mRNA_L-elsbetiae_contig1182.1570.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig1182.1570.1
Unique NamemRNA_L-elsbetiae_contig1182.1570.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: A0A6H5JH06_9PHAE (WW domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH06_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 4.780e-108
Identity = 174/206 (84.47%), Postives = 189/206 (91.75%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPKETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVGWEARVDRNTFTAFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTVYAAHLTR 618
            LKALLNALHQREYNRYYDKLLQLARVSP+ETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGN  RYNPSMARVG+GN+G+QVQAV LQ QVRAALGQT+ E++ RL  VS RM  L++MIGRSLELLR LIKG++HEVP GWEARVDRNTFTAFFVNH+NQTTSL+PPE+P  DSG+ETVAVESMPEYT YA HLTR
Sbjct:  147 LKALLNALHQREYNRYYDKLLQLARVSPEETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNTNRYNPSMARVGTGNIGSQVQAVHLQSQVRAALGQTVQELSDRLGRVSMRMMELREMIGRSLELLRVLIKGVEHEVPRGWEARVDRNTFTAFFVNHDNQTTSLQPPERPAPDSGIETVAVESMPEYTTYAFHLTR 352
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: D7G8X2_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X2_ECTSI)

HSP 1 Score: 340 bits (872), Expect = 3.970e-106
Identity = 175/215 (81.40%), Postives = 189/215 (87.91%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPKETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVGWEARVDRNTFTAFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTV---------YAAHLTR 618
            LKALLNALHQREYNRYYDKLLQLARVSP+ETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGN  RYNPSMARVG+GN+G+QV AV LQ QVRAALGQT+ E++ RLA VS RM  L++MIGRSLELLR LIKG++HEVP GWEARVDRNTFT FFVNH+NQTTSL+PPE+P  DSGVETVAVESMPEYTV         YA HLTR
Sbjct:  211 LKALLNALHQREYNRYYDKLLQLARVSPEETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNTNRYNPSMARVGTGNIGSQVHAVHLQSQVRAALGQTVQELSDRLARVSMRMMELREMIGRSLELLRVLIKGVEHEVPRGWEARVDRNTFTVFFVNHDNQTTSLQPPERPAPDSGVETVAVESMPEYTVRTAESKNQTYAFHLTR 425
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: A0A835ZA49_9STRA (AAA domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA49_9STRA)

HSP 1 Score: 174 bits (440), Expect = 1.460e-46
Identity = 98/207 (47.34%), Postives = 130/207 (62.80%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSP-KETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVGWEARVDRNTFTAFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTVYAAHLTR 618
            L ALLNALH RE+N YY  +L LAR +P     AAWE L+   PHILV APSN AVDN++ R++E+GF+DG  GRYNP +ARVG G  G   + V L+ QV A LG     + RRL  + Q++      +  +L  LRAL   +   +P+GWEARV+  T  A+FV+H+NQ T  E P  P  +    TV +++MPEY +YAA LT+
Sbjct:  359 LVALLNALHVREFNAYYRAMLALARAAPGAAVDAAWEALRRRKPHILVVAPSNAAVDNVLQRVMEKGFMDGTGGRYNPPLARVGRG-AGGVAKGVTLEDQVEAVLGGDGGALQRRLEELRQQLARHLAAVMAALLRLRALHAAVTRPLPLGWEARVNPATNAAYFVDHKNQRTQPEAPAAP-LNPDAATVPLDAMPEYQIYAAQLTK 563
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: A0A7S3UUV3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UUV3_HETAK)

