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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 601 |
| Cds size | 408 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815372.409355-UTR-L-elsbetiae_contig117:36675..36868 | 1622815372.409355-UTR-L-elsbetiae_contig117:36675..36868 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig117 36676..36868 + |
| 1691682866.661862-UTR-L-elsbetiae_contig117:36675..36868 | 1691682866.661862-UTR-L-elsbetiae_contig117:36675..36868 | Laminarionema elsbetiae ELsaHSoW15 | UTR | L-elsbetiae_contig117 36676..36868 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622815372.4202-CDS-L-elsbetiae_contig117:36868..37186 | 1622815372.4202-CDS-L-elsbetiae_contig117:36868..37186 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig117 36869..37186 + |
| 1691682866.6708229-CDS-L-elsbetiae_contig117:36868..37186 | 1691682866.6708229-CDS-L-elsbetiae_contig117:36868..37186 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig117 36869..37186 + |
| 1622815372.430765-CDS-L-elsbetiae_contig117:41453..41543 | 1622815372.430765-CDS-L-elsbetiae_contig117:41453..41543 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig117 41454..41543 + |
| 1691682866.6796858-CDS-L-elsbetiae_contig117:41453..41543 | 1691682866.6796858-CDS-L-elsbetiae_contig117:41453..41543 | Laminarionema elsbetiae ELsaHSoW15 | CDS | L-elsbetiae_contig117 41454..41543 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-elsbetiae_contig117.1477.1 >prot_L-elsbetiae_contig117.1477.1 ID=prot_L-elsbetiae_contig117.1477.1|Name=mRNA_L-elsbetiae_contig117.1477.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=136bp
MKRGTREPFARAGSPNSPVPSPSSAGKRRRLLNSDDGPSSQEPPYGPFQA
LLAEHGVAWPSAEAMADEDSEKRSLGFSCRSNPSKLRVGVERALVHDGAR
RSEFVESMEGFIAGPNQAFRRALLPLDCCSGGNSRG back to topmRNA from alignment at L-elsbetiae_contig117:36676..41543+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_L-elsbetiae_contig117.1477.1 ID=mRNA_L-elsbetiae_contig117.1477.1|Name=mRNA_L-elsbetiae_contig117.1477.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=4868bp|location=Sequence derived from alignment at L-elsbetiae_contig117:36676..41543+ (Laminarionema elsbetiae ELsaHSoW15)
