mRNA_L-elsbetiae_contig118.1548.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_L-elsbetiae_contig118.1548.1
Unique Name	mRNA_L-elsbetiae_contig118.1548.1
Type	mRNA
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)

Homology

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: D8LIP9_ECTSI (GMP_PDE_delta domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP9_ECTSI)

HSP 1 Score: 377 bits (968), Expect = 9.350e-125
Identity = 184/197 (93.40%), Postives = 193/197 (97.97%), Query Frame = 1

Query:    1 EFMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGNLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYEDRYAGAKGAKKQASKYDSGE 591
            +F+CALSANK+QIEFLEFTISDY TKNIIFMVGRDYPPP+DLDLDLG+LDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGE+EVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLD+DLIEEMIA+PFETKSDSFYFVDDELIMHNKASYKYVPED AQ+KKSYEDRYAGAKG KKQASKYDS E
Sbjct:    4 DFLCALSANKYQIEFLEFTISDYVTKNIIFMVGRDYPPPIDLDLDLGSLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEQEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDEDLIEEMIANPFETKSDSFYFVDDELIMHNKASYKYVPEDTAQAKKSYEDRYAGAKGTKKQASKYDSDE 200

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A6H5L6I3_9PHAE (GMP_PDE_delta domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6I3_9PHAE)

HSP 1 Score: 345 bits (885), Expect = 3.250e-113
Identity = 165/177 (93.22%), Postives = 175/177 (98.87%), Query Frame = 1

Query:    1 EFMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGNLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYE 531
            +F+CALSANK+QIEFLEFTISDY TKNIIFMVGRDYPPP+DLDLDLG+LDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGE+EVPNFRMVERHYFRDQL+KSYDFGFGFCIPASTNTWDAVYQVPPLD+DLIEEMIA+PFETKSDSFYFVDDELIMHNKASYKYVPED AQ+KKSYE
Sbjct:    4 DFLCALSANKYQIEFLEFTISDYDTKNIIFMVGRDYPPPIDLDLDLGSLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEQEVPNFRMVERHYFRDQLIKSYDFGFGFCIPASTNTWDAVYQVPPLDEDLIEEMIANPFETKSDSFYFVDDELIMHNKASYKYVPEDTAQAKKSYE 180

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A835ZCZ8_9STRA (GMP-PDE, delta subunit-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCZ8_9STRA)

HSP 1 Score: 284 bits (727), Expect = 5.840e-89
Identity = 141/197 (71.57%), Postives = 165/197 (83.76%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLD-LDLGNLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYEDRYA----GAKGAKKQASKY 579
            F+C LSAN + IE+L+F+I DY++KN+IF VGRD PP +DL  +DL ++DEN YR IKYEFSEDVLRLPSIQT+LVF VGE EVP FRMVERHYFRDQLVKS+DF FGFCIP+STNTWDAVY VPP+D+ LI +MI +P ETKSDSFYFVD +L+MHNKASYKYV EDAAQ+KKSYE+RY     GA G  K ASK+
Sbjct:   26 FLCPLSANTYGIEYLDFSILDYSSKNVIFNVGRDNPPSIDLSGVDLADIDENLYRSIKYEFSEDVLRLPSIQTTLVFCVGEREVPGFRMVERHYFRDQLVKSFDFTFGFCIPSSTNTWDAVYSVPPMDEGLINDMINNPHETKSDSFYFVDGQLVMHNKASYKYVREDAAQAKKSYEERYGSKRTGAAGGAKAASKF 222

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A7S3YI34_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YI34_HETAK)

HSP 1 Score: 271 bits (692), Expect = 2.370e-83
Identity = 135/199 (67.84%), Postives = 165/199 (82.91%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLD-LDLGNLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYEDR--YAGAKGAKKQASKYDSGE 591
            F+C LSAN + IEF+EFTI DY +K I+F VGRD PPP+D+D +DL N+DEN YR IKYEFSEDVLRLP I T+LVFSVG++ V +FRM+ERHYFR+QLVKS+DF FGFCIP STNTWDA+Y +PP+D+ LI EM+A+P+ET SDSFYFV D+LIMHNKA+YKY+ ED AQ+K+SY+ R   A AKGAK   +KYDS E
Sbjct:   46 FLCPLSANSYGIEFIEFTIYDYESKAILFEVGRDNPPPIDMDNIDLNNMDENMYRKIKYEFSEDVLRLPFISTTLVFSVGDQPVEDFRMIERHYFRNQLVKSFDFTFGFCIPGSTNTWDALYALPPMDEGLISEMMANPYETHSDSFYFVGDKLIMHNKATYKYIAEDRAQAKRSYDGRGSKATAKGAK--GAKYDSDE 242

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A7S0XGT1_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XGT1_9STRA)