HSP 1 Score: 142 bits (358), Expect = 1.840e-36
Identity = 87/212 (41.04%), Postives = 127/212 (59.91%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARV--SPKETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTIDEI-ARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVGWEARVDRNTFTAFFVNHENQTTS-LEPPEQP---PADSGVETVAVESMPEYTVYAAHLT 615
            L  +LN+LH REYN YY  LL++     S +E    W R+    PHILVTAPSN+AVDNI+ RI+ +GF+DG   RYNP++ RVGSG     V+ ++L+  ++A L Q    I ARR A +++   V  + +    +LL A+++ +   +P GWEARVD   + A++VNH   TTS + PPE+      + G   VA+++M E+ V    LT
Sbjct:   72 LLGMLNSLHLREYNHYYKHLLKVFGTPSSAEELAQQWSRVAERKPHILVTAPSNIAVDNIIQRIMRDGFIDGQGLRYNPTLVRVGSGQT-ESVRDISLEKNIKALLRQEPKAIVARRAALIAEAEAVKAEAVHWQRKLL-AMVQAVPKPLPPGWEARVDEE-YRAYYVNHNTATTSWVFPPEEEYERQKEKGARCVALDAMEEHRVPGGRLT 280
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: B5Y4C8_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4C8_PHATC)

HSP 1 Score: 128 bits (321), Expect = 1.380e-30
Identity = 76/212 (35.85%), Postives = 114/212 (53.77%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPKETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTID--EIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVGWEARVDRNTFT----AFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTVYAAHLTR 618
            L A+LN+LH R+YN+YY+ + ++A        AA +  +   P +LV APSN AVDNI+ +I+E+GF+DG   RYNPSM RVG G  G  V+ VAL+ +V A L + +D   +   +A     +T +   I R    + A+       +   WE R+D +TF      +FVNH    T+ E P  PP + G       +MPEY  + + + +
Sbjct:  567 LVAVLNSLHIRQYNKYYESVRRIATQPTGTRQAALDMARRAKPRLLVCAPSNAAVDNIILKIMEDGFVDGRGQRYNPSMIRVGVGK-GTAVKPVALETKVDAILAENMDAGRLETSIAGYRMELTRISQDIARLRRRVHAMTNASAWPLSKDWEIRIDEDTFDETGKVYFVNHRAHLTTYEAP--PPPEPGETHFPATAMPEYRAFMSRIVK 775
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: A0A1Z5JJ31_FISSO (Senataxin n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJ31_FISSO)

HSP 1 Score: 125 bits (313), Expect = 1.600e-29
Identity = 74/214 (34.58%), Postives = 122/214 (57.01%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPKETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVG----WEARVDRNTFT----AFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTVYAAHLTR 618
            L  +LN+LH R+YN+YY+++ ++A ++     AA E  +   P +L+ APSN AVDN++ +I+ +GF+DG   RYNPSM RVG G   + V+AV+L+ +V A LG+  D  +   + V  ++ + +  I + +  LR  +  +QH  P      WE R+D  +F      ++VNH+ + T+ + P  PP D   +     SMPEY  Y + + +
Sbjct:  492 LVTVLNSLHIRQYNKYYEEVRRIAALTTGSRQAALEIARKAKPRLLICAPSNAAVDNVILKIMADGFIDGQGHRYNPSMIRVGVGQ-SDAVRAVSLEAKVDAILGEYSDISSLEQSIVGFKVELTR--ITQDIASLRRRLHAIQHCSPYSLSKDWEIRIDEESFEDTGRVYYVNHKLKLTTYDLP--PPPDPSEQVFPSRSMPEYRSYLSRIVK 700
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: A0A4D9CTX5_9STRA (WW domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTX5_9STRA)

HSP 1 Score: 122 bits (305), Expect = 1.930e-28
Identity = 71/179 (39.66%), Postives = 97/179 (54.19%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPKETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHE-------VPVGWEARVDRNTFTAFFVNHENQTT 516
