mRNA_L-elsbetiae_contig11760.1525.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11760.1525.1
Unique NamemRNA_L-elsbetiae_contig11760.1525.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: A0A6H5KJA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJA9_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 4.870e-46
Identity = 160/471 (33.97%), Postives = 217/471 (46.07%), Query Frame = 3
Query:   18 LTMIPSPQQQKWPRGSWNDLHQAAYRGSTERTLALLSRGSINIDQSCPKGYTPLMLA------------------VWVATRALPGSC*TGELTRP*RRIAVFVLYIFPLNADTSPRLPTWPGQAQTWTPRTVKVAHRFI*LRRKGTRRRRQH*SRPALK*TAFRR*GVRHCTWLH*MGIWVLSKSSFARMRTRC*A*HFSSGIAPVPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRG-PIVDYVNSCDSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLREPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRRRRG--VLVAPLLRYSSYP 1367
            +  +P PQQ+  PRG  N LH AA  GS E T  +L+ G+ +IDQ    G+T LMLA                  V +                             P+ A T+  L                               RR   + P    TA  +  V     L      +L+K+               SG   +PLD AA NGH  VV+ELI QVGI+GCGG SGGV AL+ AA+ ++     +++M +L +AGVVD G AL  AA    E  +KFLL+Q + R+      YVN+ D  G+TPL+  I  YR          P+VVRLL++AGADT+S + + N  GG  V    L   +N      +V G      EQ+++LEA+RRL+LRV+AV+AV WLW   P  +S     + R + +  A  T V   + + RRR RG  V +A LLRYSS P
Sbjct:    1 MPRVPRPQQR--PRGPSNRLHAAAECGSFEATATVLASGAFDIDQGNEYGWTALMLASRGGYARIVGMILNKGAQVSITXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVEATTTQHLCXXXXXXXXXXXXXXXXXXXXX---XXNLNSRRSDGATPLY--TAAWKGNVDAARLL------LLAKADPLLTTVPD-----PSGRTFLPLDAAAENGHPEVVNELIRQVGIDGCGGSSGGVRALQQAAQFKN-----LNIMVILTNAGVVDTGLALVVAAGYGGETPLKFLLEQARARKTMDEAAYVNTRDRGGVTPLLWGIQHYR----------PRVVRLLVEAGADTTSPVAVRNQLGGDDVSITPLGLTMNPVRDKVKVVGRGPASPEQLHKLEAIRRLLLRVEAVHAVSWLW---PSDISTITRAAARGTDRTTAISTAVTLPMLVTRRRARGRKVPLAALLRYSSKP 435          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: D7FT11_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT11_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 4.020e-45
Identity = 120/264 (45.45%), Postives = 158/264 (59.85%), Query Frame = 3
Query:  579 VPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVD--YVNSCDSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLREPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRR--RRGVLVAPLLRYS 1358
            VPLD AA +GH+ VV ELI ++GIEGC   S G  AL  AA +     QH+D+MA+L +AGVVD G AL  AA    E +VKFLL+ + +  G  V+  Y+N+ D +G TPL+    G  ++       +P++VR+L+DAGADT+S +++MN  GG VVF  T LA     L  K V   +   +E + RLEA+ RL+LRVDAV+AV WLW       SGA  + R T          +  MLPIL+RR  RR  LVA LLRYS
Sbjct:  280 VPLDLAAKHGHTDVVRELIQELGIEGCDATSAGAHALAFAASN-----QHLDIMAILTEAGVVDTGKALYLAAGMGHEASVKFLLRHRHKEGGCGVEGAYLNARDVNGYTPLVVCTQGCFSQ-------APRIVRMLVDAGADTTSPVQVMNLKGG-VVFNDTPLAFTKLRLRKKIVADGKPATKEHLQRLEAICRLLLRVDAVHAVSWLW------PSGAPFIGRATETDPEPPLPALKLMLPILKRRTKRRCGLVATLLRYS 524          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: D8LJF9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF9_ECTSI)

