mRNA_L-elsbetiae_contig11788.1540.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11788.1540.1
Unique NamemRNA_L-elsbetiae_contig11788.1540.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: D8LLN3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN3_ECTSI)

HSP 1 Score: 756 bits (1952), Expect = 2.190e-268
Identity = 424/558 (75.99%), Postives = 461/558 (82.62%), Query Frame = 1
Query:    1 CLHPRSRLLPLRRSFVP-GSREAHDERRFVRVAPEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPP--RVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVG-----GSDG--NQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHASAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAKCSTPF 1644
            CL  R R LPLRR     GS         +++ P V+ ALEE RP+VALESTIISHGMPYPENLAMARGVEDIIR+RG VPATVA+L+G+PHVGLTASQLESLAEAGPRARKCSRRDLAVA+AQG DGATTVA T++LASL GVKVFVTGGMGGVHRGAETTFDVS+DLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPV+S GTDDFPAFFSPSSGVPSPLRLD+PSEVA  AKAGFDLGM+NG++VAVPNP+PMSGGAGIDAAI  AL++A+ RGLKGRD+TPFVLA VN+TTGG SLKSNVALVRHNAKVGA+IAVQLAA+  RP        R  P + P  RVAVFGGAVADIVSKPP G  LTPGTSTPG TRQS GGVGRNVAEGVARVL  R+        +S S  D SGAVVTL SVVGAD+ GK LVAGCEEAGV AEATVEVG     G DG  ++AGTASYVAVL GDGDLVAAVADMR  E MT DFVERHAS +DGA+VV+ DGNLPP+G   V+ LC    VPLVFEPTSVAKCS PF
Sbjct:   19 CLRRRGRHLPLRRCLAAWGS--------TLQIEPGVQRALEEGRPIVALESTIISHGMPYPENLAMARGVEDIIRERGAVPATVAVLQGRPHVGLTASQLESLAEAGPRARKCSRRDLAVALAQGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAAAAKAGFDLGMRNGMVVAVPNPAPMSGGAGIDAAIHEALEQAEARGLKGRDITPFVLASVNETTGGHSLKSNVALVRHNAKVGADIAVQLAALTGRPTAPEAFLARPTPTAAPPLRVAVFGGAVADIVSKPPTGTALTPGTSTPGETRQSFGGVGRNVAEGVARVLLARRGDNVAMGIDSSS--DGSGAVVTLASVVGADEPGKGLVAGCEEAGVNAEATVEVGCSSGAGDDGGSDKAGTASYVAVLGGDGDLVAAVADMRVLERMTADFVERHASIIDGASVVIADGNLPPEGFARVSGLCAERNVPLVFEPTSVAKCSVPF 566          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A6H5KQU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU4_9PHAE)

HSP 1 Score: 676 bits (1745), Expect = 2.950e-235
Identity = 393/525 (74.86%), Postives = 426/525 (81.14%), Query Frame = 1
Query:  367 QGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAK-------AGFDLGMKNGLIVAVPNPSPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPP--RVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVG-----GSDG--NQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHASAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAKCSTPFLTRAMGGISLTTPNLDELAAMSSAADGGGETGGQGGTLREGNSLATAALADGKLVDARPLGAALKTVLAAMLDDETEAPMVLL 1893
            +G DGATTVA T++LASL GVKVFVTGGMGGVHRGAETTFDVS+DLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPV+S GTDDFPAFFSPSSGVPSPLRLD+PSEVA+ AK       AGFDLGM+NG++VAVPNP+PMSGGAGIDAAI  AL++A+ RGLKGRD+TPFVLA VN+TTGG SLKSNVALVRHNAKVGA+IAVQLAA+  RP        R  P + P  RVAVFGG+VADIVSKPP G  LTPGTST G TRQS GGVGRNVAEGVARVL  R+S       +S S  D SGAVVTL SVVGAD+AGK LVAGCEEAGV AEATVEVG     G DG  ++AGTASYVAVL GDGDLVAAVADMR  E MT DFVERHAS VDGA+VV+ DGNLPP+G   VA LC    VPLVFEPTSVAKCS PF   A+GGI+LTTPNLDELAAMSSAA G  + G  G  +REG+SLATAALADGKLVDARPLG ALK VL AML  E   PM LL
Sbjct:   11 KGVDGATTVAATSYLASLAGVKVFVTGGMGGVHRGAETTFDVSADLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVVSLGTDDFPAFFSPSSGVPSPLRLDTPSEVAVAAKVGVEGSRAGFDLGMRNGMVVAVPNPAPMSGGAGIDAAIHEALEQAEARGLKGRDITPFVLASVNETTGGHSLKSNVALVRHNAKVGADIAVQLAALTGRPTAPEAFLARPTPTAAPPLRVAVFGGSVADIVSKPPTGTALTPGTSTLGETRQSFGGVGRNVAEGVARVLLARRSEKVAVGIDSNS--DGSGAVVTLASVVGADEAGKGLVAGCEEAGVNAEATVEVGCSCGVGDDGGGDEAGTASYVAVLGGDGDLVAAVADMRVLERMTSDFVERHASIVDGASVVIADGNLPPEGFARVAGLCAERNVPLVFEPTSVAKCSVPFSAEAVGGIALTTPNLDELAAMSSAALGWRKAGSGGQAIREGHSLATAALADGKLVDARPLGPALKAVLEAMLG-EVATPMTLL 532          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A485L2D8_9STRA (Aste57867_14884 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L2D8_9STRA)

HSP 1 Score: 380 bits (975), Expect = 1.340e-119
Identity = 258/575 (44.87%), Postives = 337/575 (58.61%), Query Frame = 1
Query:    7 HPRSRLLPLRRSFVPGSREAHDERRFVRVAPEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPPRVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMT-PDFVE---RHASAVDGAAVVVTDGNLPPKGLREVARL-CERGGVPLVFEPTSVAKCSTPFLTRAMGGISLTTPNLDELAAMSSA 1716