GTCAGGAGGCCCGGCCAAAGGGCTGCGCACAGCACAGGTGTACAAGATCG
GTAAATCTCGCTGGTCCTGAGCGTGCTATCGACGGCTGATTTTTCTTGTG
CTCGCCAGGCGCGCGGAAGAGTGCGTTCGTTCCAAAAAGAGACACGGAAA
TTCAAACTCACGCGCCCGGCGAGTAATTATCGCAGTTTCCGCCATGAAGC
GTGGTACTCGCGAGCCCTTCGCCAGGGCCGGCTCCCCGAATTCTCCGGTG
CCGTCTCCTTCATCAGCAGGCAAGCGGAGACGGCTGCTCAACAGCGACGA
CGGGCCGTCAAGCCAAGAGCCGCCTTACGGGCCGTTCCAAGCCCTCCTCG
CCGAACACGGAGTGGCATGGCCCTCTGCGGAGGCGATGGCGGACGAGGAC
AGCGAGAAGAGGTCGCTGGGGTTCTCCTGCCGCAGCAACCCCTCGAAGCT
AAGGGTTGGGGTCGAGAGGGCGCTGGTGCACGATGGAGCTCGTCGAAGTG
AATTCGTAGAGGTGAACCTGACAACATAATTTCAAACAGTTTTTTTTTTT
TGCATCATGTGTCCGAGGAGCCGAGGAGAGCACATGTTCGTCGCCCCGGT
GGTCTTATTGGTACCCACGCAACCTTCGACGAACTAGATCGTGGGATAGA
GCCCCTGCGAAGCGAGTTTTTTACTCACATTCGTTTCATGGAAAATTCAT
TGGGAGCGATTTCGTTAGTAAATATGAATATTACTTCGACTTGGTTGTTG
AAAAGGGTGGGGAGAGTGCTGAACCCTGCTCGCGATAAAAACATTACAGG
CAGGCACCCCAGGAGGGGGACCACCCCCTGACCCCGGTTGGGTCGTCTAG
CTAGTTGTAGTGGAGTATGGGGATCAGTAGGGCAGACGATGAATATGCCA
ATAATGGGAGGAGAAAATAGGGAAAACGACGCAACAGGGTTACCCTGGTA
GAACCACGACATACTTCATAAGCTGGGTACCCCTTTCCACAAACACACGC
GCATTGCTGATTGGCCAGCGCCACCATTGACCCGGTTCTGGTGCCGTTCG
CCCATGGGTATACCTTGCTGGGTCTTTCTTTGTCCCTAATTGCACCCTGC
TGCTCCCGATCTGTACCCTATTCAGACGGGAAATTGCCCCGCACTAAGAC
TCTTCTGCCCGCTGTACGGCACATCAAACCACAGGCACAACACCCCGCGT
TTGATGCTACCCACGGACAAACATATGGGAAAACCGAAGTAAGTCGGCGG
CGCACAACACGGCGTAACAAACCACAACCATGGCATAAACACACACATAT
GGGATATCCCAGGTCGAGTCGGCGCCCAGACACAGCCATCGCAAAAAAAC
CCGCGTTATTTTACACACACATAAGATGTATGGGATATGTATGTATGTAT
GGGATATTCCAAGTCGGGGCAGAAACCGGCGTAACAAACCACAGCCAGCA
CAGGGCAAAACTCAAAGGACACCGGCGATACACGCGTCAGCATCCACTTC
ACACCCACACCCACCCACATACACAAACCACACACTCCGGCGCCCACGGA
AGGGGGCGTTACCTACCATTTACCTGCTATTTATTTAGGCTACAACCACT
TGTTTTTCAAAACTACAAGGCCTGTGGTACGGGTGGTGAATCAACCATGG
GAGAGAGCTGATGAAGTGTGGCTGTGTCTATGCGCCGACTCGACCTGGGA
TATCCCATATGTGTGCGTTTATGCCCATGGTTGTGATTTGTTGCGCAGTG
TTGTGCGCCGCCGACTTCTTCGGTTTTCCTTAATATGTTTGTCCGTGGGT
AGCATCAAACGCGGGGTGCTTTGCCATGGCTGTGGTTTAATATGCCGTAC
AGCGGGCAGAAGAGTCTTAGTGCGGGGCAATTTCCCGTCTGAATAGGGTA
CAGGTCGGGAGCAGCAGGGTACAATTTGGGACAAAGAAAGACGCAGCAGG
GTATACCCATGGGCGAACGGCACTAAACCGGGTCAATGGCGGCGCTGGCC