HSP 1 Score: 163 bits (412), Expect = 6.330e-41
Identity = 118/272 (43.38%), Postives = 159/272 (58.46%), Query Frame = 3
Query:  579 VPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSCDSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWL-------REPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRRRR--GVLVAPLLRYSSYP 1367
            +PLD AA NG+  V+ ELI +VGIEGCGG+S G  AL +A   R      V  MA+L  AGVVD G AL  +A   RE +VK+LLQ   +  GP   YVN  D +G TPL+SSI+    ++  +    P+V RLL++AGADT++ LR  N+ G  V+F  T L L    L  K+V G   +++ +++RLE +RRL+L+V+AV+A  WLW        R P     AAEV+  T+  AP  G     +LPILRRR R  GV+   L R+   P
Sbjct:  171 LPLDSAARNGNLLVMRELIQRVGIEGCGGQSRGEVALLMAGEGRR-----VAAMALLTHAGVVDTGQALTISAGLGREASVKYLLQNHAKHYGPGA-YVNVRDRNGTTPLLSSIYVCGVDEQSS---FPRVARLLVEAGADTTTELRRTNSMG-VVLFSCTPLKLTVHILQDKKVDGTYISKQ-RLWRLEGIRRLLLQVEAVHAESWLWPSSSGDGGRRP---DNAAEVTTATNAAAPKLGR----VLPILRRRARRPGVVWTALCRHQRKP 424          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: D7G1H7_ECTSI (EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1H7_ECTSI)

HSP 1 Score: 157 bits (398), Expect = 7.210e-39
Identity = 117/273 (42.86%), Postives = 156/273 (57.14%), Query Frame = 3
Query:  555 HFSSGIAPVPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAG-VVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSC-DSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLR-EPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRR--RRGVLVAPLLRYS 1358
            H   G++ VPL+ AAL+G+  V  E+I QVGI GCGG SGGV AL+ AA       +H++ MA+L+DAG VVD G AL  AA   R   VKFLL+   RR+     YVN   D  G TP++ ++     + G  RL SPK+VRLL+DAGA+T+ A+ +            T LA   R L   RV G E   +EQ+ RL+  R L+ R +AV+AV WLW   EP  ++ AA    +T   + A  T +  M P+LRR+   RGVL+  L RYS
Sbjct:  176 HTPMGVSYVPLEMAALHGNPDVAREMIRQVGIRGCGGPSGGVEALRQAADE-----EHLEFMAVLLDAGGVVDTGPALILAAENGRAVAVKFLLR---RRQADADAYVNGTRDPYGRTPVMCAV-----DVGAGRLCSPKIVRLLVDAGANTTRAVGVTRITPRWEKTSETPLAFTTRLLREGRVDG-EAATKEQLQRLKDTRCLLSRAEAVHAVSWLWASGEPPRIAQAAG-DTKTETASTAVATPLRAMSPMLRRKPGTRGVLLKTLFRYS 433          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: A0A6H5KQV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV0_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.340e-38
Identity = 159/469 (33.90%), Postives = 219/469 (46.70%), Query Frame = 3
Query:   27 IPSPQQQKWPRGSWNDLHQAAYRGSTERTLALLSRGSINIDQSCPKGYTPLMLA------------------VWVATRALPGSC*TGELTRP*RRIAVFVLYIFPLNADTSPRLPTWPGQAQTWTPRTVKVAHRFI*LRRKGTR--RRRQH*SRPALK*TAFRR*GVRHCTWLH*MGIWVLSKSSFARMRTRC*A*HFSSGIAPVPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPI-VDYVNSCDSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGG--VEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLRE-PLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRRRRGVLVAPLLRYSS 1361
            +P PQQ  WP G  N L  AA  GS +    LL+ G+ +IDQ    G+TPLM+A                  VWV                              L+A T     T P      T     V      L + G+    RR   + P    TA     V        + +W+L  +    + T       S     +PLD AA NGH  VV+ELI QVGI+GCGG SGG  AL+ AA         +D+MA+L DAGVVD G AL  AA    E  +KFLL+Q + R+      Y+N+ +  G+T L+         DG+ R   P+VV+LL++AGADT+S + L+ N  G+  F  T L L   CL    +GG   +    E+  +LE +RRL+LR +AV+AV WLW  + P +    A+ + RT+  + A+   +  M+    R R+G+L A LLRYSS
