mRNA_L-elsbetiae_contig1178.1534.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15
Overview
Homology
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A6H5KRV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRV7_9PHAE) HSP 1 Score: 634 bits (1634), Expect = 1.420e-217 Identity = 389/562 (69.22%), Postives = 423/562 (75.27%), Query Frame = 3 Query: 489 LTREDLAPAVRGRMDEVLKEGEDDEMRQDARLVNFLGEVEEAQALAALDEYHAAVSETSVTIRNKPAYFMGILRKYKQGQRALLHPGQGNGSAGGGATSASGVRINAAAGSDGLSPSIASRLEKLYESGFIQKSDVDQRCLIFFRGLTEAEAAAAMDEFGQSDITSIRNKSAFLMSILRRHHQASNPASTPGVGAEAIAAA--AGRPPAATAXXXXXXXXXXXMGMGXXXXXXXXXXXXXXXXXXXXMYGGYPFAAGGHMSPFGLGFMDPSAMSMAXXXXXXXXXXXXXXXXPSPFADLYQWGGSYGQQHHPHHHSPPGMFNANAYGPPMATFIPPHMPMCQPGCSEMVPASIQLRLDQMTATGFCRAGEIDDRCRKFLREVPEHIALQAIDEFMSTERKNIRKVSAYFMGLIRKHADNYRELVSLGASGGPPPGVPSPYEAGMKRIREYQDMCAQNQVQQQQQQQLRPQGTSALMERIAGAPAKVRAGIADLIEKGIAVEWDIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRYKSGAPPPPGLTHR 2168 +T EDLAPAVR R+D+VL+EGEDDEMRQDARLVNFLGEV+EAQALAAL+EYHAAVSETSV IRNKPAY MGILRKYKQGQRA L GNG+AGG T+ + + AG DGLSPSIASRLEKLYESGFIQK+DVDQRC++FFR LTE EA AAMDEFGQSDITSIRNKSAFLMSILR GRP A XXXXXXXXXX M XXXXXXXXXXXMYG +PFA +MSP+G +MDPS PFA+ Y GG YG P M NAYG PMATFIPPH+PM Q G +EM+PASIQLRLDQ+ ATGFC AGEIDDRCRKFLREVPEHIALQAI+EFMSTERKNIRKVSAY MG+IRKHADNYR+ V++G SGGPP G+PSPYEAG+KR REY D A +QQQ RPQG SALMERIAGAPAKV+AGI DLIEKGIA+EWDIDVRV+NAFLGL EEQ VEAIEEFASCDM+RIRNKSAYLMGLLKRYKSGAPPPPGL R Sbjct: 137 VTIEDLAPAVRTRLDDVLQEGEDDEMRQDARLVNFLGEVDEAQALAALNEYHAAVSETSVNIRNKPAYLMGILRKYKQGQRAPL----GNGTAGGMVTTPNAMG-RMGAGPDGLSPSIASRLEKLYESGFIQKADVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRXXXXXXXXXXXXXXXXXXXXXXXPGGRPAAXXXXXXXXXXXXXGM------------XXXXXXXXXXXMYGAHPFAGVPYMSPYG--YMDPSMTGSV------------------PFAEFY--GGMYGHA--------PSMPLFNAYGQPMATFIPPHIPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQAIEEFMSTERKNIRKVSAYLMGVIRKHADNYRDFVAVGTSGGPPAGLPSPYEAGLKRYREYNDFWA-------KQQQPRPQGCSALMERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 644
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: D8LG90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG90_ECTSI) HSP 1 Score: 572 bits (1473), Expect = 5.910e-197 Identity = 334/535 (62.43%), Postives = 360/535 (67.29%), Query Frame = 3 Query: 564 