mRNA_L-elsbetiae_contig11435.1252.1 (mRNA) Laminarionema elsbetiae ELsaHSoW15

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-elsbetiae_contig11435.1252.1
Unique NamemRNA_L-elsbetiae_contig11435.1252.1
TypemRNA
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Homology
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: A0A6H5L1C5_9PHAE (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1C5_9PHAE)

HSP 1 Score: 512 bits (1318), Expect = 5.690e-176
Identity = 266/313 (84.98%), Postives = 283/313 (90.42%), Query Frame = 1 
Query:    1 RAFMSSAPDAEQQERSSAPLDPTPEPAAQPQTSGGGDLTPPPGSSEQAEAEIMGPSTSTVFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANGGSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLAKLTSTGIGKRIAG---SGLPLADVAWTQPLSTKEVARSAVKCCLEGTDSLGGGRGKDSGDAVVLKVQDIASMAA 930
            R FMSS+PDAE++   S P+    EPA QPQ SGGGDLTPPPG SEQ EAE++GPS STVFVAGGSGFVGSEIC+QLV AGCNVIALSRKGAPANGGSW KSVKWVEGNALNQDLYRAELR+SDTVVSCVGGFGKTDAYMGLVNGE NIKLAEAAADAG KQFVFVSVHDYKAPSVVKKVGYFDGKRR EK++GELFG KG ILKPA IYGSRD+KL GPKGKERT+N+PLQRVGGPLAK+TSTGIGKRIA    SGLPLADVAWTQPLST EVA+SAV+CCLEGTDSLGGGRGKDSGDAVVLKVQD+A M A
Sbjct:   54 RVFMSSSPDAEEE---SVPV--AQEPAPQPQASGGGDLTPPPGISEQEEAELVGPSKSTVFVAGGSGFVGSEICTQLVAAGCNVIALSRKGAPANGGSWVKSVKWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSVVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIASESRSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSLGGGRGKDSGDAVVLKVQDMAQMTA 361
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: D7FJU6_ECTSI (NAD(P)-bd_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJU6_ECTSI)

HSP 1 Score: 431 bits (1109), Expect = 3.060e-145
Identity = 212/241 (87.97%), Postives = 225/241 (93.36%), Query Frame = 1 
Query:  208 GSEICSQLVDAGCNVIALSRKGAPANGGSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLAKLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAVKCCLEGTDSLGGGRGKDSGDAVVLKVQDIASMAA 930
            G  + ++LV AGCNVIALSRKGAPANGGSW KSVKWVEGNALNQDLYRAELR+SDTVVSCVGGFGKTDAYMGLVNGE NIKLAEAAADAG KQFVFVSVHDYKAPS VKKVGYFDGKRR EK++GELFG KG ILKPA IYGSRD+KL GPKGKERT+N+PLQRVGGPLAK+TSTGIGKRIAGSGLPLADVAWTQPLST EVA+SAV+CCLEGTDSLGGGRGKDSGDAVVLKVQD+A M A
Sbjct:   64 GDAVNTKLVAAGCNVIALSRKGAPANGGSWVKSVKWVEGNALNQDLYRAELRRSDTVVSCVGGFGKTDAYMGLVNGETNIKLAEAAADAGVKQFVFVSVHDYKAPSAVKKVGYFDGKRRAEKLIGELFGAKGVILKPAFIYGSRDVKLTGPKGKERTVNIPLQRVGGPLAKITSTGIGKRIAGSGLPLADVAWTQPLSTAEVAKSAVRCCLEGTDSLGGGRGKDSGDAVVLKVQDMAQMTA 304
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: A0A835ZDA8_9STRA (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDA8_9STRA)

HSP 1 Score: 228 bits (580), Expect = 4.930e-66
Identity = 128/277 (46.21%), Postives = 172/277 (62.09%), Query Frame = 1 
Query:  109 DLTPPPGSSEQAEAEIMGPSTSTVFVAGGSGFVGSEICSQLVDAGCNVIALSRKGA--PANGGSWTKSVK-WVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKER-TINVPLQRVGGPLAKLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAVKCCLEGTDSLGGG-RGKDSGDAVVLKVQDIASM 924