Sbjct:    4 VPLPQQ--WPHGPSNPLQAAADCGSFKTAANLLASGAFDIDQGNEVGWTPLMMASRGGYPRIVRMLLNKGAQVWVTDXXXXXXXXXXXXXXXXXXXXXXXXXXALLDAATKQNHCT-PLDCAAETGCAASVTA----LLKAGSNINTRRSDGATPLY--TAAWNGNV--------VAVWLLLLAKADPLLTCA---SDSGKERFLPLDVAAQNGHREVVNELIRQVGIDGCGGSSGGENALRQAALF-----SRLDIMAILTDAGVVDTGLALVVAAGYGGEAPLKFLLEQARGRKSTDRAAYMNTLNGVGLTSLL---------DGIQRC-RPRVVQLLVEAGADTTSPV-LICNQPGEDDFHITPLGLT-MCL----LGGRSAKPLTMEEQNKLEVIRRLLLREEAVHAVSWLWPSDTPTITHATAKGTGRTTATSTAATPFIMLMIGRRTRGRKGLLAA-LLRYSS 430          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: D7FVU3_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVU3_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 1.990e-38
Identity = 117/270 (43.33%), Postives = 157/270 (58.15%), Query Frame = 3
Query:  561 SSGIAPVPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGG-ALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSC-DSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLREPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRR--RRGVLVAPLLRYS 1358
            SSG + VPL+ AA  G S VV EL+ + GI  CGG SGG+ AL++AA         VD+M+MLMDAGVVDP G AL  A    +E  V FLL+QQ+ R      YVN   D  G+T L+ S  G + +       +P++ R L+DAGADT+SA++L        V   T L  VN     +   G     +EQ+ RLEA RR++LRV AV+AV W+W  +  L++  A  S RT++ +P   TQ+ T+LP+LRRR  RR +L   L RYS
Sbjct:  152 SSGRSFVPLEVAAQTGRSAVVSELLREFGIRCCGGPSGGLDALRVAAVYGQ-----VDIMSMLMDAGVVDPVGLALLAAVGSGKEAAVGFLLRQQEERWQ--TSYVNIARDDDGLTALLWSFRGNKNKP-----CNPRITRRLVDAGADTTSAVQLRAKRSRTCV-NVTPLEYVNDWA-LRETNGDHPATDEQLLRLEATRRVLLRVVAVHAVSWIWPSDAPLLARPAN-SPRTAKHSP---TQLTTVLPVLRRRAGRRALLWDTLFRYS 403          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: D7FVK3_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVK3_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 1.340e-36
Identity = 116/267 (43.45%), Postives = 147/267 (55.06%), Query Frame = 3
Query:  579 VPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSC-DSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWL----REPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRRRRG--VLVAPLLRYS 1358
            +PLD AA NG   VV EL+ + GI GCGG +GGV AL+LAA      + H+DVM  L  AGVVD G AL  A      + VKFLLQQQ         YV+   D  G TPLI +I     + G+ +  SPKVVRLL+DAGADT+S +R     G   V   T L+L    L  K +   +   +E + RLE +RRL+LRV+AV+A  WLW     R  L   G A     +S     +  Q+ T+LPILRRR RG   + A L RY+
Sbjct:  185 LPLDTAAQNGRLGVVLELLQRFGIRGCGGGTGGVTALQLAAM-----KPHMDVMLALTTAGVVDTGIALVKATSFGHMDVVKFLLQQQNGTPSEKSAYVSRPRDPCGRTPLICNI-----DVGLNQSCSPKVVRLLVDAGADTTSIVRFTIQPGTLPVVC-TPLSLATEALRIK-IAYRKAIPDELLRRLELIRRLLLRVEAVHATSWLWQNGVPRVGLPAGGTAATETESS---STTAPQLRTVLPILRRRARGRGFVSASLCRYA 436          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: A0A6H5K037_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K037_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 1.020e-35