            LK LLN+LH REY R+Y  +L +A      T  AW + +   PHILVTAPSNVAVDNIV RI+E+GFLDG   RYNP + R+G      +V+AV+L  QV A L +    +  R       +  L   +  +    R L+K ++         +P GW+ARV+ +    FF     QT+
Sbjct:  580 LKGLLNSLHLREYQRFYKGVLAVAETEDVHTERAWSKYREKKPHILVTAPSNVAVDNIVLRIMEDGFLDGQGRRYNPPLVRMGRFG-SEKVRAVSLDQQVDALLLEPDKSLQNRCLQGRSHLAALTQALVLARHRYRQLVKAMREGGGQGGRVLPYGWDARVEDSGTVIFFAPETGQTS 757
[Close]
BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: A0A7S1YTK4_9STRA (Hypothetical protein (Fragment) n=4 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YTK4_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.520e-28
Identity = 77/214 (35.98%), Postives = 117/214 (54.67%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPK--ETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAAL--GQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVGWEARVDRNTFT----AFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTVYAAHLTR 618
            L AL+N+LH R++N+Y+D++ ++A ++       AA        P ILV APSN AVDN++ +I+E+GF+DGN  RYNPSM R+G G     V+ V L G+V A L  G+ I ++   +A     +  +++ I R    + AL       +   WE R+D  TF      +FVNH+ Q TS E P  PP +  V+     +MPEY  +   + +
Sbjct:  539 LVALINSLHIRQFNKYFDEVRKIAAMTDTVCSNKAALLEAAKGKPRILVCAPSNAAVDNVILKIMEDGFIDGNGCRYNPSMVRIGVGQ-SEAVKDVNLGGRVDALLAEGKDIGKLDAAVAGYRVELGRIQNDIARLRRRVYALNNASPWPLSKEWEMRIDEETFEETGRVYFVNHKEQRTSFEVP--PPPEPDVQHFPATAMPEYRTFMGQIVK 749
[Close]
BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: A0A7S4R098_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R098_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.610e-28
Identity = 77/214 (35.98%), Postives = 117/214 (54.67%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPK--ETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAAL--GQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVGWEARVDRNTFT----AFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTVYAAHLTR 618
            L AL+N+LH R++N+Y+D++ ++A ++       AA        P ILV APSN AVDN++ +I+E+GF+DGN  RYNPSM R+G G     V+ V L G+V A L  G+ I ++   +A     +  +++ I R    + AL       +   WE R+D  TF      +FVNH+ Q TS E P  PP +  V+     +MPEY  +   + +
Sbjct:  575 LVALINSLHIRQFNKYFDEVRKIAAMTDTVCSNKAALLEAAKGKPRILVCAPSNAAVDNVILKIMEDGFIDGNGCRYNPSMVRIGVGQ-SEAVKDVNLGGRVDALLAEGKDIGKLDAAVAGYRVELGRIQNDIARLRRRVYALNNASPWPLSKEWEMRIDEETFEETGRVYFVNHKEQRTSFEVP--PPPEPDVQHFPATAMPEYRTFMGQIVK 785
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BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Match: D0N7H3_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N7H3_PHYIT)

HSP 1 Score: 120 bits (302), Expect = 4.930e-28
Identity = 65/146 (44.52%), Postives = 90/146 (61.64%), Query Frame = 1 
Query:    1 LKALLNALHQREYNRYYDKLLQLARVSPKETPAAWERLKNFAPHILVTAPSNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQVRAALGQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHE 438
            LK LLN+LH REYNRYY+ +L +AR    ET  AW  + N  PHILVTAPSN AVDNIVS+++EEGF DG   RY P + RVG G   N VQ+V L+ QV     Q +D +   +  +   + V++       + LR+++  ++H+
