mRNA_L-elsbetiae_contig11802.1557.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11802.1557.1
Unique NamemRNA_L-elsbetiae_contig11802.1557.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: A0A836C8J4_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8J4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.150e-19
Identity = 39/43 (90.70%), Postives = 43/43 (100.00%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            YMTQVLEGLKYLHDQGVLHRD+KGANILTTK+G++KLADFGVA
Sbjct:   80 YMTQVLEGLKYLHDQGVLHRDVKGANILTTKNGVLKLADFGVA 122
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: D8LLC1_ECTSI (MEKK and related serine/threonine protein kinases amardillo repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLC1_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 5.160e-19
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            YMTQVLEGLKYLHDQGVLHRDIKGANILTTK GLVKLADFGVA
Sbjct:  151 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKRGLVKLADFGVA 193
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: A0A8H8A311_9FUNG (Kinase-like domain-containing protein n=1 Tax=Olpidium bornovanus TaxID=278681 RepID=A0A8H8A311_9FUNG)

HSP 1 Score: 80.5 bits (197), Expect = 1.710e-18
Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            Y+ QVLEGL+YLH+QGV+HRDIKGANILTTK GLVKLADFGVA
Sbjct:   49 YIVQVLEGLRYLHEQGVIHRDIKGANILTTKEGLVKLADFGVA 91
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: A0A453D5E9_AEGTS (Protein kinase domain-containing protein n=2 Tax=Mesangiospermae TaxID=1437183 RepID=A0A453D5E9_AEGTS)

HSP 1 Score: 79.0 bits (193), Expect = 8.730e-18
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            Y+ QVLEGL YLH+QGV+HRDIKGANILTTK GLVKLADFGVA
Sbjct:   58 YIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVA 100
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: I2CPX5_NANGC (Ser thr kinase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CPX5_NANGC)

HSP 1 Score: 80.1 bits (196), Expect = 1.080e-17
Identity = 38/43 (88.37%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            Y+TQVL+GL YLH+QGVLHRDIKGANILTTK GLVKLADFGVA
Sbjct:   83 YITQVLQGLHYLHEQGVLHRDIKGANILTTKAGLVKLADFGVA 125
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: A0A3N4M3L2_9PEZI (Protein kinase domain-containing protein n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4M3L2_9PEZI)

HSP 1 Score: 82.8 bits (203), Expect = 2.170e-17
Identity = 39/43 (90.70%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            YMTQVL+GL YLHDQGV+HRDIKGANILTTK GLVKLADFGVA
Sbjct:  143 YMTQVLQGLLYLHDQGVIHRDIKGANILTTKEGLVKLADFGVA 185
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: A0A421FNE2_9STRA (Protein kinase domain-containing protein (Fragment) n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FNE2_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 2.650e-17
Identity = 37/43 (86.05%), Postives = 40/43 (93.02%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            Y+TQVL GL YLH+QGVLHRD+KGANILTTK GLVKLADFGVA
Sbjct:   55 YITQVLRGLAYLHEQGVLHRDVKGANILTTKDGLVKLADFGVA 97
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: A0A364KKF7_9EURO (Protein kinase domain-containing protein n=1 Tax=Talaromyces amestolkiae TaxID=1196081 RepID=A0A364KKF7_9EURO)

HSP 1 Score: 82.4 bits (202), Expect = 2.960e-17
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            YM+QVL+GL+YLHDQGV+HRDIKGANILTTK GLVKLADFGVA
Sbjct:  526 YMSQVLQGLQYLHDQGVIHRDIKGANILTTKQGLVKLADFGVA 568
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: B6Q277_TALMQ (Serine-threonine kinase SepH n=6 Tax=Eurotiales TaxID=5042 RepID=B6Q277_TALMQ)

HSP 1 Score: 82.4 bits (202), Expect = 2.970e-17
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            YM+QVL+GL+YLHDQGV+HRDIKGANILTTK GLVKLADFGVA
Sbjct:  157 YMSQVLQGLQYLHDQGVIHRDIKGANILTTKQGLVKLADFGVA 199
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BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Match: A0A803R9R6_CANSA (Protein kinase domain-containing protein n=3 Tax=rosids TaxID=71275 RepID=A0A803R9R6_CANSA)