Identity = 110/262 (41.98%), Postives = 139/262 (53.05%), Query Frame = 3
Query:  564 SGIAPVPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSC-DSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLREPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRR---RRGVLV 1337
            SG   VPLD A  +GHS VV EL HQ+G+ GCGG SGGV +L+LA        Q VD+M +L   GVVD G AL  AA   REE+VKFLLQ Q    G    YVN+  D  G TPL+ +I    +        SP++ R LIDA ADT S + L+   G     R T L      L   +VG    T EEQ+  L+A+ RL+ +VDAV+AV WLW       S A  V   +SR  P     +   +P + R    +RGV+V
Sbjct:  167 SGATFVPLDVAVQHGHSEVVRELTHQLGVRGCGGVSGGVESLRLATTE-----QDVDIMGILTVGGVVDTGRALVVAAENSREESVKFLLQHQ---AGGGAWYVNNTLDPFGRTPLVCTIEACGSS-------SPRIARFLIDAEADTKSTV-LVTKSGQWTTSRDTPLGFATHSLRQNKVGRKNAT-EEQLRSLKAIHRLLSQVDAVHAVSWLWRSSDTRNSYA--VGAASSRMKPTIAGPLLKRMPTVLRTTVGKRGVVV 409          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: D7G1U9_ECTSI (EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U9_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.150e-35
Identity = 139/440 (31.59%), Postives = 183/440 (41.59%), Query Frame = 3
Query:   45 QKWPRGSWNDLHQAAYRGSTERTLALLSRGSINIDQSCPKGYTPLMLAVWVATRALPGSC*TGELTRP*RRIAVFVLYIFPLNADTSPRLPTWPGQAQTWTPRTVKVAHRFI*LRRKGTRRRRQH*SRPALK*TAFRR*GVRHCTWLH*MGIWVLSKSSFARMRTRC*A*HFSSGIAPVPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSC-DSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLREPLLVSGAAEVSRRTSRKAPAS-GTQVATMLPILRRR--RRGVLVAPLLR 1352
            Q WPRG  N LH+AAY GS +R  ALLS GS++I+Q  PKG+TPLMLA       +  S                   +    A+ S       G                                                                                           +GHS VV ELI Q+G+ GCGG S GV +L+LAA       Q+VD+M +L   GVVD G AL  AA   REE+VKFLLQ Q    G    YVN+  D  G TPL+ +I    +        SP++ R LID GADT S + L+   G     R T L    R L   +VGG   T EEQ+  L+A+ RL+ +++AV+AV WLW      +  A  V   +SR  P + G  +  M  +LR    +RGV++  + R
Sbjct:   26 QLWPRGPTNQLHKAAYHGSADRVDALLSTGSVDINQGNPKGWTPLMLATEKGHSLVAKS-------------------LLEKGANVS---VAGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQKQHGHSEVVRELIQQLGVRGCGGVSAGVESLRLAATE-----QYVDIMGILTVGGVVDTGRALVVAAEYSREESVKFLLQHQ---AGGGTWYVNNTLDPFGRTPLVCTIEACGSS-------SPRIARFLIDDGADTKSTV-LVTRSGEWTTSRDTPLGFATRSLRQNKVGGKNAT-EEQLRSLKAIHRLLSQIEAVHAVSWLWRSSDTPIGHA--VGAASSRMKPTTAGPTLKRMSTVLRTTVGKRGVVLRAVYR 424          
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Match: A0A6H5KSA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSA9_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 4.920e-35
Identity = 101/265 (38.11%), Postives = 147/265 (55.47%), Query Frame = 3
Query:  579 VPLDGAALNGHSRVVHELIHQVGIEGCGGESGGVAALKLAARSRHDRRQHVDVMAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSCDSSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHGGKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVNAVPWLWLREPLL-VSGAAEVSRRTSRKAPASGTQVATMLPILRRRR-RGVLVAPLLRYSSYP 1367
