44961622815404.11677-CDS-L-elsbetiae_contig12034:4292..4496Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 4293..4496 -
1691682882.9380958-CDS-L-elsbetiae_contig12034:4292..44961691682882.9380958-CDS-L-elsbetiae_contig12034:4292..4496Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 4293..4496 -
1622815404.1354063-CDS-L-elsbetiae_contig12034:5578..57281622815404.1354063-CDS-L-elsbetiae_contig12034:5578..5728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 5579..5728 -
1691682882.9470487-CDS-L-elsbetiae_contig12034:5578..57281691682882.9470487-CDS-L-elsbetiae_contig12034:5578..5728Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig12034 5579..5728 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig12034.1724.1

>prot_L-elsbetiae_contig12034.1724.1 ID=prot_L-elsbetiae_contig12034.1724.1|Name=mRNA_L-elsbetiae_contig12034.1724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=329bp
QEDAHEFLRHLLDKMVDCCLKRKGVKSSAPNRLAETTPINRIFGGYLRSR
LKCTKCGHCSDTFDPFMDLSMELSRGVRSVDVALKRFMGTERLGAGNEWR
CGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFARKACKVRDHVSFADTLN
LKVSGPERSAAYDLTGVVVHAGGSMSSGHYYAYVRNCAGVWNRMDDCSVS
KVKRETVLRDQAYLLFYTRHPAPTPAVARTTPPAASSPSSTPFRVPAAAA
AAAAATSAGKLSAAAAAAAEAKENRRVVVASSGKDPLSGSRSREAGCSGT
SNGNRGGEGSGSAGTCAATELPVSPPPPP
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mRNA from alignment at L-elsbetiae_contig12034:1062..5728-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig12034.1724.1 ID=mRNA_L-elsbetiae_contig12034.1724.1|Name=mRNA_L-elsbetiae_contig12034.1724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4667bp|location=Sequence derived from alignment at L-elsbetiae_contig12034:1062..5728- (Laminarionema elsbetiae ELsaHSoW15)
CAGGAGGACGCCCACGAGTTTCTGAGGCACCTCCTGGACAAGATGGTGGA
CTGCTGTCTCAAGCGGAAGGGGGTCAAGTCCTCGGCGCCCAACAGGCTGG
CGGAGACGACCCCGATCAACCGGATCTTCGGAGGGTACCTCCGCAGTCGG
GTACGGTACATGCAGACGATGTGATACATTCGCACGTCAAGGTAAAGCTA
GTTGAATTATGCGTAAAATCAGATCGTTGAGGCCGTATAAATATGCACAT
GAAGACAAAGCTAGATAAATAATGCTCACATCAGATCGTTGAGGCCGTAT
TTATATGCAAGTCAAGGCAAAGCTAGATAAATTGTGCGTTCGTCAGATCA
TTGAGGCCGTTTCTCATGGGATCGGATTCTCCAAATCGGGATTTTGTTCT
GGCTGCTGAGTATTCACGTACATAGTTGGAACGTAGTGTGGTTATTATCG
GGCCATCGCACTCCGTTGGAGAAATATCCGACACAAAGCTCTCGCCACAC