            H   R  P  R F   SR        + ++PEV+ AL   +P+VALESTIISHGMP+P+N  MA  VE+I+R+ G  PAT+AIL G+  VGL+ SQL +LA  GP A KCS RD+A  +A+   GATTV+ T  +A   G++VFVTGG+GGVHR  E T D+S+DL EL++TP+ VVCAGVKSILDI +TLE LET+ VPV+ + T +FPAFF+ +SG  + L+LDS ++ A        L + NG IVAVPNP+P+     ID AI   L E   +G+ G  VTP++L  VN+ T G SL SN+ALV++NA VGA+IA  L     R   + P         PP+VAV GGAV D+VSKP +      GTS  G T+QS GGVGRNVAE + R L V                        +VS VGAD  G  LV   E+ G+       V G       TA+Y A+L   GDL  A+ADM  F++++  D VE   RHA A+      V DGNL P+ +  +  L  +R  V   FEPTSV K + P   + +  + + +PN DEL +MS A
Sbjct:   12 HALRRASPQFRGFTSPSRRPF----HLNISPEVKDALRVGKPLVALESTIISHGMPFPQNYEMATEVEEIVRKNGACPATIAILNGEICVGLSPSQLHTLATCGPDATKCSTRDIAAVVARKGTGATTVSSTMRIAHAAGIQVFVTGGIGGVHRFCEETMDISTDLMELSRTPVAVVCAGVKSILDIPRTLEYLETHAVPVVGFKTKEFPAFFTQTSGSAAHLQLDSAADCATLIHTSAQLQLPNGFIVAVPNPNPVDASV-IDTAIHDGLVECKAKGISGNAVTPYLLKRVNELTKGASLASNIALVKNNAVVGAQIACALHETQRRAVRASP---------PPQVAVVGGAVLDVVSKPTDN--FLRGTSNLGRTKQSWGGVGRNVAECLRR-LDVE---------------------TMMVSSVGADAGGAGLVRHLEDLGMDVSGLAVVDGE-----ATATYCAMLTPCGDLDVAIADMDIFDTISWTDDVEDKLRHAHAI------VFDGNLSPETMARLVHLPADRQFV--WFEPTSVEKATRPIQAKCLHRVHVVSPNRDELRSMSEA 535          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: UPI00106B3D01 (LOW QUALITY PROTEIN: pseudouridine-metabolizing bifunctional protein C1861.05-like n=1 Tax=Dendronephthya gigantea TaxID=151771 RepID=UPI00106B3D01)

HSP 1 Score: 377 bits (969), Expect = 4.090e-118
Identity = 235/564 (41.67%), Postives = 337/564 (59.75%), Query Frame = 1
Query:   37 RSFVPGSREAHDERRFVRVAPEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYG-TDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSPMSG-GAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVAN-----RPQPSRPAKGRHHPPSPPRVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHASAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAKCSTPFLTRAMGGISLTTPNLDELAAM 1707
            RSFV     +   R  V    EV  AL +++PVVALESTII+HGMP+P+N+  AR V ++IR+ GVVPATVA+L G+ H+GLT S+LE +A+ G  A K SRRD+   +++G  G TTV+GT   A++VG+ +FVTGG+GGVH GA+ TFDVS+DL EL QTP+ V+CAGVKSILDI  TLE LET+GV V ++G T DFPAFF+P+SG   P  + +P E A   +   ++G+K+G+++ VP P   +  G  I+AAI+ AL +A T+G+ G++V+PFVL  VN+ T G+SL++N+AL+++NA VG+ IA++L+ + +     +PQ          P +  +  V GG+  D  +K  N      G +  G  +Q+ GGVGRN+AE +ARV   +                       L+S VG DD G+ L+   E   V        G      + TA+Y  VL+  G++V  + DM A   +T   V      +  A +V+ DGN+  + +     LC+R  +P+V+EPT + K   PF T A   I+ TTPN DEL  M
Sbjct:   15 RSFVKYLSSSWKSRTVVH--KEVSEALLKNKPVVALESTIITHGMPFPQNIKTARSVIEVIRRNGVVPATVAVLNGEVHIGLTRSELEYVAKMGKSAIKTSRRDIPAVLSKGLVGGTTVSGTMVAAAMVGIPIFVTGGIGGVHYGADKTFDVSADLTELGQTPVTVICAGVKSILDIPLTLEYLETHGVTVATFGDTLDFPAFFTPNSGHKVPYNVKTPEEAASMIECNIEMGLKSGMVIGVPIPESHAVLGTQIEAAIQQALQDAKTKGVSGKEVSPFVLQRVNQLTKGKSLEANIALIQNNALVGSRIALELSKLRDVKTLGQPQTIPSISDELTPKTAKQPVVIGGSNVDFTAK-ANSEITFHGATNVGRIQQTFGGVGRNIAECIARVGHCKP---------------------LLISAVGGDDLGEMLLRQLELVRVST-----YGVHISKNSNTATYSVVLNNQGEVVVGIGDMEAHGEITAQLVSAFEETISSAPIVIIDGNIGEEVINYCIGLCKRHTIPVVYEPTCLMKAKKPFETDAWKDITFTTPNFDELKIM 549          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A0L0DJT1_THETB (PfkB domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJT1_THETB)

HSP 1 Score: 370 bits (949), Expect = 2.730e-116
Identity = 253/556 (45.50%), Postives = 323/556 (58.09%), Query Frame = 1
Query:   94 APEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNP-SPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPPRVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHASAVDGAA--VVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAKCST-----PFLTRAMGGISLTTPNLDELAAMSSAADGGGET 1737
            +P+V  AL    PVVALESTI++HGMPYPENL  AR VE  ++  G VPAT+AI+ G   VGLT S+LE LA  GP+  K SRRD+A  +A+ A GATTVA T+ +A+  G+ VFVTGG+GGVHRG E + DVS+DLAELA+TP+ VVCAG KSILDI +TLEVLET GVPVI YGTD+FPAFF+  SG  +PLR+DSP+E+A    A   LG+  G ++ VP P +  + GA I+AAI  AL +AD RG+ GR +TPF+L  V   TGG SL+SN+ALV +NAKVGA IA +LAA+  R + S  A G           V GGA  D+V        L   +S PG    + GGV  N+A  + R+                      GA   L++ +G D    A+    E  GV +E    V G       T SY+AVL   G L  AVADM   + +  D     A A +GA   V++ DGN  P+ LR +        +PL FEPTSVAK        P  T A   ++  TPN  EL A++ +    G T