Sbjct:  412 LKGLLNSLHLREYNRYYNAVLDVARRPDNETAKAWAHVGNEKPHILVTAPSNAAVDNIVSKVIEEGFCDGEGRRYFPKIVRVGRGLSAN-VQSVGLENQVDQICSQPLDVLEGHIGRLRHELMVVERDSLMLRDQLRSIVAWIEHD 556
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1182.1570.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH06_9PHAE4.780e-10884.47WW domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D7G8X2_ECTSI3.970e-10681.40WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835ZA49_9STRA1.460e-4647.34AAA domain-containing protein (Fragment) n=1 Tax=T... [more]
A0A7S3UUV3_HETAK1.840e-3641.04Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
B5Y4C8_PHATC1.380e-3035.85Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JJ31_FISSO1.600e-2934.58Senataxin n=2 Tax=Fistulifera solaris TaxID=151956... [more]
A0A4D9CTX5_9STRA1.930e-2839.66WW domain-containing protein n=1 Tax=Nannochlorops... [more]
A0A7S1YTK4_9STRA2.520e-2835.98Hypothetical protein (Fragment) n=4 Tax=Ditylum br... [more]
A0A7S4R098_9STRA2.610e-2835.98Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
D0N7H3_PHYIT4.930e-2844.52Uncharacterized protein n=2 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1182contigL-elsbetiae_contig1182:9560..17442 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score341.7
Seed ortholog evalue2.5e-91
Seed eggNOG ortholog2880.D7G8X2
KEGG koko:K10706
Hectar predicted targeting categoryother localisation
EggNOG free text desc.positive regulation of termination of RNA polymerase II transcription, poly(A)-coupled
EggNOG OGsCOG1112@1,KOG1801@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021
Exons7
Model size619
Cds size618
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815385.1155612-CDS-L-elsbetiae_contig1182:9560..95841622815385.1155612-CDS-L-elsbetiae_contig1182:9560..9584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 9561..9584 -
1691682872.2059412-CDS-L-elsbetiae_contig1182:9560..95841691682872.2059412-CDS-L-elsbetiae_contig1182:9560..9584Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 9561..9584 -
1622815385.1308637-CDS-L-elsbetiae_contig1182:10420..105041622815385.1308637-CDS-L-elsbetiae_contig1182:10420..10504Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 10421..10504 -
1691682872.2199-CDS-L-elsbetiae_contig1182:10420..105041691682872.2199-CDS-L-elsbetiae_contig1182:10420..10504Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 10421..10504 -
1622815385.1420197-CDS-L-elsbetiae_contig1182:11650..117371622815385.1420197-CDS-L-elsbetiae_contig1182:11650..11737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 11651..11737 -
1691682872.227786-CDS-L-elsbetiae_contig1182:11650..117371691682872.227786-CDS-L-elsbetiae_contig1182:11650..11737Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 11651..11737 -
1622815385.1550345-CDS-L-elsbetiae_contig1182:12757..129111622815385.1550345-CDS-L-elsbetiae_contig1182:12757..12911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 12758..12911 -