            +PLD A ++ H+ VV +LI Q+GI+GCGG S G  A + A ++     Q  D++ ML D G +D G  L +AA+   E  VK LLQQQ+ +      YVN     G TP++  I G     G     SP+V+RL +DAGADT+S +R+ N  G ++ FRGT LA     L  ++  G++ T+ E    LEAVRR++L+++A+ AV W W  + L  +  A +  R  ++      T +   LP  R+ R R VLV  + RYS  P
Sbjct:  348 LPLDAAVISKHAAVVRKLIQQLGIQGCGGASAGADASRWAVQT-----QQYDIVVMLADTGEIDTGRVLIDAAKFGSEALVKILLQQQRGKHMDWDTYVNKKQPDGRTPVVCRI-GRALRSG-----SPRVLRLFLDAGADTASTVRITNKEGVQL-FRGTPLAYTTWLLRDQQARGIDSTKGEPCS-LEAVRRMLLQLEAIRAVSWCWQSDALSSIERAVQDGRPRAKSRLTVDTPLGLTLPRRRKARARRVLVMAMSRYSRKP 599          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11760.1525.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJA9_9PHAE4.870e-4633.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FT11_ECTSI4.020e-4545.45EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D8LJF9_ECTSI6.330e-4143.38EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
D7G1H7_ECTSI7.210e-3942.86EsV-1-199 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1... [more]
A0A6H5KQV0_9PHAE1.340e-3833.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVU3_ECTSI1.990e-3843.33EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
D7FVK3_ECTSI1.340e-3643.45EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5K037_9PHAE1.020e-3541.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G1U9_ECTSI1.150e-3531.59EsV-1-199 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5KSA9_9PHAE4.920e-3538.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11760contigL-elsbetiae_contig11760:1404..4259 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.2
Seed ortholog evalue3.6e-29
Seed eggNOG ortholog2880.D7FT11
Hectar predicted targeting categoryother localisation
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG4177@2759
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1723
Cds size633
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11760.1525.1prot_L-elsbetiae_contig11760.1525.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11760 2141..3906 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815379.466785-UTR-L-elsbetiae_contig11760:1403..21401622815379.466785-UTR-L-elsbetiae_contig11760:1403..2140Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11760 1404..2140 +
1691682869.2076025-UTR-L-elsbetiae_contig11760:1403..21401691682869.2076025-UTR-L-elsbetiae_contig11760:1403..2140Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11760 1404..2140 +
1622815379.509613-UTR-L-elsbetiae_contig11760:3906..42591622815379.509613-UTR-L-elsbetiae_contig11760:3906..4259Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11760 3907..4259 +
1691682869.2553084-UTR-L-elsbetiae_contig11760:3906..42591691682869.2553084-UTR-L-elsbetiae_contig11760:3906..4259Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11760 3907..4259 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815379.4784062-CDS-L-elsbetiae_contig11760:2140..27541622815379.4784062-CDS-L-elsbetiae_contig11760:2140..2754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11760 2141..2754 +