AATCAGCAATGCGCGTGTAATGTCTGTGGAAAGGGGTACCCAGCTATGTC
GTGGTTCTATCAGGGTAGGTGCGTCGTTTTCCCAAAAAAAACATGGAAGG
AGGAGAATGTTGAAAGAAAACAGCAGTTAAGGGGGGGGGTGACAACACTG
GGAAACATGCCCTCACAAAATCCCAAGACAAACACAAATCGGGCCCCCTC
TGCCTATTCAAAAACCAAGTTAAACCGCTTAGCTTCTCAAAAAGTTTAGA
ATTAGGTCTTCTCCGTACTACACAGCTCTGTGCGTAGAGGACACCATGGA
GAAGGTGTGATGCGTGCTGGCATGTGCAGATCTGCTTCTGAGGCGGAGTT
ATCGAGCACCGCAGCAGTCCTGCAGAACTCCGCAATCTGGGCCAACGACA
GCAGACATCCACTGCTGTGCTCGCCACCGCAGATCCCAACCTCCACAACC
ATGGGTACCCGCAATTCAGGAAGTCGGGGTCTGTGGCGGCGAACTCAGCA
GTGGATATTTGCAGTCGTCGGCCGATTGCGGAGTTCTGTGGAGCTACTGC
TGCAGTGCTCCATAACTCCACCCCAGCAGTAAATATTCACATGCCAGCAC
GCATCACACCCTTCTCCATGGTGTCCTCTACGCACAGAGCTGTGTAGTAC
GAAAAATCTCTTATCCCGAACCTTATTTTGGACTACCGCAAAATGGCCTG
TTGTGTCTTGGTTTTATAGTGCGTTTTTTTTGTTTTAATTTTAAAGTTCG
CGGTTGGAGGTAGACTGTGTGATGTGTATGCCAAGAACAGCCCCGCTACC
CGCTGGGTGGGCGAATTAACAGCTTTCTTCTTGCGCAACGCTCCCCTACT
GGTCCGGTAGATCGGTTGTATGCTTAATGTGTGCTTGTTCGGGCATTTTC
AAATTTGCCTAATTCCAAAAATCGTTGTCACCCCCTCCTTAATAAAAAAT
GGAACATAACTCACATTGGGACTCGACTCCACAACTCCACAATGGTTTGC
TTGCATTCAATCCAAGCAGTGCAGGAAGCTCATGCTTGAAATGGAACATC
CTTTTTCAAGTATGTTTTCCCCTCTGCTGCTGTGTGTCTCGAGTGAGAGA
TCTGCTGTATGGAGTCAGTCTACACACAGTAACTTCGACCTCATGGTAAT
TGATATCATTGTCACACAGTGATTACCGTAGGTGACACAAGAACCACACC
CCCTGTACACATTTCCAAAGCTCGATTCCTCCCCAGCAAGAAGAGCGCCA
GTGCCAAAAAGGGTAGCGTTGGAAAGATCTAGTCGAGGGCTGTCCGAAAA
TGTGTTGTTTGGAGCTGGCACCTTCTTCGTTACGGAGTAATCGAGCTCTA
AAATTCGATCCAGGGGGTGTGGTATCTTGTGTCACATACGGTAGCTGCTA
GTCATAGCGCGGGTATATTTTGTGTCTCAAGATATACGACGACCAACGGC
TTTTCTGTATCTCCGTAGATGCGGCGGAATGGTCTCCGCCGCCTCTGACT
GGTTTATAGTCTAGGATGAGAGTGTGCGTCACCGCCCACTCTCTCACACC
CGAGTAGCTCGTTAGCAAAAGGAAGGATAAACAAGTGAGTTAACTTTCTG
GCACCCGCTAGGGATTGACAGCGCGTCAACCTATCAGACTCACCGTCGAC
GAGGGAAAGGGATGGCTGAACCCTTCTCGCGACAAAAAGCTTTGGCAAGC
ACCGTAGAAGGGGGAGTGGGGGCCTCGGGGAAAGGAGCCCTTGTGTGTGT
GACGGCGGCCTTCTGTGTGACCACGGTTCAGTGCTCTGGCCAAGATGCCC
TCGTGGCAAGGAGCCCATCGAGCACTGGAAATAAATGTGAAGAAGAAACT
GAGTAAAATAAAAAACGAACTCAACACGCCAAATTGTTCAAAATATCGCT
CGAATTTTCTCCGTCTCTCGACAGCCTTACACGCAGTGGTATCCCGCCTG
GGGAGACCGGCAAGTCTTTACCCTTCGAGGGGATCGGCAGATGGAACTCG
GTTCGCAGAACTCCTCCACAAACTATTAGGACACAGTATTGACCTCTCGG