HSP 1 Score: 79.3 bits (194), Expect = 3.110e-17
Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 1 
Query:    1 YMTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA 129
            Y++QVLEGL YLH+QGV+HRDIKGANILTTK GLVKLADFGVA
Sbjct:  124 YISQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVA 166
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11802.1557.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C8J4_9STRA1.150e-1990.70Kinase-like domain-containing protein (Fragment) n... [more]
D8LLC1_ECTSI5.160e-1997.67MEKK and related serine/threonine protein kinases ... [more]
A0A8H8A311_9FUNG1.710e-1886.05Kinase-like domain-containing protein n=1 Tax=Olpi... [more]
A0A453D5E9_AEGTS8.730e-1886.05Protein kinase domain-containing protein n=2 Tax=M... [more]
I2CPX5_NANGC1.080e-1788.37Ser thr kinase (Fragment) n=1 Tax=Nannochloropsis ... [more]
A0A3N4M3L2_9PEZI2.170e-1790.70Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A421FNE2_9STRA2.650e-1786.05Protein kinase domain-containing protein (Fragment... [more]
A0A364KKF7_9EURO2.960e-1788.37Protein kinase domain-containing protein n=1 Tax=T... [more]
B6Q277_TALMQ2.970e-1788.37Serine-threonine kinase SepH n=6 Tax=Eurotiales Ta... [more]
A0A803R9R6_CANSA3.110e-1786.05Protein kinase domain-containing protein n=3 Tax=r... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11802contigL-elsbetiae_contig11802:226..354 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score84.7
Seed ortholog evalue1.1e-14
Seed eggNOG ortholog2880.D8LLC1
Preferred nameCDC15
KEGG koko:K06683
KEGG Pathwayko04111,ko04113,ko04392,map04111,map04113,map04392
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.MAP kinase kinase kinase activity
EggNOG OGsKOG0198@1,KOG0198@2759
EC2.7.11.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size129
Cds size126
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815384.0920694-CDS-L-elsbetiae_contig11802:225..3511622815384.0920694-CDS-L-elsbetiae_contig11802:225..351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11802 226..351 -
1691682871.5661023-CDS-L-elsbetiae_contig11802:225..3511691682871.5661023-CDS-L-elsbetiae_contig11802:225..351Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11802 226..351 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815384.1063454-UTR-L-elsbetiae_contig11802:351..3541622815384.1063454-UTR-L-elsbetiae_contig11802:351..354Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11802 352..354 -
1691682871.5774348-UTR-L-elsbetiae_contig11802:351..3541691682871.5774348-UTR-L-elsbetiae_contig11802:351..354Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11802 352..354 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11802.1557.1prot_L-elsbetiae_contig11802.1557.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11802 226..351 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11802.1557.1

>prot_L-elsbetiae_contig11802.1557.1 ID=prot_L-elsbetiae_contig11802.1557.1|Name=mRNA_L-elsbetiae_contig11802.1557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=42bp
MTQVLEGLKYLHDQGVLHRDIKGANILTTKHGLVKLADFGVA
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mRNA from alignment at L-elsbetiae_contig11802:226..354-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11802.1557.1 ID=mRNA_L-elsbetiae_contig11802.1557.1|Name=mRNA_L-elsbetiae_contig11802.1557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=129bp|location=Sequence derived from alignment at L-elsbetiae_contig11802:226..354- (Laminarionema elsbetiae ELsaHSoW15)
TACATGACCCAAGTCCTGGAGGGGCTCAAGTACCTGCACGACCAGGGTGT
GCTGCACCGCGATATCAAGGGGGCGAACATCCTCACAACCAAGCACGGGC
TGGTGAAGCTCGCGGACTTCGGCGTGGCC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11802:226..354-

>mRNA_L-elsbetiae_contig11802.1557.1 ID=mRNA_L-elsbetiae_contig11802.1557.1|Name=mRNA_L-elsbetiae_contig11802.1557.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=252bp|location=Sequence derived from alignment at L-elsbetiae_contig11802:226..354- (Laminarionema elsbetiae ELsaHSoW15)
ATGACCCAAGTCCTGGAGGGGCTCAAGTACCTGCACGACCAGGGTGTGCT
GCACCGCGATATCAAGGGGGCGAACATCCTCACAACCAAGCACGGGCTGG
TGAAGCTCGCGGACTTCGGCGTGGCCATGACCCAAGTCCTGGAGGGGCTC
AAGTACCTGCACGACCAGGGTGTGCTGCACCGCGATATCAAGGGGGCGAA
CATCCTCACAACCAAGCACGGGCTGGTGAAGCTCGCGGACTTCGGCGTGG
CC
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