            D++P   S E+       P T  VFVAG +GFVGS++C +L+  G  V+ LSR G   P     W   V+ W+  +AL+ D Y++ L   D+VVSC+GGFG TD+Y+ LVNG+  IKL EAA +AG  +FVFVSVH+YK P+ V + GYF GKRR E  +GEL+G  G +L+PA IYG + +    P   E+ T+ +PL+++G P AK+T+    KR+A SGLPLAD  +TQPLS  EVA +A +C   GT + G   R      A VL V DI  M
Sbjct:   36 DVSPVQMSDERPIVTEPAPFTGKVFVAGATGFVGSKVCQELIKQGAKVVGLSRSGKRKPTEAEWWEDDVEAWIAASALDVDSYKSALEGCDSVVSCIGGFGATDSYLNLVNGDCTIKLCEAAKEAGVPRFVFVSVHEYKLPTAVARTGYFAGKRRAEARIGELYGADGYVLRPAFIYGQKKVTFTNPFSYEKKTVTLPLEKIGEPAAKITAMNPIKRLANSGLPLADTVYTQPLSVDEVAFAASRCAA-GTATAGVTVRLPSETGANVLTVDDIKRM 311
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: A0A7S2ZC37_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZC37_9RHOD)

HSP 1 Score: 152 bits (383), Expect = 1.330e-38
Identity = 89/224 (39.73%), Postives = 128/224 (57.14%), Query Frame = 1 
Query:  172 STVFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANGGSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYK-APSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLAKLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAVKCCL 840
            S V V GG+GFVG+ IC++ ++ G  V A+SR G P     W   V+W++ +AL  D Y   L    ++VSC+G FG    Y   +NG ANI+ A+AA D G ++FVF+S   Y+   SV    GYF GKR  E+ + +LF  +  IL+P ++YG R        GK +   +PLQ +G PLA LTS    K +A    P+  +A TQPL  + VAR+A++  +
Sbjct:   11 SKVLVLGGNGFVGNAICTEALNRGFEVAAMSRSGRPEREDGWMSDVEWIKADALEPDSYIKYLSPIQSIVSCIGAFGSYK-YAYEINGTANIRAAKAANDNGVERFVFISAKQYEYIESVPPMNGYFQGKRAAEEEIQKLFPSRSTILRPGMVYGERYT------GKTK---IPLQLIGQPLAALTSLNPIKSLAK--YPIFQLALTQPLPVETVARNALRAAI 222
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: A0A7S4LN96_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LN96_9EUGL)

HSP 1 Score: 144 bits (363), Expect = 2.270e-35
Identity = 92/225 (40.89%), Postives = 130/225 (57.78%), Query Frame = 1 
Query:  178 VFVAGGSGFVGSEICSQLVDAGCNVIALSRKG---APANGGS-WTKSVKWVEGNALNQDLYRAELRQSDT-VVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYK--APSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLAKLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAVK 831
            + V GG+G+VGS IC   V+ G  V ALSR G   +PA     W K V W++G+ +++D +RA L    T V+S VG FG ++A+M  V G+ NI   E AA A   +FVFVS HDY+     V    GYF+GKRR E+ V EL+   G +L+P+ +YG+R            T+ +PL  VG PL  L +    K +A   LP+ D+ +T P+S + VAR+A+K
Sbjct:   42 ILVVGGNGYVGSTICRIGVERGLQVAALSRGGRLYSPAQADQPWAKEVTWLKGDVMDRDAWRAHLCSDTTAVISSVGAFG-SNAFMEQVCGDTNIAACEEAAAAHVPRFVFVSAHDYRLIGHGVGPLKGYFNGKRRVERRVRELYPSGGHVLQPSFVYGTRH---------HGTMKIPLGLVGAPLEALCALAPVKALAR--LPILDLPFTSPVSVEAVARTAIK 254
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: A0A388KKI2_CHABU (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KKI2_CHABU)

HSP 1 Score: 148 bits (374), Expect = 4.890e-35
Identity = 80/222 (36.04%), Postives = 125/222 (56.31%), Query Frame = 1 
Query:  178 VFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANGGSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLAKLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAVKCCLE 843