1691682872.2358084-CDS-L-elsbetiae_contig1182:12757..129111691682872.2358084-CDS-L-elsbetiae_contig1182:12757..12911Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 12758..12911 -
1622815385.1678386-CDS-L-elsbetiae_contig1182:13587..136481622815385.1678386-CDS-L-elsbetiae_contig1182:13587..13648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 13588..13648 -
1691682872.2442532-CDS-L-elsbetiae_contig1182:13587..136481691682872.2442532-CDS-L-elsbetiae_contig1182:13587..13648Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 13588..13648 -
1622815385.1851816-CDS-L-elsbetiae_contig1182:15980..160731622815385.1851816-CDS-L-elsbetiae_contig1182:15980..16073Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 15981..16073 -
1691682872.2549808-CDS-L-elsbetiae_contig1182:15980..160731691682872.2549808-CDS-L-elsbetiae_contig1182:15980..16073Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 15981..16073 -
1622815385.1968234-CDS-L-elsbetiae_contig1182:17327..174421622815385.1968234-CDS-L-elsbetiae_contig1182:17327..17442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 17328..17442 -
1691682872.2711053-CDS-L-elsbetiae_contig1182:17327..174421691682872.2711053-CDS-L-elsbetiae_contig1182:17327..17442Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig1182 17328..17442 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1182.1570.1prot_L-elsbetiae_contig1182.1570.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig1182 9561..17442 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig1182.1570.1

>prot_L-elsbetiae_contig1182.1570.1 ID=prot_L-elsbetiae_contig1182.1570.1|Name=mRNA_L-elsbetiae_contig1182.1570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
LKALLNALHQREYNRYYDKLLQLARVSPKETPAAWERLKNFAPHILVTAP
SNVAVDNIVSRILEEGFLDGNAGRYNPSMARVGSGNVGNQVQAVALQGQV
RAALGQTIDEIARRLAWVSQRMTVLKDMIGRSLELLRALIKGLQHEVPVG
WEARVDRNTFTAFFVNHENQTTSLEPPEQPPADSGVETVAVESMPEYTVY
AAHLTR
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mRNA from alignment at L-elsbetiae_contig1182:9560..17442-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig1182.1570.1 ID=mRNA_L-elsbetiae_contig1182.1570.1|Name=mRNA_L-elsbetiae_contig1182.1570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7883bp|location=Sequence derived from alignment at L-elsbetiae_contig1182:9560..17442- (Laminarionema elsbetiae ELsaHSoW15)
CTCAAGGCCCTGCTCAACGCGCTCCACCAGCGGGAGTACAACCGCTACTA
CGACAAGCTTCTGCAGCTCGCGAGGGTGTCTCCGAAGGAAACCCCCGCGG
CCTGGGAGAGGCTCAGTGAGTCCGCCTTTTGAAAGATAAATCGGTTTTCA
TCAAAAACGGAACTTGTTGGCCGACCTCGCAAATCTTAAATCTTTGCAGG
GGAGATGTTGAACTCTTCTGATATTTTAGGCTGTTTTTCTGCTCGCTTCG
CCAAATATTACGGCACTGTATGGAAAACCGTTTGAACCCCATATCGAGTC
CTTGCTCTAGTGTGGGGTAGGTTCCATCTTTGAATCATTGTTTATTTTTG
TGAAAATGGAACCTCACCAACACTGAGAACGGGCTCCGTCGCGGGGTTCA
ACCTGTGTTGTTCCGCTCTTGTTTTTTATGTTTTTTTAATCCAATTAGTG
GCTTATTCGTCGTCTACTACCCCACTGGCCGGCCCCCTTCCTCCACTACG
ACTAGCTAGACGACCCAATCGGGGTCACACAGGAGGGGGGGTTGGACCCC
CTCCTGTGGTGGCCTGCCTTCCGTCTAGTGACGTGGTGTTCGTCCGGCCG
AGTATGTATCCGAGGAATTCAACATTCTCCCCTGCAGAGCTCTGCCAGGT
CAACCACCATGCACATATTCCGGGGAGATTTTTGTTTTTCCGTGAGATTT