Sbjct:    9 SPDVASALAAGLPVVALESTIVAHGMPYPENLVTAREVEATVKDAGAVPATIAIVDGVIKVGLTDSELERLAAMGPKVAKVSRRDVAAIVARAATGATTVAATSLIAARAGIAVFVTGGIGGVHRGGELSMDVSADLAELARTPVAVVCAGAKSILDIPRTLEVLETAGVPVIGYGTDEFPAFFTAHSGSAAPLRMDSPAEIARMVAASAALGLGGGAVIGVPIPDNAAADGAVIEAAISRALADADHRGITGRALTPFLLERVAHLTGGASLESNIALVLNNAKVGAAIACELAAL--RAKNSASAAG---------PLVVGGAGLDVVGT-AGETGLVADSSAPGTISYAPGGVALNIASVLGRL----------------------GARPALLTRIGDDVPAHAVSRQLETCGVASELVTSVPGGR-----TGSYLAVLKSTGSLAYAVADMALVDGLDFDAAAVEA-AYNGAPPPVIIADGNCSPRLLRAIGAYAAAHSLPLYFEPTSVAKAGRLGSAGPDFTAA---VTCLTPNEAELVALAQSTPDFGAT 521          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A7S3DFJ0_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DFJ0_9EUKA)

HSP 1 Score: 369 bits (948), Expect = 7.690e-116
Identity = 254/552 (46.01%), Postives = 332/552 (60.14%), Query Frame = 1
Query:  100 EVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSP-MSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPPRVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAF-ESMTPDFVERHASAVDGAA---VVVTDGNLPPKGLREVARL-CERGG-VPLVFEPTSVAKCSTPFLTRAMGGISL----TTPNLDELAAMSSAAD 1722
            EV  A ++  P+VALESTIISHGMPYP+N+  AR VE ++R +G  PAT+AIL+G+ H+GL A+ LE L +AG   +K SRRD+A  IA   +GATTV+GTAFLAS   + VFVTGG+GGVHRG E + DVS+DL EL+QT + VVCAGVKSILDI +TLEVLET GVPV +YGT++FPAFF+  SG  +P R DSP+ +A   +A   LG+  GL+V VP P    + G  ++ AI +AL EAD +G++G + TPF+L  VN+ + G SLKSN+AL+ +NAKVGA I+V L+  A +P  S P    H       V   GG   D +S+P +   L   TSTPG T++  GGV  NV     R L V                   G  V LVS VG DD G+ L+    E+G+  E  +E+         TASY A+ D  GDL AAVA M  F E  T   V +  +     A   VV+ DGN+  + L  V R+ CER   V +V EPTS+ K S  +L + M   SL      PNL+E  +M+S  +
Sbjct:   13 EVCEARQKGMPIVALESTIISHGMPYPQNVETARKVEAVVRSQGATPATIAILEGRVHIGLDANALELLGKAGSTCKKTSRRDIAYVIANKLNGATTVSGTAFLASKASIPVFVTGGIGGVHRGGELSMDVSADLTELSQTGVTVVCAGVKSILDIRRTLEVLETLGVPVFAYGTEEFPAFFTTKSGCRAPFRADSPAVIARAIQAQRSLGLPGGLLVGVPIPKDEQANGMLVEQAIESALREADEKGVQGAETTPFLLKRVNELSKGASLKSNIALILNNAKVGAAISVALSKSAFQPFRSLPGPLGHEA----AVLCVGGLAQDRISRPLSSQSLVLHTSTPGTTKEGVGGVAHNVG----RALSVL------------------GTQVELVSAVGNDDTGRLLIDSLRESGMTTEG-IELA----QTCNTASYNALHDETGDLHAAVASMSIFAEHPTEAHVSQRLNKCLSTANKVVVIVDGNVH-RLLSLVCRIRCERNDRVKVVVEPTSIVKGS--YLAKKMLDESLFVDVAKPNLEEACSMASTVN 530          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A1V9YNR7_9STRA (Indigoidine synthase A family protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNR7_9STRA)

HSP 1 Score: 370 bits (949), Expect = 8.010e-116
Identity = 248/556 (44.60%), Postives = 327/556 (58.81%), Query Frame = 1
Query:   52 GSREAHDERRFVRVAPEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPPRVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHASAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLV-FEPTSVAKCSTPFLTRAMGGISLTTPNLDELAAMSSA 1716
            G+R  H     ++++PEV+ A  + +P+VALESTIISHGMP+P+NL MA  VE I+R+ G  PAT+AIL G+  VGL  SQL +LA  G +A KCS RD+A  +A    GATTV+ T  +A   G+ VFVTGG+GGVHR  E T D+S+DL EL++TP+ VVCAGVKSILDI KTLE LETN VPV+ YGT++FPAFF+ +SG  + +RLDSP+ +A       +L + NG +VAVPNP+P      I  AI + L +A    + G  VTPF+L  +N+ T GQSL SN+ALV HNA +GA+IAV L  +        PA      P P  V V GG V DI+S+P +   L  GTS  G T+Q+ GGVGRN+AE + R+                           L+S VG D AG +L    E  G+    TV +    G    TA+Y A+L   G+L  AVADM   E+M  D ++  A        +V DGNL    + ++A       VPL+ FEPTSV K        A+  + + +PN DELAAM+ A
Sbjct:   15 GARALHQ----LKLSPEVQAAARDGKPIVALESTIISHGMPFPQNLEMATKVEAIVRENGACPATIAILDGEVCVGLAESQLHTLASLGAKATKCSTRDIAAVVASRGTGATTVSSTMRIAHAAGIDVFVTGGIGGVHRFCEETLDISTDLMELSRTPVAVVCAGVKSILDIPKTLEFLETNAVPVVGYGTNEFPAFFTTTSGSKAHVRLDSPAGIATLIATSKELKLPNGFVVAVPNPAPADASV-ITHAIESGLAQAKADNITGNAVTPFLLKRINELTKGQSLTSNIALVEHNAAIGAQIAVALKNL------QAPASASVSAP-PSDVVVVGGTVLDIISRPAD--QLVNGTSNIGHTKQTWGGVGRNIAECLHRL----------------------DVATLLISNVGEDAAGASLRQQLEAIGMT---TVGIASQPGQA--TATYCAMLSASGNLEVAVADMTVAEAM--DDLDVCAWTTPTTKALVFDGNLSAATMAKLAA----APVPLLWFEPTSVEKARRVVHAGALPRVHVISPNQDELAAMARA 523          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A6G0WGH9_9STRA (PfkB domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WGH9_9STRA)

HSP 1 Score: 369 bits (948), Expect = 1.290e-115
Identity = 238/552 (43.12%), Postives = 327/552 (59.24%), Query Frame = 1
Query:   52 GSREAHDERRFVRVAPEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPPRVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHASAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAKCSTPFLTRAMGGISLTTPNLDELAAM 1707