HSP 1 Score: 257 bits (656), Expect = 3.730e-78
Identity = 120/179 (67.04%), Postives = 147/179 (82.12%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGNLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYEDRY 540
            F+C LSAN + I+FL FTISDY TK IIF VGRD P P D+ +D  +  ++ YR IKY FSEDVLRLP+IQT+L+FSVG  EV +FRM+ERHYFRDQLVKS+DF FGFCIP S N+W+A+Y++P L + LI +MI +P+ETKSDSFYFVD +LIMHNKASY Y+ EDAAQSKKSYED++
Sbjct:   20 FLCPLSANTYGIDFLNFTISDYETKKIIFEVGRDNPAPPDVTVDFSSYGDDMYRKIKYTFSEDVLRLPTIQTTLIFSVGNREVKDFRMIERHYFRDQLVKSFDFNFGFCIPGSENSWEAIYRIPSLSEQLINDMINNPYETKSDSFYFVDGKLIMHNKASYSYIREDAAQSKKSYEDKF 198

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A7S3MAT2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAT2_9STRA)

HSP 1 Score: 256 bits (655), Expect = 4.310e-78
Identity = 126/187 (67.38%), Postives = 150/187 (80.21%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGNLDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDA-AQSKKSYEDRYAGAKGAK 561
            F+C LS+N   IEFL+FTISDY +KN IF VG+D P P D+ +D   L E+ YR IKY FSEDVLRLP IQTSLVFSVG   +  FRM+ERHYFRDQLVKS+DF FGFCIP STNTWD+VY +PPL ++LI++MI HPFETKSDSFYFV+ +LIMHNKASYKY+ ED+ A  KKSYED+++   GAK
Sbjct:   19 FLCPLSSNNFGIEFLQFTISDYQSKNTIFAVGKDNPTPQDIAVDFSCLGEDMYRKIKYTFSEDVLRLPLIQTSLVFSVGSTPLNGFRMIERHYFRDQLVKSFDFAFGFCIPGSTNTWDSVYSLPPLSEELIKDMIDHPFETKSDSFYFVNGKLIMHNKASYKYIREDSTAGVKKSYEDKFSAKLGAK 205

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A485KU34_9STRA (Aste57867_11859 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KU34_9STRA)

HSP 1 Score: 247 bits (630), Expect = 1.040e-74
Identity = 126/201 (62.69%), Postives = 153/201 (76.12%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGN-LDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYED---------RYAGAKGAKKQASK 576
            F+C +SAN + I+FL+F+I DY +K  IF VGRD PP     +D    LDE+++R I+YEFSEDVLRLPSI TSL FSVG +EV  FRM+ERHYFRD+LVKSYDF FGFCIP+STNTWDAVY VP LD++LI++M+ +P+ T SDSFYFV DELIMHNKA YKY+ ED AQSK+SY D         +  GAKG KK A+K
Sbjct:   21 FLCPMSANVYGIDFLKFSIIDYESKRTIFRVGRDCPPKAASKIDYTQPLDEDSFRKIRYEFSEDVLRLPSIMTSLEFSVGPKEVHGFRMIERHYFRDELVKSYDFTFGFCIPSSTNTWDAVYSVPSLDEELIQDMVNNPYATVSDSFYFVGDELIMHNKAEYKYIVEDRAQSKRSYYDSDDEDSKASKSTGAKGEKKAAAK 221

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A067BR46_SAPPC (GMP_PDE_delta domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BR46_SAPPC)

HSP 1 Score: 245 bits (626), Expect = 4.070e-74
Identity = 118/178 (66.29%), Postives = 143/178 (80.34%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGN-LDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYED 534
            F+C +SAN + I+FL+F I DY TK  IF VGRD PP     +D    LDE+++R I+YEFS+DVLRLPSI TSL F VG +EV NFRM+ERHYFRD+L+KSYDF FGFCIP+STNTWDA+Y VP LD+DLI++M+A+P+ T SDSFYFV DELIMHNKA YKY+ ED AQSK+SY D
Sbjct:   21 FLCPMSANVYGIDFLKFQIIDYDTKRKIFQVGRDCPPRAAAKIDFSQPLDEDSFRKIRYEFSDDVLRLPSIMTSLEFCVGPKEVHNFRMIERHYFRDELIKSYDFTFGFCIPSSTNTWDAIYSVPSLDEDLIQDMVANPYATVSDSFYFVGDELIMHNKAEYKYILEDRAQSKRSYYD 198

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: W4GFH6_9STRA (GMP_PDE_delta domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GFH6_9STRA)

HSP 1 Score: 245 bits (625), Expect = 6.320e-74
Identity = 120/178 (67.42%), Postives = 141/178 (79.21%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGN-LDENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYED 534
            F+C LSAN + I+FL+F I DY +K  IF VGRD PP     +D    LDE +YR I+YEFSEDVLRLP+I TSL FSVG +EV  FRM+ERHYFR++LVKSYDF FGFCIP STNTWDAVY VP LD+DLI++M+A+P+ T SDSFYFV DELIMHNKA YKY+ ED AQSK+SY D
Sbjct:   21 FLCPLSANVYSIDFLKFQIIDYESKRKIFQVGRDCPPRAAAKVDYSQPLDEESYRKIRYEFSEDVLRLPTIMTSLEFSVGGKEVHGFRMIERHYFREELVKSYDFAFGFCIPRSTNTWDAVYSVPALDEDLIQDMVANPYATVSDSFYFVGDELIMHNKAEYKYIVEDRAQSKRSYYD 198