MRQDARLVNFLGEVEEAQALAALDEYHAAVSETSVTIRNKPAYFMGILRKYKQGQRALLHPGQGNGSAGGGATSASGVRINAAAGSDGLSPSIASRLEKLYESGFIQKSDVDQRCLIFFRGLTEAEAAAAMDEFGQSDITSIRNKSAFLMSILRRHHQASNPASTPGVGAEAIAAAAGRPPAATAXXXXXXXXXXXMGMGXXXXXXXXXXXXXXXXXXXXMYGGYPFAAGGHMSPFGLGFMDPSAMSMAXXXXXXXXXXXXXXXXPSPFADLYQWGGSYGQQHHPHHHSPPGMFNANAYGPPMATFIPPHMPMCQPGCSEMVPASIQLRLDQMTATGFCRAGEIDDRCRKFLREVPEHIALQAIDEFMSTERKNIRKVSAYFMGLIRKHADNYRELVSLGASGGPPPGVPSPYEAGMKRIREYQDMCAQNQVQQQQQQQLRPQGTSALMERIAGAPAKVRAGIADLIEKGIAVEWDIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRYKSGAPPPPGLTHR 2168 MRQD RLVNFLGEV+EAQALAAL+EYHAAVSETSV IRNKPAY MGILRKYKQGQRA L GNG+AGG T+ + + AG+DGLSPSIASRLEKLYESGFIQK+DVDQRC++FFR LTE EA AAMDEFGQSDITSIRNKSAFLMSILRRHHQ D Y GG YG H+PP M NAYG PMATFIPPHMPM Q G +EM+PASIQLRLDQ+ ATGFC AGEIDDRCRKFLREVPEHIALQAI+EFMSTERKNIRKVSAY MG+IRKHADNYR V++G SGGPP G+PSPYEAG+KRIREY D A +QQQ RPQG SAL+ERIAGAPAKV+AGI DLIEKGIA+EWDIDVRV+NAFLGL EEQ VEAIEEFASCDM+RIRNKSAYLMGLLKRYKSGAPPPPGL R Sbjct: 1 MRQDTRLVNFLGEVDEAQALAALNEYHAAVSETSVNIRNKPAYLMGILRKYKQGQRAPL----GNGTAGGMVTTPNAMG-RMGAGTDGLSPSIASRLEKLYESGFIQKADVDQRCMVFFRDLTEKEAEAAMDEFGQSDITSIRNKSAFLMSILRRHHQ----------------------------------------------------------------------------------------------------------------DFY--GGMYG-------HAPP-MPLFNAYGQPMATFIPPHMPMYQAGTTEMLPASIQLRLDQLAATGFCHAGEIDDRCRKFLREVPEHIALQAIEEFMSTERKNIRKVSAYLMGVIRKHADNYRGFVAVGTSGGPPAGLPSPYEAGLKRIREYNDFWA-------KQQQPRPQGGSALLERIAGAPAKVQAGITDLIEKGIAMEWDIDVRVTNAFLGLTEEQGVEAIEEFASCDMTRIRNKSAYLMGLLKRYKSGAPPPPGLAQR 401
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A7S1EQC1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EQC1_9RHOD) HSP 1 Score: 89.0 bits (219), Expect = 1.310e-14 Identity = 111/452 (24.56%), Postives = 170/452 (37.61%), Query Frame = 3 Query: 828 LSPSIASRLEKLYESGFIQKSDVDQRCLIFFRGLTEAEAAAAMDEFGQSDITSIRNKSAFLMSILRRHHQASNPASTPGVGAEAIAAAAGRPPAATAXXXXXXXXXXXMGMGXXXXXXXXXXXXXXXXXXXXMYGGYPFAAGGHMSPFGLGFMD----PSAMSMAXXXXXXXXXXXXXXXXPSPFADLYQWGGSYGQQHHPHHHSPPGMFNANAYGPPMATFIPPHMPMCQPGCSEMVPASIQLRLDQMTATGFCRAGEIDDRCRKFLREVPEHIALQAIDEFMSTERKNIRKVSAYFMGLIRKHADNYRELVSLGASGGPPPGVPSP----------YEAGMKRIREYQDMCAQNQVQQQQQQQLRPQGTSALMERIAGAPAKVRAGIADLIEKGIAVEW----DIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRY 2129 LSP + + L L+ G +D+D R + F GL + A A+D+ D ++IRN+ AF+MSI +R +NP VG A PF G + P+ GF P M P + G +H+P P A A +PP +P ++ L Q+ A+G C E DDR + L + E A++A++EF S E +RK SA++MGL RK Y+ L + G SG P + SP YE+ +R + Q+ Q+ S + P A AD +++ + W D+D R +A + E + + ++E D SR+RN SAY+MGL ++Y Sbjct: 202 LSPEVQNALRALFTEGVCDPADIDTRSVEFLSGLPDKIALTAIDDIHHRDFSTIRNRPAFIMSIFKR---VANP-QRDAVGGPA-----------------------------------------------------PFV--GSVQPYSSGFSRSIPRPPPRGMRQLP---------------PEPTYVRPSGPRASEHNPDVFRQPA---APXXXXXXAATVPPE-------ALAHLPTAVGEGLQQVFASGVCHPSEFDDRAMEILVALKEPEAVRALEEFASVEPGRVRKPSAFWMGLARK----YKGLGASGVSG--PQNLNSPSSRGYGNQYGYESYDRRSAADEHAYVSGHRQRHYSSQIDSLSASRGPVALNRPPEFRHALAADRLQRIFSETWLSPNDLDDRAIDAIKRMSESEEMNVVDEILRTDPSRVRNISAYIMGLYRKY 563