GCGTGGTGGTCTGCGGTGATGCCCTGGAGTGCCGATGGTGCATCCGGGTG
TTTTCGAAGAACCATCCTGATCCGAAAAAACGCCTGCATCTCTCTGCGGG
TATATCCACATCAAGCGAGTTTTTATCCCTCGAGCACCACACCTCCTCAT
TTCGGCTACTCTCTTCAGCGCTACCGATTTTATCTAGGCTTCAGCTACTA
GAAACGTGCGTTCACAAGCCCACAAGCTGGTGTACAGCTGTCGCTGCACA
CCAAAAGGTCGACAAATTATTTGGAATGTACATTTGTATGTAGCTTTATG
CCTAACCCTGACCCTTTAGCGTTTGCTTGGCTCGGAATGTACATATGTAT
GTAGCTTCATATTTTTGCATCCGTGTTATCACACTAGTTTGGTTATTCAG
CCAAAATAGCTCTATCTGTCGGCCCCCCAGCGGAACAACACTGCGCACGC
TATTTCTTTGTTCTCTTCGCAAAAAAAAAAAAAACGCGCCATAGGTATGT
AGATTTTTGTCGAAATATGTTATCATCTCCTATACTATCTAGACTCCATA
TTTCGACAAAAATCGTGATGCTGCATTGTGGATACCTCTTACTCCAGTAG
TCTTTTTTTTTTGTGTGTGTGCTTCATATCCCCGTACTGACTGTGTATAA
ACTCTTCCTGTTGTTTCTGCCCTGTCCCTCGATCATTTCTGCCCCACCCA
CCCACACTCCCATCCTCCTCAACGGCAGAGCATGGAAGGATTCATAGCGG
GCCCCAACCAAGCCTTCCGGCGCGCCCTTCTGCCCCTCGACTGCTGCAGC
GGAGGAAACAGCCGCGGC back to topCoding sequence (CDS) from alignment at L-elsbetiae_contig117:36676..41543+ >mRNA_L-elsbetiae_contig117.1477.1 ID=mRNA_L-elsbetiae_contig117.1477.1|Name=mRNA_L-elsbetiae_contig117.1477.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=816bp|location=Sequence derived from alignment at L-elsbetiae_contig117:36676..41543+ (Laminarionema elsbetiae ELsaHSoW15)
ATGAAGCGTGGTACTCGCGAGCCCTTCGCCAGGGCCGGCTCCCCGAATTC
TCCGGTGCCGTCTCCTTCATCAGCAGGCAAGCGGAGACGGCTGCTCAACA
GCGACGACGGGCCGTCAAGCCAAGAGCCGCCTTACGGGCCGTTCCAAGCC
CTCCTCGCCGAACACGGAGTGGCATGGCCCTCTGCGGAGGCGATGGCGGA
CGAGGACAGCGAGAAGAGGTCGCTGGGGTTCTCCTGCCGCAGCAACCCCT
CGAAGCTAAGGGTTGGGGTCGAGAGGGCGCTGGTGCACGATGGAGCTCGT
CGAAGTGAATTCGTAGAGATGAAGCGTGGTACTCGCGAGCCCTTCGCCAG
GGCCGGCTCCCCGAATTCTCCGGTGCCGTCTCCTTCATCAGCAGGCAAGC
GGAGACGGCTGCTCAACAGCGACGACGGGCCGTCAAGCCAAGAGCCGCCT
TACGGGCCGTTCCAAGCCCTCCTCGCCGAACACGGAGTGGCATGGCCCTC
TGCGGAGGCGATGGCGGACGAGGACAGCGAGAAGAGGTCGCTGGGGTTCT
CCTGCCGCAGCAACCCCTCGAAGCTAAGGGTTGGGGTCGAGAGGGCGCTG
GTGCACGATGGAGCTCGTCGAAGTGAATTCGTAGAGAGCATGGAAGGATT
CATAGCGGGCCCCAACCAAGCCTTCCGGCGCGCCCTTCTGCCCCTCGACT
GCTGCAGCGGAGGAAACAGCCGCGGCAGCATGGAAGGATTCATAGCGGGC
CCCAACCAAGCCTTCCGGCGCGCCCTTCTGCCCCTCGACTGCTGCAGCGG
AGGAAACAGCCGCGGC back to top
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