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BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Match: A0A0P1AW27_PLAHL (Photoreceptor synaptic vesicle protein HRG4/UNC-119 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AW27_PLAHL)

HSP 1 Score: 244 bits (623), Expect = 1.380e-73
Identity = 119/193 (61.66%), Postives = 149/193 (77.20%), Query Frame = 1

Query:    4 FMCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGNL-DENAYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKSYDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDDELIMHNKASYKYVPEDAAQSKKSYE--DRYAGAKGAKKQAS 573
            F+C LSANK+ IEFL F+ISD+ +K  IF +G+D P    L ++LG+   E+AYR I+YEFSEDVLRLP+I T L FSVG  EV N RM+ERHYFRD++VKS+DF FGFCIP+S NTW+ +Y +PPLD+ +I +M+A P+ T SDSFYFV DELIMHNKA YKY+PED AQ+KKSY+  D Y  AKG  K+ S
Sbjct:   21 FLCPLSANKYGIEFLHFSISDFESKRKIFEIGKDRPGKATLKMELGHARGESAYRTIRYEFSEDVLRLPAIATELEFSVGSHEVHNLRMIERHYFRDEIVKSFDFNFGFCIPSSLNTWETIYALPPLDEKVISDMVAQPYATVSDSFYFVGDELIMHNKAEYKYIPEDRAQAKKSYDHSDDYDDAKGGAKEGS 213

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig118.1548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIP9_ECTSI	9.350e-125	93.40	GMP_PDE_delta domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5L6I3_9PHAE	3.250e-113	93.22	GMP_PDE_delta domain-containing protein n=1 Tax=Ec...	[more]
A0A835ZCZ8_9STRA	5.840e-89	71.57	GMP-PDE, delta subunit-domain-containing protein n...	[more]
A0A7S3YI34_HETAK	2.370e-83	67.84	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S0XGT1_9STRA	3.730e-78	67.04	Hypothetical protein n=1 Tax=Chromulina nebulosa T...	[more]
A0A7S3MAT2_9STRA	4.310e-78	67.38	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A485KU34_9STRA	1.040e-74	62.69	Aste57867_11859 protein n=1 Tax=Aphanomyces stella...	[more]
A0A067BR46_SAPPC	4.070e-74	66.29	GMP_PDE_delta domain-containing protein n=4 Tax=Sa...	[more]
W4GFH6_9STRA	6.320e-74	67.42	GMP_PDE_delta domain-containing protein n=2 Tax=Ap...	[more]
A0A0P1AW27_PLAHL	1.380e-73	61.66	Photoreceptor synaptic vesicle protein HRG4/UNC-11...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig118	contig	L-elsbetiae_contig118:7507..15244 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	377.5
Seed ortholog evalue	5.3e-102
Seed eggNOG ortholog	2880.D8LIP9
Preferred name	UNC119
KEGG ko	ko:K05291
KEGG Pathway	ko00563,ko01100,map00563,map01100
Hectar predicted targeting category	other localisation
GOs	GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000922,GO:0001558,GO:0001932,GO:0001934,GO:0002119,GO:0002164,GO:0003008,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005929,GO:0006810,GO:0006996,GO:0007049,GO:0007154,GO:0007165,GO:0007267,GO:0007268,GO:0007275,GO:0007399,GO:0007600,GO:0007601,GO:0007602,GO:0007610,GO:0007631,GO:0007635,GO:0008104,GO:0008150,GO:0008289,GO:0008361,GO:0009314,GO:0009416,GO:0009581,GO:0009582,GO:0009583,GO:0009605,GO:0009628,GO:0009653,GO:0009791,GO:0009893,GO:0009987,GO:0010171,GO:0010562,GO:0010604,GO:0010721,GO:0010769,GO:0010771,GO:0010975,GO:0010977,GO:0015031,GO:0015630,GO:0015833,GO:0016043,GO:0019220,GO:0019222,GO:0022008,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0023052,GO:0030030,GO:0030031,GO:0030100,GO:0030154,GO:0030182,GO:0030308,GO:0030424,GO:0030516,GO:0030517,GO:0031323,GO:0031325,GO:0031344,GO:0031345,GO:0031399,GO:0031401,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032535,GO:0032879,GO:0033036,GO:0033674,GO:0035869,GO:0040008,GO:0040011,GO:0040024,GO:0042221,GO:0042325,GO:0042327,GO:0042886,GO:0042953,GO:0042995,GO:0043005,GO:0043051,GO:0043085,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043549,GO:0044085,GO:0044093,GO:0044421,GO:0044422,GO:0044424,GO:0044430,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0044782,GO:0044872,GO:0045171,GO:0045184,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0045806,GO:0045859,GO:0045860,GO:0045926,GO:0045937,GO:0046662,GO:0048259,GO:0048261,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048638,GO:0048640,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050730,GO:0050731,GO:0050767,GO:0050768,GO:0050770,GO:0050771,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050795,GO:0050877,GO:0050896,GO:0050953,GO:0051049,GO:0051051,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051233,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051247,GO:0051301,GO:0051338,GO:0051347,GO:0051606,GO:0051716,GO:0051960,GO:0051961,GO:0060255,GO:0060259,GO:0060271,GO:0060284,GO:0060627,GO:0061097,GO:0061098,GO:0061387,GO:0061640,GO:0065007,GO:0065008,GO:0065009,GO:0070121,GO:0070925,GO:0071702,GO:0071705,GO:0071840,GO:0080090,GO:0090066,GO:0097458,GO:0098916,GO:0099536,GO:0099537,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:1900186,GO:1903047,GO:1903998,GO:2000026,GO:2000241,GO:2000369,GO:2001286,GO:2001287
EggNOG free text desc.	lipoprotein localization
EggNOG OGs	KOG4037@1,KOG4037@2759
COG Functional cat.	S
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001
Ec32 ortholog description	GMP phosphodiesterase, delta subunit
Ec32 ortholog	Ec-25_003230.1
Exons	8
Model size	1774
Cds size	807
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig118.1548.1	prot_L-elsbetiae_contig118.1548.1	Laminarionema elsbetiae ELsaHSoW15	polypeptide	L-elsbetiae_contig118 7513..14283 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622815382.0476646-UTR-L-elsbetiae_contig118:7506..7512	1622815382.0476646-UTR-L-elsbetiae_contig118:7506..7512	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig118 7507..7512 +
1691682870.7232876-UTR-L-elsbetiae_contig118:7506..7512	1691682870.7232876-UTR-L-elsbetiae_contig118:7506..7512	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig118 7507..7512 +
1622815382.1453657-UTR-L-elsbetiae_contig118:14283..15244	1622815382.1453657-UTR-L-elsbetiae_contig118:14283..15244	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig118 14284..15244 +
1691682870.8207755-UTR-L-elsbetiae_contig118:14283..15244	1691682870.8207755-UTR-L-elsbetiae_contig118:14283..15244	Laminarionema elsbetiae ELsaHSoW15	UTR	L-elsbetiae_contig118 14284..15244 +