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A1X6PIJ9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PIJ9_PORUM) HSP 1 Score: 85.5 bits (210), Expect = 1.830e-13 Identity = 73/258 (28.29%), Postives = 110/258 (42.64%), Query Frame = 3 Query: 1509 PGCSEMVPASIQLRLDQMTATGFCRAGEIDDRCRKFLREVPEHIALQAIDEFMSTERKNIRKVSAYFMGLIRKHADNYRELVSLGASGGPPPGVPS----------PYEA--GMKRIREYQDMCAQNQVQQQQQQQL-----------------------------RPQGTSALMERIA------GAPAKVRAGIADLIEKGIAVEWDIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRYKSGA 2141 P +P + L ++ ATG C + DDR L E+P H A++A+ EF + +R SA++MGL RKH SLG G P G+P+ PY A G + +Q + + Q QQ R SA M +A G ++V A + L+ + D+D R A L E+ A+ A++E A+ + SR+RN SAY+MGL ++Y S + Sbjct: 366 PSALAHLPGPVGEGLQRVFATGVCHPSQFDDRAMDILVELPTHAAVRALSEFAAVPPSRVRNPSAFWMGLARKHKSAIA-AASLGGQGTPQGGMPNMGYGPPPMAQPYGAPQGYGQPMHHQPPPSYDYHQVHQQPAYGGYEYGGQYGHGGYGPPPMVSGXXXXYDSRXXPVSAGMGGVAPAYGAQGGGSRVAARVDALVAARVVRPGDVDARAIEALGRLREQDALAALDELAAAEPSRVRNPSAYVMGLARKYASAS 622
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A7S3XFS6_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XFS6_9CHLO) HSP 1 Score: 85.1 bits (209), Expect = 2.420e-13 Identity = 59/189 (31.22%), Postives = 97/189 (51.32%), Query Frame = 3 Query: 504 LAPAVRGRMDEVLKEGEDDEMRQDARLVNFLGEVEEAQALAALDEYHAAVSETSVTIRNKPAYFMGILRKYKQGQRALLHPGQGNGSAGGGATSASGVRINAAAGSDGLSPSIASRLEKLYESGFIQKSDVDQRCLIFFRGLTEAEAAAAMDEFGQSDITSIRNKSAFLMSILRRHHQASNPASTPGVG 1070 L AV+ +++E+ G D + + L ++EE AL+ L ++ A T V RNK AY G + + ++ +P + + +G+ ++ L++LYE+G ++ D+D+RC F RGL E+ A AA+ E G S + +IRNKSAF+MS+ RRH + +P S G G Sbjct: 225 LGAAVQAKLNEIYSSGACAPEDIDVKCLQDLQQIEEDVALSVLSQF-AGYDLTQV--RNKSAYLSGAITRVRR--EMTTNPEK--------------YDKDIPRAENGMIQTVYDELQRLYETGHLRYGDIDERCTDFLRGLPESIALAALQEVGSSSLDNIRNKSAFVMSVCRRHSRGPDPHSQGGYG 394