            + V GG+GFVGS IC + +  G +V +++R G PA    W K V+WV G+  + D++R +LR +  VVSC+GGFG  D  M  +NG AN+K  +AAA+   K+FV +S H +  P+++ + GY++GKR  E+ V   F   G IL+P  I+G+R++           + VPL  +GGPL  +  +        S LP+       P+    VA++AV+   +
Sbjct:  252 LVVFGGNGFVGSHICREALSRGIHVTSVNRSGPPARQEPWLKEVEWVRGDVFDPDVWRMQLRDASGVVSCIGGFGTND-EMRRINGHANVKAVQAAAEEDVKRFVLISAHYFSVPAIILR-GYYEGKRIAEEAVRSKFPYGGIILRPGFIHGNRNVG---------NLTVPLSVIGGPLEAVMRSRAFTWT--SNLPIVGSVLLPPVKATAVAKAAVRAATD 460
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: UPI0005399BD3 (uncharacterized protein At1g32220, chloroplastic isoform X1 n=5 Tax=Camelina sativa TaxID=90675 RepID=UPI0005399BD3)

HSP 1 Score: 139 bits (351), Expect = 9.480e-34
Identity = 84/229 (36.68%), Postives = 128/229 (55.90%), Query Frame = 1 
Query:  166 STSTVFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANGGSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLA---KLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAVKCCLE 843
            S+  + V GG+G+VGS IC + +  G +V +LSR G  +  GSW   V W +G+ L+ D  +  L    +V+SCVGGFG +++ M  +NG ANI    AAA+ G K+FV++S  D+   + + + GYF+GKR TE  + + FG +G IL+P  I+G+R +          +I +PL  +G PL    KL    + K      LPL       P++ K VA +AVK  ++
Sbjct:   40 SSDKILVLGGNGYVGSHICKEALRQGFSVSSLSRSGRSSMHGSWVDDVTWHKGDLLSPDSLKPALEGITSVISCVGGFG-SNSQMVRINGTANINAVNAAAEQGVKRFVYISAADFGVINNLIR-GYFEGKRATEAEILDKFGNRGTILRPGFIHGTRQVG---------SIKLPLSLIGAPLEMVLKLFPKEVTK------LPLIGPLLIPPVNVKSVAGTAVKAAVD 251
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: A0A5J4YUC1_PORPP (NAD(P)-bd_dom domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUC1_PORPP)

HSP 1 Score: 137 bits (346), Expect = 1.600e-32
Identity = 87/239 (36.40%), Postives = 134/239 (56.07%), Query Frame = 1 
Query:  130 SSEQAEAEIMG----PSTSTVFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANG--GSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLAKLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAV 828
            SS +A+A+       P   T+ V GG+G+VGS I       G +V+ +SR GA +     +    V W+ G+AL  + ++  L  +  VVSCVGGFG  +  M  + G+ N+ +A AA +AG  +FVFVS   Y       + GYF+GK+  E+V GELFG+   IL+PA +YG+R I +  PK    ++NVPLQ +G PL     T   + ++  G P  ++A++ P S  ++++ AV
Sbjct:   46 SSGEAQAQEQSGNESPERKTLVVVGGAGYVGSHIARYAKRCGLSVLCISRSGASSAQLKDASLDGVAWLRGDALEPESWKYALSGASGVVSCVGGFGSNE-QMRRICGDTNVSVARAAHEAGVPRFVFVSARMYAFQPAFMR-GYFEGKKMAEQVAGELFGKDATILRPAFVYGARQISI--PKVNV-SLNVPLQLIGKPLHAFNQTQAARAVSKLGGPF-ELAFSPPTSVDDLSKCAV 278
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: Q949S7_ARATH (NAD(P)-binding Rossmann-fold superfamily protein n=13 Tax=Brassicaceae TaxID=3700 RepID=Q949S7_ARATH)

HSP 1 Score: 135 bits (340), Expect = 3.130e-32
Identity = 79/225 (35.11%), Postives = 127/225 (56.44%), Query Frame = 1 
Query:  178 VFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANGGSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLA---KLTSTGIGKRIAGSGLPLADVAWTQPLSTKEVARSAVKCCLE 843
            + V GG+G+VGS IC + +  G +V +LSR G  +   SW   V W +G+ L+ D  +  L    +V+SCVGGFG +++ M  +NG ANI   +AAA+ G K+FV++S  D+   + + + GYF+GKR TE  + + FG +G++L+P  I+G+R +          +I +PL  +G PL    KL    + K      +P+       P++ K VA +AVK  ++