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at L-elsbetiae_contig118:7507..15244+
coding sequence from alignment at L-elsbetiae_contig118:7507..15244+

protein sequence of mRNA_L-elsbetiae_contig118.1548.1

>prot_L-elsbetiae_contig118.1548.1 ID=prot_L-elsbetiae_contig118.1548.1|Name=mRNA_L-elsbetiae_contig118.1548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=269bp
MCALSANKHQIEFLEFTISDYATKNIIFMVGRDYPPPVDLDLDLGNLDEN
AYRLIKYEFSEDVLRLPSIQTSLVFSVGEEEVPNFRMVERHYFRDQLVKS
YDFGFGFCIPASTNTWDAVYQVPPLDDDLIEEMIAHPFETKSDSFYFVDD
ELIMHNKASYKYVPEDAAQSKKSYEDRYAGAKGAKKQASKYDSGECEGSV
VPCSYEGDEGGDDDRSEDGSTAGGGIRGERKAGGKYDDEEGDSRRGSVES
TGGAGNEDDPWSKEADYY*

mRNA from alignment at L-elsbetiae_contig118:7507..15244+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_L-elsbetiae_contig118.1548.1 ID=mRNA_L-elsbetiae_contig118.1548.1|Name=mRNA_L-elsbetiae_contig118.1548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=7738bp|location=Sequence derived from alignment at L-elsbetiae_contig118:7507..15244+ (Laminarionema elsbetiae ELsaHSoW15)
GAGTTTATGTGTGCGCTCTCGGCGAACAAGCACCAGATCGAGTTCCTCGA
GTTTACCATCAGCGACTACGCTACCAAGAACATTATTTTCATGGTGAGCT
TAATTCGGAGGACATAACACCGTACAAGAAACGCCGACGATGATATACAT
ACCTCAAAACTGCTGAACATTCCGCCTTACTTCAACCGAGCGCCGTCTCG
ATTTCAACTTCCTGACATTGGCCTATCGTATCCCCCACTACTTGAGGTAG
GCCACGATCAGTGGCCCGGTGGCGTCCCCTGCTTTACTGTACAATCTGGA
TCAATTTTTCAACTTGATTATAAACACAGCGAGTTGTCGAAATGCCCGAC
GATTTTAAAACAATGGGGCACCATCTCCTTGGCCAGTAGGCTGAGAGATA
TGTCGAAGGGCATCCCAAAAGAGTAACATAGCCGGGGGGCAGGCTTCAAA
CAGATCCTTGTGCTTCGAGTGGCGGCGTGACAAAAGAGCATTTTTCGTCC
TCTTGGAACGGCTGTAAATATGCGGCCTAAACCCGACCTCAGCCTATGGC
GGCGGACGCCATGACAGGTACGCCCAACCAGAGGCTACGAGGAGACACAG
GTGTACTCGAATAGTACCTTAGAGCAATCTCTGACGTCCTCAGCAGCGGT
AGCAACCCCGTTTTAAAATGGCAGTGACGTTTGCCATGTCGAGAGTTCTA
CAGCGGTCGATTTAGATTTTATACGAAGAACGGAGGGCAGCAAAGGTCCT
ACAGCACCGCTAAATAAACGAAGGTCACGCGATGGTAGCTGTTGTCCTTA
GCTTTCGATAGATATGTTAACCCAGTGACCAAGGAGAATGTGCTTCATTT
TAAATTGCGATGGCGCTTAGGGTAAAAGCGAAAACAGGCAAGACAAAACA
GTTGCGCCGCAAAAAAACCGTCGGTTTTTTGGAGTTCTGCCGACAAGATG
CTGACTACGTCAGGTTTCGCCCGGTGCGGACCACAAAGCACAACATGCCT
CTTCGCCTATTCTGGGGTTTGGCCTTTTCCCCTTAGCCACGTGATCGTGG
CCTACCTTAATATATAAGACCACCACGGAGTATATACCACCGTCATAGTC
TAGTCTAGTCTAGTACCGCGGTGCCTACTTCCTGTTACCCCAAAGATCAT