1691682869.2211595-CDS-L-elsbetiae_contig11760:2140..27541691682869.2211595-CDS-L-elsbetiae_contig11760:2140..2754Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11760 2141..2754 +
1622815379.4878738-CDS-L-elsbetiae_contig11760:3887..39061622815379.4878738-CDS-L-elsbetiae_contig11760:3887..3906Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11760 3888..3906 +
1691682869.237638-CDS-L-elsbetiae_contig11760:3887..39061691682869.237638-CDS-L-elsbetiae_contig11760:3887..3906Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11760 3888..3906 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11760.1525.1

>prot_L-elsbetiae_contig11760.1525.1 ID=prot_L-elsbetiae_contig11760.1525.1|Name=mRNA_L-elsbetiae_contig11760.1525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=211bp
MAMLMDAGVVDPGGALQNAARCVREETVKFLLQQQQRRRGPIVDYVNSCD
SSGMTPLISSIHGYRTEDGVARLISPKVVRLLIDAGADTSSALRLMNNHG
GKVVFRGTLLALVNRCLHTKRVGGVEDTREEQMYRLEAVRRLVLRVDAVN
AVPWLWLREPLLVSGAAEVSRRTSRKAPASGTQVATMLPILRRRRRGVLV
APLLRYSSYP*
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mRNA from alignment at L-elsbetiae_contig11760:1404..4259+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11760.1525.1 ID=mRNA_L-elsbetiae_contig11760.1525.1|Name=mRNA_L-elsbetiae_contig11760.1525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=2856bp|location=Sequence derived from alignment at L-elsbetiae_contig11760:1404..4259+ (Laminarionema elsbetiae ELsaHSoW15)
CCAGGGCACCCACAGAGCTCACGATGATTCCTTCCCCACAGCAGCAGAAG TGGCCTCGGGGCTCGTGGAATGACCTCCACCAGGCCGCCTACCGTGGGTC CACCGAGCGCACACTAGCACTGCTCTCGAGGGGATCGATCAACATTGACC AAAGCTGTCCCAAAGGCTATACTCCCCTCATGTTAGCCGTCTGGGTGGCC ACTCGCGCGTTGCCAGGGTCTTGCTGAACGGGGGAGCTAACGCGTCCATA GCGGCGGATAGCGGTGTTTGTGCTCTACATTTTCCCGCTCAACGCGGACA CCTCGCCGCGACTACCGACTTGGCCAGGGCAGGCGCAGACGTGGACGCCA AGAACAGTGAAGGTGGCACACCGCTTCATCTAGCTGCGCAGGAAGGGCAC TCGGAGGCGACGGCAGCACTGATCGAGGCCGGCGCTGAAGTAGACAGCCT TTCGGAGATAGGGCGTACGCCATTGTACCTGGCTTCATTGAATGGGCATT TGGGTCCTGTCAAAGAGCTCCTTCGCGCGAATGCGAACCCGGTGTTGAGC GTGACACTTTTCATCGGGAATAGCCCCCGTCCCGCTGGATGGTGCGGCGC TCAATGGGCACTCGAGGGTGGTACACGAGCTGATCCATCAGGTCGGGATC GAAGGTTGCGGCGGTGAAAGCGGCGGTGTAGCTGCCCTCAAATTGGCCGC TAGAAGCCGGCATGATAGAAGGCAGCATGTGGACGTCATGGCCATGCTGA TGGACGCTGGGGTAGTAGATCCAGGAGGAGCCTTGCAAAACGCCGCAAGA TGTGTTCGGGAGGAGACCGTGAAGTTCCTGTTGCAGCAGCAGCAGCGACG GCGGGGCCCCATCGTTGACTACGTTAACTCCTGCGACTCTTCCGGCATGA CGCCCTTGATCTCTAGTATTCATGGTTACCGTACCGAGGACGGCGTGGCC CGTCTGATTTCGCCGAAAGTGGTGCGGTTGCTTATCGACGCCGGAGCGGA CACGTCATCGGCCCTCCGTCTCATGAACAATCATGGGGGTAAGGTGGTAT TCCGTGGCACACTGCTTGCTTTGGTCAACCGTTGTCTCCATACGAAGAGA GTGGGAGGGGTAGAAGACACGAGAGAGGAGCAGATGTACAGGCTTGAAGC TGTCCGCCGCTTGGTGTTGCGGGTAGATGCAGTAAATGCCGTCCCTTGGT TGTGGCTCAGGGAGCCCCTCCTGGTTAGCGGTGCTGCAGAAGTTTCAAGG AGGACCTCCAGGAAGGCTCCAGCCAGTGGCACGCAGGTGGCGACGATGCT GCCGATCTTGAGGCGCAGGAGACGCGGTGTTCTTGTGGCGCCCCTGCTCA GGTGAGATTATATTTGTGTGCTGTCGAGGTATCTATGTAGTGGAAGTTTT TTTTTTCTAGACTTAGACTATGCTTCGAAGTACTGTAATATTGCTGGGAA TTTGGCTTCCGCCGGTTTGTATGGGAGCGCACAGTTGCCAAGAAAATCAA CGTTTTTCGCAACTTTGTGTTCGGAACTTTGATCAGTTGAGCATTTTTGG TAACGCTCTTTATGGGGCGAAACATTTTTGTTTACAGGACTGGTGGAATG