Sbjct:   44 ILVLGGNGYVGSHICKEALRQGFSVSSLSRSGRSSLHDSWVDDVTWHQGDLLSPDSLKPALEGITSVISCVGGFG-SNSQMVRINGTANINAVKAAAEQGVKRFVYISAADFGVINNLIR-GYFEGKRATEAEILDKFGNRGSVLRPGFIHGTRQVG---------SIKLPLSLIGAPLEMVLKLLPKEVTK------IPVIGPLLIPPVNVKSVAATAVKAAVD 251
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BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Match: D8T5V7_SELML (NAD(P)-bd_dom domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8T5V7_SELML)

HSP 1 Score: 135 bits (340), Expect = 4.750e-32
Identity = 76/199 (38.19%), Postives = 109/199 (54.77%), Query Frame = 1 
Query:  118 PPPGSSEQAEAEIMGPSTSTVFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANGGSWTKSVKWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAEAAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAILKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPL 714
            PPP  +E+AE   + P  S + V GG+GFVGS +C + V     V +L+R G P     W   V+W+ GN +  +     ++    V+SCVGGFG  D  M  +NG+AN+K   AAAD+G K+FV+VS  D    S + + GYF+GK+  E  V   F   G IL+P  I+G+R +          +I +PL  +G PL
Sbjct:   40 PPPHPTEEAETVDVQPERSKILVLGGNGFVGSHVCREAVVRDIPVASLNRSGKPHIDEPWVNKVEWIRGNLIGPNTIGEHMKDVSAVISCVGGFGSNDT-MRKINGDANVKAINAAADSGVKRFVYVSASDLGFASYILR-GYFEGKKAAENAVMSRFPYGGVILRPGFIHGTRRVG---------SIQLPLGVIGTPL 227
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig11435.1252.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L1C5_9PHAE5.690e-17684.98NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
D7FJU6_ECTSI3.060e-14587.97NAD(P)-bd_dom domain-containing protein n=1 Tax=Ec... [more]
A0A835ZDA8_9STRA4.930e-6646.21NAD(P)-bd_dom domain-containing protein (Fragment)... [more]
A0A7S2ZC37_9RHOD1.330e-3839.73Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S4LN96_9EUGL2.270e-3540.89Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A388KKI2_CHABU4.890e-3536.04NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
UPI0005399BD39.480e-3436.68uncharacterized protein At1g32220, chloroplastic i... [more]
A0A5J4YUC1_PORPP1.600e-3236.40NAD(P)-bd_dom domain-containing protein n=1 Tax=Po... [more]
Q949S7_ARATH3.130e-3235.11NAD(P)-binding Rossmann-fold superfamily protein n... [more]
D8T5V7_SELML4.750e-3238.19NAD(P)-bd_dom domain-containing protein n=2 Tax=Se... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig11435contigL-elsbetiae_contig11435:546..6244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score431.4
Seed ortholog evalue3.5e-118
Seed eggNOG ortholog2880.D7FJU6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ubiquinone-6 biosynthetic process
EggNOG OGsCOG0702@1,KOG4288@2759
COG Functional cat.GM
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Ec32 ortholog descriptionNAD(P)-binding domain
Ec32 orthologEc-10_000520.1
Exons6
Model size1840
Cds size924
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig11435.1252.1prot_L-elsbetiae_contig11435.1252.1Laminarionema elsbetiae ELsaHSoW15polypeptideL-elsbetiae_contig11435 555..5337 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815350.3899753-UTR-L-elsbetiae_contig11435:545..5541622815350.3899753-UTR-L-elsbetiae_contig11435:545..554Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11435 546..554 +