GCAACGCCCATGCCCCACACGGCTGGCACGCCCAGAGATATCACCATGGA
GCACATGCCTCAAGTGCCCCGATTGCGATCGGTGTGCCTTATGTATGGGC
CGAGAGCTGGGCGGTGCTCAGCTCTTTTCTGCTGACTGCCGAGTATTCAC
GTAATTGGCGCCCAGTGACATTCACGGAATTTCACCTTTTTCGATTCTGG
TTTTCTGCCCTACAGTATAAGGAATGGCCTAAAGCGTGGATCAGATCAAG
CCATTTTTTTTTTTCCATTTTAGTTGTTTTTTTTCCGTGCTTTTTTGCTG
TGGTTGCAACCGGGCACGAAGAGCAGCAGGGTTGTTGTTTGTTGTTGTTG
TTGTTGGTGGTGTTTTGTGGTGGTAGTGGTGTCGATATTGGTTTGGTGGT
TGTGGGTTCGTGGTTGGTCGCCGTTGCAGCTGCTGCTGCTGCTGTTGCCG
GGGATTGTTGGGAAAGTGTGCGGCGACTCAAAAAGGCGGAAGGCGTGGGT
GGGCCACCACTGCAGGACGCACGTGCTTGCCGCTCTCCTCGCTCACGGCA
CCGCGACCTTCCTCCGCGTACAACGACGACGCCATGCAGCACGTTGTTTC
GCTACATAACGATGCCATCATCCTCTCAACCTTCGTTCTGGTTCTTTCGT
GCTGTGTGTCTGCTGCTGCCGCCACCGCTGCCGCCGCCGCTGCTGCTGCC
GCCGCTGCTGCCGCCGCCGCTTGTTTTTCCAGCTCAAATGCACCAAGTGC
GGGCACTGCAGCGACACGTTCGACCCCTTCATGGACCTGTCGATGGAGCT
GTCCCGGGGGGTCCGGTCGGTGGACGTTGCCCTCAAGCGTTTCATGGGGA
CGGAGAGGCTCGGCGCCGGCAACGAATGGCGCTGCGGGGGCTGCAAGAAG
CCGGTGCAGGCGGAGAAAAGTCTCTCTGTCTTCAAGGTGCGCCAGTTTTT
TTTTTGTTACGCTGAATACAGTCGAAAGCTTTTTCGTTTTTTTCAGAAAT
AATTCTTGTAAATATATATATATTTTTTCAATTTCTATTCTATGTATCAA
ACAAATTATTCGGCTTGCGCCCATTGCTGAACACTCCCTATTAGAAGTAG
CCCCGGCTTTCTTAACGATTGCATGGTACGTATGTATGTGTGTATGTACG
GCGCGGCGCCCCCCTCGATCTATTCTTGTGCGTGCGTTGTCGCGGTAGGA
CTCGCAGGGTTTTGTGGGTGGCACACAAGGGTGGGCGAGTTTGTGTGCTG
TGCCTTTCGGCTGAGAGCGTCACACTCTGCCTGCCGTACACGGTGGCACA
CGCCTCTTTCTCTCTGCCTGTGGTGTGCGCAGAAAGGGGGGAGTCATATC
TTGTGGGTTATGTGTGTATATTATTTTGTTGCGCTTGTCAAAACAATCCG
CTCGGAGAAGAGGGCACCGGCCGAGAACCACAGCAACAAATAATCCTGCG
GCACCCCCTAACCCTTTGCTGCGTGCGCCCCCGATGCCACTCTGCTCTCC
GTTTTCAGCCCCCGAACGCGCTGGTCCTGCAGCTCAAGAGGTTCGTCTTC
GCCCGCAAGGCCTGCAAGGTCAGGGACCATGTGAGCTTTGCCGACACCCT
AAACCTCAAGGTCTCGGGTCCGGAGCGGTCTGCGGCGTACGACCTTACTG
GGTGAGTTCAGAGACTCGTTCCGCTTGTTCACACCGTATATATTAATTAC
TTCGACTCCACTACTGTTGACGAGGATGGGGAGTGCTGAACCTTGCTCGC
GATAAATCCACAACACGCAGGCACCGCAGGAGGGGGGTTGCAACCCCCCC
CCCCCCCTCCTGTGTGACCCCGGTTGGGTCGTCTAGCTAGGTAGTCGTGG
TGGAGGAAGGGGGCCAGTGGGGCAGACTACAAATATGCCAATGATAGGAG
GAAAACAAAAAGAAACAAAAAAGAAAAAAAGAAAAAAACAGGCCTGTCCA
GAACTCACGAAAGAGGGGGCTTCTTTGAGTCAGAGCTAGCTGCTCAAATG
GGTCCGCCGCGTGATTTCCCCGTTATGTTTTGTACCTACGGAGAACAATT
TTATTTTCTCCTGCCTCGCCTGCGATTCCGAAATAAATGCCTGCACACCG
TTTCTCTCCCACTGCTACTGGGCCCCTTTCGTGACTATTTACTACTTACT
CCCTGTTCTCTTCTGCGGTACCCCTTTCGAAAGGCTTGCAGAAAAAGGCG