CGGGGCGTGATTCCTGTTATTTTTTTAGCGACGGCGAGTAGCAAGCATGC GTCTGCATACACAGCGCGAAACCAGCCAGATACGGCCAAATTGTCCCACA AAAGCATGGAAAGCGAGTTGGTGGTATCGAATCTAGCACCATGCTTTTCA ATCGAAACTAGAAAGACCTCAATCGTGCTCTCACTTGACAACTCTGTTGG CACAAATTCATTACGCATTTATTGTGCACGTCTGTTGCGTGGATCGCATG TGTGCGCGTGGCAGGAGAGGGTTAACTTGTGTGAGAGGAGTAGGTGCTTG GCGTGAATTGGCTCAATCAAGTCCCGCCGCTCAACTTTACTTCGCCACAT TTTCTCTCTGCAAAGTTTGCAAGGTTTTGCTCTCGATCGGACCATTTTTG TGCAAAGTCAAAGTTTCGCAACTTTGTTGGCATCTTTGTGCTCCCATAAA AGAGCACATATACGAAGTATGACAAAGTTGCAGGGGAAAGTTCAGAAAAT TTGACTTTCTTCGCCAACTATGTGCTCCCATAAAAATCGGTGTTACTTGT ATGTTTGATCGGTTTAGAGCTGTCTGCTGTTATGGATGCTGCTGTGGTGC CCTTTGTTTCTCTAGGTCCAGCCTGTTGATGTTGCTCCTAGAGAAATAAC ACTCGCTAATGTTTGCGGCGCCACGTCTCCGTCGGTTGAGTTCTTTCCCA CAGGAGAATACCGTGCGCAGGGTACTCATCGTCTTGTGCTTCTGTCACGT GGTACACGCTGGGGATGAATCAAGCTTAAGCAGTTCACTGCCCGCCTTAC GCTCAATACGACCTGGACCGATACGGCATTTCAGTAACGCTACTTGTTTT CGCCGTCTTGCCGCACAACCGCTCGCTCATTCAGGTATTCGAGCTATCCT TGATGCGCAGCGGCTGGCGCGTGTTGTGCCAAGCGACGTTTTGGTCGACA TATATATTTTGCCCGGCTAATGAAGGGGCGCTTGGAACACTCTCTTTAGA TCTCCAGCAATTTGATCTCCAGCCGCAGCCGTGCCAGCGCCATTGGTGTT TCATCGGAAAGAGCAGCTTCGGATGAACTGCATATGTACATGGTCGACGA GGTGGTGTAGAATACAAAACTGTCTCGGAATTGAGGACTTGGCTGCTGCG ATTTGTTTCTGCTCAATACCCCTTAAATGTTTATGTATGACATAATTAGC AGGTTTTAGTTGTCGACGCACACGCGGCCATTTGACTCCCCCCAGAGGGC GACGAC
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11760:1404..4259+

>mRNA_L-elsbetiae_contig11760.1525.1 ID=mRNA_L-elsbetiae_contig11760.1525.1|Name=mRNA_L-elsbetiae_contig11760.1525.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1266bp|location=Sequence derived from alignment at L-elsbetiae_contig11760:1404..4259+ (Laminarionema elsbetiae ELsaHSoW15)
ATGGCCATGCTGATGGACGCTGGGGTAGTAGATCCAGGAGGAGCCTTGCA
AAACGCCGCAAGATGTGTTCGGGAGGAGACCGTGAAGTTCCTGTTGCAGC
AGCAGCAGCGACGGCGGGGCCCCATCGTTGACTACGTTAACTCCTGCGAC
TCTTCCGGCATGACGCCCTTGATCTCTAGTATTCATGGTTACCGTACCGA
GGACGGCGTGGCCCGTCTGATTTCGCCGAAAGTGGTGCGGTTGCTTATCG
ACGCCGGAGCGGACACGTCATCGGCCCTCCGTCTCATGAACAATCATGGG
GGTAAGGTGGTATTCCGTGGCACACTGCTTGCTTTGGTCAACCGTTGTCT
CCATACGAAGAGAGTGGGAGGGGTAGAAGACACGAGAGAGGAGCAGATGT
ACAGGCTTGAAGCTGTCCGCCGCTTGGTGTTGCGGGTAGATGCAGTAAAT
GCCGTCCCTTGGTTGTGGCTCAGGGAGCCCCTCCTGGTTAGCGGTGCTGC
AGAAGTTTCAAGGAGGACCTCCAGGAAGGCTCCAGCCAGTGGCACGCAGG
TGGCGACGATGCTGCCGATCTTGAGGCGCAGGAGACGCGGTGTTCTTGTG
GCGCCCCTGCTCAGATGGCCATGCTGATGGACGCTGGGGTAGTAGATCCA
GGAGGAGCCTTGCAAAACGCCGCAAGATGTGTTCGGGAGGAGACCGTGAA
GTTCCTGTTGCAGCAGCAGCAGCGACGGCGGGGCCCCATCGTTGACTACG
TTAACTCCTGCGACTCTTCCGGCATGACGCCCTTGATCTCTAGTATTCAT
GGTTACCGTACCGAGGACGGCGTGGCCCGTCTGATTTCGCCGAAAGTGGT
GCGGTTGCTTATCGACGCCGGAGCGGACACGTCATCGGCCCTCCGTCTCA
TGAACAATCATGGGGGTAAGGTGGTATTCCGTGGCACACTGCTTGCTTTG
GTCAACCGTTGTCTCCATACGAAGAGAGTGGGAGGGGTAGAAGACACGAG
AGAGGAGCAGATGTACAGGCTTGAAGCTGTCCGCCGCTTGGTGTTGCGGG
TAGATGCAGTAAATGCCGTCCCTTGGTTGTGGCTCAGGGAGCCCCTCCTG
GTTAGCGGTGCTGCAGAAGTTTCAAGGAGGACCTCCAGGAAGGCTCCAGC
CAGTGGCACGCAGGTGGCGACGATGCTGCCGATCTTGAGGCGCAGGAGAC
GCGGTGTTCTTGTGGCGCCCCTGCTCAGGTATTCGAGCTATCCTTGAGTA
TTCGAGCTATCCTTGA
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