TGTTTTGTCTTGTTTTTCCGTGAGATTTCGTTTTGGCTTGTTTTTTCCGT
AAGATTTTGTTTTGTCTTGTTTTTCCATGAGATTTTGTTTTGTCTTGTTT
TTTCCGTGAGATTTTGTTTTGTCTTGGTTTTCCATGAGATTTTGTTTTGT
CTTGTTTTTCCGTGATATTTTGTTTTGTCTTGTTTTTTCCGTGATATTTT
GTTTTGTCTTGTTTTTGCATTTTTTTTTCGGGACCGGTTTTAGTTTTCTC
TCTCGTTGTGAGGCTTGTTTGCTTGTTTGTGTTTTTTGGGCTAGACTTTT
TTAATGTTTTATTTTATTTTTTTTTATTTTTATTTGTTGTTAGAACGGCT
GAGTGGGTCCGATACTTTCCTTTCGCTCTCTTCTCTGTGGATGTATTTCG
TATTGTAGTAAATTATACATGGAAACATGTTTTTCTTCTTTTTTCCCTCC
CATTATTGGCTTATTCGTCGTCTACCTCACTGGCCTCCATCCTCCACTAC
GACTAGGTCGACGACCCAACCGGGGTGACACAGGAGGGTGAACATGTTTG
TTGGTTATTTCTCTTGCCAATAAATCACTGTACACGTCCGCCGCCTTCCC
CATCCCGCCGACGTCGATCTCACTCCGGTTTACTTCCGCACCTTGTCGTT
CTTTTGCCGGGCTTCGCAGAGAACTTTGCCCCGCACATCTTGGTCACGGC
CCCCTCGAACGTAGCGGTGGACAACATCGTGTCGCGCATCCTCGAGGAGG
GCTTCCTCGATGGTGAGTGGGAGCCTCTGGCGCAACGACGCTTGTTCTTG
TTGTCGCTGTTGTTGTTGAGTTGGTGGTGGTGTTGTTGTTTGTGTTGTTG
GTGTTGTTGTCTAGTCTTCGTTTCGGACGTCTTCCTTGTGATGGTGAGTG
GGCCTCTGGCGCAACGACGCTTGTTGTTGCTGCTGCTGTTGTTGTTGTTG
TTGTTGTTGATGTTGATGTTGAATGAGCCTCCGGCGCAAGGACGTTTGTT
GCTGTTGTTGTCTATAGCAGCCGAAATCAAACCATTAGAGCAGTCAGCGC
TGACTGGGCTAATGGTTTTATTTCTGCTTCTGTTATGTCCAGTTTTTGTT
TCGAACGTTTTCCTTGTGATGCTGAGTAGGCCTCTGGCAAAAGGACACTT
GTGTTGTTGCTGGTGTTGGTGTTGTTGTTGTTGTTGTTGTCCAGTCTTCC
TTGTGATGCCGAGTGAGTGTTTGGCCCGACGACGCTTGTGTTTTTCTGTT
TTCGTCTAGTTCAGTCTTTGGTAGTGTGTACCTTTGCTTGGGTATAAGTT
AGCCTGTGGCCACGAGAATTGACCGCATCAAGTGTTGGATAAGTACGGAC
ACTGATTGGTACTGGATGGAGAGATCGGAACGGTTTTTAATGTGAAGAAA
CAACATACATGCACGTACATACAGTGAGGGAGCGTGTGGCGTAAAGGGCG
CTTGTTTCTTGTTTTTGTCTTGTATAGGTTAGTCTCTGCTGAGAAAGGCC
TCCTTTTGGTGGCGAATTGGTGTGTTGCGCAAGGGCGCTTGCTTGCCTTT
CGCTTGCCTCTTGCTGGTGTTCAGTTGAGCGTTTTTTTTTTTCTTTTATG
TGTGTAGGTACATACACACCGGCACTGAGTGGTCGTTTTTATTTCCGACG
AAGACGCTTGTTTTTTGTTGCGGAAATAGTTTAGCCTCTCTCTCTCTCTC
TCTCTCCGTCTCCATCTGGTCCGTCCGAGACTCATTTTCCATTTTTCCGA
CCAGCACTTAGGTACACTTTTCTCGGGGGTGCGGGGGTTGTTCCGAATTT
CAAAGACACCGGCAAATGCCCTGTCTCCAGGCGCATCTCTCTACGGAAAG
TTTTTTTTGTTTTTGGTTATTGTTTTTCTTTTTTTTCCAAATATCCAGAA
ACATTTGTTCGCTTTTTCCTGCGATTATCACCCATACGATTTCGAAATAG
ACCACGGCAAACGATTCCTCTCTGCATTCCCCAGGGCGTTTTTTTTTCTG
ATTTCGATTTGGATAAAAATCAAGGAAGTTATCGACGAAATACTTGATTT
TAGAGACCATTTTGTTCGTTTTTTCCTGCAAATATCACCCATACGATTTT
GAAATAGACCACGGCAAACGATCCCTCTTGAAATTTCCCAGGGCGTTTTT
TTTTCCGATTTTTGATTAATAGCATGGTTCAGAAGATATTCAACATTTAA
CCCAAAACCCGGATTTTCTCCCAGTCTTGCATTTTTTCAGACACAAAATC
ACTTGAAGTTAGTGTAGGGGTGTAAAAAAATGTTGTCAGAGTCGTTTTTG
TTCGCCTTGTTGTGGGGATCACTAGCACGGCTGAAAGTCCCTCTGAATCG
CTTTTATTCAAAAGTTATCACAAAAAACGTGAATGGACAAATTGTCCCGG
ACGGACCATATCTCTATCTCTATCTCTCTCTCTCTTTCTCTCTCTCTCTC
TCCGTCTCCATCTATCTCTTATCTCCCATCTCTGTCTCTCTCTCTCTATC
TCCGTCTCCATCTATCTCTATCTCTATCTCTGTCTCTTATCTCTGTCTCT
TATCTCTGTCTCCTCTCTGTCTCTCTGTCTCTCTCTCTCGTGCCTCGCCT
TTTCTTTGAAACGTTTACACACACAAAAGGTAACACTCCTGAGCTTTTTG
TTTGTTTGTTGGTCGCATGCGACTCGCTTATCTCCGGAAAACTAACCTTT
CGATGCTGAGGCCTGAAAACCGAACACTCTGTTGGCTGAGTATGGATTAG
GGCTTGCCGTGTTTGGAGTGTTGGAGGCCACGTGTGCAGACTGCACGCGC
ACACCCGGTCTGCTCTAAACGTCGGACCCCTTTTCACACTGCACCTACCC
GGTCTGCACCAAAAGTCAGAGCCCCTCGGCATTTGTGATGCATAGAAGCA
CACCTTAACCTTTCTACATGGTAAAAAAGAGGAGAAACAACTCGATGCGC