GTGATGGCCGGGCAAGCTTTTGGCTATTATAGTGGCAAAGAAGAGACCCG
ACAGAGTTCGTGTCTGCTTTTGTTGATGCTCCGGTTGATTTGTGTTCTCT
TTTAGTTTGCCCATGTGTCCCTCTACTACTATGTATGTATATATCTTTTT
GGTGTCCGTCTCTCCTATGCCAGATTTGTTGTGCTGCTTCGTCATGCTCT
ATTACGTGACAGCAGTGCTCCACTGCTCGTGTCCTCATTTTTTTGCGCTG
TGACCTGTTCTTTTTTTTATGTCCAGGGTTGTGCTGTTGCTTCCATCACG
TTTTACTCGAAATACATACTCCTATGCGACAATGGCTCCAACTGCTTGCG
TCTTCCTCGTGCCCTCTTTTTGCCCCCGCCTTGTTATATCCTTGTGTTGT
GTGTGCTGTCCAGGGTTGTTGTCCACGCCGGGGGCTCGATGTCGTCCGGG
CACTACTACGCCTACGTGCGAAACTGCGCGGGGGTCTGGAACAGAATGGA
CGACTGCTCCGTGTCGAAGGTGTGTGCTCGATTGTCACGGCCAGCCGGCG
GCGCGCACTTTTAAGCCACCGCCGTCGCTTGGCACCCGGTTTCCCGGCAG
GTTGGAAATCAACCGGGGGGGGGGGGGGGGGGGGGGGGGCAACGCCCACC
CCGAGGCCCGCCCGCGCGGGGGGGGGGGGGTTTTGATTTTCCACAAAATC
AATTTTTTTTTTCCCTCCCNNNNNNNNNNCTCTTCGCGCGCCCCGGGCGG
GGGGGGCGGGGCCGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGCAGGGGGAGCAATGCTCACCACGAGCCGCGCGCGCGCGGGGGG
GGTGTGGTTTCGATTTTCGATACATACATATTTTTTTTTCCCTCCCATTA
TTGGCATACTGGCCCCTTTCCTCCACTACGACTTATCTAGACGACCCAAC
CGGGGTCCCACATGTAGATCGGCCGAAGTTTTGACAACGGAACGCACCGC
CGTGCTTACCTATGTATTTATACCGTTGATTCACACTGGTTGTCTATTTT
GTATGGTACCATATTTTATGTAGGCCTCTTTTCCGGCGGCATTTTTTTTC
TCTGTTTTAGATTACACTCTCTTCGTGGTCTCCACACCTAGATGTATCCA
GTTATCACGCAATATTTAACACTTTTTTTTCCTCCGCAATTTGGAGCTAT
CGTCGGCGGAAGAGGGGAGGCCTATCTATGTATTGTAGCGTATTTTTTCT
TGTGTGGTGCGAAACGCAGAGTTGTGCAGGAGGGGTGATGGGCCTTTTTC
AACATTTTAGGTGTTTTTCTGCTGGGCTCTACCAATATTACGTCACTAAT
ATGTACGAAGTGTATGGATTACCGATGCAATCTCACACGGGAGTCTCGCC
TCCAATGTGGGTTGGGTTCCATTTGCGCTTAACGTTTTTTCTTTCAGAAC
GGCACACGCCCGCTTGCTCGCTCACCGCGTGGTCCCCTTTGTTCCAGTTT
CGAACCCCTCTTCCCCTCTCTTGGATCGCGCACGCACAACACGTGGTGTA
CGTATCGCTGTGTATTCCATCCACCCCACCCAGGTGAAGAGAGAGACCGT
TCTGAGGGACCAAGCGTACCTCCTCTTCTACACGCGGCACCCGGCGCCAA
CGCCTGCCGTTGCCAGGACGACGCCCCCCGCGGCGTCGTCGCCTTCTTCT
ACCCCCTTCCGCGTCCCGGCCGCCGCCGCTGCCGCCGCCGCCGCCACATC
GGCTGGCAAGCTATCGGCAGCCGCCGCCGCCGCCGCGGAGGCAAAGGAAA
ACAGGAGGGTAGTCGTGGCGTCCTCGGGAAAGGATCCCCTCAGCGGATCC
CGCTCGAGAGAAGCGGGATGCAGCGGCACCAGCAATGGCAACCGCGGAGG
TGAGGGGTCCGGCAGCGCAGGGACATGCGCGGCCACGGAGCTCCCTGTTT
CCCCTCCCCCCCCCCCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig12034:1062..5728-