1691682854.8832946-UTR-L-elsbetiae_contig11435:545..5541691682854.8832946-UTR-L-elsbetiae_contig11435:545..554Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11435 546..554 +
1622815350.5005896-UTR-L-elsbetiae_contig11435:5337..62441622815350.5005896-UTR-L-elsbetiae_contig11435:5337..6244Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11435 5338..6244 +
1691682854.9807289-UTR-L-elsbetiae_contig11435:5337..62441691682854.9807289-UTR-L-elsbetiae_contig11435:5337..6244Laminarionema elsbetiae ELsaHSoW15UTRL-elsbetiae_contig11435 5338..6244 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815350.4367049-CDS-L-elsbetiae_contig11435:554..7731622815350.4367049-CDS-L-elsbetiae_contig11435:554..773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 555..773 +
1691682854.894346-CDS-L-elsbetiae_contig11435:554..7731691682854.894346-CDS-L-elsbetiae_contig11435:554..773Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 555..773 +
1622815350.4492357-CDS-L-elsbetiae_contig11435:1357..14621622815350.4492357-CDS-L-elsbetiae_contig11435:1357..1462Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 1358..1462 +
1691682854.9093907-CDS-L-elsbetiae_contig11435:1357..14621691682854.9093907-CDS-L-elsbetiae_contig11435:1357..1462Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 1358..1462 +
1622815350.4615552-CDS-L-elsbetiae_contig11435:2891..30171622815350.4615552-CDS-L-elsbetiae_contig11435:2891..3017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 2892..3017 +
1691682854.934097-CDS-L-elsbetiae_contig11435:2891..30171691682854.934097-CDS-L-elsbetiae_contig11435:2891..3017Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 2892..3017 +
1622815350.4708188-CDS-L-elsbetiae_contig11435:3926..40671622815350.4708188-CDS-L-elsbetiae_contig11435:3926..4067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 3927..4067 +
1691682854.9461367-CDS-L-elsbetiae_contig11435:3926..40671691682854.9461367-CDS-L-elsbetiae_contig11435:3926..4067Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 3927..4067 +
1622815350.4808476-CDS-L-elsbetiae_contig11435:4431..45851622815350.4808476-CDS-L-elsbetiae_contig11435:4431..4585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 4432..4585 +
1691682854.9573233-CDS-L-elsbetiae_contig11435:4431..45851691682854.9573233-CDS-L-elsbetiae_contig11435:4431..4585Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 4432..4585 +
1622815350.4900339-CDS-L-elsbetiae_contig11435:5158..53371622815350.4900339-CDS-L-elsbetiae_contig11435:5158..5337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 5159..5337 +
1691682854.9698327-CDS-L-elsbetiae_contig11435:5158..53371691682854.9698327-CDS-L-elsbetiae_contig11435:5158..5337Laminarionema elsbetiae ELsaHSoW15CDSL-elsbetiae_contig11435 5159..5337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-elsbetiae_contig11435.1252.1