CGTCAGCAGGTATCCGGCCAAGAAAATAGTATCCCATTAGTCCAAGAATG
AACCACTACAATACTGTCTCTTACAAAATACTACCAAGTCGGGCCGAACA
CCCCACTACTGCTACAAAGCGTGATCAATTTTTTGGACGGCGGGGGTGTC
GTGACTGCAGGTAGGGCGGGACTACCCGCCGCCTGTTGACCTCGACCTCG
ACTTGGGAAACCTGGACGAGAATGCCTACCGCCTCATCAAGTACGAGTTC
TCCGAGGACGTTCTCCGGTTACCGTCTATTCAGGTGAGGTAGATTATCCT
GCGTGCGAGTGCGAGTGCGAGTGTGAGTGCGAGTGCGTGCGTGCGTGTGC
AATCATGTGGTTTTGTATCGGCCTTTATTGAGGGCTTTGTTTTCTCCTTG
ACAGAGTGGAGCACACCCCGCCGAAATGCCGTCGAAAGTTATCGTGAGGT
GAGTTTGTCGACACCAACCTGATTTCTTCCCATGCTCGACGGCCTTCGTG
ACTAACCCGCTGGCACCCCTGGCTCTGTCTGATACCAAAACACGTCAGAC
GCGGGGTTTTTCATCTTTTCGTGGCTGAGCTCCTTAATGTCCTACCCCCA
TATATCTAGTATTGCGTAGTTCTAGTGGCTTCGTTAGTTTTCGTTCTGCT
GGAGGAAAGTTGGGTTCGGATGCCACAGAAAACCGGGTGGCGTACATACC
CCCGATGGTTACAATGCTGCGCTCCAGCTTAGAACGAGAAGCGAGGCACA
TGCCAAAGCACACTCGCCACCAAAGGGAAGACAGCGTAAGCGAAAGGCTG
ACTCTGTTTGCGTGAAAACAACATGGATACCAGAAGCACCCAACAACTGG
ATGAACACGGTACAGATACTTGGAAATCGAGAATGTTATCACGAGACAAA
ATTTTTGATGCGAGCGCGGGTTGAGATGGTACACAAATGATTTTTAGGAA
CCTTTTTTTTCTATCTCGTCAAGTTGGCCAGCCGTTGGAAGCAAACAACG
CACTGGCTGGTGTCAGCCCTGGGGACAGCCTTGGACTCCACTTGGTTTTA
ATGAATGTTTGGTGTACTGCCATTTGCAGATATCAAACCTGTGCTGCTGT
TGTTGTTGTTGTTGTTGTTGTTTTTTCACATTGTGTACGCTGCTATCCCA
GCCGGTAAAAGAAGTGAGTCAGCCAGGGACGCACCACAGGTATCAATCAT
ACTTCACCGCCCTCGAAAAAGCTATGCCCTCGGAATGTGGAAAGAAATGA
TCCCGATCCGAAAAAGCTCGATCTCATCACCATTGCACTCCGAAGAACGT
CGTTGTAGATACACACATACCCTAAAAAACGTTTGCGCTCGACACGCGCG
CCGCTGTTGTTACGTTGGAACGCTTAAGACATCGCTGGTGTTTTCCGTGG
GAGAGGAAGAGGTGCCGAACTTCAGAATGGTGGAGAGACACTACTTCCGA
GACCAGGTGAGGCGGCGCACCGCCGTGACGCCGGGAACCGGAATCAGGTC
CAGCCAAATCGAGCGAAAAGTCGGTGGCCGATTCCCGTCGATTGTTCCGT
CTTTGAAAGTTAACCCAAAGTGGTCCACGACTCTTACGGAGAGATCCACC
CGATTTAACTTATGCTTGGGCTGAAGCATGCGACATGTTTGCTTACCCTT
GGAGTTGTGGAGCTGCGGTGGTGGCTACCGCTTTGGCTTCTATTTTAGGC
TTTGAGCCATATGTAGAGCTTGACAGGACTCAAACCCCGATGCCCTCCAC
CGCGCGCTGTTGCGCTCTTATCTGCACGAAGTTGGTCAAGAGCTACGATT
TTGGCTTCGGATTTTGCATCCCGGCGAGCACCAACACCTGGGACGCCGTC
TACCAGGTTCCTCCTCTCGACGATGATCTAAGTGAGACCAAATCACCCGC
ATAACTCCTGAAGATCTCACCGACACCTAGTACCTAGTACCTAGTACCAG
ACGATAGCACATGTTATAACACTTTCCATCACTGAAACCTACTCGTGAGG
GAAGGATAGATGATTTTTCGAAGTGGGACTTGATCGTGAAAGAGGTTTAC
ATCTCATAACAAAGTACCATGGTACAGCAGTAGGGGTACGCCAAAGCCGG
AGAAAGGGGTTAGAAGGAAACAGCTTCTTGTTGCGCTAAGAAAAGCAGAG
CTACAACCATCGGGGTGTTGCGAGCAACTTGTTATGTCACGCCCAGCGGC