>mRNA_L-elsbetiae_contig12034.1724.1 ID=mRNA_L-elsbetiae_contig12034.1724.1|Name=mRNA_L-elsbetiae_contig12034.1724.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1974bp|location=Sequence derived from alignment at L-elsbetiae_contig12034:1062..5728- (Laminarionema elsbetiae ELsaHSoW15)
CAGGAGGACGCCCACGAGTTTCTGAGGCACCTCCTGGACAAGATGGTGGA
CTGCTGTCTCAAGCGGAAGGGGGTCAAGTCCTCGGCGCCCAACAGGCTGG
CGGAGACGACCCCGATCAACCGGATCTTCGGAGGGTACCTCCGCAGTCGG
CAGGAGGACGCCCACGAGTTTCTGAGGCACCTCCTGGACAAGATGGTGGA
CTGCTGTCTCAAGCGGAAGGGGGTCAAGTCCTCGGCGCCCAACAGGCTGG
CGGAGACGACCCCGATCAACCGGATCTTCGGAGGGTACCTCCGCAGTCGG
CTCAAATGCACCAAGTGCGGGCACTGCAGCGACACGTTCGACCCCTTCAT
GGACCTGTCGATGGAGCTGTCCCGGGGGGTCCGGTCGGTGGACGTTGCCC
TCAAGCGTTTCATGGGGACGGAGAGGCTCGGCGCCGGCAACGAATGGCGC
TGCGGGGGCTGCAAGAAGCCGGTGCAGGCGGAGAAAAGTCTCTCTGTCTT
CAAGCTCAAATGCACCAAGTGCGGGCACTGCAGCGACACGTTCGACCCCT
TCATGGACCTGTCGATGGAGCTGTCCCGGGGGGTCCGGTCGGTGGACGTT
GCCCTCAAGCGTTTCATGGGGACGGAGAGGCTCGGCGCCGGCAACGAATG
GCGCTGCGGGGGCTGCAAGAAGCCGGTGCAGGCGGAGAAAAGTCTCTCTG
TCTTCAAGCCCCCGAACGCGCTGGTCCTGCAGCTCAAGAGGTTCGTCTTC
GCCCGCAAGGCCTGCAAGGTCAGGGACCATGTGAGCTTTGCCGACACCCT
AAACCTCAAGGTCTCGGGTCCGGAGCGGTCTGCGGCGTACGACCTTACTG
GCCCCCGAACGCGCTGGTCCTGCAGCTCAAGAGGTTCGTCTTCGCCCGCA
AGGCCTGCAAGGTCAGGGACCATGTGAGCTTTGCCGACACCCTAAACCTC
AAGGTCTCGGGTCCGGAGCGGTCTGCGGCGTACGACCTTACTGGGGTTGT
TGTCCACGCCGGGGGCTCGATGTCGTCCGGGCACTACTACGCCTACGTGC
GAAACTGCGCGGGGGTCTGGAACAGAATGGACGACTGCTCCGTGTCGAAG
GGTTGTTGTCCACGCCGGGGGCTCGATGTCGTCCGGGCACTACTACGCCT
ACGTGCGAAACTGCGCGGGGGTCTGGAACAGAATGGACGACTGCTCCGTG
TCGAAGGTGAAGAGAGAGACCGTTCTGAGGGACCAAGCGTACCTCCTCTT
CTACACGCGGCACCCGGCGCCAACGCCTGCCGTTGCCAGGACGACGCCCC
CCGCGGCGTCGTCGCCTTCTTCTACCCCCTTCCGCGTCCCGGCCGCCGCC
GCTGCCGCCGCCGCCGCCACATCGGCTGGCAAGCTATCGGCAGCCGCCGC
CGCCGCCGCGGAGGCAAAGGAAAACAGGAGGGTAGTCGTGGCGTCCTCGG
GAAAGGATCCCCTCAGCGGATCCCGCTCGAGAGAAGCGGGATGCAGCGGC
ACCAGCAATGGCAACCGCGGAGGTGAGGGGTCCGGCAGCGCAGGGACATG
CGCGGCCACGGAGCTCCCTGTTTCCCCTCCCCCCCCCCCCGTGAAGAGAG
AGACCGTTCTGAGGGACCAAGCGTACCTCCTCTTCTACACGCGGCACCCG
GCGCCAACGCCTGCCGTTGCCAGGACGACGCCCCCCGCGGCGTCGTCGCC
TTCTTCTACCCCCTTCCGCGTCCCGGCCGCCGCCGCTGCCGCCGCCGCCG
CCACATCGGCTGGCAAGCTATCGGCAGCCGCCGCCGCCGCCGCGGAGGCA
AAGGAAAACAGGAGGGTAGTCGTGGCGTCCTCGGGAAAGGATCCCCTCAG
CGGATCCCGCTCGAGAGAAGCGGGATGCAGCGGCACCAGCAATGGCAACC
GCGGAGGTGAGGGGTCCGGCAGCGCAGGGACATGCGCGGCCACGGAGCTC
CCTGTTTCCCCTCCCCCCCCCCCC
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