>prot_L-elsbetiae_contig11435.1252.1 ID=prot_L-elsbetiae_contig11435.1252.1|Name=mRNA_L-elsbetiae_contig11435.1252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=308bp
MSSAPDAEQQERSSAPLDPTPEPAAQPQTSGGGDLTPPPGSSEQAEAEIM
GPSTSTVFVAGGSGFVGSEICSQLVDAGCNVIALSRKGAPANGGSWTKSV
KWVEGNALNQDLYRAELRQSDTVVSCVGGFGKTDAYMGLVNGEANIKLAE
AAADAGCKQFVFVSVHDYKAPSVVKKVGYFDGKRRTEKVVGELFGEKGAI
LKPALIYGSRDIKLNGPKGKERTINVPLQRVGGPLAKLTSTGIGKRIAGS
GLPLADVAWTQPLSTKEVARSAVKCCLEGTDSLGGGRGKDSGDAVVLKVQ
DIASMAA*
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mRNA from alignment at L-elsbetiae_contig11435:546..6244+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-elsbetiae_contig11435.1252.1 ID=mRNA_L-elsbetiae_contig11435.1252.1|Name=mRNA_L-elsbetiae_contig11435.1252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=mRNA|length=5699bp|location=Sequence derived from alignment at L-elsbetiae_contig11435:546..6244+ (Laminarionema elsbetiae ELsaHSoW15)
AGGGCTTTCATGTCGTCCGCACCAGACGCTGAGCAGCAGGAGAGAAGCAG
CGCCCCTCTCGACCCGACACCAGAGCCCGCGGCGCAGCCCCAGACGTCGG
GGGGTGGAGACCTCACGCCGCCCCCCGGATCTTCCGAGCAAGCGGAAGCG
GAGATCATGGGTCCTTCCACGTCCACCGTGTTCGTGGCCGGCGGGTCCGG
CTTCGTCGGGTCGGAGATCTGCAGCCAGGTATCATCTAACACGCTCCGTA
GATGTGTGTTCCGTAGAAAGGGGGCCATTTAGGGCTCGATTTGGGGGATC
GGTTTGCGCGGGGGGGGGGGGGTAGAGTAGGCCACGACGTCCCCACCGTT
TTTCATTTAGTTGGCGATAGAGAAACGCGAGGCTGATTCTTGGGCGCCGT
GTGGGCGTTTCTACATGTTAACCTGTTTTTTTGTTTTTTTCGACCAAATG
TACATAAGATGTGTACGTCGCGAAACCGGTTGGCCGCCCAACCCTTGGGA
GGTCGAGCGGTCTGAAGGTACTTCCTTGCGTAGGCGCTCTTGGTTTGCTC
TCAGTGGGTGGTGCGTGAGCTTCTTCGTGTGAGCAGGATATGGTGTATGT
ATTTTTGCGGCGAAAAATTTCCGTTTTTTTGTATTTTTCTCGCAGCTGAC
CCTGTTTTGTTTTGTGCTGCTCTACAAACCCTTTTCGTTTTCTCTCCGTT
TATCTTTTGTCGGTGGCGTCTGTCGTGCTTCGCGCTGGTGCTCGTTGTTG
TTATCGATGTTGTTAATGTTGTTGTTGTTGTTGTTGGGGGTGACGTGACT
GCTGGGGCGCAGCTTGTTGACGCCGGCTGCAACGTGATCGCCCTCAGCCG
AAAGGGGGCACCGGCGAATGGAGGATCGTGGACCAAGTCCGTCAAGTGGG
TCGAGGGCAACGCGCTGGTGAGAGAGCCAAGACAAGGCCAAGGGCGCGCG
CGTATTTTGGACGGGCATTTAATGCGATAGGGAGAGCATTGTTTGTGCTT
TTGTGCAACACAACTCAAAGCAGCGCAGAGATGAAGCGCGCCCGGGGATC
TAGGTTCGAGGCGAAAACTGTTCCCTTTTGTCTGCATTTTGTTTTAGTAA
GTATTTTAATAGCTTCTCAAATGCTTGCTGACGGGGCGTTCGTCGTATTC
ATGATGTCGCTTGTCGCGGTGTGTGTGTGTCCTTCCCATTTATTTTGGCG
ACAGTCCCCCCAAGTGGAGACGTGTACTACACCTTGCGGTGTACCTAGAG
GTACTACACTTTGCAGTGCCTTTGTCTGTGCAACTAGAACCAACCGGGGT
CACACAGGAGGGGGTGAACACTGGGGCTTTTTCTTCTTTTTACATTATTT
GTTTGCCCCACCTTCCTCCTGCGGTGCTTGCCTTCATTTTTATCGCGAGA
AGGGTTCAGCTGTCCCTTTCCCTCGTCAACGTGCTTACGTCGAAGTTTGG
TGCTCACGAGCTTTTCAGCTTCAATCGCTTTCACCTGCAAAGTCACAAAA
GAAACACTTCGTATTATTTAGGCATCTGCTGCAAAATTAAAACCCGCTGG
TAAAGAGTGCTTTTGTTTTTGGCTCGCCCTTGCCCCCTCACGGGTGTTGG
CATGTGCATATGTGTTGATTTCAGTGACGCCAACAACAAGGTTCACTGCG
CCCTACATACCTGCGTGATATACGAAACCCCCAAATTATCCACGTAACCC
CCAAAGATCCCATCGACCGTATCTTGTGCCTAGTCCACCTAACAAAAGGC
CTGTCCCAGCGTGCCAAGGCGGTCATGTCCGGATGATGCAGCAGAACGTA
ACAGCCTTCTCTGCTGCTGTATGTAACAGTAGTTACACGGCCACCTCTGT
CGCATGTGCTGGTCTGCTGCACCAGGCGCAAGAGCCGTCCGATGCGGGAC
CTCGTTACGCAACAATCCCCAAACGCCCGCCTACCCTGCTCCCTCCCCCC
GAGCACCATCATCTGAATAGTTGGTCCCTGATTTTGGCTCGCGCCACGCC
GTGTTTACTCGCGCACCCGAACTCACCGAGGCCTGTAACGATATCAACAT