CCGCGGGCTTTGTTCCCTGAGCTCAAGACCAACCCCTCATCCCGCCTTCA
CATTTCCGTTTCATTTCACCGCTACTGTACTTAATGTGTTTTTTGTCGGT
GTGATATTCCCTACTACTGTACTGCTGTTATTTTTTGATGACAGGCAATG
CCGGGAGGTACAACCCGTCCATGGCCCGCGTCGGCAGCGGCAACGTTGGC
AACCAGTGAGTATTTATTTACCTGCCTGGCACCAGACTACAGTGCCAAAC
TATTTTTATATTTTATTATGTTCACCCATTATTGACTTATTCGTCGTCTG
CCGCACTGGCCCCCTTCCTCCACTACGACTAGCTAGGCGACCCAATGGGG
TTCACACAGCAGGGGCGCGGGGGGGGTGGACCCCCTCCTTGGATAGTGTT
TGACGACTTGCTCGGTACGGCTTTTTTTTGTTGCCTGAATTGCGCCGGGT
CTTCAGGGTTTTTTCCGCTACGTCACTGCTGGCATGCGCGAGACCACTTG
CACTCCTATACACCACGCCCCCTCCCCCCCCGCCCCCCCTTCAATATCTT
CTTTCTCTGTTGAGCACCCCTTCACACAAAGCACCCTCCTTGAATATCGT
CTTCCTCTGTTGAGCACCCCTATCACACAAAACACCCCCTTAAATGCATT
TTTCTCTGTTGAACGCCCCTTAAATCATCTCACGTAAAACACCAGCCTTG
AATCAACGCGGGTTCTGTCCCTTTTTGAGAAACATCGCAACCGATTGTTC
AAGAAAAGAAAAAGATTCAACCCGTGGTGCCCAAATCAACCGATCCGATC
CCCCGCGCCCCCCGCCCCTTCGCCCTTTGTGCCTATGTCGTCTCTACATG
ACAAAACACAACCTGCTGCGTATCGCACAAGGGTGCAAGCCGTGGCCCTC
CAGGGGCAGGTGAGAGCGGCGCTGGGGCAGACCATCGACGAGATCGCCAG
GCGACTGGCCTGGGTGAGCCAGAGGATGACGGTGCTCAAGGACATGATCG
GCAGGTCGCTGGAGCTGCTGCGGGCCCTTATCAAGGTCTGTGTGTTGTTT
TCAAAGAAAAACGGGTAGATATGTATGTACTGTAATAAAAAATGGAACCT
AACCCTCATTATCTTTTTTTGTTTTTTTCTCGTTTGGTACCGAGCGAGCG
AGGTACTATTTACCGAAACTCAGACGAAGGTTCGAGTAAATTGGGATATG
TAGACTATGTAGTAAATGCATTTTCACGAGGGCATCTCGCCAGAGTATTG
AACCGTGGTCGCACAGAAGGGTTCCTTTCCCCGAGGCCCCCATCTCCCCC
CGTCTGCGTTGCTTGCCTAAGATGTTTTATGGCGAGAAGGGTCCAGCCGT
TCCCTTCCCTCGTCGACGATGAGGTCCAAGTTTGTGGAAATACAGAGGTA
TACCCCGTATTGTTTTCGGTGTTGAGTTACTATCTCTACACCATACTCAG
ACGTGGACCCGAGCGAATAATTTGTGATAGTAAACACAGAGGCATGCTAT
TACCGAGCAAACACAGAGGCATGTTATTTTCGGTATTCATTTTCCATCAC
TGGGCACGGTGAGATATTCTTATTTTCTTCCTCACATGAAACCAGCGCCT
CGTGAATATCGATGCATTCAAGGAAAAAATCACGCATGCAGACACCAAAC
ATTAATACTTCGAAGTATTTCCAAGGAGGATCGATCTATCGATACCAACC
GATGCTCCCCTTACCCCGGGCCAACGCCAAGCAGGTTCTTTTTTTTGAAC
AAATGCTATTCTTGAGATGTCTAAGATATATACGGTATGTCCAACCTGTC
AAAAAGTCGTTCCGGGGGGAATGTTGTAGGCACACTGACCTTTCCTCCTC
ACCGTCCCGAATTTTATTTTTCGGTTCTATATGTACATGTGATTTTTTTT
CTTCACCACACTAAAAAACCAGCGCTCATGAATCGACACTGCATGAGAGC
CTGAAAACACACACTATATGAATATGTACATCTCCGAGAACAATCTGAGA
ATATTCTGTGGAAACCGACAGTGTCTACCCTGGACCCGGAATCGATGTCA
AGCAGGGTTTGCAGCACGAGGTTCCCGTTGGATGGGAGGCAAGGGTTGAC
CGGAACACCTTCACGGCGTTTTTCGTCAACCACGAGAACCAGGTAAGCGC
TCCGTCAATACCGTTCCACTAACTGCCGTACCATACCTTTGAATCATGCT
TCGCGGAAGCCAAGGAAGGACCGGAACACACGTTCGCGGATTTTTTTGCC
AACACCACGATAACCAGGCAAACGCTTTGTCGTGTCAGTCATTTCATTGC
ATGCCGGCCATTTGTACATACCATCTTCTTTTTTTCTTCTTGACATTTCT
TTCCAGTGCTCGATGGGCTCTTTGCCACGAGGGCATCTTGCCAGAGTGTA
CTGAGCCGTGGTCACACAGAAGGGTTCCTTTCCCCGAGGCCCCCGCTCCC
CTGCCTACCACACCATGCTTTTGGAGTACCTGGTATACGGTGTTGGTGCG
GAAGCGAGGGTAGAACCGGGTCGCTTCCACGTCTGGCTTTCCGTCAACCC
ATGAAAGCCAAGCGGGGTTCGATGTCGTGTCGTGACGCTTTTCGTCATGT
CATGCCATGCCTTTGAAGAACCTGGTACTAGCCTGGTACAGTACTGCACG
AAACAAGACAGCAGAACCGGGTTGCGTCCACGTCTGGTTTTCCGTCAACC
CATGAGAGCCAAGCGGGGTTCGATGTCGTGTCGTGACACGTCATGTCATG
TCATAAATAACACTTTTATCTTCCGCGGCGTAGAGTGTGCCTTGTTTTTG
TGACCACGGGCCCCCACGGATGTTTTTGGACTAGATTGGCTAATGTGAGA
AACAACAACAACAATGTCATACCAACAACGTCATACAACAATGTCATACC
ATGCCTTTGAAGAACCTGGTACTAGCCTGGTACAGTACTGCTCGGAAGCA