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A7S1DEU8_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DEU8_HEMAN) HSP 1 Score: 76.3 bits (186), Expect = 2.350e-11 Identity = 60/205 (29.27%), Postives = 103/205 (50.24%), Query Frame = 3 Query: 453 GGAESKV--GLAGGLTREDLAPAVRGRMDEVLKEGEDDEMRQDARLVNFLGEVEEAQALAALDEYHAAVSETSVTIRNKPAYFMGILRKYKQGQRALLHPG--------QGNGSAGGGATSASGVRINAAAGSDGLSPSIASRLEKLYESGFIQKSDVDQRCLIFFRGLTEAEAAAAMDEFGQSDITSIRNKSAFLMSILRRHHQ 1037 GG E + G+ G L P V +M+ ++ G+ D ++ + L + +E + + LD + A ++T IRNK A+ I+R+Y+ R + G +G GSA A+ IN L S+ +RLE +YESG +Q+ D+D RC+ + L E A A+ + ++++++I +KS F + ILRR + Sbjct: 35 GGGEQQQPQGVVQGQDGNQLKPKVLEKMEALIAAGKCTREDLDHKIRDSLADFDEDKGVEILDNFGDANTDT---IRNKAAFIAAIIRRYRSEARGVPPVGGIGMMPHSEGAGSA------AAPAAINGE-----LVQSVNARLESIYESGKLQRGDLDDRCMEQLKALPEHLALEALQKLNEANLSTINSKSGFFVGILRRFRE 225
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A7S0LZI5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZI5_9CRYP) HSP 1 Score: 74.7 bits (182), Expect = 1.610e-10 Identity = 50/204 (24.51%), Postives = 89/204 (43.63%), Query Frame = 3 Query: 1524 MVPASIQLRLDQMTATGFCRAGEIDDRCRKFLREVPEHIALQAIDEFMSTERKNIRKVSAYFMGLIRKHADNYRELVSLGASGGPPPGVPSPYEAGMKRIREYQDMCAQNQVQQQQQQQLRPQGTSALMERIAGAPAKVRAGIADLIEKGIAVEWDIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRYKS 2135 M+P +Q RL+ + A+G R E+D RC + LR +PEH+ L+ + +F + +I + +FMG+I KR RE Q+ + +G P V+ + L + ++D + LPE AVE +++F ++S IRNK+A+ +G++KR+++ Sbjct: 195 MIPG-VQARLEAIFASGKVRREELDQRCLEQLRSLPEHVGLEVVGKFAEADLSSINSKAGFFMGII-------------------------------KRFRE----------------QVAASDPNVTASAFSGLPFVVQTKLEALFSTRLVGRNELDAKCYMELRQLPEPIAVEVMDKFCETNLSDIRNKTAFFLGIVKRFRT 350
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: R7QVV3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QVV3_CHOCR) HSP 1 Score: 71.2 bits (173), Expect = 4.380e-9 Identity = 59/207 (28.50%), Postives = 95/207 (45.89%), Query Frame = 3 Query: 1527 VPASIQLRLDQMTATGFCRAGEIDDRCRKFLREVPEHIALQAIDEFMSTERKNIRKVSAYFMGLIRKHADNYRELVSLGASGGP--PPGVPSPYEAGMKRIREYQDMCAQNQVQQQQQQQLRPQGT-SALMERIAGAPAKVRAGIADLIEKGIAVEWDIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRYKSG 2138 +P ++ L ++ +G C + DDR L ++ E A++A+ EF + E +R SA++MGL RK+ + R A GG P VPS Y +G Y + QG+ SAL +R+ +L G + +D R A LPE+ + + E + +R+RN SAY+MGL K++ +G Sbjct: 288 LPPTVSDALQRVFTSGVCHPSQFDDRAMDILVDLAEPDAVRALSEFAAMEPGRVRNPSAFWMGLARKYKGHSR------APGGRMGPDSVPSNYGSGFDPSDGYGRSTS-------------AQGSFSALDQRLD-----------ELANNGTLLRNVLDDRALEALRRLPEQDGLAVLAELP--EPARVRNPSAYVMGLCKKFANG 462