GTGTTGTTTCTATTACCCCGGATTTTTTTTTTTTTTTTTTTTTTTTTTCT
TTTTTTTTCAGTTCTAAATGGGCTCCTTGCCACGAAGGCATCTTGCCAAA
GCACTGAACCGTGGTCACACAGAAGGGTTCCTTTTTCCCGAGGCCCCCCA
CTCCCCCCTTCTGCGGTGCTTGCCTACACACATTGGTTATTCGAGCTGGG
TTGAGTTTATTCTCCTGCCGAACTCGCTGAATTACCCCGTGCTTTTTTCC
TTGTTTTCTGTTTGGCGCCGGCCCCGCCGTTTGATTTTTGTGCCAGAACC
AAGATCTGTACAGGGCCGAGCTGCGGCAGTCGGACACGGTCGTGTCCTGC
GTTGGGGGGTTCGGGAAGACCGACGCTTACATGGGCTTGGTTAACGGCGA
AGCGAACATCAAGCTCGCGGAGGTGTGTTTGCATGCATGCGTGTATGTGT
GCGTGTGCGTGTGTGTGTCTGGCGTGCGTTTCTTTGGTTCCATAGTGTAG
ATGGTACTCGCTGCTGGATGGTAAACCCAAGGCATCGGTCGTGTAAGGCT
AGTTAGTTATGTTGTGTTTGTTGTTTGGTTGCTTGTTTGTATTCTCGACC
TGCGTCGTGTCCTGTCCGAGGTTATTTTATTTTATTTTTATTTTATTTTA
TTTTTTTGTATCCCCTGTTGGTGGGCGGTATAATCGGGGGGAGGACTATG
TAGACCTGTGCGGGCCTGGCCGGCGAGAGCCCGTCGCGGAACCCCCCGGC
TTTGTTGGTACCAAGATAGTGGTGTTGGCTGTTCCAGTTTTGTTTTTACC
TCACATAGCGTGTAGAGGGGAGCGGAGGGCTCCAGATTCGAATTATCTGT
TTTATTATTGCTTTGCTGGCCCTTCGGGTCCATTTTATTTTTCGTGTACC
TTTTGTTGGGTATTAGTGAGCCTGTGACCACGGGAATTGACCGCATCAAG
TGCTAGATTAGTACGGACATTGAGAGGTACTGGATGGAGAGACCGGAGCG
GTCTTTAATGCGAAGACAACATACATGCATATTGTGCAAGACCGGGCTGT
TTCGAAGCACTGGTGCCTGCCGGACTCCTCGTTCGTCGCGTCGAGTCGTA
GTTCTGCCTCGTATTTTTTGTTTTCTATCGGCTCGCGTGACATTCCCAGT
CAACAGCAGAAATCAACGCCGGGGGAGAGACATTAGCATCTTCGGAGAAT
CCGGTGAGACCGGTCGCATCACGAAATGGTACCAGCATCCGGCCCCCCTC
CTGACCCCCAGTTGAAACCGGTCGAAGCTGCACCCCCCCCCCCACATGAC
ACCTCCTTGGTTGATCTGTCTCTTGATTCAGGCCGCCGCAGATGCAGGGT
GCAAGCAGTTCGTGTTTGTGTCCGTGCACGACTACAAGGCGCCGTCGGTG
GTGAAGAAAGTGGGCTATTTTGATGGAAAGCGGCGGACGGAGAAGGTCGT
CGGGGAGCTGTTCGGCGAAAAGGCGAGAGAAACGGAGGAGGGATGGAGAA
AGAGAGAGAGAGGGGGGGTGGGGTGTGGGGGGCATCCTTAACGACCCTAA
AAAATTCTAGTTTTTTTTGTCGTTCCCTTTTTTTGTGCCGTCTTTCCTGC
TGCTGTCGTGTTGTAAACACTCGCCGTACGAGCACGGCCGCCGATGGTGT
CGTGCAGGTGGCAACCCTTCAAGGCACCAACCGCTATGTTTTCTTCGAAA
CTTGATTTGTAAATGGGTCGGTCAGTACAATACAACCCACCCTGGGAAAA
TCGTGGTTAAATTTGACCAACGAACCTTCTTCTTGTATGCGGCGGCACGC
CGATGCCCGCGCCGTCGCCTCGCCCAACCCGCACAGGGAGCTATCCTGAA
GCCCGCGTTGATCTACGGCTCTCGCGACATCAAGCTGAACGGCCCCAAGG
GAAAGGAGCGGACGATCAACGTGCCGCTGCAGCGCGTGGGGGGCCCGCTG
GCAAAGTTGACCTCCACGGGCATCGGCAAGAGAATCGCAGGTGGGTCGGG
GTGCCTCTTCTCTCTCTCTCCCTCTCTCTCTATTTCTCTCTCTCTCTCTC
TCTCTGTCTGTCTGTCTGTCTGTTTGTGCCTGTGTATTTGTCCACTAGGA
TCGACCACGCTGAATGACGTCAGATCTGTGGGCGAATGTATTTCGGACGC
ACGCCCAGCTTACGTCGGTTGCTGTCTAATTATAACTCTTTGAATTTTGT
TTTTTAAGATATGTTTTTTGGATTTCCGAACTGCTGTACCTGAGCTCGAT
ACCTTTGTCAATCCCTCCTTCTGGTTCGCATACATACCAGGACATGGTGA
TTGAGTGTACAGCTTGTCCCAGTCGACTAGAATACCCCCCCCCCCCTTCT
ATTGGGTGATTCCGGCTGAACGACCCCCGTCTCCCAAAGAGGCTGAAAAC
AGGAGCTTGGAGGTTGTAGATGTGTGCACACGAGCGTACACATGTAGATG
CGAGGGCAGTTGGGGATGAACAAGTTCGTTGCCCAAAGTAGCGAATACTG
TTCACGACCGCACGACCCACCTAACGCTCCCCACCCTACGCGCCTTGCGG
GGGACACACACAGGGTCTGGGCTTCCGCTCGCAGACGTGGCGTGGACTCA
GCCGCTCAGCACCAAAGAGGTGGCAAGATCGGCGGTGAAGTGCTGCCTAG
AGGGCACCGACTCTCTGGGCGGGGGCAGGGGCAAGGACTCCGGGGATGCC
GTCGTGCTCAAGGTCCAAGACATTGCCTCGATGGCGGCGTGACGCGACGT
GGCCGGATCGGACGGCTGCATGTGTGTCCTATAGCTGTTGGAGGCGTGGC
GTGAGAGATCGCGACCGGCCGCTTTCGTGGAGAGGTTGGATGTGTTGGTT
GTGGCTTCCCGACCCACCGGCATGGTCTTCAAGCGGGGTCGTCTTTCGTT
GGGTTTGAGCCCGGCGTCATGGCTCAGTCGCCCGCGTGCCGCCGTTACGT
GGCTCTTGCCGTCTCGTGCGTTTTGCTTGGCCTCTGGGAAAAAAGGGGTT