            GSR  H+    ++++PEV+ AL   +P+VALESTIISHGMP+P+N  MA  VE ++R+ G  PAT+AIL G+  VGL+  QL++LA AG RA KCS RD+   +A+   GATTV+ T  +A   G++VFVTGG+GGVHR  E T D+S+DL EL++TP+ V+CAGVKSILDI +TLE LET  VPV+ Y T DFPAFF+ SSG P+ L L+S  E A   +   DL + NG ++AVPNP+P+     ID AI   LDE  ++ + G  VTP++L  VN+ T G SL SN++LV++NA VGA+IA  LA   N P+ ++             V V GG V D++SKP +      GTS  G T+Q+ GGVGRNVAE + R+                           LVS VG D +G+ L+    + G+       +         TA+Y A+L+  GD+  A+ADMR F+SM  D  +  A  V  A V++ DGNL    + EV  +  +      FEPTS+ K   P   + +  +++ +PN DEL AM
Sbjct:   27 GSRRMHN----LKISPEVKNALRTGKPLVALESTIISHGMPFPQNYTMATEVEALVREHGACPATIAILDGEVCVGLSDEQLQTLASAGSRATKCSTRDIPAVVAKKGIGATTVSSTMRIAHAAGIQVFVTGGIGGVHRFCEETMDISTDLMELSRTPVAVICAGVKSILDIPRTLEYLETQAVPVVGYKTKDFPAFFTQSSGSPAHLELNSAEECAKLIQTSQDLDLPNGFLIAVPNPNPVDADV-IDKAISQGLDECKSKHISGNAVTPYLLKRVNELTQGVSLTSNISLVKNNAVVGAQIA--LALKGNAPKTTKA-----------DVVVVGGVVLDVISKPTS--QYVRGTSNIGQTQQTWGGVGRNVAECLHRL----------------------DIPTVLVSNVGQDSSGQGLIIQLNQLGMDTSGISVI-----ENKATATYCAMLNPSGDMDVAIADMRIFDSMQWDHDDLIAK-VQAARVLILDGNLSASKMSEVTAI--KPSQLTWFEPTSIEKAIRPIEGQCLHHLNVISPNQDELHAM 528          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A8J6CDF5_DIALT (PfkB domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDF5_DIALT)

HSP 1 Score: 369 bits (947), Expect = 2.650e-115
Identity = 250/550 (45.45%), Postives = 326/550 (59.27%), Query Frame = 1
Query:   91 VAPEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAG-PRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDD--FPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSPMSG-GAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANR--PQPSRPAKGRHHPPSPPRVAVFGGAVADIVSKPPN-GAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERH-ASAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAKCSTPFLTRAMGGISLTTPNLDELAAMSSA 1716
            V+  VR AL +   VVALESTIISHGMP+P+NL  AR VE  +R +G VPAT+A+L G+  +GL  SQLE LA  G  R RK SRRDLA  +A G  GATTV+ T  LA   G++VFVTGG+GGVHRG + + D+S+DL ELA+TP+ VVCAGVKSILDI +TLEVLET GV V + G  +  FPAFF+ +SG  SPL   S +  A    A   L +++G ++AVP P+  +  GA I+A+I+ AL EAD RG++G D TPF+L  V + T G SL+SNVAL+R+NA+VGA IAV+LA       P+ +         P+P    V GG  AD+ ++P   GA L   TS+PG    S+GGV RNV E +AR+                      G    LVS+VGAD  G  ++    +AG+   A           A TA+Y A+   DGDL+AA+ADM+    M   +V    A  +  A +VV D NL P GLR +A  C    VPL  EP SV K +    T A+   +  +PN DEL A++ A
Sbjct:   32 VSAHVRDALRDGAAVVALESTIISHGMPWPQNLETARAVEAEVRAQGAVPATIAVLDGRCIIGLDDSQLERLARLGRERVRKVSRRDLAAVVASGGHGATTVSATMLLAHAAGIRVFVTGGVGGVHRGGQDSLDISADLVELARTPVAVVCAGVKSILDIGRTLEVLETAGVTVATVGEAEAEFPAFFTAASGHASPLVWPSEAAAAAAVHAALALRLRSGQLIAVPVPAEHAAEGAQIEASIQRALGEADARGVRGPDATPFLLQRVAELTAGASLRSNVALIRNNARVGARIAVELARRLRTAAPELAPVVTAAAAAPAPVGPLVVGGTAADLTARPDAAGAGLLLRTSSPGALELSAGGVARNVCEALARL----------------------GCRPRLVSLVGADALGDLVLRASTDAGIDVTAVCAAP----RGARTATYTALHAADGDLLAAIADMQICAQMDGAWVRASVAPLLAHAPIVVADANLAPDGLRALADACAAERVPLFVEPVSVPKAAAAARTGALAACAFVSPNEDELIAIARA 555          
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Match: A0A7S2KSM0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KSM0_9STRA)

HSP 1 Score: 368 bits (944), Expect = 4.420e-115
Identity = 252/589 (42.78%), Postives = 342/589 (58.06%), Query Frame = 1
Query:   85 VRVAPEVRLALEEDRPVVALESTIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLESLAEAGP--RARKCSRRDLA-----VAIAQGAD-----GATTVAGTAFLASLVGVKVFVTGGMGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNGVPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLIVAVPNPSPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGGQSLKSNVALVRHNAKVGAEIAVQLAAVANR--------------------PQPSRPAKGRH--HPPSPPRVAVFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRVRQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAEATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHASAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAK----CSTPFLTRAMGGISLTTPNLDELAAMSSAADGGGET 1737
            V+V PEV  ALE  RPVVALESTI++HGMPYP+N+ +A+ V  I+R+RGV+PAT+A+  G    GL   +LE+LA+AG   RA KCS RDL      +   Q +D     GATTVA T  LA    +  FVTGG GGVHRG E + D+S+DL EL++TP++VV AGVKSILD+++TLEVLET GVPV ++ +D+FPAFFSP SGV +P R +    VA    +G +LGM +G++VAVPN  P   G  ++ AI+ AL EA+  G++GRDVTPF+L  VN+ TGG SL+SN+ALV++NAKVGA+IAV ++ V +                        S PA  ++  +     RV   GG+V DI++K  +   +  GTS PG   +S GGVGRNVAE + R+            D+ L  T            +G DD G+ +++   + GV       V  +DG    +ASYVA+LD + DLV  +ADM A + +    VE    A+ G   V+ D N P + + E A    + G  + FEPTSV K    C      +    +S   PN DEL AMS+ +  G  T