TGGGCTTGAAGAGCAAAACTGGTCTGCCTGTGATGCCGAATATACCCCTC
TTGGTTCTCCTCATGTGTCTACACATGATCTATGTAGCTACGAAGGTCGA
CTCGCGCCCCGGTGAACAGACAGGAAGGCTCTCGCTAAGAAAATAAAAGG
TTTCACGCCAACGAAGCAACGCCATCGTCGCGACTAAGCCGCGAAACGTA
GATGCTACGGACGCCCACATCGCTCACACCAATGCCTGTTATCTTCCCCG
CCGAAATCCGCCAGGGATATTACATTCTGCTAGAGATAACGGTACTTTTA
AGTACGTCGCTGAAAACCAGTCGATGGTGCATCTAGATTCAAGGCTCTTT
CGATGTCTTCACTCCTTGCCTGCCCCCCTCCCTCCTCCGTCTTGTTCTAT
ATTTTGTCCACCTCGCGAAAAACCCACGCGTCTCGAACGAACGACAAAAA
GTCGAGGAGATGATCGCGCACCCCTTCGAGACCAAGTCGGACAGTTTTTA
CTTTGTTGACGACGAGCTGATCATGCACAACAAGGCTAGCTATAAGTACG
TGCCCGAGGACGCCGCCCAATCCAAGAAGAGCTACGAGGTACGACGGAAC
GTGCCGGTCGGAATACGAGAAACTGGGTGCTTGTTTCAGCAAATGTCTGT
ATACAAATGTCAGCGGTCTTACGTACGTCCAATCTGCGAAAACGTCTTCC
AGGAGGACTTCTGTTGTGGGCATACGAACCCCCCCTCGCCATCCCAAAAG
CCACTCGCACAAAATCCGCGATCCGTATATATCTACATCGGTAGTTCGTT
GGAGATTTTTTTGTTTTTGTGCTTCTGAGCGTCTGCAGGTTCCACCACTA
TTGCCGAGCGCCTAACTTGTCGGGTCTCCTTCCAGGAGGGAGGGGGGGGG
GATAAGCAGGGGCCACACAGAGCTGGGAGGCATGGGCATCTGTCCAGCGA
TATTCATGTCATCCCTCGAAACTTATAGTTCGTGAGTTCGACACTAGGTG
TATCGGGAAGCTTGATCGGTATACTCTCGTTTAGAATACTGCAGGTACCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCGACCCCCCTACA
CGCCGGGGCGGCCCGCCCACTGGGGGGGGCCCGCGACTAACNNNNNNNNN
NTGGGTCTTGTGTTAGCCACTCGGTGTATCGGGCGGCTTTGGCGGTTTCT
CTGCTTTTATGATGCGCCGGGTCCCCCCCCCCCCCCCCCCCCCGCGAACG
CTGCTACATATGCCGACACATTTAAGCGGCGGGGGGCGCTTGACAATTGG
GGTTTACCGCGCATCAACAGCGGCAGCACCAGAAACTATAGTTCGCAACC
ACAAAGGTGCTGAGAACACCAACACATTTTAGCCACAACCAACAACACGT
TTAGGTTTTTGTGTCTCAGGTAGCGTTGCTGACCCCGCCGCCCCGCGCAT
TATGACCACCGCCGCATCCGACCCAAACAGGATCGGTATGCGGGGGCTAA
GGGGGCAAAGAAACAGGCGTCAAAGTACGACTCCGGTGAGTGTGAGGGAT
CAGTTGTCCCGTGCTCGTGTGCAAAGAATCTCGCGATTAGGGGTGGGTCA
GGGGATGAACAGTTGTTGCAAGACTCAAGCGGCCAATCTTGTGCGTTTTG
GGACGACGAGAACGTTTACCGCGGCAGGAAGGATTTTCTCTTTGTATGCA
TGGATGATATGTATGATGTGTATGCATAGACAATGTGTATGTGTGTTTTT
TTTTTGTTTTTGTATTTTTATTCCCATTATTTGCATACCTGTCTGCCCCA
CTCCCCCTTCCTCCACTACGACTGACTAGACGACCCAACCGGGGTCACAC
AGGAGGGGGGGGGTGGACCCCCTCCTGTGGTGCCTGCGTGTATGCGTGTG
TGTACATGTACTTCGAAGTATGTATGTATGCGTGTGTAGTTGGACTTTGA
AGTACTACATTTTTCTATGTACGAAGAGGTATGTTATAATTATTTGTGTT
TTCCTCTTAGAAAGTCAGAGTACTTACCTCTGCTCGGACGAGGGTCCGCG
TTAATGTGGGTACAGTAGTATGTCAGGGGCGTGTTGCGTCATCCACCGGT
GTTCCGACCACGTTCCCGGTAAACTCACCTCGCCGCCTTGCGCACAAATA
TTGTGGGGGGAAACACGAATTTCGTAGACACGAATTTTGACGGGCTGATC