AGGGTAGGTCTAGGTAAAACTGTAATTTGCCACTGCTGTCTCGGCTTGTT
TTTGTGCACTGCTCACCACCTTGCGCGCTGTGATAACTTAGGGTTAGGGT
GTAAGTCCATTCAGTCTTGCACGCTGTGATAACGTTTGCCGCTGGCGGGG
ACGAAAAGCGAGAGAAAATAACTCACCTCTTGTGCGCGAAAACGTCGCTG
ACGCCGGGGCTCGGACCCCATGACCTGCCTGCTAGAAGGTTTGCGGAGAT
ACCAACTATCAGTCTCTAACGGGGCGATACGTATATGGCTCATTCGGTCT
TGTGCTTTGTGATTGTGTTTGCCGCGTTTTTTGGGCAGACGACGAGCCTC
GAGCCCCCAGAGCAGCCCCCGGCCGACAGTGGCGTGGAAACTGTAGCCGT
GGAATCCATGCCAGAGTACACGGTAAGAATCGTTTTTTTTTTTTCATGTT
CTACTAAATTAAGCATCAGCCGCAGTCTATCTACCACGCCTTACTTTCGC
CATAGAAAAAAATTGCTTTCCAAAGAGGTATTTTTCAGGTGCTGCTGCCG
TCATCGTCGTTTTGAGTCGGTGTTGCTGCTGAGTATGCTTGTTTTATTTG
TTGTTGTTCTTGGCGCTATTGCTGCTACTGCTGCCACTGCTGCTGCTAAT
TTTGTTGTTCTGGTTGTTGCTGTTGTTGTTGTTCTTGGTGCCATTGCTGC
TACTGCTGCTGCTGCTGATGATGTTGTTGTTGTTGTTGTTCTTTTTCTTG
ATGCTACTGCTGCTACAGCTGTCGTTGTTGCTGGTGTTGTTGCCGACGCG
ACGAGAACACCAAGCGATTATTATATATATTTTTCCCCGGGTACTGGGAG
AAGTGTGTAGCCATGCCTCGTTTTGAACCCTCAACCTGACCTCCCTTCGC
GACCTCACCATCATCCATCATAACCCCCAAACAGCGTTTATCGCCATTAT
CATCATCGTCATCAAGCCACCATCCTTGTTAGTATCTCCTTTACCATCCG
CCTGTGTGCAGATTCGTTCAATTTCGGTACACACATAATGTGTGTGTATA
TATATGTAGATAGGTACACACACCCGTCTACGTGTTTGATCAGGCCACTA
TCTTTGTTAGTATTTCCTTTATTACCATCCGCCTATATGCATATTCGTTC
AATTTTGGTACACACATTTTCTACGTGTTTAATCAGTACAAGCTTGTACC
GGCATACACATAAATGTAAACCTGACGAAAACAATACACATGATGGCTGG
CCGTCCAGGTGTACGCGGCCCACCTGACTCGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig1182:9560..17442-

>mRNA_L-elsbetiae_contig1182.1570.1 ID=mRNA_L-elsbetiae_contig1182.1570.1|Name=mRNA_L-elsbetiae_contig1182.1570.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1236bp|location=Sequence derived from alignment at L-elsbetiae_contig1182:9560..17442- (Laminarionema elsbetiae ELsaHSoW15)
CTCAAGGCCCTGCTCAACGCGCTCCACCAGCGGGAGTACAACCGCTACTA
CGACAAGCTTCTGCAGCTCGCGAGGGTGTCTCCGAAGGAAACCCCCGCGG
CCTGGGAGAGGCTCACTCAAGGCCCTGCTCAACGCGCTCCACCAGCGGGA
GTACAACCGCTACTACGACAAGCTTCTGCAGCTCGCGAGGGTGTCTCCGA
AGGAAACCCCCGCGGCCTGGGAGAGGCTCAAGAACTTTGCCCCGCACATC
TTGGTCACGGCCCCCTCGAACGTAGCGGTGGACAACATCGTGTCGCGCAT
CCTCGAGGAGGGCTTCCTCGATGAGAACTTTGCCCCGCACATCTTGGTCA
CGGCCCCCTCGAACGTAGCGGTGGACAACATCGTGTCGCGCATCCTCGAG
GAGGGCTTCCTCGATGGCAATGCCGGGAGGTACAACCCGTCCATGGCCCG
CGTCGGCAGCGGCAACGTTGGCAACCAGCAATGCCGGGAGGTACAACCCG
TCCATGGCCCGCGTCGGCAGCGGCAACGTTGGCAACCAGGTGCAAGCCGT
GGCCCTCCAGGGGCAGGTGAGAGCGGCGCTGGGGCAGACCATCGACGAGA
TCGCCAGGCGACTGGCCTGGGTGAGCCAGAGGATGACGGTGCTCAAGGAC
ATGATCGGCAGGTCGCTGGAGCTGCTGCGGGCCCTTATCAAGGGTGCAAG
CCGTGGCCCTCCAGGGGCAGGTGAGAGCGGCGCTGGGGCAGACCATCGAC
GAGATCGCCAGGCGACTGGCCTGGGTGAGCCAGAGGATGACGGTGCTCAA
GGACATGATCGGCAGGTCGCTGGAGCTGCTGCGGGCCCTTATCAAGGGTT
TGCAGCACGAGGTTCCCGTTGGATGGGAGGCAAGGGTTGACCGGAACACC
TTCACGGCGTTTTTCGTCAACCACGAGAACCAGGGTTTGCAGCACGAGGT
TCCCGTTGGATGGGAGGCAAGGGTTGACCGGAACACCTTCACGGCGTTTT
TCGTCAACCACGAGAACCAGACGACGAGCCTCGAGCCCCCAGAGCAGCCC
CCGGCCGACAGTGGCGTGGAAACTGTAGCCGTGGAATCCATGCCAGAGTA
CACGACGACGAGCCTCGAGCCCCCAGAGCAGCCCCCGGCCGACAGTGGCG
TGGAAACTGTAGCCGTGGAATCCATGCCAGAGTACACGGTGTACGCGGCC
CACCTGACTCGGGTGTACGCGGCCCACCTGACTCGG
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