Sbjct:   15 VKVLPEVARALETGRPVVALESTIVAHGMPYPQNIELAKEVSSILRERGVIPATIAVKDGIFRAGLEQDELENLAKAGEENRAIKCSSRDLPLMASNITTQQSSDETVQWGATTVAATMRLAHAANINTFVTGGTGGVHRGGELSLDISTDLIELSRTPVIVVSAGVKSILDVKRTLEVLETFGVPVGAWQSDEFPAFFSPESGVKTPSRFNDAMSVARAYISGRELGMDSGMLVAVPNHDPA--GENVEKAIKEALHEAEAAGIEGRDVTPFILRTVNEKTGGDSLRSNMALVKNNAKVGADIAVAVSNVQSNCKTTIQSIQLPANDGDTSLSDSESTPASSKYSANDEVTSRVVCIGGSVIDIIAKSSSKEKMIIGTSNPGKVFKSDGGVGRNVAEVLGRL-----------GDKPLFYTS-----------IGKDDGGEGILSRLADCGVLTSGA-SVSFADGV---SASYVALLDDESDLVGGIADMDANQQIPTPSVE----ALSGVEFVLIDSNAPSRVMIESASNAAKAGASVFFEPTSVPKAKQICENDSFIK---NVSYAFPNEDELLAMSNTSVEGEST 568          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11788.1540.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLN3_ECTSI2.190e-26875.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KQU4_9PHAE2.950e-23574.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485L2D8_9STRA1.340e-11944.87Aste57867_14884 protein n=1 Tax=Aphanomyces stella... [more]
UPI00106B3D014.090e-11841.67LOW QUALITY PROTEIN: pseudouridine-metabolizing bi... [more]
A0A0L0DJT1_THETB2.730e-11645.50PfkB domain-containing protein n=1 Tax=Thecamonas ... [more]
A0A7S3DFJ0_9EUKA7.690e-11646.01Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A1V9YNR7_9STRA8.010e-11644.60Indigoidine synthase A family protein n=1 Tax=Achl... [more]
A0A6G0WGH9_9STRA1.290e-11543.12PfkB domain-containing protein n=1 Tax=Aphanomyces... [more]
A0A8J6CDF5_DIALT2.650e-11545.45PfkB domain-containing protein n=1 Tax=Diacronema ... [more]
A0A7S2KSM0_9STRA4.420e-11542.78Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11788contigL-elsbetiae_contig11788:981..6016 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score762.3
Seed ortholog evalue1.8e-217
Seed eggNOG ortholog2880.D8LLN3
KEGG rclassRC00002,RC00017,RC00432,RC00433
KEGG koko:K16329,ko:K16330
KEGG ReactionR01055,R03315
KEGG Pathwayko00240,map00240
Hectar predicted targeting categorymitochondrion
GOsGO:0001522,GO:0003674,GO:0003824,GO:0004730,GO:0006139,GO:0006213,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009116,GO:0009451,GO:0009987,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016835,GO:0016836,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050225,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:1901135,GO:1901360,GO:1901564,GO:1901657
EggNOG free text desc.Pseudouridine-metabolizing bifunctional protein
EggNOG OGsCOG2313@1,KOG3009@2759
EC2.7.1.83,4.2.1.70
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Ec32 ortholog descriptionPseudouridine-5'-phosphate glycosidase
Ec32 orthologEc-04_005090.1
Exons10
Model size1893
Cds size1893
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11788.1540.1prot_L-elsbetiae_contig11788.1540.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11788 981..6016 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815380.905052-CDS-L-elsbetiae_contig11788:980..11801622815380.905052-CDS-L-elsbetiae_contig11788:980..1180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 981..1180 +
1691682870.159577-CDS-L-elsbetiae_contig11788:980..11801691682870.159577-CDS-L-elsbetiae_contig11788:980..1180Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 981..1180 +
1622815380.961815-CDS-L-elsbetiae_contig11788:2234..24031622815380.961815-CDS-L-elsbetiae_contig11788:2234..2403Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 2235..2403 +
1691682870.1732943-CDS-L-elsbetiae_contig11788:2234..24031691682870.1732943-CDS-L-elsbetiae_contig11788:2234..2403Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 2235..2403 +
1622815380.9783735-CDS-L-elsbetiae_contig11788:2666..28791622815380.9783735-CDS-L-elsbetiae_contig11788:2666..2879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 2667..2879 +
1691682870.1829712-CDS-L-elsbetiae_contig11788:2666..28791691682870.1829712-CDS-L-elsbetiae_contig11788:2666..2879Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 2667..2879 +
1622815380.9959342-CDS-L-elsbetiae_contig11788:3189..33211622815380.9959342-CDS-L-elsbetiae_contig11788:3189..3321Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 3190..3321 +
1691682870.1913335-CDS-L-elsbetiae_contig11788:3189..33211691682870.1913335-CDS-L-elsbetiae_contig11788:3189..3321Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 3190..3321 +