GATCCACTTAATAAACTTCATACCAATATCACGAAATCCAACTAAATAGA
CGTCGACGTTTTTCTTATCGTGATAGGACCGGAGAGCTTTCATGAGTAGC
TGCAACACGGAGAGTAGAGCAGAGGCGGTTTTGAGATATTTTTTCGGCGG
GGAATTCGCCTGCCTGCGGAAGCAATCGATCAGAAAAGTGGATAAAGCAC
AAGGGGGGGGGGGGGGGGGGGGGGGGAAAAAAATATAATTCTCCCCCCCC
TCCCCACCCTTTATTTTTTGTTTTTTTGTGACCGATATTTTTGTTTTCCG
TTTCGCTCCCNNNNNNNNNNCGTTCGTGCGCCGCCGACGGCTCGGCGACT
GCTGCGTCGGCTGAGACAGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGT
CGAGAACAAGTGTACGTCTCTCCCCCTGCCCACACTTCTATTTTTCGAGA
TTTGCAGGCAAAGTTCTGTGCTTTACGTTCGGCTCCCGCTCCTCTCTTTT
CTCATTCGTTTGCCGCGGTTTGGTGCTTTGTTTGCGTCCAAGACGAAGGG
GATGAAGGGGGTGACGACGACAGAAGCGAAGACGGAAGCACCGCCGGCGG
AGGCATCCGCGGCGAGCGAAAGGTGGGTGGGCCAGCACTTTTTGTTCCTC
ATCCTCGCATCTACAACTGTAATCTGCTCTTAGTTCCCCCCGGGGTGAGT
TCCCCGCCCCTATCACCTTTTCGGGCTGGAAGCATGGTTTCTCTGAGTTC
TCCCCGGGGGGGTTGCTTTTTTCACAAAAAACAAAAAAGATCCCCTCCCC
GGGGGGAACTAAGAGCGGATTACGGTACATGCATGTTGTGCGGAGTATTG
TATCGGAGGCGCCAGTTTATATACCCTTGCGCCTACAGAGACGTAAGACG
TGTACATAGATCTTACGGATTTGATGTACAGGTTTGAACACATGTTTGGC
GCCGGGGCAGTTGAATCAATCCCGCTGCTTTGAACGCATCTTGCACTCTT
TTCCCTCGTATTTAGCAGATCAACCCTCAATTTCGAAGACTAACTCTTGT
TTCCACACCTACAGAGGGCCGATCTGGAAAACCAACTAAATCCGTTTTTT
TGTATCGCCGCAGGCCGGGGGCAAGTACGACGATGAAGAAGGGGACAGCA
GGCGGGGATCCGTGGAGAGCACGGGTGGGGCTGGGAACGAGGATGACCCT
TGGTCGAAGGAGGCCGACTACTACTGATGGATTTAGATTGTCAGCGGGGC
CATGATAGCGGCATTGCTGACCGCATGCTTGACCGCTCCAGCTTCCTAGC
CTAAACCGACCCCGTAGGCGCATGAGGCGCAAGGACGTGCGGGAGGCGGG
AGCGAGGAAGGGGCGGGGTGCACCGGTCGGAATGGTCGGAATGGAAGGCT
GGTTTTAGGCGTGTGCCTGTGAAGCTGGATAGGTTGTCAGAGAGGTGCCC
GAAAGCTTCAGAGAGAATCGAGGAACGAAGGATTACGTGACCCTTTCACC
CAATATGTTGTTTTAAATCGAGTTTGTTGATTTCCCGCCTAAAGGCGTGT
ATTCACTGCGTACTTACGACGGCCAGGTGGATGCACAGGGTTTGGGCGAA
AGTGACGAGAAATAGGCATTTATGGTACCACTTAAGGAACATCGGGGTAG
TCGTCGGTAGTATCCTGAAATAGTTGATTGCCATGGGTAAAGAGGGTCTG
ATGGGTCGAGCGGGGCATTGAAACTACCCTATGGTGGTGGTGGGTTGGGT
TGTTAGAGTTTGCGGGTTCGTAATAAAGCGAATGGTCGATCCGCGAGCTC
GCGAACGAATGTGCAGTCAACGGCAAACATCGGGAGACCTTTAATCTAGG
ATTCGCGAGGGGATATTTGTGTTTTTATTTGTTGGGGGCTACGTTTCATA
GACTACTTTCATTTCCGTTTGGCTTGTGGGTTGGTAGGATAGTGTGACGG
AAGGAAATGAACCGGTCGATTCCGGTTGTTCCGGCGGCAGCGTATTTCTG
TCTCCGAGGCCAATGGTCGGGGGAAGGGGGAGCGATTCGCAGCCCAGTAC
CAGTAGAAAAAAGACTCTGACGCCCCTGGTGGAAGCTTACAGGCGAAGCG
TGTGGCGAAGCATGAGCGTTGTTTAGCCAGCCAGGAAACGGGGCGAAGAG
AAAGCTTTTACATGTATTCGAGTTGCACGCCAAAGCGC