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A7S0T633_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T633_9RHOD) HSP 1 Score: 70.5 bits (171), Expect = 4.920e-9 Identity = 65/256 (25.39%), Postives = 104/256 (40.62%), Query Frame = 3 Query: 1518 SEMVPASIQLRLDQMTATGFCRAGEIDDRCRKFLREVPEHIALQAIDEFMSTERKNIRKVSAYFMGLIRKHADNYRELVSLGASGGPPPGVPSPYEAGMKRI----------------------------------------REYQDMCAQNQVQQQQQQQLRPQGTSALMERIAGAPAKVRAGIADLIEKGIAVEWDIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRYKS-GAPPPPGLT 2162 S +P + ++++ + C +ID+R FL +PEH+AL A+++ + IR A+ M + ++ + RE+ +S GP P S Y AG I DM A + Q Q QQ+ +AL P V G+ + G+ D R + L E +A+ A+ EFAS + R+RN SA+ MGL ++YK+ G PG + Sbjct: 85 SSGLPPKVFDAVERLFSDSICEREDIDNRALDFLATLPEHVALTAVEDISHRDFSTIRNRPAFVMSIFKRVVNPPREMHP--SSSGPGPYGSSGYGAGRGPIGGGPRGPLPPQRGNGMGGPPSRVLMGPPGXXXXXXXXXXXAGGMDMYAVPKPHQLQPQQVVTVDPAALSH----LPPMVADGLQRVFAAGVCHPSQFDDRAMEILINLKEVEAIRALNEFASVEPGRVRNPSAFWMGLARKYKALGDAGGPGTS 334
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Match: A0A7S0M3R0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M3R0_9CRYP) HSP 1 Score: 65.9 bits (159), Expect = 2.540e-8 Identity = 33/89 (37.08%), Postives = 48/89 (53.93%), Query Frame = 3 Query: 1887 PQGTSALMERIAGAPAKVRAGIADLIEKGIAVEWDIDVRVSNAFLGLPEEQAVEAIEEFASCDMSRIRNKSAYLMGLLKRYKSGAPPPP 2153 P AL ER G P V + + ++G D++ RV +A +PE A+ A+++F D +RIRNK AYL G++K K G P P Sbjct: 135 PARVQALGERKEGFPKSVHDALEIIFKEGTLKREDVEERVLDALRAIPEADALRALDQFGQGDQARIRNKGAYLWGIIKNAKDGRPKLP 223 The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1178.1534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig1178.1534.1 >prot_L-elsbetiae_contig1178.1534.1 ID=prot_L-elsbetiae_contig1178.1534.1|Name=mRNA_L-elsbetiae_contig1178.1534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=674bp MGDTKPVVAVEGEKPAEDQQQLENEATASPTEEATPAAAAPAPAAPAVAVback to top mRNA from alignment at L-elsbetiae_contig1178:2513..15247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-elsbetiae_contig1178.1534.1 ID=mRNA_L-elsbetiae_contig1178.1534.1|Name=mRNA_L-elsbetiae_contig1178.1534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=12735bp|location=Sequence derived from alignment at L-elsbetiae_contig1178:2513..15247+ (Laminarionema elsbetiae ELsaHSoW15)back to top Coding sequence (CDS) from alignment at L-elsbetiae_contig1178:2513..15247+ >mRNA_L-elsbetiae_contig1178.1534.1 ID=mRNA_L-elsbetiae_contig1178.1534.1|Name=mRNA_L-elsbetiae_contig1178.1534.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=4044bp|location=Sequence derived from alignment at L-elsbetiae_contig1178:2513..15247+ (Laminarionema elsbetiae ELsaHSoW15)back to top |