1622815381.0138092-CDS-L-elsbetiae_contig11788:3695..39081622815381.0138092-CDS-L-elsbetiae_contig11788:3695..3908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 3696..3908 +
1691682870.200597-CDS-L-elsbetiae_contig11788:3695..39081691682870.200597-CDS-L-elsbetiae_contig11788:3695..3908Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 3696..3908 +
1622815381.0297365-CDS-L-elsbetiae_contig11788:4273..43521622815381.0297365-CDS-L-elsbetiae_contig11788:4273..4352Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 4274..4352 +
1691682870.21133-CDS-L-elsbetiae_contig11788:4273..43521691682870.21133-CDS-L-elsbetiae_contig11788:4273..4352Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 4274..4352 +
1622815381.042228-CDS-L-elsbetiae_contig11788:4397..48111622815381.042228-CDS-L-elsbetiae_contig11788:4397..4811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 4398..4811 +
1691682870.2219665-CDS-L-elsbetiae_contig11788:4397..48111691682870.2219665-CDS-L-elsbetiae_contig11788:4397..4811Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 4398..4811 +
1622815381.0526216-CDS-L-elsbetiae_contig11788:4938..49971622815381.0526216-CDS-L-elsbetiae_contig11788:4938..4997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 4939..4997 +
1691682870.2361982-CDS-L-elsbetiae_contig11788:4938..49971691682870.2361982-CDS-L-elsbetiae_contig11788:4938..4997Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 4939..4997 +
1622815381.0643992-CDS-L-elsbetiae_contig11788:5259..54331622815381.0643992-CDS-L-elsbetiae_contig11788:5259..5433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 5260..5433 +
1691682870.246496-CDS-L-elsbetiae_contig11788:5259..54331691682870.246496-CDS-L-elsbetiae_contig11788:5259..5433Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 5260..5433 +
1622815381.0806508-CDS-L-elsbetiae_contig11788:5776..60161622815381.0806508-CDS-L-elsbetiae_contig11788:5776..6016Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 5777..6016 +
1691682870.2534904-CDS-L-elsbetiae_contig11788:5776..60161691682870.2534904-CDS-L-elsbetiae_contig11788:5776..6016Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11788 5777..6016 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11788.1540.1

>prot_L-elsbetiae_contig11788.1540.1 ID=prot_L-elsbetiae_contig11788.1540.1|Name=mRNA_L-elsbetiae_contig11788.1540.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=631bp
CLHPRSRLLPLRRSFVPGSREAHDERRFVRVAPEVRLALEEDRPVVALES
TIISHGMPYPENLAMARGVEDIIRQRGVVPATVAILKGQPHVGLTASQLE
SLAEAGPRARKCSRRDLAVAIAQGADGATTVAGTAFLASLVGVKVFVTGG
MGGVHRGAETTFDVSSDLAELAQTPIVVVCAGVKSILDIEKTLEVLETNG
VPVISYGTDDFPAFFSPSSGVPSPLRLDSPSEVALTAKAGFDLGMKNGLI
VAVPNPSPMSGGAGIDAAIRAALDEADTRGLKGRDVTPFVLACVNKTTGG
QSLKSNVALVRHNAKVGAEIAVQLAAVANRPQPSRPAKGRHHPPSPPRVA
VFGGAVADIVSKPPNGAPLTPGTSTPGVTRQSSGGVGRNVAEGVARVLRV
RQSGTSTASDESLSCTDSSGAVVTLVSVVGADDAGKALVAGCEEAGVQAE
ATVEVGGSDGNQAGTASYVAVLDGDGDLVAAVADMRAFESMTPDFVERHA
SAVDGAAVVVTDGNLPPKGLREVARLCERGGVPLVFEPTSVAKCSTPFLT
RAMGGISLTTPNLDELAAMSSAADGGGETGGQGGTLREGNSLATAALADG
KLVDARPLGAALKTVLAAMLDDETEAPMVLL
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mRNA from alignment at L-elsbetiae_contig11788:981..6016+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11788.1540.1 ID=mRNA_L-elsbetiae_contig11788.1540.1|Name=mRNA_L-elsbetiae_contig11788.1540.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5036bp|location=Sequence derived from alignment at L-elsbetiae_contig11788:981..6016+ (Laminarionema elsbetiae ELsaHSoW15)
TGTCTGCATCCGCGATCGCGGCTACTTCCTTTGCGCAGGAGTTTCGTTCC CGGCTCGAGAGAAGCCCATGATGAACGTCGGTTCGTAAGGGTAGCGCCTG AAGTACGACTTGCCTTGGAGGAAGATCGCCCTGTGGTAGCGCTAGAGTCC ACCATCATCTCTCATGGCATGCCCTACCCGGAGAACCTGGCCATGGCCAG GTAGGTGGGATAGATGCTACATACTGCTGTTTGATTTGTTCGCTTCTTCA ACCGCACAGACAACACTCAGCATTACGAGGCATGTATCTTCGCCTCTTGA TGAAGACACTACAATCTTCGATCTTAATATATAGAAAAATAGCAGTCTTC TACTCCTTTTTGTTTTGTCCCGGTGTCGGTGGGTTCACTGCTGTGCGGTC GTCTTTTGAAATGTATGCGTTCTCATACTTTTATTGCACAGCAGTGCCGA GACGCCGATCCGTGCGAAGACGCCGATCCCTCTGCGAAAGTCGAATTAAA TGACTTGGCTCTACAAATTTAAGGCGCACCCCCGCTGCGATGACGCCGAT CCGTGCGATTCTGAACAAACCAAAGCGGCGGTATGGGGTGCTTCGAACAC ACACCCCCGTCAAGACCCCTTTACCGTATGTTCTTTAGGATTGCAAGCAG AGGTCGATGACGCCGATCCGTGCGATTCTGAACAAACCAAAGCGGCGGTA TGGGGTGCTTCAAACACACACACCCGTCAAGACCCCTTTACCGTATGTTC TTTAGGATTGCAAGCAGAGGTCTGGCGCGGAGCAGTTGGTTGCAGCTTGG