CGTGTTTTTCAGCTTCACCGAGGGGCCCTGAGAGCGTGTAGTACCAACTC
TTCCATCGCGTGTCGTTCGGAAACCAATGCCGTCGCCGCGAACTTTCCAG
GAACAACTGCTGTGTCTGTGGTTGGGGTTAATTGAGATCGTTGGGGTTTA
AAACAAAATGCAAGAGGAGCTGGTGTATCTATGGTGGGGAGATCTTGCTG
AACAGGACCTCACGCAGAGCCTGTATTTGAGCGTCAAACTGTAAAAAGAA
GAGTGGTCGGAGTAACAGAGGCCGGCGTGGGTTGCCCGGTCGGGGGGGAA
GGAATGCGATGGAGTTTATTTATTTTGTTGCGCATTCTTGTCTTTGTTTT
TCAGAGTGCATCGAGTTGGTCGGTGTGTAACTTACAGATGGTGGGAGTTA
ATACTACTACATGTGAACACCGATATATATATACTTCCTCTGTCTCATAA
GTCTGGGAACTTATGCTGGGAGAGACCGTTAACGGTCTCGGAAGTCTTCG
GCGATAACTTTTTCGAAATCTTGAGCGTTTTTTGGGTTGGTACACATTTT
TTTTTTTCTGATTGCGCACTACCTTGCATGGGCTAGCGGGTAACAAAAAA
GTAGTCAGGCCGAAAATAGCCGTATTTGACCCCTTTCCAGAGGGGGGGG
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Coding sequence (CDS) from alignment at L-elsbetiae_contig11435:546..6244+

>mRNA_L-elsbetiae_contig11435.1252.1 ID=mRNA_L-elsbetiae_contig11435.1252.1|Name=mRNA_L-elsbetiae_contig11435.1252.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=CDS|length=1848bp|location=Sequence derived from alignment at L-elsbetiae_contig11435:546..6244+ (Laminarionema elsbetiae ELsaHSoW15)
ATGTCGTCCGCACCAGACGCTGAGCAGCAGGAGAGAAGCAGCGCCCCTCT
CGACCCGACACCAGAGCCCGCGGCGCAGCCCCAGACGTCGGGGGGTGGAG
ACCTCACGCCGCCCCCCGGATCTTCCGAGCAAGCGGAAGCGGAGATCATG
GGTCCTTCCACGTCCACCGTGTTCGTGGCCGGCGGGTCCGGCTTCGTCGG
GTCGGAGATCTGCAGCCAGATGTCGTCCGCACCAGACGCTGAGCAGCAGG
AGAGAAGCAGCGCCCCTCTCGACCCGACACCAGAGCCCGCGGCGCAGCCC
CAGACGTCGGGGGGTGGAGACCTCACGCCGCCCCCCGGATCTTCCGAGCA
AGCGGAAGCGGAGATCATGGGTCCTTCCACGTCCACCGTGTTCGTGGCCG
GCGGGTCCGGCTTCGTCGGGTCGGAGATCTGCAGCCAGCTTGTTGACGCC
GGCTGCAACGTGATCGCCCTCAGCCGAAAGGGGGCACCGGCGAATGGAGG
ATCGTGGACCAAGTCCGTCAAGTGGGTCGAGGGCAACGCGCTGCTTGTTG
ACGCCGGCTGCAACGTGATCGCCCTCAGCCGAAAGGGGGCACCGGCGAAT
GGAGGATCGTGGACCAAGTCCGTCAAGTGGGTCGAGGGCAACGCGCTGAA
CCAAGATCTGTACAGGGCCGAGCTGCGGCAGTCGGACACGGTCGTGTCCT
GCGTTGGGGGGTTCGGGAAGACCGACGCTTACATGGGCTTGGTTAACGGC
GAAGCGAACATCAAGCTCGCGGAGAACCAAGATCTGTACAGGGCCGAGCT
GCGGCAGTCGGACACGGTCGTGTCCTGCGTTGGGGGGTTCGGGAAGACCG
ACGCTTACATGGGCTTGGTTAACGGCGAAGCGAACATCAAGCTCGCGGAG
GCCGCCGCAGATGCAGGGTGCAAGCAGTTCGTGTTTGTGTCCGTGCACGA
CTACAAGGCGCCGTCGGTGGTGAAGAAAGTGGGCTATTTTGATGGAAAGC
GGCGGACGGAGAAGGTCGTCGGGGAGCTGTTCGGCGAAAAGGCCGCCGCA
GATGCAGGGTGCAAGCAGTTCGTGTTTGTGTCCGTGCACGACTACAAGGC
GCCGTCGGTGGTGAAGAAAGTGGGCTATTTTGATGGAAAGCGGCGGACGG
AGAAGGTCGTCGGGGAGCTGTTCGGCGAAAAGGGAGCTATCCTGAAGCCC
GCGTTGATCTACGGCTCTCGCGACATCAAGCTGAACGGCCCCAAGGGAAA
GGAGCGGACGATCAACGTGCCGCTGCAGCGCGTGGGGGGCCCGCTGGCAA
AGTTGACCTCCACGGGCATCGGCAAGAGAATCGCAGGGAGCTATCCTGAA
GCCCGCGTTGATCTACGGCTCTCGCGACATCAAGCTGAACGGCCCCAAGG
GAAAGGAGCGGACGATCAACGTGCCGCTGCAGCGCGTGGGGGGCCCGCTG
GCAAAGTTGACCTCCACGGGCATCGGCAAGAGAATCGCAGGGTCTGGGCT
TCCGCTCGCAGACGTGGCGTGGACTCAGCCGCTCAGCACCAAAGAGGTGG
CAAGATCGGCGGTGAAGTGCTGCCTAGAGGGCACCGACTCTCTGGGCGGG
GGCAGGGGCAAGGACTCCGGGGATGCCGTCGTGCTCAAGGTCCAAGACAT
TGCCTCGATGGCGGCGTGAGGTCTGGGCTTCCGCTCGCAGACGTGGCGTG
GACTCAGCCGCTCAGCACCAAAGAGGTGGCAAGATCGGCGGTGAAGTGCT
GCCTAGAGGGCACCGACTCTCTGGGCGGGGGCAGGGGCAAGGACTCCGGG
GATGCCGTCGTGCTCAAGGTCCAAGACATTGCCTCGATGGCGGCGTGA
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