Coding sequence (CDS) from alignment at L-elsbetiae_contig118:7507..15244+

>mRNA_L-elsbetiae_contig118.1548.1 ID=mRNA_L-elsbetiae_contig118.1548.1|Name=mRNA_L-elsbetiae_contig118.1548.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1614bp|location=Sequence derived from alignment at L-elsbetiae_contig118:7507..15244+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTGTGCGCTCTCGGCGAACAAGCACCAGATCGAGTTCCTCGAGTTTAC
CATCAGCGACTACGCTACCAAGAACATTATTTTCATGATGTGTGCGCTCT
CGGCGAACAAGCACCAGATCGAGTTCCTCGAGTTTACCATCAGCGACTAC
GCTACCAAGAACATTATTTTCATGGTAGGGCGGGACTACCCGCCGCCTGT
TGACCTCGACCTCGACTTGGGAAACCTGGACGAGAATGCCTACCGCCTCA
TCAAGTACGAGTTCTCCGAGGACGTTCTCCGGTTACCGTCTATTCAGGTA
GGGCGGGACTACCCGCCGCCTGTTGACCTCGACCTCGACTTGGGAAACCT
GGACGAGAATGCCTACCGCCTCATCAAGTACGAGTTCTCCGAGGACGTTC
TCCGGTTACCGTCTATTCAGACATCGCTGGTGTTTTCCGTGGGAGAGGAA
GAGGTGCCGAACTTCAGAATGGTGGAGAGACACTACTTCCGAGACCAGAC
ATCGCTGGTGTTTTCCGTGGGAGAGGAAGAGGTGCCGAACTTCAGAATGG
TGGAGAGACACTACTTCCGAGACCAGTTGGTCAAGAGCTACGATTTTGGC
TTCGGATTTTGCATCCCGGCGAGCACCAACACCTGGGACGCCGTCTACCA
GGTTCCTCCTCTCGACGATGATCTAATTGGTCAAGAGCTACGATTTTGGC
TTCGGATTTTGCATCCCGGCGAGCACCAACACCTGGGACGCCGTCTACCA
GGTTCCTCCTCTCGACGATGATCTAATCGAGGAGATGATCGCGCACCCCT
TCGAGACCAAGTCGGACAGTTTTTACTTTGTTGACGACGAGCTGATCATG
CACAACAAGGCTAGCTATAAGTACGTGCCCGAGGACGCCGCCCAATCCAA
GAAGAGCTACGAGTCGAGGAGATGATCGCGCACCCCTTCGAGACCAAGTC
GGACAGTTTTTACTTTGTTGACGACGAGCTGATCATGCACAACAAGGCTA
GCTATAAGTACGTGCCCGAGGACGCCGCCCAATCCAAGAAGAGCTACGAG
GATCGGTATGCGGGGGCTAAGGGGGCAAAGAAACAGGCGTCAAAGTACGA
CTCCGGTGAGTGTGAGGGATCAGTTGTCCCGTGCTCGTGATCGGTATGCG
GGGGCTAAGGGGGCAAAGAAACAGGCGTCAAAGTACGACTCCGGTGAGTG
TGAGGGATCAGTTGTCCCGTGCTCGTACGAAGGGGATGAAGGGGGTGACG
ACGACAGAAGCGAAGACGGAAGCACCGCCGGCGGAGGCATCCGCGGCGAG
CGAAAGACGAAGGGGATGAAGGGGGTGACGACGACAGAAGCGAAGACGGA
AGCACCGCCGGCGGAGGCATCCGCGGCGAGCGAAAGGCCGGGGGCAAGTA
CGACGATGAAGAAGGGGACAGCAGGCGGGGATCCGTGGAGAGCACGGGTG
GGGCTGGGAACGAGGATGACCCTTGGTCGAAGGAGGCCGACTACTACTGA
GCCGGGGGCAAGTACGACGATGAAGAAGGGGACAGCAGGCGGGGATCCGT
GGAGAGCACGGGTGGGGCTGGGAACGAGGATGACCCTTGGTCGAAGGAGG
CCGACTACTACTGA