CGCTAGAATGCTGTGTTGCAGGGGGTGGCCGGTTCTGGGCACCACTCGTA GGATCACCCAACCTCACCGAAGGTATCGGGGTTTCCGCACAGGGGTGCGG AGACCTCGATACTGTGCGGAGACGCCGGTACCTGTGCGATAGTTGAATTA AATAATTTGGAACCCGTTTTTTTCGCACCCCTGTGCTAAGACCCTGACCC GTGCGGAGACGCCGACCCGTGCCAAGACCCGTATCCTTACGGTACCTCGG CATGGTTGGATAGAGCCGAAAACGAAAAAGACGCCTTGAAAGCGCCCGTC TCACCTGACAGTAGTAGACGGCATCAGCACACAGACGTATGTAGTCCTTT ACTTAGCAGCAGTGCCTACGCGCAAAGCTTAGAACCACTGGTTTACATTC CACAACCACCTTGCCCACTACCTGATCCCTACACACGCTCGCGCGAAAAC ACAGAGGGGTCGAAGACATCATCCGGCAGCGAGGGGTAGTGCCCGCGACG GTGGCCATACTGAAGGGCCAACCCCACGTGGGCCTTACAGCGTCACAGCT GGAGTCGCTTGCGGAAGCCGGACCTCGAGCGAGGAAGTGCTCCCGGCGTG ACCTTGCCGTTGCCATTGCCCAGGTAGGCTTACGGTTGCTGCGAAAACGA GACGGGAAGGGAAAAACTAACACGGGGCGACGAGCACCAAACAACCCCAT ACAGCCCCTCCGGCGTCTAGCCTTGTTTGCGGTTGCTGCGAAAACGAGAC GGGAAGGGAAAAACTAACACGGGGCGACGAGCACCAAACAACCCCATACA GCCCCTCCGGCGTCTAGCCTTGTTTGCGCTCTCCGCTGAACCTCTTGCTG TCCGTTTACTTATTTATTTGCCTCATACGCGTGAAGGGGGCGGATGGCGC AACCACCGTAGCTGGTACTGCTTTCCTGGCTTCTCTGGTGGGGGTCAAAG TGTTTGTCACAGGAGGAATGGGGGGCGTCCATAGAGGGGCGGAGACAACT TTCGATGTCTCGTCCGACCTCGCCGAGCTGGCACAGACGCCGATTGTCGT CGTGTGCGCGGGAGTGAAGTCAATTCTGGACATCGAGAAGACTCTCGAGG TAAGTGCAGTGGATATTCTTCTGTGTCTTCTGTGTTTTCTTTTGCGTTTT CTCCCCTTGGGATCTCGTGGAGCTGACGGGCTGAGTATTCTTGAAAAGCA AGCGTGATGAGGATTAAACGTGTTTTTCGTCTGAGACTGGTGGTTATTGT CGTGGTTATTGTCCCACTTTTACTTGATGGGCGACGGTTTACCACCGCCT TCTCGATCTCATTCAACTCTCTCCGGCATGGCTTTGCTCCTCAAGCTCGG TGTGGTGATGTGACGATCGCGGCAACGTCCCTCTAAACCCCTCACTTCCG TAACACAAGGTCCTAGAGACGAACGGCGTGCCTGTGATTTCCTACGGCAC CGACGACTTCCCGGCGTTTTTCAGCCCATCTAGCGGCGTGCCGTCGCCGT TGAGGCTGGACAGCCCGTCCGAAGTGGCTCTTACGGCAAAGGTAAACGTG CGGGACGCACGAAAGACGTGGTGGTAGGTGAACGAAAGTACATATCAACT TGAAAGGAGTGAGGCTGCCCCGGATAGCTGTGTATTTTCTTAGGCTCGGC CGTACGAGGGCGTCAAGACGAGGGTACTGCGCGATCGTGATTGCTCCCCG TCTTTGTGCCACATACCACACATGTACGGCCACGGCAGTGAAACAGCTTA GGAATTTTATGCACACACATGGAAAGCGCTAACACGCTGCTCTCGTGCAA ACAGGTTGGGGTGCTGTTGTTGCGCCTCAGCGCATTTTTGGCGCGTCTCA CTTACGATCTGGGTTGATGTTTTCCACGGTGCCCCCCCTCCTCCCGTCCT CCTCCTCGTTTGAAGGCCGGGTTTGATCTCGGCATGAAAAACGGCCTCAT TGTCGCTGTACCCAACCCTTCTCCGATGTCTGGAGGGGCCGGAATAGATG CAGCGATTCGTGCGGCGCTCGACGAGGCCGACACAAGGGGCCTCAAGGGG CGTGACGTGACCCCTTTCGTACTTGCCTGCGTGAACAAGACTACGGGAGG GCAGTCGCTCAAGAGTAACGTCGCCTTGGTGAGAAGAGGGCGATCACAAC GAAATCAGGGCCGATATCGCAGCGGGGCCAGCATCGCACCCTGTACCGTG TGTGGTTCTGGCGTCTACGTTTTTCGGTTGGGGCAGTTCTAAGAGCATGG CAGACAATACGGCCAACAGGCGTCTGCGTGATCCAGCATCGCACCCTGTA CCATGTGTGGTTCTGGCGTCTACGTTTTTCGGTTGGGGCAGTTCTAAGAG CATGGCAGACAATACGGCCAGCAGGCGTCTGCGTGATACTCATACGCCAG GAAGTAGATACGCTCATCCTGGAGGTTTATGGTTGTTTTCTGTGAGAAAA TCTCCGCATCTGCATGACCTCGTCCCCGTGTGATGCGCGCAAGGTTCGGC ACAACGCGAAGGTTGGAGCTGAAATCGCGGTGCAGCTTGCCGCGGTAGCA AACCGTCCTCAGCCGAGCCGGCGTAGCCAGCCGGCATCCTGCTCCGGCGG CGCATCATCGATACCAGCGGCGAAAGGACGACACCATCCACCGTCGCCGC CCCGAGTGGCCGTCTTCGGCGGGGCTGTGGCAGACATTGTTTCAAAGCCT CCCAACGGAGCCCCCCTCACGCCGGGCACGTCCACCCCGGGTGTGACGCG GCAAAGCTCCGGTGGCGTCGGACGGAACGTGGCCGAAGGCGTCGCGAGGG TATTGCGTGTGCGTCAAAGTGGGACGAGTACAGCGAGCGACGAAAGCCTT AGTTGCACCGACAGCAGCGGCGCTGTCGTCACTCTCGTTTCCGTAGTGGG CGCGGATGACGCCGGCAAGGCGTTGGTTGCCGGCTGCGAAGAGGCCGGCG TTCAGGCAGAGGCGACGGTCGAGGTGGGAGGCAGCGACGGAAACCAAGCC GGAACCGCGAGCTACGTTGCAGTGCTTGATGGTGAGACTGTCCAGGTGGT GGTTTCGAGTGTCGTTGTTGTTGATGATGCTGAATTGTCTATTAATCCCT AACCGTTGATGACCTTAACCCTGCGCTTCCGTCGTCCGTTCTCGTTCTGC TTCGGAAGGCGACGGTGATTTGGTGGCGGCGGTAGCGGATATGAGAGCAT TCGAGAGTATGACCCCGGTAAGAGCTTCATGAACTAAGGTAGATATGTTT GGGCGTGCGGGTATCCGCTTCGTTGTTCGACACAAGGTTTCTAAAGTTTT TGGGGGTTCACTTTGGTGATACCGTTGGACGTAACTCCGCTAGCAGATCC GGGTCTGCAAAATAGGCGTGCAGTGCCAACGTGCGGATATCGATGGAGAC CGATCGAACATGTTGTGCCTTGTTCACTTGACACCTCCATGGAACTGACA TCATGCTGGTGCCGTTGTCACGTATGAAGGATTTCGTGGAGAGGCATGCC AGCGCTGTCGATGGAGCGGCGGTGGTCGTAACGGATGGCAACCTTCCACC CAAGGGCTTGCGCGAGGTAGCGAGGCTGTGCGAGCGAGGGGGCGTCCCTC TCGTGTTCGAGCCCACTTCAGTAGCAAAATGCTCCACCCCCTTCTTGACT AGAGTGAGTAAACACACACGCCTTCAAATATCATGTCATGCTGTTTTGTT TTTTTTTGTGTTGAAGGCCTGTTTTCTGATGGCTACGGGGTAATATTTGA TAGTATGATATATATTTGGTGGGTGAAACAGCGCGTCTGTTGCCGTCTTA CGACACAAATTGCCCATCCGACTAGCAAATCGCAGCCCACAAGTACATCT GATGCGCCCCGGCCAAGTCTGGCAGGATGAATGCGGCGCCTTCCAAACCA CGCCGTACCATGTTTGTGGCCAAGGTGACCAACACTACAGCTCGAGCGAC ACACCTCACCAGTGTGCCTACTTTGCGTACTCCTTACCGGCACCAGGCCA TGGGAGGAATATCATTAACTACCCCCAACCTGGACGAGCTCGCAGCGATG TCATCAGCCGCCGATGGCGGTGGAGAGACTGGAGGGCAAGGGGGAACGCT TAGGGAAGGTAATTCTCTGGCGACGGCTGCTTTAGCGGATGGAAAGCTAG TGGATGCACGGCCTCTTGGAGCAGCGCTGAAGACCGTACTGGCGGCTATG CTAGACGACGAGACAGAGGCGCCGATGGTTCTCCTA
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11788:981..6016+

>mRNA_L-elsbetiae_contig11788.1540.1 ID=mRNA_L-elsbetiae_contig11788.1540.1|Name=mRNA_L-elsbetiae_contig11788.1540.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=3786bp|location=Sequence derived from alignment at L-elsbetiae_contig11788:981..6016+ (Laminarionema elsbetiae ELsaHSoW15)
TGTCTGCATCCGCGATCGCGGCTACTTCCTTTGCGCAGGAGTTTCGTTCC
CGGCTCGAGAGAAGCCCATGATGAACGTCGGTTCGTAAGGGTAGCGCCTG
AAGTACGACTTGCCTTGGAGGAAGATCGCCCTGTGGTAGCGCTAGAGTCC
ACCATCATCTCTCATGGCATGCCCTACCCGGAGAACCTGGCCATGGCCAG
TGTCTGCATCCGCGATCGCGGCTACTTCCTTTGCGCAGGAGTTTCGTTCC
CGGCTCGAGAGAAGCCCATGATGAACGTCGGTTCGTAAGGGTAGCGCCTG
AAGTACGACTTGCCTTGGAGGAAGATCGCCCTGTGGTAGCGCTAGAGTCC
ACCATCATCTCTCATGGCATGCCCTACCCGGAGAACCTGGCCATGGCCAG
AGGGGTCGAAGACATCATCCGGCAGCGAGGGGTAGTGCCCGCGACGGTGG
CCATACTGAAGGGCCAACCCCACGTGGGCCTTACAGCGTCACAGCTGGAG
TCGCTTGCGGAAGCCGGACCTCGAGCGAGGAAGTGCTCCCGGCGTGACCT
TGCCGTTGCCATTGCCCAGAGGGGTCGAAGACATCATCCGGCAGCGAGGG
GTAGTGCCCGCGACGGTGGCCATACTGAAGGGCCAACCCCACGTGGGCCT
TACAGCGTCACAGCTGGAGTCGCTTGCGGAAGCCGGACCTCGAGCGAGGA
AGTGCTCCCGGCGTGACCTTGCCGTTGCCATTGCCCAGGGGGCGGATGGC
GCAACCACCGTAGCTGGTACTGCTTTCCTGGCTTCTCTGGTGGGGGTCAA
AGTGTTTGTCACAGGAGGAATGGGGGGCGTCCATAGAGGGGCGGAGACAA
CTTTCGATGTCTCGTCCGACCTCGCCGAGCTGGCACAGACGCCGATTGTC
GTCGTGTGCGCGGGAGTGAAGTCAATTCTGGACATCGAGAAGACTCTCGA
GGGGGCGGATGGCGCAACCACCGTAGCTGGTACTGCTTTCCTGGCTTCTC
TGGTGGGGGTCAAAGTGTTTGTCACAGGAGGAATGGGGGGCGTCCATAGA
GGGGCGGAGACAACTTTCGATGTCTCGTCCGACCTCGCCGAGCTGGCACA
GACGCCGATTGTCGTCGTGTGCGCGGGAGTGAAGTCAATTCTGGACATCG
AGAAGACTCTCGAGGTCCTAGAGACGAACGGCGTGCCTGTGATTTCCTAC
GGCACCGACGACTTCCCGGCGTTTTTCAGCCCATCTAGCGGCGTGCCGTC
GCCGTTGAGGCTGGACAGCCCGTCCGAAGTGGCTCTTACGGCAAAGGTCC
TAGAGACGAACGGCGTGCCTGTGATTTCCTACGGCACCGACGACTTCCCG
GCGTTTTTCAGCCCATCTAGCGGCGTGCCGTCGCCGTTGAGGCTGGACAG
CCCGTCCGAAGTGGCTCTTACGGCAAAGGCCGGGTTTGATCTCGGCATGA
AAAACGGCCTCATTGTCGCTGTACCCAACCCTTCTCCGATGTCTGGAGGG
GCCGGAATAGATGCAGCGATTCGTGCGGCGCTCGACGAGGCCGACACAAG
GGGCCTCAAGGGGCGTGACGTGACCCCTTTCGTACTTGCCTGCGTGAACA
AGACTACGGGAGGGCAGTCGCTCAAGAGTAACGTCGCCTTGGCCGGGTTT
GATCTCGGCATGAAAAACGGCCTCATTGTCGCTGTACCCAACCCTTCTCC
GATGTCTGGAGGGGCCGGAATAGATGCAGCGATTCGTGCGGCGCTCGACG
AGGCCGACACAAGGGGCCTCAAGGGGCGTGACGTGACCCCTTTCGTACTT
GCCTGCGTGAACAAGACTACGGGAGGGCAGTCGCTCAAGAGTAACGTCGC
CTTGGTTCGGCACAACGCGAAGGTTGGAGCTGAAATCGCGGTGCAGCTTG
CCGCGGTAGCAAACCGTCCTCAGCCGAGCCGGCGTTCGGCACAACGCGAA
GGTTGGAGCTGAAATCGCGGTGCAGCTTGCCGCGGTAGCAAACCGTCCTC
AGCCGAGCCGGCCGGCGAAAGGACGACACCATCCACCGTCGCCGCCCCGA
GTGGCCGTCTTCGGCGGGGCTGTGGCAGACATTGTTTCAAAGCCTCCCAA
CGGAGCCCCCCTCACGCCGGGCACGTCCACCCCGGGTGTGACGCGGCAAA
GCTCCGGTGGCGTCGGACGGAACGTGGCCGAAGGCGTCGCGAGGGTATTG
CGTGTGCGTCAAAGTGGGACGAGTACAGCGAGCGACGAAAGCCTTAGTTG
CACCGACAGCAGCGGCGCTGTCGTCACTCTCGTTTCCGTAGTGGGCGCGG
ATGACGCCGGCAAGGCGTTGGTTGCCGGCTGCGAAGAGGCCGGCGTTCAG
GCAGAGGCGACGGTCGAGGTGGGAGGCAGCGACGGAAACCAAGCCGGAAC
CGCGAGCTACGTTGCAGTGCTTGATGCGGCGAAAGGACGACACCATCCAC
CGTCGCCGCCCCGAGTGGCCGTCTTCGGCGGGGCTGTGGCAGACATTGTT
TCAAAGCCTCCCAACGGAGCCCCCCTCACGCCGGGCACGTCCACCCCGGG
TGTGACGCGGCAAAGCTCCGGTGGCGTCGGACGGAACGTGGCCGAAGGCG
TCGCGAGGGTATTGCGTGTGCGTCAAAGTGGGACGAGTACAGCGAGCGAC
GAAAGCCTTAGTTGCACCGACAGCAGCGGCGCTGTCGTCACTCTCGTTTC
CGTAGTGGGCGCGGATGACGCCGGCAAGGCGTTGGTTGCCGGCTGCGAAG
AGGCCGGCGTTCAGGCAGAGGCGACGGTCGAGGTGGGAGGCAGCGACGGA
AACCAAGCCGGAACCGCGAGCTACGTTGCAGTGCTTGATGGCGACGGTGA
TTTGGTGGCGGCGGTAGCGGATATGAGAGCATTCGAGAGTATGACCCCGG
CGACGGTGATTTGGTGGCGGCGGTAGCGGATATGAGAGCATTCGAGAGTA
TGACCCCGGATTTCGTGGAGAGGCATGCCAGCGCTGTCGATGGAGCGGCG
GTGGTCGTAACGGATGGCAACCTTCCACCCAAGGGCTTGCGCGAGGTAGC
GAGGCTGTGCGAGCGAGGGGGCGTCCCTCTCGTGTTCGAGCCCACTTCAG
TAGCAAAATGCTCCACCCCCTTCTTGACTAGAGATTTCGTGGAGAGGCAT
GCCAGCGCTGTCGATGGAGCGGCGGTGGTCGTAACGGATGGCAACCTTCC
ACCCAAGGGCTTGCGCGAGGTAGCGAGGCTGTGCGAGCGAGGGGGCGTCC
CTCTCGTGTTCGAGCCCACTTCAGTAGCAAAATGCTCCACCCCCTTCTTG
ACTAGAGCCATGGGAGGAATATCATTAACTACCCCCAACCTGGACGAGCT
CGCAGCGATGTCATCAGCCGCCGATGGCGGTGGAGAGACTGGAGGGCAAG
GGGGAACGCTTAGGGAAGGTAATTCTCTGGCGACGGCTGCTTTAGCGGAT
GGAAAGCTAGTGGATGCACGGCCTCTTGGAGCAGCGCTGAAGACCGTACT
GGCGGCTATGCTAGACGACGAGACAGAGGCGCCGATGGTTCTCCTAGCCA
TGGGAGGAATATCATTAACTACCCCCAACCTGGACGAGCTCGCAGCGATG
TCATCAGCCGCCGATGGCGGTGGAGAGACTGGAGGGCAAGGGGGAACGCT
TAGGGAAGGTAATTCTCTGGCGACGGCTGCTTTAGCGGATGGAAAGCTAG
TGGATGCACGGCCTCTTGGAGCAGCGCTGAAGACCGTACTGGCGGCTATG
CTAGACGACGAGACAGAGGCGCCGATGGTTCTCCTA
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